ClCG10G009870 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G009870
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	DNA-directed RNA polymerase subunit beta
Location	CG_Chr10: 22402560 .. 22405767 (+)
RNA-Seq Expression	ClCG10G009870
Synteny	ClCG10G009870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGCTTTGAAGTTTCTATGCTGTTAAATGTGGTGTCATTGAGGCAAAATCCAGTGCGTCTTGCTCGCGGGGCCAGTCGATACATAAGTTCAGTTGGTTATAGGTCACTACCATCACTTTTATTATACATAGGTCTTCTGATAATGGTACTTCTTTCTATGATTATACACCTCTTCCGTTCCCTTTTTAGTTACTATACTTATTTCATGTAATCAAAACATTTGTTTGTTAAATGGGAACGATTTTTTATTTGTTTAGTCCTAAAAGATATCTAATTTAGGATTAATATCTTATTTACATGTTTTCTGTAATTTTCAGGTCTTAACCCTTTTTCTAGGATATCTCTATCATGCATCAGGTTCGTATTTGTTACTAAACTTGACGAGACAGTTGCTTAGTTATTTTAGTTGGTTAGATGCCCACACGATGAAGCAACAGGTTATTAAATCCCATTTTAGTTTCTGAACTTTTAAATTGTTTATTTTCGTTTCCGAACTTTAAAAAAGTAAACATTTTAATCTTCTTAATGTTATTTGCCAAAACTTTTTCATCAAATGGAACGTAACTTCAAATATGTAAATTAACTTGTCATAGACATGAATTAAAGTCACGTATGTTTGCCGAGGCAGGTCTTGAATGGGGCAAATGTTGATGACAAAATAGCAAGAAGGAACAAAATTGCTAGCCTTTGCGGTTATTAGTATTTGATGTTCTTAATCTGGATATATAATTTTCTTCTTCTTTTTCTTCTCATGGTAGGTGGGCAGAGAAGCAATATGGAGGCTGAGAATAAAGTTGAAGGTATTCTGTCTTTATCTTTTGAAGTCACTGAAGTTTATATAACGACTTTCCCTCATGAGTACAATGATATTGCAGCATTGCTGTACTGATAATATAATTCAACTATCAACCTTGGTTAAAATTGTGAAAATGGATTTTTGACCTTGTCTATAACCTAAATATCTGTTTTAACCATGGGATTAGTGATATTAGACTTTGTAATGCGTCTGGAATTCCTGAGATTTGAAAAAATTCCTCCACTGATAGGTGATCTATTAACAATCCGTAGCAGGGCCCAAGAAATTAAAAGGGGAAAAAAAAAAGAGGTGAAGGGAAAAAGTAGAGGATTAGACTAGAGACATATAAGATTTATTATTTCTTGTAGCTGATACAATTACTTATTTTGTTTGAACATTTTTAGAGAAAAGATACTTGAACTTGCTTAAGTTCCACAGCTGAATTTTCTTCACAGATTTAGACAGTTGGACTCTGCGATCTGAGACTTACCATGAAGATCTTTATGCATGAATGTACTGTTGTTTCGATCATTCTCATTTATAAAAATTATTTACTGATTTAGGAAGAACTTATAAGTACAGAAGTAGAGAACCTCATAAGTGTAAAAATATGTATAAATGAAGTTTTTTGAATGAAAAATTTAATAGATTTTTGGATCTGCAGGCGTATACAAACTCATACAAAAACTATCACCCTTGTTCATTGCCAAGGAAATAAGGAATCTATCATATATTTAATATTGCTACTGCATAATGGCAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAATGATACCACTTCTAAGGGAAGTATATGATGATAGCATGACTAAAGTGTTATACGTTGGCCCTGATACTTGTTTGATGATGTCCGAATTACTCTTAGACGAAGAGGATTATGAAGCTTGGGGTGTGGAACCATATGGCTCTGATGCCAGTAACTTGTATTGCTGGGATCTCATCCATAAAGGCATCATTCGTGTTGCTGATATGAAATTTTCTCTGCCTTATAGGGAAAAGTCATTTTCTCATGTTATAATTTCAGATACCTTGGAATATTTTTCTTCACGATACCTTAACAACACAATTCCTGAGTTGATGAGGGTATCTAGAGATGGTGTTATCATATTTGCTGGTAAATCCCTTATTATAGTTTTGTTTTATAGAGATTCAAATTTCAAAACGCTTGAACGGAGAGTTGAATATAACATAATTCTGATGCTTTTAATCTCAAACTACTATACTTCTCATTTTTCTCTTTTTCAATGCTATGCAGGTTATCCAGATTATCCACTTTCGGAATTTACCAGATACAAGTTCAACCGCCAGGTTAGAATTATAGAATTTGAAGTCTGTTCCTCTAGATTATGTTAGGTTCTCAAGTACAAATAAACAACACAAAACACAAAGATAAAACTGCATTGCGATATCAAAAAAAATTACAATACAACAATAGCCTTTTGAGAGAGCTATCTATATCTCTCCACCAATCTACCAAAAATAGATAATACCAAAATATGACCTCCCCTCATGAACCCTAATTCTCTCTATCTACAACCAAGACTCAACCAAGACTGCTAGCTAATTACCACTATAGCTTATTATTGTACTACTAATATTTTCAATGTATCTCCTAATAACTCTCACAAATTGTGAAGAAATTTGATTTGATTCACATAAGTTAAGGAGGCATTTGGCCCACTGACTTTATAAGTCGGTGTTAATAAGTTAACTCCACCAACTTCAACGATGTTCACTATGGAAGTTTGCACATTTGTCGATAAACTTCATCTTCCCCTCTTTTTCTCTCGCTCCCTCTAACGTTTCCTAACTCCTATTTTACCCCTACACCCCAAATTCAGGCTTCCTAATTCTAACATATTAACTCCTATTTCAGATTTCAACTCAGCACCTCAAACATCCCCTAAATGTTGAATGAACATGGACCATGACCACTCTATCACTAAATGTCACAATTTGTTCACTCACATTGCATGTTCTGAAACAAAATGAAACTACATAGAAATTATAGTAATTATAGAATATATAGTACTCATTGGGACGCAATGTTTGCCTTTCCCAGATTATCTTTAAGCTTGGTTTAGAATTTGTTTCATACTTAATAATCAATTTGCAAAATATCCTTAAGTTAGGCAATGGGTAATTGAAAATTACTAGTTTTACATGCATTGGAATTTTACCTTCAAATTAGCAATGACCTATTTGGCTTTGATTTTGTTTGTAAATTTTGCAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAGTTGAAAGGAAGTTGGAAGAAAATGAAGCTGCTAAAAAGAGGTTTAAAAAAATTCTAAGGGATATCTCATATAAACCAGCCTGCCAAATCTTCTTTCTCAAGTCAGGATGA

