ClCG10G010340 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G010340
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Trypsin inhibitor 5
Location	CG_Chr10: 23041831 .. 23042118 (-)
RNA-Seq Expression	ClCG10G010340
Synteny	ClCG10G010340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGCAAGAAAGTTGGTTTTATGGGGAAAGTGCTTATTATTATAGTGCTTTTGGGGACTTCAATTTCAGCCAACAACATGAAGGCAATGGAAGTTGAAGGGAATGAAATTAGGGTAGTGGACACTATCCAAACTATTGTCTTGCCAAGAAAAATGATGAAAGATGGACTTTTCCTATTTCAATTTGGAATATGTCCCCTCATTTATATGCCTTGTAAAAAGGACTCCGATTGCCTTCAACATTGTGCTTGCAACGACAATGGTATATGCGGTCCAATAGAATGA

mRNA sequence

ATGGAGAGCAAGAAAGTTGGTTTTATGGGGAAAGTGCTTATTATTATAGTGCTTTTGGGGACTTCAATTTCAGCCAACAACATGAAGGCAATGGAAGTTGAAGGGAATGAAATTAGGGTAGTGGACACTATCCAAACTATTGTCTTGCCAAGAAAAATGATGAAAGATGGACTTTTCCTATTTCAATTTGGAATATGTCCCCTCATTTATATGCCTTGTAAAAAGGACTCCGATTGCCTTCAACATTGTGCTTGCAACGACAATGGTATATGCGGTCCAATAGAATGA

Coding sequence (CDS)

ATGGAGAGCAAGAAAGTTGGTTTTATGGGGAAAGTGCTTATTATTATAGTGCTTTTGGGGACTTCAATTTCAGCCAACAACATGAAGGCAATGGAAGTTGAAGGGAATGAAATTAGGGTAGTGGACACTATCCAAACTATTGTCTTGCCAAGAAAAATGATGAAAGATGGACTTTTCCTATTTCAATTTGGAATATGTCCCCTCATTTATATGCCTTGTAAAAAGGACTCCGATTGCCTTCAACATTGTGCTTGCAACGACAATGGTATATGCGGTCCAATAGAATGA

Protein sequence

MESKKVGFMGKVLIIIVLLGTSISANNMKAMEVEGNEIRVVDTIQTIVLPRKMMKDGLFLFQFGICPLIYMPCKKDSDCLQHCACNDNGICGPIE

Homology

[Close]

BLAST of ClCG10G010340 vs. NCBI nr
Match: KAG6576919.1 (hypothetical protein SDJN03_24493, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 55.5 bits (132), Expect = 3.0e-04
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 13  LIIIVLLGTSISANNMKAMEVEGNEIRVVDTIQTI--VLPRKMMKDGLFLFQFGICPLIY 72
           LI I+L+ T  SA    A  ++ + + +V   + I   +PRK+MK G+   +  +CP I 
Sbjct: 64  LIAILLVATLSSA----AYAIDDDSMDLVFDGRDINHGVPRKIMKWGVLNHEERVCPKIL 123

Query: 73  MPCKKDSDCLQHCACNDNGICG 93
           M CKKDSDCL  C C ++G CG
Sbjct: 124 MECKKDSDCLAECICLEHGYCG 141

[Close]

BLAST of ClCG10G010340 vs. NCBI nr
Match: KAG7014944.1 (hypothetical protein SDJN02_22575, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 55.5 bits (132), Expect = 3.0e-04
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 13  LIIIVLLGTSISANNMKAMEVEGNEIRVVDTIQTI--VLPRKMMKDGLFLFQFGICPLIY 72
           LI I+L+ T  SA    A  ++ + + +V   + I   +PRK+MK G+   +  +CP I 
Sbjct: 64  LIAILLVATLSSA----AYAIDDDSMDLVFDGRDINHGVPRKIMKWGVLNHEERVCPKIL 123

Query: 73  MPCKKDSDCLQHCACNDNGICG 93
           M CKKDSDCL  C C ++G CG
Sbjct: 124 MECKKDSDCLAECICLEHGYCG 141

[Close]

BLAST of ClCG10G010340 vs. ExPASy Swiss-Prot
Match: P34950 (Trypsin inhibitor 5 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.7e-06
Identity = 27/58 (46.55%), Postives = 31/58 (53.45%), Query Frame = 0


