ClCG10G007440 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G007440
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	LINE-1 retrotransposable element ORF2 protein
Location	CG_Chr10: 10944382 .. 10949796 (-)
RNA-Seq Expression	ClCG10G007440
Synteny	ClCG10G007440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACAAGGAGTAGAATTAGAAAGCTGTAAGGTGAATGGACTACCGTTCTGCATTTGGTACGAAGCCGATCAGTTTTGGGTGGAAGACATGGAAACAAGTAAAATTCTCTCACTATCCTGGACACACCTTCGTTGGTTTACGAATAATATATCAGAACTAATCAGAGGGTCAAGTGATCGTTTTTTCATGAACAAGGGACGTGATGAGTCAGGAGGGACAAGACTTTCCAAATTCAAAGACCACAATGGATGGACCATGAGATGTGAAGTTTGGCCGGCAACAGGGGGGTCGTCACTTTATGCACGTCCCAATGGGAGATTCCAAACATGGATGGTACTCCTTTCTGAGCATGTTAAAAAGCTTTGGTAAGAAAAGAGAATCCCTTGGTCATCAGGAAAACCCAGATTCAGGGGCTAGAATGAATCTAGCTACCAAGAATTATACACCTTTGCAAGCTCTTAACGCAACCAGAGTAAGCTATGCTGACGTTGTCAAGATTAAGAATGCCTCGTCAAGCTATGATGTACTCGAAGGAAAACAGAGCACACCAAAGGACTCTGCTTTGCGTAATGGAAAATAGAGCACTAATGCATATCGGATTAAAAAAAATCAGGTCTTTCAAGAAGATTTCAACAATTTATGGGTGATAACGAGGTTATTTGTGTTAGACGATTGGAACGCAATAAGGAAACACTTAGAAGACTTATTCAACGTTAAATTCACTATTAATCCTCTGTTCTCAAACAAAGCATTGATCAAAAGTGAGGTAGGAAGAATGGAAGAATGGTCTGATGCTCCCGGCAAATGGCAGGACTTCGGACAGTTTCATTTACTAATTGAACAATGGAACACTTTTAAGCGTAGTTGGCCAGAATTCATTAGAGGTTTCGGTGGTTGGCTTACAATTAAAAATCTTCCACTAGAATACTGGAGGAAGAGTACTTTTGAAGCCATCGGAGCTCACTTCAGGGGGCTGGAAAGCATTGCAATTGATACGCTTAATTTGTTAAATTGTTCCGAAGCAAGAATTAGAGTTAAAAGGAACTTATGTGGATTAATGCCGGCAACAATTGAAATTATAGATGACAAGAGGGGAAATATCTTTCTAAACTTTGGTGACATTGAAAGTATAGAAGAATCAAATCTGAACAAGGGAGCTCTACTTTTATCAAACTTCTCAAACTCGATAGATTTACTCAGGCTCAATCAAGTTGCTCAGGATGAAGGTATAGAGGTTGAAGTTCCGGTTCAAAATTGGGCATTTCTAAAACAGAACAAGCTGAATCCCTCGAAAAACCCTTTTGCGGCCATGAAAAAGAATTCTGGCAAAGGCTTCAAAGTTTCGCCGGAGAAAAAGCAGTTAGTGCCGGAATTTTGCCGTCCACATGGATCCATCACCCCAAACCAGATCAATGTGAAACCAAGGGGAGTTTTTAGCCAACGAGTAATCAATGAGGGAACAAAGTGCAGAAGGCCAATCGGATTCCAAGGACCGATTCGACTTCCCACCAAGAAATTCAAATATTAATAATGAAGTAAAAGTAATATTGATTGAGGAAGGTAGAAAGACAGCCGCCATTGTCGACCAGTGCGAATTTAATAACGACTTGCTTCATATTCCACAGGCAAAGGAACTCCTCCCATCCAATGATGACAACTCAGCAGTCAGTCTCTCTCCCTCTAAAGATTCAAGAGTCGCGGAAGAAGGGGCTATTATTGGCCGAAAAGACAACCTATTTACTAATGATAAAGTGTTGAACTCCAAAGGAAAGAGGAAATTGCTTAGGCCTTATTCAAAACACTACATTCGGAAGAATACTACATTCATCAATTCATGGATGACCATTGCAAATTCTGATCTATTTGAAGAATGTTGTGTTAGATTACAATACCCAAGCACCTTCCATAACAGGTCAGAAAAATCTCAACTTAAAAGTTGCTCTTTCTCTCAATCGGAATTTGAAATCCCCAGCTCTAATGTGACTTTTATTCGAGGTACTCCTTGCCAAGAGTCTCAAACCGATCAACACAACATTCAAGATGAACATGGAGATTTAATAATCAGTGCAAGCAGTGAGGATTTGGAAATTTCAGATTCAGAGGAGGTTTTAGAAGGGGAAGATTTACTTTCAATCAATGGAGGTGAACTGAAGACTCTTTTTCAGTCAGAGGAGGGCCCAATTTTTGGTAAAGTGGAAGTTGCATCCTTCAAACAAATCGAACAGAAGAACATTCCCCAACACCTATTGTAATAATAGAAGATTGTGATATGACCTTCGGGTAATAACCCACTTTCTATTCGCCTCAATGAAGATCTTGTCGTGGAACACTAGAGGATTAGGAGATAAAACCAAAAGAATGGTAGTAAAGCAAAGTATAAAAAGACTAAATCCAAACTTAGTCTTAATCCAAGAAACAAAGAAGGATATTATTGATCTGGTTCTTGTAAAAGAACTATGGAGTTATAAAGATATTGGTTGGTCTTTTGTTGAGGCAATTGGTCGATCCGGTGGAATTTTAACAATGTGGGATGAAAGTAAGATCTCAGTCGCTCAAGTTTTAAAGGGTGGTTACTCACTAACGGTCAAATGCTTGACTATCAATAAAAAGAGTTTCTGGATAACAAATGTTTATAGGCCTAATGATTACAGAGAAAGGAAGCATCTTTGGGCAGAATTGCAATCTTTGGCGGCTTATTGCGTGGAGGCTTGGTGCATTGGAGGGGACTTCAACGTCATAAGGCGGATTCAAGAAAGGCTCCCTCAAGGAAGAGTCATAAGGGGAATGAGAAAGTTCAACAATTTTATAACCTCAGCACAATTAATGGAAATTCCACTTAGCAATGGTAAATTCACTTGGCCCCGAGAAGGCAATGTCACTTCCAGATCCCTCCTAGACAGATTCCTAATTTCAAGCAGTTGGGATGATTCTTTTGCTAACACAAGAGTCACAAGATAGATGTGCATCCTCTCTGATCACTTCCCCATTTTGTTAGAAGCTGGATCTTTTGAATGGGTTCCCCCTCCTTTTAGATTTTGCAACAGCTGGCTTGATCTAAAAGATTGTTGTTGTGTCATTGAGAATGCACTAGGAACGGATAATCAACATGGCTGGGCAGGATTTGTTTTATCTACTAAGCTCAGAAAGGTAAAGTCAGCAGTAAAGGCTTGGAACTTGAACTTTGAGAACGAAAAGAAGAAAACTGAAGAGGCCCTGATAAAAGAAATTGAAATTAGTGAATTGTTAATAGAAAACTCGGAGGACGATGGAGTTGGAAGAGATATTTGTTTATCATTGAAGGCTGATCTTTTGGCACTTTACTGCATCAAGGAAAGGAATCTAATGCAGAAAAGCAAGTTGAATTGGCTTAGCTTGGGGGATGAAAACTCAAAATTCTTCCACCGTTTTTTATCAGCTAAAAGAGAAGGAATCTGATTTTAGAATTGAAAAATGATCAAGGGGTAGTAACAACCTCTTACAAGGAAATTGAAGAGTTAATTTTGAGATTTTATAGCTCATTGTACATGAAAATTTGAAGAGATAGAGCTTTCCCACTCAACTTTCAATGTTTGGTGATTAATGACACTCAAAATAGGATGCTGGTTTCTCGATTCATAGTGGAGGAAGTGAGAAGTGCGCTGAAATTGTTGGGTAAAAACAAAGCACGGGGACCGGATGGCTTCACCGTAGAATTTTTCTTGAAATTTTGGGAGAAATTGAAGGATAACATCATGAAATTATTTGAAGAATTTTATGAAAATGGGAAATTAAATTCCTGTATAACGGAGAATTTCATTTGCTTGATTCAAAAAAAGGAGGATGCCGTTTTAGTGAAAGATTTCAGACCAATCAGCCTAACAACAATGCTGTATAAGCTCGTAGCCAAGGTGTTTGCGGAAAGATTAAGAAAGGTTATGTTGAATATAATTGCTCCTACTCCAAGTGCATTTATTGGGGAACGACAAATTCTCGACTCGGTTCTTATTGCTAATGAAGTGGTTGAAGATTACAAATCCAAAAAGAAAAAATGGTGGCTTTTAAAACTTGATCTTGAAAAAGCCTTTGATTGGGTAGATTGGACATTCCTTGAGAAAGCCCTAATTGGGAAGAAGTTTGATCCTAAATGGATATCGTGGATCATGGGTTGGTTTCTAACCCAAAGTTCTCAATCTTCATCAATGGAAGACCAAGGGGTAGAATTCAAGCCTCTAGAGGAATTAGACAAGGTGAACCACTCTCTCCCTTCCTCTTTCTACTAATTAGTGAAGTGCTTAATGGCTTGCTGTCAAGGTTGCATGAAAAGGGCAAATTTGAAGGATTTGTGGTGGGAAAAGATGCTATCCATGTAGTCTTAGTAGCCCTTGGATCAACATATCAAGAAGCTGGCAAAAAGTTGAAGCCTTGGCTGGTTACAAGGTGGGAAATGGAAGGAAAGTGGCCTTTTGGCTTGACCCTTGAATGGGCAAATCCCCGCTTAGTGTCTTATTCCTAAGACTTTTCAAAATCTCCTTGAATACAAAGGGTGCAATATCAGATTTTTGGGATTCCTCACACTCATCTTGGTTCATCAACTTCAGACGCTCTTAAAGAAGTAGGAGATGGTCGATTTTCAAAACCTCCTTGGTCTGCACCACAAACAAGGATAACGGTATTGGGAGTTAGAAGCACATGGAAACTATTTGGTAAAATCTCTTGTTAAGCATCTCTGTAAGGCCTCTCCCCCATTGGAAAGTTACTAAAGGACTCTCTTTGGAAATCCAAAAGTCCCAGGAGGGTCAATATTATCATTTGGATAATGCTTGAAGGACTTTTGAATTGTGCCTCAGTGTTACAATTAAAGCTCCCTTCTCATAGCCTCTCCCCACATGTTTGTCTTCTCTGTTTGGCGGATCATGAAGATTTACAACATCTATTCTTTAACTGTAATTTTGCAAAAAGTTGCTGGTTTCGCTTGTTTGAATGCTTCAATTTGAGTTGGGCTTTCGACATGGTGTTTAAAGAAAAGGTGCCTAAAATCTAAACCAAAACTGATTTGGTCTAATGCGGTTAAGGCTATACTTTTTGAAATATGATTTGAAAGAAATCAGAGGGCTTTCCATAAGAAAGCTTCCCCTTGGTTGGTGAAATTTGAGACAGCTCTGTTAAATGCTTCATCATGGTGCTCTCTATCCAAGAAGTTTGAAGACTTCTCCATTCAAGATATCAGCATCAATTGGAAGTTTTTTATTTTCCCCAATGAGTAGAGTCTTGTATTTAGGGGCAGATTGTACTTTTGTTAGTTTTGTCCGATTCAATCGCTCTTGTACTAGTTTTTGCTTTTTACGTTAGTCACCTTTTTTGTTCACATGTTAGGATATGATGAGAATGCTAAGGGGTGTCAACCTAGTTGAGATGTCTGGGTGCACTCGCTGA