mRNA sequence

ATGGCCCGCTTTGAAGTTTCTATGCTGTTAAATGTGGTGTCATTGAGGCAAAATCCAGTGCGTCTTGCTCGCGGGGCCAGTCGATACATAAGTTCAGTTGGTTATAGGTCACTACCATCACTTTTATTATACATAGGTCTTCTGATAATGGTCTTAACCCTTTTTCTAGGATATCTCTATCATGCATCAGGTGGGCAGAGAAGCAATATGGAGGCTGAGAATAAAGTTGAAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAATGATACCACTTCTAAGGGAAGTATATGATGATAGCATGACTAAAGTGTTATACGTTGGCCCTGATACTTGTTTGATGATGTCCGAATTACTCTTAGACGAAGAGGATTATGAAGCTTGGGGTGTGGAACCATATGGCTCTGATGCCAGTAACTTGTATTGCTGGGATCTCATCCATAAAGGCATCATTCGTGTTGCTGATATGAAATTTTCTCTGCCTTATAGGGAAAAGTCATTTTCTCATGTTATAATTTCAGATACCTTGGAATATTTTTCTTCACGATACCTTAACAACACAATTCCTGAGTTGATGAGGGTATCTAGAGATGGTGTTATCATATTTGCTGGTTATCCAGATTATCCACTTTCGGAATTTACCAGATACAAGTTCAACCGCCAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAGTTGAAAGGAAGTTGGAAGAAAATGAAGCTGCTAAAAAGAGGTTTAAAAAAATTCTAAGGGATATCTCATATAAACCAGCCTGCCAAATCTTCTTTCTCAAGTCAGGATGA

Coding sequence (CDS)

ATGGCCCGCTTTGAAGTTTCTATGCTGTTAAATGTGGTGTCATTGAGGCAAAATCCAGTGCGTCTTGCTCGCGGGGCCAGTCGATACATAAGTTCAGTTGGTTATAGGTCACTACCATCACTTTTATTATACATAGGTCTTCTGATAATGGTCTTAACCCTTTTTCTAGGATATCTCTATCATGCATCAGGTGGGCAGAGAAGCAATATGGAGGCTGAGAATAAAGTTGAAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAATGATACCACTTCTAAGGGAAGTATATGATGATAGCATGACTAAAGTGTTATACGTTGGCCCTGATACTTGTTTGATGATGTCCGAATTACTCTTAGACGAAGAGGATTATGAAGCTTGGGGTGTGGAACCATATGGCTCTGATGCCAGTAACTTGTATTGCTGGGATCTCATCCATAAAGGCATCATTCGTGTTGCTGATATGAAATTTTCTCTGCCTTATAGGGAAAAGTCATTTTCTCATGTTATAATTTCAGATACCTTGGAATATTTTTCTTCACGATACCTTAACAACACAATTCCTGAGTTGATGAGGGTATCTAGAGATGGTGTTATCATATTTGCTGGTTATCCAGATTATCCACTTTCGGAATTTACCAGATACAAGTTCAACCGCCAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAGTTGAAAGGAAGTTGGAAGAAAATGAAGCTGCTAAAAAGAGGTTTAAAAAAATTCTAAGGGATATCTCATATAAACCAGCCTGCCAAATCTTCTTTCTCAAGTCAGGATGA

