Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGAAGCATATGCTATGCTCTTTGGTTTTCAACAAGTGCATGAATGGGGCTTTTTTGTGTTTTTTATTGAATTAGATTCTCAAATCCTTGTTAATGCTATCCATGAGGGTAATCTTAATGGATCTCCTTATGGAGTGATTATTGAGGAAATTAGAGAGTGGATGACAAAAAGTAATTCAGTTGGGATAAATTTTATCCCGAGGGGTGAGAATGGTGTGGCTTACAAGTTAGCTGAGTGA
ATGACTGAAGCATATGCTATGCTCTTTGGTTTTCAACAAGTGCATGAATGGGGCTTTTTTGTGTTTTTTATTGAATTAGATTCTCAAATCCTTGTTAATGCTATCCATGAGGGTAATCTTAATGGATCTCCTTATGGAGTGATTATTGAGGAAATTAGAGAGTGGATGACAAAAAGTAATTCAGTTGGGATAAATTTTATCCCGAGGGGTGAGAATGGTGTGGCTTACAAGTTAGCTGAGTGA
ATGACTGAAGCATATGCTATGCTCTTTGGTTTTCAACAAGTGCATGAATGGGGCTTTTTTGTGTTTTTTATTGAATTAGATTCTCAAATCCTTGTTAATGCTATCCATGAGGGTAATCTTAATGGATCTCCTTATGGAGTGATTATTGAGGAAATTAGAGAGTGGATGACAAAAAGTAATTCAGTTGGGATAAATTTTATCCCGAGGGGTGAGAATGGTGTGGCTTACAAGTTAGCTGAGTGA
MTEAYAMLFGFQQVHEWGFFVFFIELDSQILVNAIHEGNLNGSPYGVIIEEIREWMTKSNSVGINFIPRGENGVAYKLAE
Homology
BLAST of ClCG10G007695 vs. NCBI nr
Match:
XP_024177931.1 (uncharacterized protein LOC112183838 [Rosa chinensis])
HSP 1 Score: 53.9 bits (128), Expect = 7.3e-04
Identity = 26/79 (32.91%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of ClCG10G007695 vs. NCBI nr
Match:
XP_042941317.1 (uncharacterized protein LOC122275981 [Carya illinoinensis])
HSP 1 Score: 53.9 bits (128), Expect = 7.3e-04
Identity = 25/65 (38.46%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of ClCG10G007695 vs. NCBI nr
Match:
XP_042958055.1 (uncharacterized protein LOC122293570 [Carya illinoinensis])
HSP 1 Score: 53.9 bits (128), Expect = 7.3e-04
Identity = 25/65 (38.46%), Postives = 42/65 (64.62%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_024177931.1 7.3e-04 32.91 uncharacterized protein LOC112183838 [Rosa chinensis] [more] XP_042941317.1 7.3e-04 38.46 uncharacterized protein LOC122275981 [Carya illinoinensis] [more] XP_042958055.1 7.3e-04 38.46 uncharacterized protein LOC122293570 [Carya illinoinensis] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
A T G A C T G A A G C A T A T G C T A T G C T C T T T G G T T T T C A A C A A G T G C A T G A A T G G G G C T T T T T T G T G T T T T T T A T T G A A T T A G A T T C T C A A A T C C T T G T T A A T G C T A T C C A T G A G G G T A A T C T T A A T G G A T C T C C T T A T G G A G T G A T T A T T G A G G A A A T T A G A G A G T G G A T G A C A A A A A G T A A T T C A G T T G G G A T A A A T T T T A T C C C G A G G G G T G A G A A T G G T G T G G C T T A C A A G T T A G C T G A G T G A 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 1.5E-6 / Score = 30.2 Expect = 8.0E-12 / Score = 45.1 Expect = 3.09446E-12 / Score = 55.398 Score = Sequence G3DSA:3.30.420.10 PF13456 cd06222 SSF53098
IPR Term IPR Description Source Source Term Source Description Alignment
IPR036397 Ribonuclease H superfamily GENE3D 3.30.420.10 coord: 1..80 IPR002156 Ribonuclease H domain PFAM PF13456 RVT_3 coord: 2..79 IPR044730 Ribonuclease H-like domain, plant type CDD cd06222 RNase_H_like coord: 1..79 IPR012337 Ribonuclease H-like superfamily SUPERFAMILY 53098 Ribonuclease H-like coord: 3..79
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0003676 nucleic acid binding
molecular_function
GO:0004523 RNA-DNA hybrid ribonuclease activity