mRNA sequence

ATGTCACAAGGAGTAGAATTAGAAAGCTGTAAGGTGAATGGACTACCGTTCTGCATTTGGTACGAAGCCGATCAGTTTTGGGTGGAAGACATGGAAACAAGTAAAATTCTCTCACTATCCTGGACACACCTTCGTTGGTTTACGAATAATATATCAGAACTAATCAGAGGGTCAAGTGATCGTTTTTTCATGAACAAGGGACGTGATGAGTCAGGAGGGACAAGACTTTCCAAATTCAAAGACCACAATGGATGGACCATGAGATGTGAAGTTTGGCCGGCAACAGGGGGGTCGTCACTTTATGCACGTCCCAATGGGAGATTCCAAACATGGATGGAAAACCCAGATTCAGGGGCTAGAATGAATCTAGCTACCAAGAATTATACACCTTTGCAAGCTCTTAACGCAACCAGAGTAAGCTATGCTGACGTTGTCAAGATTAAGAATGCCTCGTCAAGCTATGATGTACTCGAAGGAAAACAGAGCACACCAAAGGACTCTGCTTTGCACGATTGGAACGCAATAAGGAAACACTTAGAAGACTTATTCAACGTTAAATTCACTATTAATCCTCTGTTCTCAAACAAAGCATTGATCAAAAGTGAGGTAGGAAGAATGGAAGAATGGTCTGATGCTCCCGGCAAATGGCAGGACTTCGGACAGTTTCATTTACTAATTGAACAATGGAACACTTTTAAGCGTAGTTGGCCAGAATTCATTAGAGGTTTCGGTGGTTGGCTTACAATTAAAAATCTTCCACTAGAATACTGGAGGAAGAGTACTTTTGAAGCCATCGGAGCTCACTTCAGGGGGCTGGAAAGCATTGCAATTGATACGCTTAATTTGTTAAATTGTTCCGAAGCAAGAATTAGAGTTAAAAGGAACTTATGTGGATTAATGCCGGCAACAATTGAAATTATAGATGACAAGAGGGGAAATATCTTTCTAAACTTTGGTGACATTGAAAGTATAGAAGAATCAAATCTGAACAAGGGAGCTCTACTTTTATCAAACTTCTCAAACTCGATAGATTTACTCAGGCTCAATCAAGTTGCTCAGGATGAAGGTATAGAGGTTGAAGTTCCGGTTCAAAATTGGGCATTTCTAAAACAGAACAAGCTGAATCCCTCGAAAAACCCTTTTGCGGCCATGAAAAAGAATTCTGGCAAAGGCTTCAAAGTTTCGCCGGAGAAAAAGCAGTTAGTGCCGGAATTTTGCCGTCCACATGGATCCATCACCCCAAACCAGATCAATGTGAAACCAAGGGGAGTTTTTAGCCAACGAGACCGATTCGACTTCCCACCAAGAAATTCAAATATTAATAATGAAGTAAAAGTAATATTGATTGAGGAAGGTAGAAAGACAGCCGCCATTGTCGACCAGTGCGAATTTAATAACGACTTGCTTCATATTCCACAGGCAAAGGAACTCCTCCCATCCAATGATGACAACTCAGCAGTCAGTCTCTCTCCCTCTAAAGATTCAAGAGTCGCGGAAGAAGGGGCTATTATTGGCCGAAAAGACAACCTATTTACTAATGATAAAGTGTTGAACTCCAAAGGAAAGAGGAAATTGCTTAGGCCTTATTCAAAACACTACATTCGGAAGAATACTACATTCATCAATTCATGGATGACCATTGCAAATTCTGATCTATTTGAAGAATGTTGTGTTAGATTACAATACCCAAGCACCTTCCATAACAGGTCAGAAAAATCTCAACTTAAAAGTTGCTCTTTCTCTCAATCGGAATTTGAAATCCCCAGCTCTAATGTGACTTTTATTCGAGGTACTCCTTGCCAAGAGTCTCAAACCGATCAACACAACATTCAAGATGAACATGGAGATTTAATAATCAGTGCAAGCAGTGAGGATTTGGAAATTTCAGATTCAGAGGAGGTTTTAGAAGGGGAAGATTTACTTTCAATCAATGGAGGTGAACTGAAGACTCTTTTTCAGTCAGAGGAGGGCCCAATTTTTGGTAAAGTGGAAGTTGCATCCTTCAAACAAATCGAACAGAAGAACATTCCCCAACACCTATTAGGATTAGGAGATAAAACCAAAAGAATGGTAGTAAAGCAAAGTATAAAAAGACTAAATCCAAACTTAGTCTTAATCCAAGAAACAAAGAAGGATATTATTGATCTGGTTCTTGTAAAAGAACTATGGAGTTATAAAGATATTGGTTGGTCTTTTGTTGAGGCAATTGGTCGATCCGGTGGAATTTTAACAATGTGGGATGAAAGTAAGATCTCAGTCGCTCAAGTTTTAAAGGGTGGTTACTCACTAACGGTCAAATGCTTGACTATCAATAAAAAGAGTTTCTGGATAACAAATGTTTATAGGCCTAATGATTACAGAGAAAGGAAGCATCTTTGGGCAGAATTGCAATCTTTGGCGGCTTATTGCGTGGAGGCTTGGTGCATTGGAGGGGACTTCAACGTCATAAGGCGGATTCAAGAAAGGCTCCCTCAAGGAAGAGTCATAAGGGGAATGAGAAAGTTCAACAATTTTATAACCTCAGCACAATTAATGGAAATTCCACTTAGCAATGGTAAATTCACTTGGCCCCGAGAAGGCAATGTCACTTCCAGATCCCTCCTAGACAGATTCCTAATTTCAAGCAGTTGGGATGATTCTTTTGCTAACACAAGAAATGCACTAGGAACGGATAATCAACATGGCTGGGCAGGATTTGTTTTATCTACTAAGCTCAGAAAGGTAAAGTCAGCAGTAAAGGCTTGGAACTTGAACTTTGAGAACGAAAAGAAGAAAACTGAAGAGGCCCTGATAAAAGAAATTGAAATTAGTGAATTGTTAATAGAAAACTCGGAGGACGATGGAGTTGGAAGAGATATTTGTTTATCATTGAAGGCTGATCTTTTGGCACTTTACTGCATCAAGGAAAGGAATCTAATGCAGAAAAGCAAGTTGAATTGGCTTAGCTTGGGGGATGAAAACTCAAAATTCTTCCACCTGGAGGAAGTGAGAAGTGCGCTGAAATTGTTGGGTAAAAACAAAGCACGGGGACCGGATGGCTTCACCGTAGAATTTTTCTTGAAATTTTGGGAGAAATTGAAGGATAACATCATGAAATTATTTGAAGAATTTTATGAAAATGGGAAATTAAATTCCTGTATAACGGAGAATTTCATTTGCTTGATTCAAAAAAAGGAGGATGCCGTTTTAGTGAAAGATTTCAGACCAATCAGCCTAACAACAATGCTGTATAAGCTCGTAGCCAAGGTGTTTGCGGAAAGATTAAGAAAGGTTATGTTGAATATAATTGCTCCTACTCCAAGTGCATTTATTGGGGAACGACAAATTCTCGACTCGGTTCTTATTGCTAATGAAGTGGTTGAAGATTACAAATCCAAAAAGAAAAAATGGTGGCTTTTAAAACTTGATCTTGAAAAAGCCTTTGATTGGGTAGATTGGACATTCCTTGAGAAAGCCCTAATTGGGAAGAAGTTTGATCCTAAATGGATATCGTGGATCATGGGTTGGTTTCTAACCCAAAGTTCTCAATCTTCATCAATGGAAGACCAAGGGGTAGAATTCAAGCCTCTAGAGGAATTAGACAAGGGCAAATTTGAAGGATTTGTGGTGGGAAAAGATGCTATCCATGTAGTCTTAGTAGCCCTTGGATCAACATATCAAGAAGCTGGCAAAAAGTTGAAGCCTTGGCTGGTTACAAGGTGGGAAATGGAAGGAAAGTGGCCTTTTGGCTTGACCCTTGAATGGGCAAATCCCCGCTTAATTTTTGGGATTCCTCACACTCATCTTGGTTCATCAACTTCAGACGCTCTTAAAGAAGTAGGAGATGGTCGATTTTCAAAACCTCCTTGGTCTGCACCACAAACAAGGATAACGGATATGATGAGAATGCTAAGGGGTGTCAACCTAGTTGAGATGTCTGGGTGCACTCGCTGA