Protein sequence

MARFEVSMLLNVVSLRQNPVRLARGASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGYLYHASGGQRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSELLLDEEDYEAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVERKLEENEAAKKRFKKILRDISYKPACQIFFLKSG

Homology

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BLAST of ClCG10G009870 vs. NCBI nr
Match: XP_038905892.1 (probable pectin methylesterase CGR3 [Benincasa hispida])

HSP 1 Score: 471.1 bits (1211), Expect = 6.5e-129
Identity = 235/272 (86.40%), Postives = 251/272 (92.28%), Query Frame = 0


Query: 1   MARFEVSMLLNVVSLRQNPVR--LARGASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGY 60
           M  FEVS +LN V LRQNPVR  + RGASRYISS  YRSL SLLL IGLLIMV+TL LGY
Sbjct: 1   MDSFEVS-ILNTVPLRQNPVRTYVVRGASRYISSDRYRSLSSLLLLIGLLIMVITLALGY 60

Query: 61  LYHASGGQRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSEL 120
           LYHASGGQ S++EA+N+VEG TFC+ EVQTMIPLLREVYDDSMTKVLYVGPDTC MMSEL
Sbjct: 61  LYHASGGQTSHLEADNEVEGQTFCSLEVQTMIPLLREVYDDSMTKVLYVGPDTCSMMSEL 120

Query: 121 LLDEEDYEAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTLEY 180
           L+DEE+YEAWGVEPYGSD S+ YCWDLIHKGIIRVADMKFSLPYRE SFSHVIISDTLEY
Sbjct: 121 LIDEEEYEAWGVEPYGSDGSDFYCWDLIHKGIIRVADMKFSLPYRENSFSHVIISDTLEY 180

Query: 181 FSSRYLNNTIPELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVERK 240
           FS RYLN+TIPELMRVSRDGVIIFAGYPDYP++EFTRYKFNR+AKLRSPSWWKRYLV+RK
Sbjct: 181 FSPRYLNSTIPELMRVSRDGVIIFAGYPDYPITEFTRYKFNREAKLRSPSWWKRYLVQRK 240

Query: 241 LEENEAAKKRFKKILRDISYKPACQIFFLKSG 271
           LEENEAAKKRFKKILRDISYKPACQIFFLKSG
Sbjct: 241 LEENEAAKKRFKKILRDISYKPACQIFFLKSG 271

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BLAST of ClCG10G009870 vs. NCBI nr
Match: XP_008454502.1 (PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo])

HSP 1 Score: 448.4 bits (1152), Expect = 4.5e-122
Identity = 226/274 (82.48%), Postives = 250/274 (91.24%), Query Frame = 0


Query: 1   MARFEVSMLLNVVSLRQNPVR--LARGASRYISSVGYRSLPSLLLYIGLLI-MVLTLFLG 60
           M RFEVS LLN +S+RQN VR  +ARGASRYISSV YRSL SLLLYIGLLI MV+TLFLG
Sbjct: 1   MGRFEVSTLLNGISVRQNLVRPYVARGASRYISSVRYRSLSSLLLYIGLLIVMVITLFLG 60

Query: 61  YLYHASGGQRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSE 120
           Y YHASGG+ SNME  NKVEGHTFCTSEVQT IPLLREVYDDSMTKVLYVGPDTC M+S+
Sbjct: 61  YFYHASGGEGSNMEDVNKVEGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISK 120

Query: 121 LLL-DEEDYEAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTL 180
           LL+ DE+DYEAWG+EPYGSD+S   CWDLIHKGIIRVAD+KF+LPY E SFSHVIISDTL
Sbjct: 121 LLIDDEDDYEAWGLEPYGSDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTL 180

Query: 181 EYFSSRYLNNTIPELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVE 240
           EYFSSRYLN+TI ELMRVSR+GVIIFAGYPDYP+SEFTR+KF+RQAKLRSPSWWKRYL +
Sbjct: 181 EYFSSRYLNSTIFELMRVSREGVIIFAGYPDYPISEFTRFKFDRQAKLRSPSWWKRYLNQ 240

Query: 241 RKLEENEAAKKRFKKILRDISYKPACQIFFLKSG 271
           ++LEENE A+KRFKKILR+ISYKPACQI+FLKSG
Sbjct: 241 KELEENEVARKRFKKILREISYKPACQIYFLKSG 274

[Close]

BLAST of ClCG10G009870 vs. NCBI nr
Match: XP_011654354.1 (probable pectin methylesterase CGR3 [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 1.8e-115
Identity = 215/274 (78.47%), Postives = 242/274 (88.32%), Query Frame = 0


