ClCG10G007620 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G007620
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr10: 11477767 .. 11479433 (+)
RNA-Seq Expression	ClCG10G007620
Synteny	ClCG10G007620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTCTCACCCATACAAATCAAAGGACAATCCTTCGTGGACAAGAGTTCATAATATACTCGGGGTTAAGACTAAGTTGCCTAGGATGCTATTGAAATAGAAATCTAACTAGTCAATGGAGTTACATCTAGTGATTACTATTTCATGGTTCGGTCTTATGCAAACTCATTACATAAGAGCTCCCACTCACATGTCATCTACACGAATATGTTAGATCATTGCGCTTGTATCAAATACAAAGTGGGTCGTATCCATAGTGTCACCAGGATAAGGTACCCAGCCTTATCCCTATACTATAGACCCTTTAGACTGTATCTTGAACATTGATCTCTGTATGTCCCCACATACAGTTCAAGACTCATAAAACAGCCTAGGATGTTTGTTAGTTTATTGGATTTAGAGTTATTAAGACAAAAAAAACAAAAACAATCAATAACGTTTATTGAAGTAACACATCAACAACTCTTTATTAATGATTTAATGACGGTCAAATAATTACATTTACAATCTACGAGTTTTAGGGCATAAAACCCAACAAATCAACCTTTCCTCGGATCAAGACCTCCTACTGCTCGTGGCACTGAGGAAGTGGGTGCTAACATCTTTGAAGGAGAGGAGGAGGTCAACTATGTGCGTTCCCTAAACAATTGGGTTACCCACATTTTGGGCAGATTATGAGACCCTACTGAGCCTTGCATTTCAGATGCAAGGAACAAGACGACATCCCCTATATGTGCTGAAGGAAGTCAGCTAGAAAAATAGACGGGTAATAAGTAAGGCGATGAGGCCACTCCTAAAAGAGAAGGCCACAGAGGAGACATTGGGGTCCATCGCTGAAAAAGAGTCTGATCACAGCGAGGAGGAAATGAGCAGGGAATGTGAACTGCAAGGGTCTTTCCGTACGACAACGGGCCTTAAAGACCAAACCCAGTGGACTCTAATGATTGGCCCATTGAGTAGTTTGTGGCCGCAGAAAAGAGCTTATGAATTTAACGATGAGGCGGAGGCGACGTCACTAGCATGTAGAAAGACACAAGCGTCTAAAGGACCAGAACAACCTGTCAAGCCCATTGAAGATGTTGTCAAGGATGAAGAGTCGGATGGTGTTCAGCGAGGATAACCAACTAAAAATCCAAGTGTCCAAGTTGAATGCTCAGCCCAAATGGATCAACAGCATGTGAATAGTCCTAAATTCGCTGTTGCCGCAACAACCTTTGATCGAGTTGCTGGGAAGTTGGCCAAGGCAAAAGCCAAGCTTAGAAAGGAATTACGTGCACTTCGAAAGAAAGCTAAGGCGTACGCAACAAATGCCTCCAAAGAAGCCTCTCGCGAGGAGGTGCGAGTTGAAGAAGCGAGAGACACAAAAAAGTTGCAAGAACAAGAAATGATTGAAAAGGCTACAACCGACTTTTGTAAGGAGCTGCAGATTGAAGAGGATGATCATTGGCCGCGAGGTTGAGCACCCCAGTTAGTTCTAAGGGGAAGAAGAAAAAGAAGAAAAAGAGATTAGGGCACCATTTGCCCAGAGAAGATAAGGAACGCATCCTTCAAGATGCGGGAAAAGAAGAAGAGAAAAAGAGAGGAGGGTGGCAACAGCCAACCCGCTGCTCCTTTGCCTAAGAAACACAAGGGTAAGGAAAATGTGGTTGAAGTGCTACCTTAG