Coding sequence (CDS)

ATGTCACAAGGAGTAGAATTAGAAAGCTGTAAGGTGAATGGACTACCGTTCTGCATTTGGTACGAAGCCGATCAGTTTTGGGTGGAAGACATGGAAACAAGTAAAATTCTCTCACTATCCTGGACACACCTTCGTTGGTTTACGAATAATATATCAGAACTAATCAGAGGGTCAAGTGATCGTTTTTTCATGAACAAGGGACGTGATGAGTCAGGAGGGACAAGACTTTCCAAATTCAAAGACCACAATGGATGGACCATGAGATGTGAAGTTTGGCCGGCAACAGGGGGGTCGTCACTTTATGCACGTCCCAATGGGAGATTCCAAACATGGATGGAAAACCCAGATTCAGGGGCTAGAATGAATCTAGCTACCAAGAATTATACACCTTTGCAAGCTCTTAACGCAACCAGAGTAAGCTATGCTGACGTTGTCAAGATTAAGAATGCCTCGTCAAGCTATGATGTACTCGAAGGAAAACAGAGCACACCAAAGGACTCTGCTTTGCACGATTGGAACGCAATAAGGAAACACTTAGAAGACTTATTCAACGTTAAATTCACTATTAATCCTCTGTTCTCAAACAAAGCATTGATCAAAAGTGAGGTAGGAAGAATGGAAGAATGGTCTGATGCTCCCGGCAAATGGCAGGACTTCGGACAGTTTCATTTACTAATTGAACAATGGAACACTTTTAAGCGTAGTTGGCCAGAATTCATTAGAGGTTTCGGTGGTTGGCTTACAATTAAAAATCTTCCACTAGAATACTGGAGGAAGAGTACTTTTGAAGCCATCGGAGCTCACTTCAGGGGGCTGGAAAGCATTGCAATTGATACGCTTAATTTGTTAAATTGTTCCGAAGCAAGAATTAGAGTTAAAAGGAACTTATGTGGATTAATGCCGGCAACAATTGAAATTATAGATGACAAGAGGGGAAATATCTTTCTAAACTTTGGTGACATTGAAAGTATAGAAGAATCAAATCTGAACAAGGGAGCTCTACTTTTATCAAACTTCTCAAACTCGATAGATTTACTCAGGCTCAATCAAGTTGCTCAGGATGAAGGTATAGAGGTTGAAGTTCCGGTTCAAAATTGGGCATTTCTAAAACAGAACAAGCTGAATCCCTCGAAAAACCCTTTTGCGGCCATGAAAAAGAATTCTGGCAAAGGCTTCAAAGTTTCGCCGGAGAAAAAGCAGTTAGTGCCGGAATTTTGCCGTCCACATGGATCCATCACCCCAAACCAGATCAATGTGAAACCAAGGGGAGTTTTTAGCCAACGAGACCGATTCGACTTCCCACCAAGAAATTCAAATATTAATAATGAAGTAAAAGTAATATTGATTGAGGAAGGTAGAAAGACAGCCGCCATTGTCGACCAGTGCGAATTTAATAACGACTTGCTTCATATTCCACAGGCAAAGGAACTCCTCCCATCCAATGATGACAACTCAGCAGTCAGTCTCTCTCCCTCTAAAGATTCAAGAGTCGCGGAAGAAGGGGCTATTATTGGCCGAAAAGACAACCTATTTACTAATGATAAAGTGTTGAACTCCAAAGGAAAGAGGAAATTGCTTAGGCCTTATTCAAAACACTACATTCGGAAGAATACTACATTCATCAATTCATGGATGACCATTGCAAATTCTGATCTATTTGAAGAATGTTGTGTTAGATTACAATACCCAAGCACCTTCCATAACAGGTCAGAAAAATCTCAACTTAAAAGTTGCTCTTTCTCTCAATCGGAATTTGAAATCCCCAGCTCTAATGTGACTTTTATTCGAGGTACTCCTTGCCAAGAGTCTCAAACCGATCAACACAACATTCAAGATGAACATGGAGATTTAATAATCAGTGCAAGCAGTGAGGATTTGGAAATTTCAGATTCAGAGGAGGTTTTAGAAGGGGAAGATTTACTTTCAATCAATGGAGGTGAACTGAAGACTCTTTTTCAGTCAGAGGAGGGCCCAATTTTTGGTAAAGTGGAAGTTGCATCCTTCAAACAAATCGAACAGAAGAACATTCCCCAACACCTATTAGGATTAGGAGATAAAACCAAAAGAATGGTAGTAAAGCAAAGTATAAAAAGACTAAATCCAAACTTAGTCTTAATCCAAGAAACAAAGAAGGATATTATTGATCTGGTTCTTGTAAAAGAACTATGGAGTTATAAAGATATTGGTTGGTCTTTTGTTGAGGCAATTGGTCGATCCGGTGGAATTTTAACAATGTGGGATGAAAGTAAGATCTCAGTCGCTCAAGTTTTAAAGGGTGGTTACTCACTAACGGTCAAATGCTTGACTATCAATAAAAAGAGTTTCTGGATAACAAATGTTTATAGGCCTAATGATTACAGAGAAAGGAAGCATCTTTGGGCAGAATTGCAATCTTTGGCGGCTTATTGCGTGGAGGCTTGGTGCATTGGAGGGGACTTCAACGTCATAAGGCGGATTCAAGAAAGGCTCCCTCAAGGAAGAGTCATAAGGGGAATGAGAAAGTTCAACAATTTTATAACCTCAGCACAATTAATGGAAATTCCACTTAGCAATGGTAAATTCACTTGGCCCCGAGAAGGCAATGTCACTTCCAGATCCCTCCTAGACAGATTCCTAATTTCAAGCAGTTGGGATGATTCTTTTGCTAACACAAGAAATGCACTAGGAACGGATAATCAACATGGCTGGGCAGGATTTGTTTTATCTACTAAGCTCAGAAAGGTAAAGTCAGCAGTAAAGGCTTGGAACTTGAACTTTGAGAACGAAAAGAAGAAAACTGAAGAGGCCCTGATAAAAGAAATTGAAATTAGTGAATTGTTAATAGAAAACTCGGAGGACGATGGAGTTGGAAGAGATATTTGTTTATCATTGAAGGCTGATCTTTTGGCACTTTACTGCATCAAGGAAAGGAATCTAATGCAGAAAAGCAAGTTGAATTGGCTTAGCTTGGGGGATGAAAACTCAAAATTCTTCCACCTGGAGGAAGTGAGAAGTGCGCTGAAATTGTTGGGTAAAAACAAAGCACGGGGACCGGATGGCTTCACCGTAGAATTTTTCTTGAAATTTTGGGAGAAATTGAAGGATAACATCATGAAATTATTTGAAGAATTTTATGAAAATGGGAAATTAAATTCCTGTATAACGGAGAATTTCATTTGCTTGATTCAAAAAAAGGAGGATGCCGTTTTAGTGAAAGATTTCAGACCAATCAGCCTAACAACAATGCTGTATAAGCTCGTAGCCAAGGTGTTTGCGGAAAGATTAAGAAAGGTTATGTTGAATATAATTGCTCCTACTCCAAGTGCATTTATTGGGGAACGACAAATTCTCGACTCGGTTCTTATTGCTAATGAAGTGGTTGAAGATTACAAATCCAAAAAGAAAAAATGGTGGCTTTTAAAACTTGATCTTGAAAAAGCCTTTGATTGGGTAGATTGGACATTCCTTGAGAAAGCCCTAATTGGGAAGAAGTTTGATCCTAAATGGATATCGTGGATCATGGGTTGGTTTCTAACCCAAAGTTCTCAATCTTCATCAATGGAAGACCAAGGGGTAGAATTCAAGCCTCTAGAGGAATTAGACAAGGGCAAATTTGAAGGATTTGTGGTGGGAAAAGATGCTATCCATGTAGTCTTAGTAGCCCTTGGATCAACATATCAAGAAGCTGGCAAAAAGTTGAAGCCTTGGCTGGTTACAAGGTGGGAAATGGAAGGAAAGTGGCCTTTTGGCTTGACCCTTGAATGGGCAAATCCCCGCTTAATTTTTGGGATTCCTCACACTCATCTTGGTTCATCAACTTCAGACGCTCTTAAAGAAGTAGGAGATGGTCGATTTTCAAAACCTCCTTGGTCTGCACCACAAACAAGGATAACGGATATGATGAGAATGCTAAGGGGTGTCAACCTAGTTGAGATGTCTGGGTGCACTCGCTGA