Query: 1   MARFEVSMLLNVVSLRQNPVR--LARGASRYISSVGYRSLPSLLLYIGLLI-MVLTLFLG 60
           M   EVS +LN +S+RQNPVR  +AR ASRYISSV  RSL SLLL+IGLLI MV TLFLG
Sbjct: 1   MGCIEVSTVLNGISVRQNPVRPCVARRASRYISSVRCRSLSSLLLFIGLLIVMVTTLFLG 60

Query: 61  YLYHASGGQRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSE 120
           Y YHASG + S ME EN+VEGHTFCTSEVQT IPLLREVYDD+MTKVLYVGPDTC M+S+
Sbjct: 61  YFYHASGEEGSTMEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISK 120

Query: 121 LLL-DEEDYEAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTL 180
           LL+ DE+DYEAWGVEPY  D+S  +CWDLIHKGIIRVAD+KF LPY + SFSHVIISDTL
Sbjct: 121 LLIVDEDDYEAWGVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTL 180

Query: 181 EYFSSRYLNNTIPELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVE 240
           EYFSSRYLN+TI ELMRVSR+GVIIFAG+PDYP+SEFTRYKF+ +AKLRSPSWWKRYL +
Sbjct: 181 EYFSSRYLNSTIFELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQ 240

Query: 241 RKLEENEAAKKRFKKILRDISYKPACQIFFLKSG 271
           + LEENEAA+KRFKKILR+ISYKPACQ+FFLKSG
Sbjct: 241 KNLEENEAARKRFKKILREISYKPACQVFFLKSG 274

[Close]

BLAST of ClCG10G009870 vs. NCBI nr
Match: XP_022149264.1 (uncharacterized protein At3g49720-like [Momordica charantia] >XP_022149265.1 uncharacterized protein At3g49720-like [Momordica charantia])

HSP 1 Score: 368.2 bits (944), Expect = 5.9e-98
Identity = 186/271 (68.63%), Postives = 219/271 (80.81%), Query Frame = 0


Query: 1   MARFEVSMLLNVVSLRQNPV--RLARGASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGY 60
           M  FEVSMLLNV+S+R++ V    ARG SRYI+SV YRSLPSL+LY GLL M   L LGY
Sbjct: 1   MGGFEVSMLLNVMSIRKSSVLCYAARGVSRYINSVRYRSLPSLILYTGLLTMATVLSLGY 60

Query: 61  LYHASGGQRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSEL 120
           LYH +  Q SN+E  N  EGH FCT EV+  +PLLREVYDD M KVLYVGPDTC ++S  
Sbjct: 61  LYHVAVWQASNIEDVNTFEGHGFCTPEVEITMPLLREVYDDIMNKVLYVGPDTCSLVSG- 120

Query: 121 LLDEEDYEAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTLEY 180
            LDEEDYEAWGV+P+G DA++  C DL+ +GI+RVAD+KF LPYR+ SFSHV++SDTLEY
Sbjct: 121 FLDEEDYEAWGVDPFGFDANDSDCRDLVQQGIVRVADIKFPLPYRDSSFSHVVVSDTLEY 180

Query: 181 FSSRYLNNTIPELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVERK 240
            SSRYLN+T+ EL RVS +GVII+AGYP +P+SEFTRY  +RQAK RSPSWW+RYLV+RK
Sbjct: 181 LSSRYLNSTLAELTRVSSEGVIIYAGYPGFPVSEFTRY--SRQAKFRSPSWWRRYLVQRK 240

Query: 241 LEENEAAKKRFKKILRDISYKPACQIFFLKS 270
           LEEN AAKKR KKIL+DISYKPACQI  LKS
Sbjct: 241 LEENVAAKKRLKKILKDISYKPACQILLLKS 268

[Close]

BLAST of ClCG10G009870 vs. NCBI nr
Match: KAE8649381.1 (hypothetical protein Csa_011838 [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 2.6e-93
Identity = 166/202 (82.18%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 70  MEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSELLL-DEEDYEAW 129
           ME EN+VEGHTFCTSEVQT IPLLREVYDD+MTKVLYVGPDTC M+S+LL+ DE+DYEAW
Sbjct: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60

Query: 130 GVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTLEYFSSRYLNNTI 189
           GVEPY  D+S  +CWDLIHKGIIRVAD+KF LPY + SFSHVIISDTLEYFSSRYLN+TI
Sbjct: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120

Query: 190 PELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVERKLEENEAAKKR 249
            ELMRVSR+GVIIFAG+PDYP+SEFTRYKF+ +AKLRSPSWWKRYL ++ LEENEAA+KR
Sbjct: 121 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 180

Query: 250 FKKILRDISYKPACQIFFLKSG 271
           FKKILR+ISYKPACQ+FFLKSG
Sbjct: 181 FKKILREISYKPACQVFFLKSG 202

[Close]

