Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCTGCCGGACCCAATTCCGCCGACGTCAACCACTTGCTTTCCGCCACAACCACTAGCGCCTCCGCCTCATCCCTCAACCGCCACCACCACAGTCCCCCCAAGCTCACCGCCGTAGCTGCCGTCTCAAACCACTTCTCTTTCCGAGATTCCCCGAATACGGTGTCGTCCACCACCGGCTTTACCACCACCCTCGTCCAGTGCACCACCGCCTCATGA mRNA sequence ATGTCTGCCGGACCCAATTCCGCCGACGTCAACCACTTGCTTTCCGCCACAACCACTAGCGCCTCCGCCTCATCCCTCAACCGCCACCACCACAGTCCCCCCAAGCTCACCGCCGTAGCTGCCGTCTCAAACCACTTCTCTTTCCGAGATTCCCCGAATACGGTGTCGTCCACCACCGGCTTTACCACCACCCTCGTCCAGTGCACCACCGCCTCATGA Coding sequence (CDS) ATGTCTGCCGGACCCAATTCCGCCGACGTCAACCACTTGCTTTCCGCCACAACCACTAGCGCCTCCGCCTCATCCCTCAACCGCCACCACCACAGTCCCCCCAAGCTCACCGCCGTAGCTGCCGTCTCAAACCACTTCTCTTTCCGAGATTCCCCGAATACGGTGTCGTCCACCACCGGCTTTACCACCACCCTCGTCCAGTGCACCACCGCCTCATGA Protein sequence MSAGPNSADVNHLLSATTTSASASSLNRHHHSPPKLTAVAAVSNHFSFRDSPNTVSSTTGFTTTLVQCTTAS
Homology
BLAST of ClCG10G011460 vs. ExPASy TrEMBL
Match: A0A0A0KTG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003710 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.0e-23 Identity = 65/72 (90.28%), Postives = 65/72 (90.28%), Query Frame = 0
Query: 1 MSAGPNSADVNHLLSATTTSASASSLNRHHHSPPKLTAVAAVSNHFSFRDSPNTVSSTTG 60
MSA PNSADVNHLLSATTTS SASSLNRHHHSPPKLTAVAAVSNHFS R SP VSSTTG
Sbjct: 1 MSAQPNSADVNHLLSATTTSTSASSLNRHHHSPPKLTAVAAVSNHFSVRGSPYMVSSTTG 60
Query: 61 FTTTLVQCTTAS 73
FTT LVQCTTAS
Sbjct: 61 FTTALVQCTTAS 72
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KTG5 | 4.0e-23 | 90.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003710 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..32 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..31 |
Relationships
The following mRNA feature(s) are a part of this gene:
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