Protein sequence

MSQGVELESCKVNGLPFCIWYEADQFWVEDMETSKILSLSWTHLRWFTNNISELIRGSSDRFFMNKGRDESGGTRLSKFKDHNGWTMRCEVWPATGGSSLYARPNGRFQTWMENPDSGARMNLATKNYTPLQALNATRVSYADVVKIKNASSSYDVLEGKQSTPKDSALHDWNAIRKHLEDLFNVKFTINPLFSNKALIKSEVGRMEEWSDAPGKWQDFGQFHLLIEQWNTFKRSWPEFIRGFGGWLTIKNLPLEYWRKSTFEAIGAHFRGLESIAIDTLNLLNCSEARIRVKRNLCGLMPATIEIIDDKRGNIFLNFGDIESIEESNLNKGALLLSNFSNSIDLLRLNQVAQDEGIEVEVPVQNWAFLKQNKLNPSKNPFAAMKKNSGKGFKVSPEKKQLVPEFCRPHGSITPNQINVKPRGVFSQRDRFDFPPRNSNINNEVKVILIEEGRKTAAIVDQCEFNNDLLHIPQAKELLPSNDDNSAVSLSPSKDSRVAEEGAIIGRKDNLFTNDKVLNSKGKRKLLRPYSKHYIRKNTTFINSWMTIANSDLFEECCVRLQYPSTFHNRSEKSQLKSCSFSQSEFEIPSSNVTFIRGTPCQESQTDQHNIQDEHGDLIISASSEDLEISDSEEVLEGEDLLSINGGELKTLFQSEEGPIFGKVEVASFKQIEQKNIPQHLLGLGDKTKRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFVEAIGRSGGILTMWDESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLWAELQSLAAYCVEAWCIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGKFTWPREGNVTSRSLLDRFLISSSWDDSFANTRNALGTDNQHGWAGFVLSTKLRKVKSAVKAWNLNFENEKKKTEEALIKEIEISELLIENSEDDGVGRDICLSLKADLLALYCIKERNLMQKSKLNWLSLGDENSKFFHLEEVRSALKLLGKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCITENFICLIQKKEDAVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVVEDYKSKKKKWWLLKLDLEKAFDWVDWTFLEKALIGKKFDPKWISWIMGWFLTQSSQSSSMEDQGVEFKPLEELDKGKFEGFVVGKDAIHVVLVALGSTYQEAGKKLKPWLVTRWEMEGKWPFGLTLEWANPRLIFGIPHTHLGSSTSDALKEVGDGRFSKPPWSAPQTRITDMMRMLRGVNLVEMSGCTR

Homology

[Close]

BLAST of ClCG10G007440 vs. NCBI nr
Match: VVA20479.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 344.7 bits (883), Expect = 3.4e-90
Identity = 202/588 (34.35%), Postives = 307/588 (52.21%), Query Frame = 0


Query: 674  KNIPQHLLGLGDKTKRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFV 733
            K I  ++ GLG + KR++VK+ ++RL P++V++ ETKK+I+D  LV  +W  +   W F 
Sbjct: 9    KIISWNIRGLGSRRKRLLVKEQLRRLKPDIVILLETKKEIVDRQLVTGVWGSRFKEWVFS 68

Query: 734  EAIGRSGGILTMWDESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLW 793
             ++GRSGGI  +W+   +SV   + G +S++++ +      +W++ +Y P   RER   W
Sbjct: 69   PSLGRSGGIAVLWNSQSVSVIDSMVGDFSVSIRIVENIGTDWWLSGIYGPCRQRERISFW 128

Query: 794  AELQSLAAYCVEAWCIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGK 853
             EL  L  YC + WC+GGDFNV+R   E+  +GRV + MR FN+FI    L +  L N  
Sbjct: 129  EELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNAS 188

Query: 854  FTWP--REGNVTSRSLLDRFLISSSWDDSFANTRNAL----------------------- 913
            FTW   RE  V  R  LDRFL+S SW+D F + R+                         
Sbjct: 189  FTWSNLRENAVCRR--LDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPS 248

Query: 914  ----------------------GTDNQHGWAGFVLSTKLRKVKSAVKAWNLNFENEKKKT 973
                                    D   GW G+   ++L+ +KS +K W+     E+   
Sbjct: 249  PFRFENMWLKHPDFKRKIKLWWDEDQTPGWEGYKFMSRLKMLKSKLKVWS----KEEFGD 308

Query: 974  EEALIKEIEISELLIENSEDDGVGRDICLSLKADLLALYC-----IKERNLMQKSKLNWL 1033
             E  ++E E + LL+ +  +   G D  L  + D L L        +E    Q+ K+ W 
Sbjct: 309  VERDLREAE-ARLLVLDQREGTEGLDHLLRSERDNLILKIGDLAQKEEVKWRQRGKVKWA 368

Query: 1034 SLGDENSKFFH----------------LEEV----------RSALKLL------------ 1093
              GD N+KFFH                +E++          R  ++              
Sbjct: 369  REGDGNTKFFHRVANGARKINYIDKLEVEDLGVIEVDANIERKVIRFFKGLYSSNKNKAV 428

Query: 1094 ---GKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCITENFICLIQKKED 1153
               GK+K+ GPDGF++ FF   WE +K ++MK+ ++F+++G +N    E FICLI KK +
Sbjct: 429  FDCGKDKSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKAN 488

Query: 1154 AVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVV 1169
            +V V DFRPISL T LYK+++KV A RLR+V+ N I+ +  AF+ +RQILD+VL+ANEVV
Sbjct: 489  SVKVTDFRPISLVTSLYKVISKVLASRLREVLGNTISQSQGAFVQKRQILDAVLVANEVV 548

[Close]

BLAST of ClCG10G007440 vs. NCBI nr
Match: RVX11537.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 338.6 bits (867), Expect = 2.4e-88
Identity = 200/566 (35.34%), Postives = 292/566 (51.59%), Query Frame = 0


Query: 682  GLGDKTKRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFVEAIGRSGG 741
            GLG K KR +V++ +   NP++V++QETK++  D   V  +W  K + W+ + A G  GG
Sbjct: 750  GLGSKKKRRIVRRFLSTQNPDIVMLQETKRETWDRRFVSSVWKGKRVEWAALPACGALGG 809

Query: 742  ILTMWDESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLWAELQSLAA 801
            I+ +WD SK    + + G +S+TVK  +  + S W+T+VY P +   RK  W ELQ L  
Sbjct: 810  IVILWDSSKFECTEKVLGSFSVTVKFNSGEEGSCWLTSVYGPINPLWRKDFWLELQDLYG 869

Query: 802  YCVEAWCIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGKFTWPREGN 861
                 WC+GGDFNVIRRI E+L + R+   MR F+ FI  + L++ PL N  FTW     
Sbjct: 870  LTFPRWCVGGDFNVIRRISEKLGETRLTFNMRCFDEFIRESGLLDPPLRNAAFTWSNMQA 929

Query: 862  VTSRSLLDRFLISSSWDDSFANT-----------RNALGTDNQ----------------- 921
                  LDRFL SS WD  F+ +            N +  +                   
Sbjct: 930  DPICKRLDRFLFSSEWDTFFSQSFQEALPRWTSDHNPICLETNPLKWGPTPFRFENMWLL 989