BLAST of ClCG10G009870 vs. ExPASy Swiss-Prot
Match: Q0WPN7 (Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 8.7e-60
Identity = 120/245 (48.98%), Postives = 165/245 (67.35%), Query Frame = 0


Query: 25  GASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGYLYHASGGQRSNMEAENKVEGHTFCTS 84
           G+  ++ ++  +S  S LL + L+++   L +GY Y   G  +S  E  +K+ G   CT+
Sbjct: 13  GSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSIREV-SKITGDYSCTA 72

Query: 85  EVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSELLLDEEDYEAWGVEPYGSDASNLYCWD 144
           EVQ  IP+L+  Y DSM KVL+VGP+TC ++S  LL+EE+ EAWGVEPY  + ++  C  
Sbjct: 73  EVQRAIPILKSAYGDSMRKVLHVGPETCSVVSS-LLNEEETEAWGVEPYDVEDADSNCKS 132

Query: 145 LIHKGIIRVADMKFSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG 204
           L+HKG++RVAD+KF LPYR KSFS VI+SD L+Y S RYLN T+PEL RV+ DGV++ AG
Sbjct: 133 LLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARVASDGVVLLAG 192

Query: 205 YPDYPLSEFTRY-KFNRQAKLRSPSWWKRYLVERKLEENEAAKKRFKKILRDISYKPACQ 264
            P    ++     KF R AK+RS SWW R+  +  LEENEAA K+F++     SYKPACQ
Sbjct: 193 NPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAASKSSYKPACQ 252

Query: 265 IFFLK 269
           +F LK
Sbjct: 253 VFHLK 255

[Close]

BLAST of ClCG10G009870 vs. ExPASy Swiss-Prot
Match: Q9M2Y6 (Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-58
Identity = 118/245 (48.16%), Postives = 163/245 (66.53%), Query Frame = 0


Query: 25  GASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGYLYHASGGQRSNMEAENKVEGHTFCTS 84
           G+  +  ++  +S  S LL I L+++   L +GY Y   G  +S  E  +KV G   CT+
Sbjct: 16  GSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIKEV-SKVTGDYSCTA 75

Query: 85  EVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSELLLDEEDYEAWGVEPYGSDASNLYCWD 144
           EVQ  IP+L++ Y D M KVL+VGPDTC ++S  LL EE+ EAWGVEPY  + ++ +C  
Sbjct: 76  EVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSS-LLKEEETEAWGVEPYDIEDADSHCKS 135

Query: 145 LIHKGIIRVADMKFSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG 204
            + KG++RVAD+KF LPYR KSFS VI+SD L+Y S +YLN T+PEL RV+ DGV++FAG
Sbjct: 136 FVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVASDGVVLFAG 195

Query: 205 YPDYPLSEFTRY-KFNRQAKLRSPSWWKRYLVERKLEENEAAKKRFKKILRDISYKPACQ 264
            P    ++     KF R AK+RS SWW R+ V+  LEEN+A  K+F++ +    YKPACQ
Sbjct: 196 LPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQ 255

Query: 265 IFFLK 269
           +F LK
Sbjct: 256 VFHLK 258

[Close]

BLAST of ClCG10G009870 vs. ExPASy TrEMBL
Match: A0A1S3BYV5 (uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103494900 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.2e-122
Identity = 226/274 (82.48%), Postives = 250/274 (91.24%), Query Frame = 0


Query: 1   MARFEVSMLLNVVSLRQNPVR--LARGASRYISSVGYRSLPSLLLYIGLLI-MVLTLFLG 60
           M RFEVS LLN +S+RQN VR  +ARGASRYISSV YRSL SLLLYIGLLI MV+TLFLG
Sbjct: 1   MGRFEVSTLLNGISVRQNLVRPYVARGASRYISSVRYRSLSSLLLYIGLLIVMVITLFLG 60

Query: 61  YLYHASGGQRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSE 120
           Y YHASGG+ SNME  NKVEGHTFCTSEVQT IPLLREVYDDSMTKVLYVGPDTC M+S+
Sbjct: 61  YFYHASGGEGSNMEDVNKVEGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISK 120

Query: 121 LLL-DEEDYEAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTL 180
           LL+ DE+DYEAWG+EPYGSD+S   CWDLIHKGIIRVAD+KF+LPY E SFSHVIISDTL
Sbjct: 121 LLIDDEDDYEAWGLEPYGSDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTL 180

Query: 181 EYFSSRYLNNTIPELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVE 240
           EYFSSRYLN+TI ELMRVSR+GVIIFAGYPDYP+SEFTR+KF+RQAKLRSPSWWKRYL +
Sbjct: 181 EYFSSRYLNSTIFELMRVSREGVIIFAGYPDYPISEFTRFKFDRQAKLRSPSWWKRYLNQ 240

Query: 241 RKLEENEAAKKRFKKILRDISYKPACQIFFLKSG 271
           ++LEENE A+KRFKKILR+ISYKPACQI+FLKSG
Sbjct: 241 KELEENEVARKRFKKILREISYKPACQIYFLKSG 274