mRNA sequence

ATGGCCACTCTCACCCATACAAATCAAAGGACAATCCTTCGTGGACAAGAGTTCATAATATACTCGGGACCTCCTACTGCTCGTGGCACTGAGGAAGTGGGTGCTAACATCTTTGAAGGAGAGGAGGAGGTCAACTATGTGCATTATGAGACCCTACTGAGCCTTGCATTTCAGATGCAAGGAACAAGACGACATCCCCTATATGTGCTGAAGGAAGCGATGAGGCCACTCCTAAAAGAGAAGGCCACAGAGGAGACATTGGGGTCCATCGCTGAAAAAGAGTCTGATCACAGCGAGGAGGAAATGAGCAGGGAATGTGAACTGCAAGGGTCTTTCCGTACGACAACGGGCCTTAAAGACCAAACCCAGTGGACTCTAATGATTGGCCCATTGAGTAGTTTGTGGCCGCAGAAAAGAGCTTATGAATTTAACGATGAGGCGGAGGCGACGTCACTAGCATGTAGAAAGACACAAGCGTCTAAAGGACCAGAACAACCTGTCAAGCCCATTGAAGATGTTGTCAAGGATGAAGAGTCGGATGCCCAAATGGATCAACAGCATGTGAATAGTCCTAAATTCGCTGTTGCCGCAACAACCTTTGATCGAGTTGCTGGGAAGTTGGCCAAGGCAAAAGCCAAGCTTAGAAAGGAATTACGTGCACTTCGAAAGAAAGCTAAGGCGTACGCAACAAATGCCTCCAAAGAAGCCTCTCGCGAGGAGGTGCGAGTTGAAGAAGCGAGAGACACAAAAAAGTTGCAAGAACAAGAAATGATTGAAAAGGCTACAACCGACTTTTGTAAGGAGCTGCAGATTGAAGAGGATGATCATTGGCCGCGAGAGAAGATAAGGAACGCATCCTTCAAGATGCGGGAAAAGAAGAAGAGAAAAAGAGAGGAGGGTGGCAACAGCCAACCCGCTGCTCCTTTGCCTAAGAAACACAAGGGTAAGGAAAATGTGGTTGAAGTGCTACCTTAG

Coding sequence (CDS)

ATGGCCACTCTCACCCATACAAATCAAAGGACAATCCTTCGTGGACAAGAGTTCATAATATACTCGGGACCTCCTACTGCTCGTGGCACTGAGGAAGTGGGTGCTAACATCTTTGAAGGAGAGGAGGAGGTCAACTATGTGCATTATGAGACCCTACTGAGCCTTGCATTTCAGATGCAAGGAACAAGACGACATCCCCTATATGTGCTGAAGGAAGCGATGAGGCCACTCCTAAAAGAGAAGGCCACAGAGGAGACATTGGGGTCCATCGCTGAAAAAGAGTCTGATCACAGCGAGGAGGAAATGAGCAGGGAATGTGAACTGCAAGGGTCTTTCCGTACGACAACGGGCCTTAAAGACCAAACCCAGTGGACTCTAATGATTGGCCCATTGAGTAGTTTGTGGCCGCAGAAAAGAGCTTATGAATTTAACGATGAGGCGGAGGCGACGTCACTAGCATGTAGAAAGACACAAGCGTCTAAAGGACCAGAACAACCTGTCAAGCCCATTGAAGATGTTGTCAAGGATGAAGAGTCGGATGCCCAAATGGATCAACAGCATGTGAATAGTCCTAAATTCGCTGTTGCCGCAACAACCTTTGATCGAGTTGCTGGGAAGTTGGCCAAGGCAAAAGCCAAGCTTAGAAAGGAATTACGTGCACTTCGAAAGAAAGCTAAGGCGTACGCAACAAATGCCTCCAAAGAAGCCTCTCGCGAGGAGGTGCGAGTTGAAGAAGCGAGAGACACAAAAAAGTTGCAAGAACAAGAAATGATTGAAAAGGCTACAACCGACTTTTGTAAGGAGCTGCAGATTGAAGAGGATGATCATTGGCCGCGAGAGAAGATAAGGAACGCATCCTTCAAGATGCGGGAAAAGAAGAAGAGAAAAAGAGAGGAGGGTGGCAACAGCCAACCCGCTGCTCCTTTGCCTAAGAAACACAAGGGTAAGGAAAATGTGGTTGAAGTGCTACCTTAG

Protein sequence

MATLTHTNQRTILRGQEFIIYSGPPTARGTEEVGANIFEGEEEVNYVHYETLLSLAFQMQGTRRHPLYVLKEAMRPLLKEKATEETLGSIAEKESDHSEEEMSRECELQGSFRTTTGLKDQTQWTLMIGPLSSLWPQKRAYEFNDEAEATSLACRKTQASKGPEQPVKPIEDVVKDEESDAQMDQQHVNSPKFAVAATTFDRVAGKLAKAKAKLRKELRALRKKAKAYATNASKEASREEVRVEEARDTKKLQEQEMIEKATTDFCKELQIEEDDHWPREKIRNASFKMREKKKRKREEGGNSQPAAPLPKKHKGKENVVEVLP

Homology

The following BLAST results are available for this feature:

BLAST of ClCG10G007620 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G007620 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G007620 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G007620 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 204..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G007620.1	ClCG10G007620.1	mRNA