Query: 922  -----------------HGWAGFVLSTKLRKVKSAVKAWNLNFENEKKKTEEALIKEIEI 981
                              GW G     KL+ VKS +K WN+    + K+ ++ ++ ++  
Sbjct: 990  HPEFKEKFRVWWLECTGEGWEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKKLILTDLSR 1049

Query: 982  SELLIENSEDDGVGRDICL--SLKADLLALYCIKER-NLMQKSKLNWLSLGDENSKFFHL 1041
             +L+    ++  +  D+ L  +LK   L    +KE     QKSK+ W+  GD NSKFFH 
Sbjct: 1050 IDLI---EQEGNLNSDLVLERTLKRRELEDVLLKEEVQWRQKSKVKWIKEGDCNSKFFHR 1109

Query: 1042 -------------------------------EEVRSALKLLGKNKARGPDGFTVEFFLKF 1101
                                           EEVR A+  L K KA GPDGFT+  + + 
Sbjct: 1110 VATGESWRVEGIDWVPISDESGVWLDRPFTEEEVRRAVFQLNKEKAPGPDGFTIAVYQEC 1169

Query: 1102 WEKLKDNIMKLFEEFYENGKLNSCITENFICLIQKKEDAVLVKDFRPISLTTMLYKLVAK 1161
            W+ +K+++M++F EF+ NG +N      FI L+ KK  +V + D+RPISL T LYK++AK
Sbjct: 1170 WDVIKEDLMRVFLEFHTNGVINQSTNATFIALVPKKSQSVKISDYRPISLVTSLYKIIAK 1229

Query: 1162 VFAERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVVEDYKSKKKKWWLLKLDLEKAFD 1169
            V + RLRKV+   I+ +  AF+  R ILD+VLIANEVV++ +   ++  + K+D EKA+D
Sbjct: 1230 VLSGRLRKVLHETISDSQGAFVEGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYD 1289

[Close]

BLAST of ClCG10G007440 vs. NCBI nr
Match: RVW25035.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 335.5 bits (859), Expect = 2.1e-87
Identity = 200/572 (34.97%), Postives = 296/572 (51.75%), Query Frame = 0


Query: 682  GLGDKTKRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFVEAIGRSGG 741
            GLG K KR +V++ +   NP++V++QETK++  D   V  +W+ K + W  + A G SGG
Sbjct: 1665 GLGSKKKRRIVRRFLSTQNPDIVMLQETKRETWDRRFVSSVWTGKRVEWVALPACGASGG 1724

Query: 742  ILTMWDESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLWAELQSLAA 801
            I+ +WD SK    + + G +S+TVK  +  + SFW+T+VY P +   RK  W ELQ L  
Sbjct: 1725 IVILWDSSKFECTEKVLGSFSVTVKFNSGEEGSFWLTSVYGPINPLWRKDFWLELQDLYG 1784

Query: 802  YCVEAWCIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGKFTWPREGN 861
                 WC+GGDFNVIRRI E+L + R+   MR F+ FI  + L++ PL N  FTW     
Sbjct: 1785 LTFPRWCVGGDFNVIRRISEKLGESRLTFNMRCFDEFIRESGLLDPPLRNAAFTWSNMQA 1844

Query: 862  VTSRSLLDRFLISSSWDDSFANT-RNAL---GTDNQ------------------------ 921
                  LDRFL SS WD  F+ + + AL    +D+                         
Sbjct: 1845 DPICKRLDRFLFSSEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFENMWLL 1904

Query: 922  -----------------HGWAGFVLSTKLRKVKSAVKAWNLNFENEKKKTEEALIKEIEI 981
                              GW G     KL+ VK  +K WN+    + K+ ++ ++ ++  
Sbjct: 1905 HPEFKEKFRVWWQECTGEGWEGHKFMRKLKFVKLKLKKWNIMTFGDLKERKKLILTDLSR 1964

Query: 982  SELLIENSEDDGVGRDICL--SLKADLLALYCIKER-NLMQKSKLNWLSLGDENSKFFHL 1041
             +L+    ++  +  D+ L  +L+   L    +KE     QKS++ W+  GD NSKFFH 
Sbjct: 1965 IDLI---EQEGNLNPDLVLERTLRRKELEDVLLKEEVQWRQKSRVKWIKEGDCNSKFFHR 2024

Query: 1042 -------------------------------EEVRSALKLLGKNKARGPDGFTVEFFLKF 1101
                                           EEVR  +  L K KA GPDGFT+  + + 
Sbjct: 2025 VATGESWRVEGIDWVPISGESGVWLDRPFTEEEVRMTVFQLNKEKAPGPDGFTIAVYQEC 2084

Query: 1102 WEKLKDNIMKLFEEFYENGKLNSCITENFICLIQKKEDAVLVKDFRPISLTTMLYKLVAK 1161
            W+ +K+++M++F EF+ NG +N      FI L+ KK  +  + D+RPISL T LYK++AK
Sbjct: 2085 WDVIKEDLMRVFLEFHTNGVINQSTNATFIALVPKKSQSFKISDYRPISLVTSLYKIIAK 2144

Query: 1162 VFAERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVVEDYKSKKKKWWLLKLDLEKAFD 1175
            V + RLRKV+   I+ +  AF+  R ILD+VLIANEVV++ +   ++  + K+D EKA+D
Sbjct: 2145 VLSGRLRKVLHETISGSQGAFVEGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYD 2204

[Close]

BLAST of ClCG10G007440 vs. NCBI nr
Match: BBH07150.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 331.6 bits (849), Expect = 3.0e-86
Identity = 187/541 (34.57%), Postives = 290/541 (53.60%), Query Frame = 0


Query: 688  KRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFVEAIGRSGGILTMWD 747
            +++ VK+ ++RL P++V++ ETKK+I+D  LV  +W  +   W F  ++GRSGGI  +W+
Sbjct: 4    EKITVKEQLRRLKPDIVILLETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWN 63

Query: 748  ESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLWAELQSLAAYCVEAW 807
               +SV   + G +S++++ +      +W++ +Y P   RER   W EL  L  YC + W
Sbjct: 64   SQSVSVIDSMVGEFSVSIRIVENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKW 123

Query: 808  CIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGKFTWP--REGNVTSR 867
            C+GGDFNV+R   E+  +GRV + MR FN+FI    L +  L N  FTW   RE  V  R
Sbjct: 124  CLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRR 183

Query: 868  SLLDRFLISSSWDDSFANTRNAL------------------------------------- 927
              LDRFL+S SW+D F + R+                                       
Sbjct: 184  --LDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPSPFRFENMWLKHPDF 243

Query: 928  --------GTDNQHGWAGFVLSTKLRKVKSAVKAWNL----NFENEKKKTEEALI----- 987
                      D   GW G+   ++L+ +KS +K W+     + E + ++ E  L+     
Sbjct: 244  KRKIKLWWDEDQTPGWEGYKFMSRLKMLKSKLKVWSKEEFGDVERDLREAEARLLIGDLA 303

Query: 988  KEIEISELLIENSEDDGVGRDICLSLKADLLALYCIKERNLMQKSKLNWLSLGDENSKF- 1047
            ++ + +    E++E+ G G D                         LNW  +    + + 
Sbjct: 304  QKRKSNGAKEESNENAGWGVD------------------------GLNWCPISQTEADWL 363

Query: 1048 ---FHLEEVRSALKLLGKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCI 1107
               F LEEV+ A+   GK+K+ GPDGF++ FF   WE +K ++MK+ ++F+++G +N   
Sbjct: 364  ERPFELEEVQKAVFDCGKDKSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVT 423

Query: 1108 TENFICLIQKKEDAVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGER 1167
             E FICLI KK ++V V DFRPISL T LYK+++KV A RLR+V+ N I+ +  AF+ +R
Sbjct: 424  NETFICLIPKKANSVKVTDFRPISLVTSLYKVISKVLASRLREVLGNTISQSQGAFVQKR 483

Query: 1168 QILDSVLIANEVVEDYKSKKKKWWLLKLDLEKAFDWVDWTFLEKALIGKKFDPKWISWIM 1169
            QILD+VL+ANEVVE+ + + +K  + K+D EKA+D V+W F++  L  K F  KW  WI 
Sbjct: 484  QILDAVLVANEVVEEVRKQNRKGLVFKIDFEKAYDHVEWNFVDDVLARKGFGVKWRGWIF 518

[Close]

BLAST of ClCG10G007440 vs. NCBI nr
Match: RVW64408.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 325.5 bits (833), Expect = 2.1e-84
Identity = 203/613 (33.12%), Postives = 299/613 (48.78%), Query Frame = 0


Query: 682  GLGDKTKRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFVEAIGRSGG 741
            GLG K KR +V++ +   NP++V++QETK++  D   V  +W  K + W+ + A G SGG
Sbjct: 745  GLGSKKKRRIVRRFLSTQNPDIVMLQETKRETWDRRFVSSVWKGKRVEWAALPACGASGG 804