[Close]

BLAST of ClCG10G009870 vs. ExPASy TrEMBL
Match: A0A6J1D594 (uncharacterized protein At3g49720-like OS=Momordica charantia OX=3673 GN=LOC111017728 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.9e-98
Identity = 186/271 (68.63%), Postives = 219/271 (80.81%), Query Frame = 0


Query: 1   MARFEVSMLLNVVSLRQNPV--RLARGASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGY 60
           M  FEVSMLLNV+S+R++ V    ARG SRYI+SV YRSLPSL+LY GLL M   L LGY
Sbjct: 1   MGGFEVSMLLNVMSIRKSSVLCYAARGVSRYINSVRYRSLPSLILYTGLLTMATVLSLGY 60

Query: 61  LYHASGGQRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSEL 120
           LYH +  Q SN+E  N  EGH FCT EV+  +PLLREVYDD M KVLYVGPDTC ++S  
Sbjct: 61  LYHVAVWQASNIEDVNTFEGHGFCTPEVEITMPLLREVYDDIMNKVLYVGPDTCSLVSG- 120

Query: 121 LLDEEDYEAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTLEY 180
            LDEEDYEAWGV+P+G DA++  C DL+ +GI+RVAD+KF LPYR+ SFSHV++SDTLEY
Sbjct: 121 FLDEEDYEAWGVDPFGFDANDSDCRDLVQQGIVRVADIKFPLPYRDSSFSHVVVSDTLEY 180

Query: 181 FSSRYLNNTIPELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVERK 240
            SSRYLN+T+ EL RVS +GVII+AGYP +P+SEFTRY  +RQAK RSPSWW+RYLV+RK
Sbjct: 181 LSSRYLNSTLAELTRVSSEGVIIYAGYPGFPVSEFTRY--SRQAKFRSPSWWRRYLVQRK 240

Query: 241 LEENEAAKKRFKKILRDISYKPACQIFFLKS 270
           LEEN AAKKR KKIL+DISYKPACQI  LKS
Sbjct: 241 LEENVAAKKRLKKILKDISYKPACQILLLKS 268

[Close]

BLAST of ClCG10G009870 vs. ExPASy TrEMBL
Match: A0A6J1K5Y9 (uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC111491988 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 5.8e-91
Identity = 170/271 (62.73%), Postives = 217/271 (80.07%), Query Frame = 0


Query: 1   MARFEVSMLLNVVSLRQNPVR--LARGASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGY 60
           M+ FEVSM + +V +RQN V   +ARGA++YI+     SL S+L ++ LL M + +F+GY
Sbjct: 1   MSGFEVSMPMTMVLMRQNRVNRYVARGANQYIN-----SLLSILSFLCLLTMAI-VFIGY 60

Query: 61  LYHASGGQRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSEL 120
           L+HASGGQ S  + EN VEGHTFCTSEVQT+I LL+EVYD +M KVLYVGPDT  +M EL
Sbjct: 61  LHHASGGQGSITDVENDVEGHTFCTSEVQTIITLLKEVYDYNMNKVLYVGPDTGSVMPEL 120

Query: 121 LLDEEDYEAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTLEY 180
           L D++DY  WG++PY +D ++  CWDLI + I+ V+DMKF LPYREKSFSHVI+SDTLEY
Sbjct: 121 LEDKDDYVDWGMDPYDTDGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLEY 180

Query: 181 FSSRYLNNTIPELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVERK 240
            SSRYLN TIPE MRVSRDG++IFAG+PD+P+S+F R ++NRQAKLRSPSWWK YL +RK
Sbjct: 181 MSSRYLNETIPEFMRVSRDGIVIFAGHPDFPVSKFNRSRYNRQAKLRSPSWWKMYLAQRK 240

Query: 241 LEENEAAKKRFKKILRDISYKPACQIFFLKS 270
            +E+ AAK+R   +L+DIS++PACQIF LKS
Sbjct: 241 FKEDAAAKERLNNMLKDISFEPACQIFLLKS 265

[Close]

BLAST of ClCG10G009870 vs. ExPASy TrEMBL
Match: A0A6J1FVH2 (uncharacterized protein At3g49720-like OS=Cucurbita moschata OX=3662 GN=LOC111447239 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 9.3e-89
Identity = 167/271 (61.62%), Postives = 213/271 (78.60%), Query Frame = 0


Query: 1   MARFEVSMLLNVVSLRQNPVR--LARGASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGY 60
           M+ FEVSM + ++ +RQN V    ARGA++YI+     SL S+L ++ LL M + +F+GY
Sbjct: 1   MSGFEVSMPMTMMLMRQNRVNRYAARGANQYIN-----SLLSILSFLCLLTMAI-VFIGY 60