Query: 40 VVDTIQTIV-----LPRKMMKDGLFLFQFGICPLIYMPCKKDSDCLQHCACNDNGICG 93
          VV+ I+ I      LPRK+M         GICP I MPCK D DC+  C C  NG CG
Sbjct: 10 VVEVIELISDGGNDLPRKIMSGR----HGGICPRILMPCKTDDDCMLDCRCLSNGYCG 63

[Close]

BLAST of ClCG10G010340 vs. ExPASy Swiss-Prot
Match: P35628 (Trypsin inhibitor 4 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.3e-05
Identity = 18/28 (64.29%), Postives = 19/28 (67.86%), Query Frame = 0


Query: 65 ICPLIYMPCKKDSDCLQHCACNDNGICG 93
          ICP I MPC  DSDCL  C C +NG CG
Sbjct: 1  ICPRILMPCSSDSDCLAECICLENGFCG 28

[Close]

BLAST of ClCG10G010340 vs. ExPASy Swiss-Prot
Match: P83397 (Trypsin inhibitor 6 OS=Cyclanthera pedata OX=198836 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.3e-05
Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 0


Query: 65 ICPLIYMPCKKDSDCLQHCACNDNGICG 93
          ICP I M CKKDSDCL  C C ++G CG
Sbjct: 3  ICPRILMKCKKDSDCLAECICEEHGFCG 30

[Close]

BLAST of ClCG10G010340 vs. ExPASy Swiss-Prot
Match: P83398 (Trypsin inhibitor 7 OS=Cyclanthera pedata OX=198836 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.3e-05
Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 0


Query: 65 ICPLIYMPCKKDSDCLQHCACNDNGICG 93
          ICP I M CKKDSDCL  C C ++G CG
Sbjct: 3  ICPRILMKCKKDSDCLAECICQEHGFCG 30

[Close]

BLAST of ClCG10G010340 vs. ExPASy Swiss-Prot
Match: P26771 (Trypsin inhibitor 1 OS=Lagenaria siceraria OX=3668 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 8.2e-05
Identity = 18/27 (66.67%), Postives = 20/27 (74.07%), Query Frame = 0


Query: 66 CPLIYMPCKKDSDCLQHCACNDNGICG 93
          CP IYM CK DSDCL  C C ++GICG
Sbjct: 4  CPRIYMECKHDSDCLADCVCLEHGICG 30

The following BLAST results are available for this feature:

BLAST of ClCG10G010340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576919.1	3.0e-04	40.24	hypothetical protein SDJN03_24493, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7014944.1	3.0e-04	40.24	hypothetical protein SDJN02_22575, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of ClCG10G010340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34950	9.7e-06	46.55	Trypsin inhibitor 5 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1	[more]
P35628	6.3e-05	64.29	Trypsin inhibitor 4 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1	[more]
P83397	6.3e-05	64.29	Trypsin inhibitor 6 OS=Cyclanthera pedata OX=198836 PE=1 SV=1	[more]
P83398	6.3e-05	64.29	Trypsin inhibitor 7 OS=Cyclanthera pedata OX=198836 PE=1 SV=1	[more]
P26771	8.2e-05	66.67	Trypsin inhibitor 1 OS=Lagenaria siceraria OX=3668 PE=1 SV=2	[more]

BLAST of ClCG10G010340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of ClCG10G010340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00286	PTI_1	coord: 64..92 e-value: 3.7E-8 score: 43.1
None	No IPR available	GENE3D	4.10.75.20		coord: 50..92 e-value: 6.8E-11 score: 43.8
IPR000737	Proteinase inhibitor I7, squash	PFAM	PF00299	Squash	coord: 65..92 e-value: 5.7E-12 score: 45.4
IPR000737	Proteinase inhibitor I7, squash	PROSITE	PS00286	SQUASH_INHIBITOR	coord: 66..85
IPR000737	Proteinase inhibitor I7, squash	CDD	cd00150	PlantTI	coord: 66..92 e-value: 1.65797E-8 score: 44.2907
IPR011052	Proteinase/amylase inhibitor domain superfamily	SUPERFAMILY	57027	Plant inhibitors of proteinases and amylases	coord: 63..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G010340.1	ClCG10G010340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity
molecular_function	GO:0004866	endopeptidase inhibitor activity