Query: 742  ILTMWDESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLWAELQSLAA 801
            I+ +WD SK+   + + G +S+TVK  +  + SFW+T+VY P +   RK  W ELQ L  
Sbjct: 805  IVILWDSSKLECTEKVLGSFSVTVKFNSGEEGSFWLTSVYGPINPLWRKDFWLELQDLYG 864

Query: 802  YCVEAWCIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGKFTWPREGN 861
                 WC+GGDFNVIRRI E+L + R+   MR F+ FI  + L++ PL N  FTW     
Sbjct: 865  LTFPRWCVGGDFNVIRRISEKLGETRLTLNMRCFDEFIRESGLIDPPLRNAAFTWSNMQA 924

Query: 862  VTSRSLLDRFLISSSWDDSFANT-RNAL---GTDNQ------------------------ 921
                  LDRFL SS WD  F+ + + AL    +D+                         
Sbjct: 925  DPICKRLDRFLFSSEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFENMWLL 984

Query: 922  -----------------HGWAGFVLSTKLRKVKSAVKAWNLNFENEKKKTEEALIKEIEI 981
                              GW G     KL+ VKS +K WN+    + K+ ++ ++ ++  
Sbjct: 985  HPEFKEKFRVWWLECTGEGWEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKKLILTDLSR 1044

Query: 982  SELLIENSEDDGVGRDICL--SLKADLLALYCIKER-NLMQKSKLNWLSLGDENSKFFHL 1041
             +L+    ++  +  D+ L  +LK   L    +KE     QKS++ W+  GD NSKFFH 
Sbjct: 1045 IDLI---EQEGNLNSDLVLERTLKRRELEDVLLKEEVQWRQKSRVKWIKEGDCNSKFFHR 1104

Query: 1042 ------------------------------------------------------------ 1101
                                                                        
Sbjct: 1105 VATGRRSRKFIKSLISERGETLNNIEDISEEIVNFFGNLYSKPVGESWRVEGIDWVPISG 1164

Query: 1102 ------------EEVRSALKLLGKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENG 1161
                        EEVR A+  L K KA GPDGFT+  + + W+ +K+++M++F EF+ NG
Sbjct: 1165 ESGGWLDRPFTEEEVRRAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNG 1224

Query: 1162 KLNSCITENFICLIQKKEDAVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPS 1175
             +N      FI L+ KK  +V + D+RPISL T LYK++AKV + RLRKV+   I+ +  
Sbjct: 1225 VINQSTNATFIALVPKKSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQG 1284

[Close]

BLAST of ClCG10G007440 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-21
Identity = 59/174 (33.91%), Postives = 97/174 (55.75%), Query Frame = 0


Query: 993  LEEVRSALKLLGKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCITENFI 1052
            L+E+  AL+L+  NK+ G DG T+EFF  FW+ L  +  ++  E ++ G+L        +
Sbjct: 451  LDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVL 510

Query: 1053 CLIQKKEDAVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGERQILDS 1112
             L+ KK D  L+K++RP+SL +  YK+VAK  + RL+ V+  +I P  S  +  R I D+
Sbjct: 511  SLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDN 570

Query: 1113 VLIANEVVEDYKSKKKKWWLLKLDLEKAFDWVDWTFLEKALIGKKFDPKWISWI 1167
            V +  +++   +        L LD EKAFD VD  +L   L    F P+++ ++
Sbjct: 571  VFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYL 624

[Close]

BLAST of ClCG10G007440 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-12
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 994  EEVRSALKLLGKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCITENFIC 1053
            +E+ + +  L   K+ GPDGF+ EF+  F E L   + KLF +    G L +   E  I 
Sbjct: 463  KEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATIT 522

Query: 1054 LIQK-KEDAVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGERQILDS 1113
            LI K ++D   +++FRPISL  +  K++ K+ A R+++ +  II P    FI   Q   +
Sbjct: 523  LIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFN 582

Query: 1114 VLIANEVVEDY-KSKKKKWWLLKLDLEKAFDWVDWTFLEKAL 1154
            +  +  V+    K K K   ++ LD EKAFD +   F+ K L
Sbjct: 583  IRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVL 624

[Close]

BLAST of ClCG10G007440 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-11
Identity = 50/161 (31.06%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 995  EVRSALKLLGKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCITENFICL 1054
            E+ + +  L   K+ GPDGFT EF+ ++ E+L   ++KLF+   + G L +   E  I L
Sbjct: 457  EIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIIL 516

Query: 1055 IQKK-EDAVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGERQILDSV 1114
            I K   D    ++FRPISL  +  K++ K+ A R+++ +  +I      FI   Q   ++
Sbjct: 517  IPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNI 576

Query: 1115 LIANEVVEDY-KSKKKKWWLLKLDLEKAFDWVDWTFLEKAL 1154
              +  V++   ++K K   ++ +D EKAFD +   F+ K L
Sbjct: 577  RKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTL 617

[Close]

BLAST of ClCG10G007440 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-11
Identity = 52/161 (32.30%), Postives = 85/161 (52.80%), Query Frame = 0


Query: 995  EVRSALKLLGKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCITENFICL 1054
            E+ S ++ L K K+ GPDGFT EF+  F E+L   ++ LF+   + G L +   E  I L
Sbjct: 456  EIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITL 515

Query: 1055 IQKK-EDAVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGERQILDSV 1114
            I K  +D    +++RPISL  +  K++ K+   R+++ +  II      FI   Q   ++
Sbjct: 516  IPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNI 575

Query: 1115 LIANEVVEDY-KSKKKKWWLLKLDLEKAFDWVDWTFLEKAL 1154
              +  V++   K K K   +L +D EKAFD +   F+ + L
Sbjct: 576  RKSINVIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTL 616

[Close]

BLAST of ClCG10G007440 vs. ExPASy Swiss-Prot
Match: Q03278 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-05
Identity = 42/192 (21.88%), Postives = 89/192 (46.35%), Query Frame = 0


Query: 1005 KNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCITENFICLIQKKEDAVLV 1064
            K  A GPDG T       W  + + I  LF     +G+      ++   LI K+   +  
Sbjct: 331  KRTAAGPDGMTT----TAWNSIDECIKSLFNMIMYHGQCPRRYLDSRTVLIPKEPGTMDP 390

Query: 1065 KDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVVEDYK 1124
              FRP+S+ ++  +   ++ A R+ +    ++     AFI    + ++  + + ++++ +
Sbjct: 391  ACFRPLSIASVALRHFHRILANRIGE--HGLLDTRQRAFIVADGVAENTSLLSAMIKEAR 450

Query: 1125 SKKKKWWLLKLDLEKAFDWVDWTFLEKALIGKKFDPKWISWIMGWFLTQSSQSSSMEDQG 1184
             K K  ++  LD++KAFD V+   +  AL  KK   +  ++IM  +    ++   ++ +G
Sbjct: 451  MKIKGLYIAILDVKKAFDSVEHRSILDALRRKKLPLEMRNYIMWVYRNSKTRLEVVKTKG 510

Query: 1185 VEFKPLEELDKG 1197
               +P   + +G
Sbjct: 511  RWIRPARGVRQG 516

[Close]

BLAST of ClCG10G007440 vs. ExPASy TrEMBL
Match: A0A5E4F090 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035017 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.6e-90
Identity = 202/588 (34.35%), Postives = 307/588 (52.21%), Query Frame = 0


Query: 674  KNIPQHLLGLGDKTKRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFV 733
            K I  ++ GLG + KR++VK+ ++RL P++V++ ETKK+I+D  LV  +W  +   W F 
Sbjct: 9    KIISWNIRGLGSRRKRLLVKEQLRRLKPDIVILLETKKEIVDRQLVTGVWGSRFKEWVFS 68

Query: 734  EAIGRSGGILTMWDESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLW 793
             ++GRSGGI  +W+   +SV   + G +S++++ +      +W++ +Y P   RER   W
Sbjct: 69   PSLGRSGGIAVLWNSQSVSVIDSMVGDFSVSIRIVENIGTDWWLSGIYGPCRQRERISFW 128

Query: 794  AELQSLAAYCVEAWCIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGK 853
             EL  L  YC + WC+GGDFNV+R   E+  +GRV + MR FN+FI    L +  L N  
Sbjct: 129  EELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNAS 188

Query: 854  FTWP--REGNVTSRSLLDRFLISSSWDDSFANTRNAL----------------------- 913
            FTW   RE  V  R  LDRFL+S SW+D F + R+                         
Sbjct: 189  FTWSNLRENAVCRR--LDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPS 248

Query: 914  ----------------------GTDNQHGWAGFVLSTKLRKVKSAVKAWNLNFENEKKKT 973
                                    D   GW G+   ++L+ +KS +K W+     E+   
Sbjct: 249  PFRFENMWLKHPDFKRKIKLWWDEDQTPGWEGYKFMSRLKMLKSKLKVWS----KEEFGD 308

Query: 974  EEALIKEIEISELLIENSEDDGVGRDICLSLKADLLALYC-----IKERNLMQKSKLNWL 1033
             E  ++E E + LL+ +  +   G D  L  + D L L        +E    Q+ K+ W 
Sbjct: 309  VERDLREAE-ARLLVLDQREGTEGLDHLLRSERDNLILKIGDLAQKEEVKWRQRGKVKWA 368

Query: 1034 SLGDENSKFFH----------------LEEV----------RSALKLL------------ 1093
              GD N+KFFH                +E++          R  ++              
Sbjct: 369  REGDGNTKFFHRVANGARKINYIDKLEVEDLGVIEVDANIERKVIRFFKGLYSSNKNKAV 428

Query: 1094 ---GKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCITENFICLIQKKED 1153
               GK+K+ GPDGF++ FF   WE +K ++MK+ ++F+++G +N    E FICLI KK +
Sbjct: 429  FDCGKDKSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKAN 488

Query: 1154 AVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVV 1169
            +V V DFRPISL T LYK+++KV A RLR+V+ N I+ +  AF+ +RQILD+VL+ANEVV
Sbjct: 489  SVKVTDFRPISLVTSLYKVISKVLASRLREVLGNTISQSQGAFVQKRQILDAVLVANEVV 548

[Close]

BLAST of ClCG10G007440 vs. ExPASy TrEMBL
Match: M5WJ76 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015871mg PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 4.8e-90
Identity = 201/588 (34.18%), Postives = 308/588 (52.38%), Query Frame = 0


Query: 674  KNIPQHLLGLGDKTKRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFV 733
            K I  ++ GLG + KR++VK+ ++RL P++V++ ETKK+I+D  LV  +W  +   W F 
Sbjct: 324  KIISWNIRGLGSRRKRLLVKEQLRRLKPDIVILLETKKEIVDRQLVAGVWGSRFKEWVFS 383

Query: 734  EAIGRSGGILTMWDESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLW 793
             ++GRSGGI  +W+   +SV   + G +S++++        +W++ +Y P   RER   W
Sbjct: 384  PSLGRSGGIAVLWNSQSVSVIDSMVGEFSVSIRIEENIGTDWWLSGIYGPCRQRERNSFW 443

Query: 794  AELQSLAAYCVEAWCIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGK 853
             EL  L  YC + WC+GGDFNV+R   E+  +GRV + MR FN+FI    L +  L N  
Sbjct: 444  EELADLYGYCGDMWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPILLNAS 503

Query: 854  FTWP--REGNVTSRSLLDRFLISSSWDDSFANTRNAL----------------------- 913
            FTW   RE  V  R  LDRFL+S SW++ F + R+                         
Sbjct: 504  FTWSNLRENAVCRR--LDRFLVSGSWEEHFPHYRHKALPRITSDHCPIELDTSRVKWGPS 563

Query: 914  ----------------------GTDNQHGWAGFVLSTKLRKVKSAVKAWNLNFENEKKKT 973
                                  G D   GW G+   T+L+ +KS +K W+     E+   
Sbjct: 564  PFRFENMWLNHPDFKRKIKLWWGEDQIPGWEGYKFMTRLKMLKSKLKVWS----KEEFGD 623

Query: 974  EEALIKEIEISELLIENSEDDGVGRDICLSLKADLLALYC-----IKERNLMQKSKLNWL 1033
             E  ++E E + LL+ +  +   G D  L  + D L L        +E    Q+ K+ W 
Sbjct: 624  VERDLREAE-ARLLVLDQREGTEGLDHLLRSERDNLLLKIGDLAQKEEVKWRQRGKVKWA 683

Query: 1034 SLGDENSKFFH----------------LEEV----------RSALKLL------------ 1093
              GD N+KFFH                +E++          R  ++              
Sbjct: 684  RDGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVDANIEREVIRFFKGLYSSNKNKAV 743

Query: 1094 ---GKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCITENFICLIQKKED 1153
               GK+K+ GPDGF++ FF   WE +K ++MK+ ++F+++G +N    E FICLI KK +
Sbjct: 744  FDCGKDKSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPKKAN 803

Query: 1154 AVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVV 1169
            +V V D+RPISL T LYK+++KV A  LR+V+ N I+ +  AF+ +RQILD+VL+ANEVV
Sbjct: 804  SVKVTDYRPISLVTSLYKVISKVLASSLREVLGNTISQSQGAFVQKRQILDAVLVANEVV 863

[Close]

BLAST of ClCG10G007440 vs. ExPASy TrEMBL
Match: A0A438JRF4 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_109 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.2e-88
Identity = 200/566 (35.34%), Postives = 292/566 (51.59%), Query Frame = 0


Query: 682  GLGDKTKRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFVEAIGRSGG 741
            GLG K KR +V++ +   NP++V++QETK++  D   V  +W  K + W+ + A G  GG
Sbjct: 750  GLGSKKKRRIVRRFLSTQNPDIVMLQETKRETWDRRFVSSVWKGKRVEWAALPACGALGG 809

Query: 742  ILTMWDESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLWAELQSLAA 801
            I+ +WD SK    + + G +S+TVK  +  + S W+T+VY P +   RK  W ELQ L  
Sbjct: 810  IVILWDSSKFECTEKVLGSFSVTVKFNSGEEGSCWLTSVYGPINPLWRKDFWLELQDLYG 869

Query: 802  YCVEAWCIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGKFTWPREGN 861
                 WC+GGDFNVIRRI E+L + R+   MR F+ FI  + L++ PL N  FTW     
Sbjct: 870  LTFPRWCVGGDFNVIRRISEKLGETRLTFNMRCFDEFIRESGLLDPPLRNAAFTWSNMQA 929

Query: 862  VTSRSLLDRFLISSSWDDSFANT-----------RNALGTDNQ----------------- 921
                  LDRFL SS WD  F+ +            N +  +                   
Sbjct: 930  DPICKRLDRFLFSSEWDTFFSQSFQEALPRWTSDHNPICLETNPLKWGPTPFRFENMWLL 989

Query: 922  -----------------HGWAGFVLSTKLRKVKSAVKAWNLNFENEKKKTEEALIKEIEI 981
                              GW G     KL+ VKS +K WN+    + K+ ++ ++ ++  
Sbjct: 990  HPEFKEKFRVWWLECTGEGWEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKKLILTDLSR 1049

Query: 982  SELLIENSEDDGVGRDICL--SLKADLLALYCIKER-NLMQKSKLNWLSLGDENSKFFHL 1041
             +L+    ++  +  D+ L  +LK   L    +KE     QKSK+ W+  GD NSKFFH 
Sbjct: 1050 IDLI---EQEGNLNSDLVLERTLKRRELEDVLLKEEVQWRQKSKVKWIKEGDCNSKFFHR 1109

Query: 1042 -------------------------------EEVRSALKLLGKNKARGPDGFTVEFFLKF 1101
                                           EEVR A+  L K KA GPDGFT+  + + 
Sbjct: 1110 VATGESWRVEGIDWVPISDESGVWLDRPFTEEEVRRAVFQLNKEKAPGPDGFTIAVYQEC 1169

Query: 1102 WEKLKDNIMKLFEEFYENGKLNSCITENFICLIQKKEDAVLVKDFRPISLTTMLYKLVAK 1161
            W+ +K+++M++F EF+ NG +N      FI L+ KK  +V + D+RPISL T LYK++AK
Sbjct: 1170 WDVIKEDLMRVFLEFHTNGVINQSTNATFIALVPKKSQSVKISDYRPISLVTSLYKIIAK 1229

Query: 1162 VFAERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVVEDYKSKKKKWWLLKLDLEKAFD 1169
            V + RLRKV+   I+ +  AF+  R ILD+VLIANEVV++ +   ++  + K+D EKA+D
Sbjct: 1230 VLSGRLRKVLHETISDSQGAFVEGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYD 1289

[Close]

BLAST of ClCG10G007440 vs. ExPASy TrEMBL
Match: A0A438CP96 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_30 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.0e-87
Identity = 200/572 (34.97%), Postives = 296/572 (51.75%), Query Frame = 0


Query: 682  GLGDKTKRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFVEAIGRSGG 741
            GLG K KR +V++ +   NP++V++QETK++  D   V  +W+ K + W  + A G SGG
Sbjct: 1665 GLGSKKKRRIVRRFLSTQNPDIVMLQETKRETWDRRFVSSVWTGKRVEWVALPACGASGG 1724

Query: 742  ILTMWDESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLWAELQSLAA 801
            I+ +WD SK    + + G +S+TVK  +  + SFW+T+VY P +   RK  W ELQ L  
Sbjct: 1725 IVILWDSSKFECTEKVLGSFSVTVKFNSGEEGSFWLTSVYGPINPLWRKDFWLELQDLYG 1784

Query: 802  YCVEAWCIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGKFTWPREGN 861
                 WC+GGDFNVIRRI E+L + R+   MR F+ FI  + L++ PL N  FTW     
Sbjct: 1785 LTFPRWCVGGDFNVIRRISEKLGESRLTFNMRCFDEFIRESGLLDPPLRNAAFTWSNMQA 1844

Query: 862  VTSRSLLDRFLISSSWDDSFANT-RNAL---GTDNQ------------------------ 921
                  LDRFL SS WD  F+ + + AL    +D+                         
Sbjct: 1845 DPICKRLDRFLFSSEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFENMWLL 1904

Query: 922  -----------------HGWAGFVLSTKLRKVKSAVKAWNLNFENEKKKTEEALIKEIEI 981
                              GW G     KL+ VK  +K WN+    + K+ ++ ++ ++  
Sbjct: 1905 HPEFKEKFRVWWQECTGEGWEGHKFMRKLKFVKLKLKKWNIMTFGDLKERKKLILTDLSR 1964

Query: 982  SELLIENSEDDGVGRDICL--SLKADLLALYCIKER-NLMQKSKLNWLSLGDENSKFFHL 1041
             +L+    ++  +  D+ L  +L+   L    +KE     QKS++ W+  GD NSKFFH 
Sbjct: 1965 IDLI---EQEGNLNPDLVLERTLRRKELEDVLLKEEVQWRQKSRVKWIKEGDCNSKFFHR 2024

Query: 1042 -------------------------------EEVRSALKLLGKNKARGPDGFTVEFFLKF 1101
                                           EEVR  +  L K KA GPDGFT+  + + 
Sbjct: 2025 VATGESWRVEGIDWVPISGESGVWLDRPFTEEEVRMTVFQLNKEKAPGPDGFTIAVYQEC 2084

Query: 1102 WEKLKDNIMKLFEEFYENGKLNSCITENFICLIQKKEDAVLVKDFRPISLTTMLYKLVAK 1161
            W+ +K+++M++F EF+ NG +N      FI L+ KK  +  + D+RPISL T LYK++AK
Sbjct: 2085 WDVIKEDLMRVFLEFHTNGVINQSTNATFIALVPKKSQSFKISDYRPISLVTSLYKIIAK 2144

Query: 1162 VFAERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVVEDYKSKKKKWWLLKLDLEKAFD 1175
            V + RLRKV+   I+ +  AF+  R ILD+VLIANEVV++ +   ++  + K+D EKA+D
Sbjct: 2145 VLSGRLRKVLHETISGSQGAFVEGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYD 2204

[Close]

BLAST of ClCG10G007440 vs. ExPASy TrEMBL
Match: A0A4Y1RS61 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_019005 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.4e-86
Identity = 187/541 (34.57%), Postives = 290/541 (53.60%), Query Frame = 0


Query: 688  KRMVVKQSIKRLNPNLVLIQETKKDIIDLVLVKELWSYKDIGWSFVEAIGRSGGILTMWD 747
            +++ VK+ ++RL P++V++ ETKK+I+D  LV  +W  +   W F  ++GRSGGI  +W+
Sbjct: 4    EKITVKEQLRRLKPDIVILLETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWN 63

Query: 748  ESKISVAQVLKGGYSLTVKCLTINKKSFWITNVYRPNDYRERKHLWAELQSLAAYCVEAW 807
               +SV   + G +S++++ +      +W++ +Y P   RER   W EL  L  YC + W
Sbjct: 64   SQSVSVIDSMVGEFSVSIRIVENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKW 123

Query: 808  CIGGDFNVIRRIQERLPQGRVIRGMRKFNNFITSAQLMEIPLSNGKFTWP--REGNVTSR 867
            C+GGDFNV+R   E+  +GRV + MR FN+FI    L +  L N  FTW   RE  V  R
Sbjct: 124  CLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRR 183

Query: 868  SLLDRFLISSSWDDSFANTRNAL------------------------------------- 927
              LDRFL+S SW+D F + R+                                       
Sbjct: 184  --LDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPSPFRFENMWLKHPDF 243

Query: 928  --------GTDNQHGWAGFVLSTKLRKVKSAVKAWNL----NFENEKKKTEEALI----- 987
                      D   GW G+   ++L+ +KS +K W+     + E + ++ E  L+     
Sbjct: 244  KRKIKLWWDEDQTPGWEGYKFMSRLKMLKSKLKVWSKEEFGDVERDLREAEARLLIGDLA 303

Query: 988  KEIEISELLIENSEDDGVGRDICLSLKADLLALYCIKERNLMQKSKLNWLSLGDENSKF- 1047
            ++ + +    E++E+ G G D                         LNW  +    + + 
Sbjct: 304  QKRKSNGAKEESNENAGWGVD------------------------GLNWCPISQTEADWL 363

Query: 1048 ---FHLEEVRSALKLLGKNKARGPDGFTVEFFLKFWEKLKDNIMKLFEEFYENGKLNSCI 1107
               F LEEV+ A+   GK+K+ GPDGF++ FF   WE +K ++MK+ ++F+++G +N   
Sbjct: 364  ERPFELEEVQKAVFDCGKDKSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVT 423

Query: 1108 TENFICLIQKKEDAVLVKDFRPISLTTMLYKLVAKVFAERLRKVMLNIIAPTPSAFIGER 1167
             E FICLI KK ++V V DFRPISL T LYK+++KV A RLR+V+ N I+ +  AF+ +R
Sbjct: 424  NETFICLIPKKANSVKVTDFRPISLVTSLYKVISKVLASRLREVLGNTISQSQGAFVQKR 483

Query: 1168 QILDSVLIANEVVEDYKSKKKKWWLLKLDLEKAFDWVDWTFLEKALIGKKFDPKWISWIM 1169
            QILD+VL+ANEVVE+ + + +K  + K+D EKA+D V+W F++  L  K F  KW  WI 
Sbjct: 484  QILDAVLVANEVVEEVRKQNRKGLVFKIDFEKAYDHVEWNFVDDVLARKGFGVKWRGWIF 518

[Close]

BLAST of ClCG10G007440 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-10
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 1086 ERLRKVMLNIIAPTPSAFIGERQILDSVLIANEVVEDYKSKK--KKWWLLKLDLEKAFDW 1145
            ERL+ +M N+I P  ++FI  R   D+++   E V   + KK  K W LLKLDLEKA+D 
Sbjct: 3    ERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAYDR 62

Query: 1146 VDWTFLEKALIGKKFDPKWI 1164
            + W +LE  LI   F   W+
Sbjct: 63   IRWDYLEDTLISAGFPEVWL 82

[Close]

BLAST of ClCG10G007440 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 4.8e-10
Identity = 87/399 (21.80%), Postives = 131/399 (32.83%), Query Frame = 0


Query: 811  GDFNVIRRIQER---LPQGRVIRGMRKFNNFITSAQLMEIPLSNGKFTWP--REGNVTSR 870
            GDF+ I    +    L     +RG+ +F N +  + L++IP     +TW   ++ N   R
Sbjct: 225  GDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIR 284

Query: 871  SLLDRFLISSSWDDSFANTRNA--LGTDNQH----------------------------- 930
              LDR + +  W  SF +      L   + H                             
Sbjct: 285  K-LDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPT 344

Query: 931  ---------------GWAGFVLSTKLRKVKSAVKAWN-LNFENEKKKTEEALIKEIEISE 990
                           G   F L   L+  K   K  N   F N + KT+EAL     I  
Sbjct: 345  FLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQS 404

Query: 991  LLIENSEDDGVGRDICLSLKADLLALYCIKERNLMQKSKLNWLSLGDENSKFFHL----- 1050
             L+ N  D     +     K +  A     E    QKS++ WL  GD N++FFH      
Sbjct: 405  QLLTNPSDSLFRVEHVARKKWNFFA--AALESFYRQKSRIKWLQDGDANTRFFHKVILAN 464

Query: 1051 ------------------------------------------------------------ 1081
                                                                        
Sbjct: 465  QAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCND 524

The following BLAST results are available for this feature:

BLAST of ClCG10G007440 vs. NCBI nr


Match Name	E-value	Identity	Description
VVA20479.1	3.4e-90	34.35	Hypothetical predicted protein, partial [Prunus dulcis]	[more]
RVX11537.1	2.4e-88	35.34	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
RVW25035.1	2.1e-87	34.97	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
BBH07150.1	3.0e-86	34.57	TatD related DNase [Prunus dulcis]	[more]
RVW64408.1	2.1e-84	33.12	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]

BLAST of ClCG10G007440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	3.5e-21	33.91	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P11369	1.3e-12	33.33	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
O00370	1.1e-11	31.06	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P08548	1.5e-11	32.30	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
Q03278	4.6e-05	21.88	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra...	[more]

BLAST of ClCG10G007440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5E4F090	1.6e-90	34.35	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3...	[more]
M5WJ76	4.8e-90	34.18	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A438JRF4	1.2e-88	35.34	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]
A0A438CP96	1.0e-87	34.97	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]
A0A4Y1RS61	1.4e-86	34.57	TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_019005 PE=4 SV=1	[more]

BLAST of ClCG10G007440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20520.1	1.3e-10	42.50	RNA binding;RNA-directed DNA polymerases	[more]
AT1G43760.1	4.8e-10	21.80	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1056..1174 e-value: 1.9E-19 score: 70.1
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 675..892 e-value: 3.3E-25 score: 91.2
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 684..884
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 994..1173
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 994..1173
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 988..1167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G007440.1	ClCG10G007440.1	mRNA