Query: 61  LYHASGGQRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSEL 120
           L+HASGGQ S  + EN VEG TFCTSEVQT I LL+EVYD +M KVLYVGPDT  +M EL
Sbjct: 61  LHHASGGQGSITDVENDVEGDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPEL 120

Query: 121 LLDEEDYEAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTLEY 180
           L D++DY  WG++PY ++ ++  CWDLI + I+ V+DMKF LPYREKSFSHVI+SDTLEY
Sbjct: 121 LEDKDDYVDWGMDPYDTEGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLEY 180

Query: 181 FSSRYLNNTIPELMRVSRDGVIIFAGYPDYPLSEFTRYKFNRQAKLRSPSWWKRYLVERK 240
            SSRYLN TIPE MRVSRDG++IFAG+PD+P+S+F R ++NRQAKLRSPSWWK YL +RK
Sbjct: 181 MSSRYLNETIPEFMRVSRDGIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRK 240

Query: 241 LEENEAAKKRFKKILRDISYKPACQIFFLKS 270
            EE+ AAK+R   +L+DIS++P CQIF LKS
Sbjct: 241 FEEDAAAKERLNNMLKDISFEPVCQIFLLKS 265

[Close]

BLAST of ClCG10G009870 vs. ExPASy TrEMBL
Match: A0A218VWW2 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr028476 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 6.9e-68
Identity = 139/265 (52.45%), Postives = 183/265 (69.06%), Query Frame = 0


Query: 11  NVVSLRQNPVRLAR-----GASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGYLYHASGG 70
           +++++ + P  LAR     G+  ++ SV  ++  S LL IGLL++   L +GYLY  SGG
Sbjct: 78  HLLNMSRRPASLARRFADGGSIPFVGSVQSKTRSSPLLSIGLLVVGAILLVGYLYSNSGG 137

Query: 71  QRSNMEAENKVEGHTFCTSEVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSELLLDEEDY 130
             S  EA +K+EG   CT E+Q  IP+L++ Y DSM KVL+VGPDTC ++S+ LL EED 
Sbjct: 138 SSSYREAVSKIEGSVSCTLELQRAIPVLKKAYGDSMLKVLHVGPDTCSVVSQ-LLKEEDT 197

Query: 131 EAWGVEPYGSDASNLYCWDLIHKGIIRVADMKFSLPYREKSFSHVIISDTLEYFSSRYLN 190
           EAWGVEPY  D ++  C  L+ KG++RVAD+KF LPYR KSFS VI+SD L+Y S RYLN
Sbjct: 198 EAWGVEPYDLDDADTTCKSLVRKGMVRVADIKFPLPYRAKSFSLVIVSDALDYLSPRYLN 257

Query: 191 NTIPELMRVSRDGVIIFAGYPDYPLSEFTRY-KFNRQAKLRSPSWWKRYLVERKLEENEA 250
            T+PEL RVS +GV++FAGYP    ++     KF R AKLRS SWW RY  + K+EENEA
Sbjct: 258 KTLPELARVSSNGVVVFAGYPGQQRAKVAELSKFGRPAKLRSSSWWIRYFFQTKIEENEA 317

Query: 251 AKKRFKKILRDISYKPACQIFFLKS 270
           A K+F++     SYKPACQ+F LKS
Sbjct: 318 AAKKFEQAATKRSYKPACQVFHLKS 341

[Close]

BLAST of ClCG10G009870 vs. TAIR 10
Match: AT5G65810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 231.9 bits (590), Expect = 6.2e-61
Identity = 120/245 (48.98%), Postives = 165/245 (67.35%), Query Frame = 0


Query: 25  GASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGYLYHASGGQRSNMEAENKVEGHTFCTS 84
           G+  ++ ++  +S  S LL + L+++   L +GY Y   G  +S  E  +K+ G   CT+
Sbjct: 13  GSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSIREV-SKITGDYSCTA 72

Query: 85  EVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSELLLDEEDYEAWGVEPYGSDASNLYCWD 144
           EVQ  IP+L+  Y DSM KVL+VGP+TC ++S  LL+EE+ EAWGVEPY  + ++  C  
Sbjct: 73  EVQRAIPILKSAYGDSMRKVLHVGPETCSVVSS-LLNEEETEAWGVEPYDVEDADSNCKS 132

Query: 145 LIHKGIIRVADMKFSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG 204
           L+HKG++RVAD+KF LPYR KSFS VI+SD L+Y S RYLN T+PEL RV+ DGV++ AG
Sbjct: 133 LLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARVASDGVVLLAG 192

Query: 205 YPDYPLSEFTRY-KFNRQAKLRSPSWWKRYLVERKLEENEAAKKRFKKILRDISYKPACQ 264
            P    ++     KF R AK+RS SWW R+  +  LEENEAA K+F++     SYKPACQ
Sbjct: 193 NPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAASKSSYKPACQ 252

Query: 265 IFFLK 269
           +F LK
Sbjct: 253 VFHLK 255

[Close]

BLAST of ClCG10G009870 vs. TAIR 10
Match: AT3G49720.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-59
Identity = 118/245 (48.16%), Postives = 163/245 (66.53%), Query Frame = 0


Query: 25  GASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGYLYHASGGQRSNMEAENKVEGHTFCTS 84
           G+  +  ++  +S  S LL I L+++   L +GY Y   G  +S  E  +KV G   CT+
Sbjct: 16  GSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIKEV-SKVTGDYSCTA 75

Query: 85  EVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSELLLDEEDYEAWGVEPYGSDASNLYCWD 144
           EVQ  IP+L++ Y D M KVL+VGPDTC ++S  LL EE+ EAWGVEPY  + ++ +C  
Sbjct: 76  EVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSS-LLKEEETEAWGVEPYDIEDADSHCKS 135

Query: 145 LIHKGIIRVADMKFSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG 204
            + KG++RVAD+KF LPYR KSFS VI+SD L+Y S +YLN T+PEL RV+ DGV++FAG
Sbjct: 136 FVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVASDGVVLFAG 195

Query: 205 YPDYPLSEFTRY-KFNRQAKLRSPSWWKRYLVERKLEENEAAKKRFKKILRDISYKPACQ 264
            P    ++     KF R AK+RS SWW R+ V+  LEEN+A  K+F++ +    YKPACQ
Sbjct: 196 LPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQ 255

Query: 265 IFFLK 269
           +F LK
Sbjct: 256 VFHLK 258

[Close]

BLAST of ClCG10G009870 vs. TAIR 10
Match: AT3G49720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-59
Identity = 118/245 (48.16%), Postives = 163/245 (66.53%), Query Frame = 0


Query: 25  GASRYISSVGYRSLPSLLLYIGLLIMVLTLFLGYLYHASGGQRSNMEAENKVEGHTFCTS 84
           G+  +  ++  +S  S LL I L+++   L +GY Y   G  +S  E  +KV G   CT+
Sbjct: 16  GSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIKEV-SKVTGDYSCTA 75

Query: 85  EVQTMIPLLREVYDDSMTKVLYVGPDTCLMMSELLLDEEDYEAWGVEPYGSDASNLYCWD 144
           EVQ  IP+L++ Y D M KVL+VGPDTC ++S  LL EE+ EAWGVEPY  + ++ +C  
Sbjct: 76  EVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSS-LLKEEETEAWGVEPYDIEDADSHCKS 135

Query: 145 LIHKGIIRVADMKFSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG 204
            + KG++RVAD+KF LPYR KSFS VI+SD L+Y S +YLN T+PEL RV+ DGV++FAG
Sbjct: 136 FVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVASDGVVLFAG 195

Query: 205 YPDYPLSEFTRY-KFNRQAKLRSPSWWKRYLVERKLEENEAAKKRFKKILRDISYKPACQ 264
            P    ++     KF R AK+RS SWW R+ V+  LEEN+A  K+F++ +    YKPACQ
Sbjct: 196 LPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQ 255

Query: 265 IFFLK 269
           +F LK
Sbjct: 256 VFHLK 258

The following BLAST results are available for this feature:

BLAST of ClCG10G009870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905892.1	6.5e-129	86.40	probable pectin methylesterase CGR3 [Benincasa hispida]	[more]
XP_008454502.1	4.5e-122	82.48	PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo]	[more]
XP_011654354.1	1.8e-115	78.47	probable pectin methylesterase CGR3 [Cucumis sativus]	[more]
XP_022149264.1	5.9e-98	68.63	uncharacterized protein At3g49720-like [Momordica charantia] >XP_022149265.1 unc...	[more]
KAE8649381.1	2.6e-93	82.18	hypothetical protein Csa_011838 [Cucumis sativus]	[more]

BLAST of ClCG10G009870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WPN7	8.7e-60	48.98	Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2...	[more]
Q9M2Y6	1.6e-58	48.16	Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2...	[more]

BLAST of ClCG10G009870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BYV5	2.2e-122	82.48	uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103494900 P...	[more]
A0A6J1D594	2.9e-98	68.63	uncharacterized protein At3g49720-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1K5Y9	5.8e-91	62.73	uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC1114919...	[more]
A0A6J1FVH2	9.3e-89	61.62	uncharacterized protein At3g49720-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A218VWW2	6.9e-68	52.45	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr028476 PE=4 SV=1	[more]

BLAST of ClCG10G009870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65810.1	6.2e-61	48.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G49720.1	1.2e-59	48.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G49720.2	1.2e-59	48.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 235..255
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 74..262 e-value: 3.9E-7 score: 31.6
None	No IPR available	PANTHER	PTHR34208:SF10	PECTIN METHYLESTERASE CGR3-RELATED	coord: 24..269
IPR044689	Pectin methyltransferase CGR2/3	PANTHER	PTHR34208	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 24..269
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 150..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G009870.2	ClCG10G009870.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045488	pectin metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity