ClCG10G007220 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G007220
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Ras-related protein Rab-1A
Location	CG_Chr10: 10436685 .. 10440423 (-)
RNA-Seq Expression	ClCG10G007220
Synteny	ClCG10G007220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGTCTCTTACTTCACTCCCACTTTCTCTCCTTCGCTTTCGGTCCGAAGACTCCGTGAGAAAACCAAAGGACACAGATTTTCCCATTTTCGATTCAAGCCATGAGCAACGAATAGTATGTTATACTTGAAATTCAGTTCTTCATTTTTCAGTTTCTGAATTTTCCTTCCTCAATCGAACTCCTCAGATATCTTGTTACTTCTTTATGCTTTTTTCCCTTTCCCAGTGATTATTTGTTCAAGCTCTTGCTAATCGGCGACTCTTCCGTTGGAAAATCATGCCTTCTTCTCAGATTTGCGGTTAGTTCATTGTAGAACTTTTGATATCTGCTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTCGTTAATTTCATCAGTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTCTCTTTTTCGTTAATTTCATCAGTTTATGTATTGGATTGTGGAAATGGGTGATGATTTAGGGCTTTATCTCGGGTTTTTTTTAGGGGCTATCTTCATCAGTACAGCAAAAAGCTAATTGCTTTGTTTTTATTTTCCCTGTTTTTTCAGGATGATTCCTATGTGGATAGCTATATAAGTACAATTGGAGTTGATTTTGTGAGTCTCGAAACCGTTGCCATTCTTTTCTTTTTTAAAAAAATTGCAAATAGAGCTGTTATGGGCCATTGCCTGTGTATTTTACTCCTTATGGCTAATCTTCTGTGATTTGTTTTCAGAAAATCAGAACGGTGGAACTGGATGGGAAGACCATTAAGCTCCAGATTGTGAGTGGGCTTGCACAGTTTCTTGTTTTTATAAATTTTCTTTCTTATTCATAGTGGGTATTTATCTTGCGTGATTAAACATTTAATGGCCTTAGTGACTTGTGAGAGCTTATACATCTGGGAAATAAACTTTTTTTTTTGTCCTGGTTTTAGATACTGACTGAAGCTTAGCTTTTCATCTATTCAATTCAGTTGCATGTTCCTATATATATTTATGTATGTATGTATATATGATCTTGTAACCTGCTGTTACTTTCTAGTGCTCTGGCTAAAAGTAAGCCTTTTTGTGATGAAAGGTTAAAACAATTTTCTTTTTTTCAGTTTCTCTATTAATATGAAACTTAAATTTCAGACAACATCCATCATCTTGGTACAAGTCAGATGCTTTACTTCGAAATAGGTTGTGGTGTTGCTATTTTATCCATTTCAGTCATATTTTACATGCCAGATTCCATCTTCTATGCAAGTCTATCTGACATAAAAGCTGTTGTAATTATTAATAGACGAACAGGAAATGCTGGATAATGTTGCTATGCAAACATTGGGGATATGAAAGTGAATGTGCAGTTACCTTTACAATTATTGTTGACTGTCTGTCTTCCCTTTTTTTATGAAAGCTGTTTTCCTCATCATTTCAAGGACTGTTGAAACCTAATTTGATATGCAGAAGACTGGACTGATTCTATTGTTTTATTCTTTTTAGTGGGACACTGCTGGTCAGGAGAGATTCAGGACTATAACGAGCAGCTATTACAGAGGTGCACATGGAATAATTGTAAGAATCTTCCCTGTTAAGTTCAGGGATCAAACTTTAGTATGGTGAATTTATGAGATCTCTCTCATATTTATTCTTAGCATGTAGCTTAGATTAGAACTGTAGTTTCATGGCTCTTGATTGGAAGATTTTGTTCGAATGTCATATTGTTATTAGCACTATCAGCCCTTAAGCTAATATCAGCTTGTATTCGTTGTGCTGTGGAAAAAATGAGCCAATATCTAGTTAACTTGGGAGGATGCATTCTGATTTCTTAAAATAGCTCGCCTAGAAAGTGAATTGGGGATTGTTTTTTGTTTGTTTCTTTTTTGGGTCAGGTTCATTAGTTGACTTTTACGTCAAAGCATTGCATCGTTATTACTATATTTTGTTTGAATTGCAACAGATTGTTTATGATGTCACTGAGATGGAGAGCTTTAACAACGTCAAGCAATGGTTGAATGAGATTGATAGATATGCTAATGATACTGTATGCAAGCTTTTAGTTGGAAATAAGTGCGATTTAGTTGAGAACAAGGTTGTCGACACACAGACAGCAAAGGTATAATTTTTATTTTAGCTGTGCCATAATTCTTAAACTTCAACTTTTCTTTTCGTTTGCTTCCACTTTAAGTTTTTCGGCAGGACCAGCCTATTAATATTTCAGTGTTTTGGCACCACAATTTTCTTGTTCCGTGTATACTCAACGAGTGATTTAAAAGGAATACAAATTTTTAGCAAGTTCATTTAGCCACATTTGATCAAATGTTCCCATTATTTTCAATGACCTTCAATGTAAATCGAGTGTACTTTTGTTTCTTCACTTCAAGTTCTAATATCATTCTGTCAAGTATCATTAGTTTTAGGTCTTGTCCCTGTCTCGCTCATGACCTTGCCTCTTCCACCTGCTTACTTCTCCTTGGCCTGCCCTCGAGAATATAGAAGATAAGTTAACTTAATACTTGATTTATTGTATTTTCCTCTTCATGGATGGATTGCAGGCATTTGCAGATGAGCTCGGAATCCCTTTTCTAGAGACGAGTGCCAAAGACTCTATCAACGTTGAACAAGCTTTCTTAACTATGGCTGCTGAAATAAAGAAAAAGTAATGACCATTCTTCCCGTTACTTTTCCCCCTGGCCCTTTTATAATTTTAATATTGTGGCATGATGTTTTTATTCCCCATTTTTTTTCTTGGCTTTTGCTCATTCAATATCGTTGAAAAATTCAATAGTATAGTTCTATCAAGCTGCTTATCTGGAAAGTGGACTTCTTCCATTATTGGCTTAATGTTGAATCTCTCTCTCGTAATGCTTCGTTTCTGACCTTTGAAAATGTATTTTAGGATGGGGAGCCAGCCAACTTCGTCCAAGTCGTCAGGAAATGTGCAAATGAAGGGACAGCCAATTGAGCAAAAGAGCAGCTGTTGCAGTTGAGCACTTTCTCACGCCTAATTATATAATGGTAAAATCTAAGTTAACAAGTTTCTTAAGATGATGAAATTGTCTTTACTTTGTTGTTGGGTCAAGGATCTCTATGTAATTGTGAATTATTCCCTGTTTGAATCCTTCTGTGTATAAATGCTTTATGACAGTCACCTTTGGATACTCTCTCCCTCTCCCAATCATTTCTAAGTACTAAAGTCTAAAGAGAATTATGTCAGTGTAGTTTGGAGTAAAGAAAATCATTCTGACATTCAACGACCATAGTTGTTTCGTCATGTCATGTCTGAGCCACATCACTGTTTCTTGGATTAGGCATGCCTTTCCTTAGTTCATGAATCATGTCTAAGTCGAGGATTGTCGAGCTCAGACGTTATTGACTTGTGATATGGCTGCCCATTTTCTCTAACATGATTGACGATTTGATTTTAATGTATAGACCCGTCATCTCAAGTCTTTATAACTATTTTAATCGGAGGTAAGAGTACGTATATAATATTGAAAGCCTTCATTGGATCTTAGTTGAATTTTATAAGTGGGCAGTTTGTCATAT

mRNA sequence

CGGGTCTCTTACTTCACTCCCACTTTCTCTCCTTCGCTTTCGGTCCGAAGACTCCGTGAGAAAACCAAAGGACACAGATTTTCCCATTTTCGATTCAAGCCATGAGCAACGAATATGATTATTTGTTCAAGCTCTTGCTAATCGGCGACTCTTCCGTTGGAAAATCATGCCTTCTTCTCAGATTTGCGGATGATTCCTATGTGGATAGCTATATAAGTACAATTGGAGTTGATTTTAAAATCAGAACGGTGGAACTGGATGGGAAGACCATTAAGCTCCAGATTTGGGACACTGCTGGTCAGGAGAGATTCAGGACTATAACGAGCAGCTATTACAGAGGTGCACATGGAATAATTATTGTTTATGATGTCACTGAGATGGAGAGCTTTAACAACGTCAAGCAATGGTTGAATGAGATTGATAGATATGCTAATGATACTGTATGCAAGCTTTTAGTTGGAAATAAGTGCGATTTAGTTGAGAACAAGGTTGTCGACACACAGACAGCAAAGGCATTTGCAGATGAGCTCGGAATCCCTTTTCTAGAGACGAGTGCCAAAGACTCTATCAACGTTGAACAAGCTTTCTTAACTATGGCTGCTGAAATAAAGAAAAAGATGGGGAGCCAGCCAACTTCGTCCAAGTCGTCAGGAAATGTGCAAATGAAGGGACAGCCAATTGAGCAAAAGAGCAGCTGTTGCAGTTGAGCACTTTCTCACGCCTAATTATATAATGGTAAAATCTAAGTTAACAAGTTTCTTAAGATGATGAAATTGTCTTTACTTTGTTGTTGGGTCAAGGATCTCTATGTAATTGTGAATTATTCCCTGTTTGAATCCTTCTGTGTATAAATGCTTTATGACAGTCACCTTTGGATACTCTCTCCCTCTCCCAATCATTTCTAAGTACTAAAGTCTAAAGAGAATTATGTCAGTGTAGTTTGGAGTAAAGAAAATCATTCTGACATTCAACGACCATAGTTGTTTCGTCATGTCATGTCTGAGCCACATCACTGTTTCTTGGATTAGGCATGCCTTTCCTTAGTTCATGAATCATGTCTAAGTCGAGGATTGTCGAGCTCAGACGTTATTGACTTGTGATATGGCTGCCCATTTTCTCTAACATGATTGACGATTTGATTTTAATGTATAGACCCGTCATCTCAAGTCTTTATAACTATTTTAATCGGAGGTAAGAGTACGTATATAATATTGAAAGCCTTCATTGGATCTTAGTTGAATTTTATAAGTGGGCAGTTTGTCATAT

Coding sequence (CDS)

ATGAGCAACGAATATGATTATTTGTTCAAGCTCTTGCTAATCGGCGACTCTTCCGTTGGAAAATCATGCCTTCTTCTCAGATTTGCGGATGATTCCTATGTGGATAGCTATATAAGTACAATTGGAGTTGATTTTAAAATCAGAACGGTGGAACTGGATGGGAAGACCATTAAGCTCCAGATTTGGGACACTGCTGGTCAGGAGAGATTCAGGACTATAACGAGCAGCTATTACAGAGGTGCACATGGAATAATTATTGTTTATGATGTCACTGAGATGGAGAGCTTTAACAACGTCAAGCAATGGTTGAATGAGATTGATAGATATGCTAATGATACTGTATGCAAGCTTTTAGTTGGAAATAAGTGCGATTTAGTTGAGAACAAGGTTGTCGACACACAGACAGCAAAGGCATTTGCAGATGAGCTCGGAATCCCTTTTCTAGAGACGAGTGCCAAAGACTCTATCAACGTTGAACAAGCTTTCTTAACTATGGCTGCTGAAATAAAGAAAAAGATGGGGAGCCAGCCAACTTCGTCCAAGTCGTCAGGAAATGTGCAAATGAAGGGACAGCCAATTGAGCAAAAGAGCAGCTGTTGCAGTTGA

Protein sequence

MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGNVQMKGQPIEQKSSCCS

Homology

[Close]

BLAST of ClCG10G007220 vs. NCBI nr
Match: XP_008452238.1 (PREDICTED: ras-related protein RABD1 isoform X1 [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 9.8e-106
Identity = 197/201 (98.01%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDTQTAKAFA+ELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS
Sbjct: 121 NKCDLVENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
           KSSGNVQMKGQPI+QKSSCCS
Sbjct: 181 KSSGNVQMKGQPIQQKSSCCS 201

[Close]

BLAST of ClCG10G007220 vs. NCBI nr
Match: XP_004133726.1 (ras-related protein RABD1 [Cucumis sativus] >KGN56267.1 hypothetical protein Csa_009820 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 9.8e-106
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDS NVEQAFLTMAAEIKKKMGSQPTSS
Sbjct: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSS 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
           KSSGNVQMKGQPI+QKSSCCS
Sbjct: 181 KSSGNVQMKGQPIQQKSSCCS 201

[Close]

BLAST of ClCG10G007220 vs. NCBI nr
Match: XP_022929522.1 (ras-related protein RABD1-like [Cucurbita moschata] >XP_022985018.1 ras-related protein RABD1-like [Cucurbita maxima] >XP_023551876.1 ras-related protein RABD1-like [Cucurbita pepo subsp. pepo] >KAG6577361.1 Ras-related protein RABD1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015448.1 Ras-related protein RABD1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.3 bits (1004), Expect = 4.9e-105
Identity = 196/201 (97.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKT+KLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTVKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDT+TAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+SS
Sbjct: 121 NKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSS 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
            SSGNVQMKGQPIEQKSSCCS
Sbjct: 181 MSSGNVQMKGQPIEQKSSCCS 201

[Close]

BLAST of ClCG10G007220 vs. NCBI nr
Match: XP_022136911.1 (ras-related protein RABD1 [Momordica charantia])

HSP 1 Score: 389.4 bits (999), Expect = 1.8e-104
Identity = 196/201 (97.51%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDTQTAKA ADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+S+
Sbjct: 121 NKCDLVENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSST 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
           KSSG VQMKGQPIEQKSSCCS
Sbjct: 181 KSSGTVQMKGQPIEQKSSCCS 201

[Close]

BLAST of ClCG10G007220 vs. NCBI nr
Match: XP_021663643.1 (ras-related protein RABD1 isoform X1 [Hevea brasiliensis] >XP_021663645.1 ras-related protein RABD1 isoform X3 [Hevea brasiliensis] >XP_021686139.1 ras-related protein RABD1 [Hevea brasiliensis])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 192/200 (96.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMA EIKKKMGSQPT+S
Sbjct: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGSQPTAS 180

Query: 181 KSSGNVQMKGQPIEQKSSCC 201
           KS+G VQMKGQPI+QK++CC
Sbjct: 181 KSTGTVQMKGQPIQQKNNCC 200

[Close]

BLAST of ClCG10G007220 vs. ExPASy Swiss-Prot
Match: Q9ZRE2 (Ras-related protein RABD1 OS=Arabidopsis thaliana OX=3702 GN=RABD1 PE=1 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.3e-92
Identity = 170/202 (84.16%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYD TEMESFNNVKQWL+EIDRYAN++VCKLL+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NK D+VE+KVV T+T +A ADELGIPFLETSAKDSINVEQAFLT+A EIKKKMGSQ  ++
Sbjct: 121 NKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNAN 180

Query: 181 KSS--GNVQMKGQPIEQKSSCC 201
           K+S  G VQMKGQPI+Q +  C
Sbjct: 181 KTSGPGTVQMKGQPIQQNNGGC 202

[Close]

BLAST of ClCG10G007220 vs. ExPASy Swiss-Prot
Match: P40392 (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 SV=2)

HSP 1 Score: 323.9 bits (829), Expect = 1.3e-87
Identity = 160/202 (79.21%), Postives = 179/202 (88.61%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           M+ EYDYLFKLLLIGDS VGKSCLLLRFADDSY++SYISTIGVDFKIRTVE DGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVT+ ESFNNVKQWLNEIDRYA++ V KLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP-TS 180
           NKCDL EN+VV  +  KA ADE+GIPFLETSAKD+ NVE+AF+TMA EIK +M SQP T+
Sbjct: 121 NKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATN 180

Query: 181 SKSSGNVQMKGQPIEQKSSCCS 202
           +     VQM+GQP+ Q+SSCCS
Sbjct: 181 ASKPATVQMRGQPVAQQSSCCS 202

[Close]

BLAST of ClCG10G007220 vs. ExPASy Swiss-Prot
Match: Q9SEH3 (Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.1e-87
Identity = 158/201 (78.61%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           M+ EYDYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ YDVT++ESFNNVKQWLNEIDRYA++ V KLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDL   KVV T+TAKAFADELGIPFLETSAK++ NVE+AF+ M A IK +M SQP   
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
                VQ++GQP+ Q+S CCS
Sbjct: 181 SKPPTVQIRGQPVNQQSGCCS 201

[Close]

BLAST of ClCG10G007220 vs. ExPASy Swiss-Prot
Match: Q05737 (GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.8e-87
Identity = 161/202 (79.70%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           M+ EYDYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVT+ ESFNNVKQWLNEIDRYA+D V KLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NK DL  NKVV T+TAKAFADE+GIPF+ETSAK++ NV+QAF+ MAA IK +M SQP ++
Sbjct: 121 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAA 180

Query: 181 KS-SGNVQMKGQPIEQKSSCCS 202
            +    VQ++GQP+ QK+SCCS
Sbjct: 181 NARPATVQIRGQPVNQKTSCCS 202

[Close]

BLAST of ClCG10G007220 vs. ExPASy Swiss-Prot
Match: P16976 (GTP-binding protein YPTM1 OS=Zea mays OX=4577 GN=YPTM1 PE=2 SV=2)

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-86
Identity = 164/207 (79.23%), Postives = 183/207 (88.41%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNE+DYLFKLLLIGDSSVGKSC LLRFADDSYVDSYISTIGVDFKIRTVE++GKT+KLQ
Sbjct: 1   MSNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYD+T+MESFNNVKQWL+EIDRYAND+V KLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKK-KMGSQPTS 180
           NKCDL EN+ VDT  A+A+A E+GIPFLETSAK+SINVE+AFL M+A IKK K GSQ   
Sbjct: 121 NKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAAL 180

Query: 181 SKSSGN-VQMKGQPIEQK----SSCCS 202
            +   N VQMKG+PI+Q+    S CCS
Sbjct: 181 ERKPSNVVQMKGRPIQQEQQKSSRCCS 207

[Close]

BLAST of ClCG10G007220 vs. ExPASy TrEMBL
Match: A0A0A0L6Q4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110640 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.7e-106
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDS NVEQAFLTMAAEIKKKMGSQPTSS
Sbjct: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSS 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
           KSSGNVQMKGQPI+QKSSCCS
Sbjct: 181 KSSGNVQMKGQPIQQKSSCCS 201

[Close]

BLAST of ClCG10G007220 vs. ExPASy TrEMBL
Match: A0A1S3BTF1 (ras-related protein RABD1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493312 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.7e-106
Identity = 197/201 (98.01%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDTQTAKAFA+ELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS
Sbjct: 121 NKCDLVENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
           KSSGNVQMKGQPI+QKSSCCS
Sbjct: 181 KSSGNVQMKGQPIQQKSSCCS 201

[Close]

BLAST of ClCG10G007220 vs. ExPASy TrEMBL
Match: A0A6J1JCC5 (ras-related protein RABD1-like OS=Cucurbita maxima OX=3661 GN=LOC111483110 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105
Identity = 196/201 (97.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKT+KLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTVKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDT+TAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+SS
Sbjct: 121 NKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSS 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
            SSGNVQMKGQPIEQKSSCCS
Sbjct: 181 MSSGNVQMKGQPIEQKSSCCS 201

[Close]

BLAST of ClCG10G007220 vs. ExPASy TrEMBL
Match: A0A6J1EMZ9 (ras-related protein RABD1-like OS=Cucurbita moschata OX=3662 GN=LOC111436063 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105
Identity = 196/201 (97.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKT+KLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTVKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDT+TAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+SS
Sbjct: 121 NKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSS 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
            SSGNVQMKGQPIEQKSSCCS
Sbjct: 181 MSSGNVQMKGQPIEQKSSCCS 201

[Close]

BLAST of ClCG10G007220 vs. ExPASy TrEMBL
Match: A0A6J1C4U5 (ras-related protein RABD1 OS=Momordica charantia OX=3673 GN=LOC111008488 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.0e-105
Identity = 196/201 (97.51%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYAND+VCKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDLVENKVVDTQTAKA ADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+S+
Sbjct: 121 NKCDLVENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSST 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
           KSSG VQMKGQPIEQKSSCCS
Sbjct: 181 KSSGTVQMKGQPIEQKSSCCS 201

[Close]

BLAST of ClCG10G007220 vs. TAIR 10
Match: AT3G11730.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 340.5 bits (872), Expect = 9.2e-94
Identity = 170/202 (84.16%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           MSNEYDYLFKLLLIGDSSVGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYD TEMESFNNVKQWL+EIDRYAN++VCKLL+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NK D+VE+KVV T+T +A ADELGIPFLETSAKDSINVEQAFLT+A EIKKKMGSQ  ++
Sbjct: 121 NKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNAN 180

Query: 181 KSS--GNVQMKGQPIEQKSSCC 201
           K+S  G VQMKGQPI+Q +  C
Sbjct: 181 KTSGPGTVQMKGQPIQQNNGGC 202

[Close]

BLAST of ClCG10G007220 vs. TAIR 10
Match: AT4G17530.1 (RAB GTPase homolog 1C )

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-88
Identity = 158/201 (78.61%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           M+ EYDYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ YDVT++ESFNNVKQWLNEIDRYA++ V KLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NKCDL   KVV T+TAKAFADELGIPFLETSAK++ NVE+AF+ M A IK +M SQP   
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
                VQ++GQP+ Q+S CCS
Sbjct: 181 SKPPTVQIRGQPVNQQSGCCS 201

[Close]

BLAST of ClCG10G007220 vs. TAIR 10
Match: AT5G47200.1 (RAB GTPase homolog 1A )

HSP 1 Score: 318.2 bits (814), Expect = 4.9e-87
Identity = 157/201 (78.11%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           M+ EYDYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+ YDVT++ESFNNVKQWLNEIDRYA++ V KLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NK DL   KVV T+TAKAFADELGIPFLETSAK++ NVE+AF+ M A IK +M SQP   
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 KSSGNVQMKGQPIEQKSSCCS 202
                VQ++GQP+ Q+S CCS
Sbjct: 181 AKPPTVQIRGQPVNQQSGCCS 201

[Close]

BLAST of ClCG10G007220 vs. TAIR 10
Match: AT1G02130.1 (RAS 5 )

HSP 1 Score: 315.1 bits (806), Expect = 4.1e-86
Identity = 156/202 (77.23%), Postives = 178/202 (88.12%), Query Frame = 0


Query: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQ 60
           M+ EYDYLFKLLLIGDS VGKSCLLLRF+DDSYV+SYISTIGVDFKIRTVE DGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIIVYDVT+ ESFNNVKQWL+EIDRYA+D V KLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120

Query: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSS 180
           NK DL EN+ +  +TAKAFADE+GIPF+ETSAKD+ NVEQAF+ M+A IK++M SQP  +
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180

Query: 181 KS-SGNVQMKGQPIEQKSSCCS 202
            +    VQ++GQP+ QK+ CCS
Sbjct: 181 NARPPTVQIRGQPVAQKNGCCS 202

[Close]

BLAST of ClCG10G007220 vs. TAIR 10
Match: AT3G09900.1 (RAB GTPase homolog E1E )

HSP 1 Score: 237.7 bits (605), Expect = 8.4e-63
Identity = 120/207 (57.97%), Postives = 156/207 (75.36%), Query Frame = 0


Query: 3   NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
           ++YDYL KLLLIGDS VGKSCLLLRF+DD++  S+I+TIG+DFKIRTVELDGK IKLQIW
Sbjct: 10  SDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIW 69

Query: 63  DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVGNK 122
           DTAGQERFRTIT++YYRGA GI++VYDVT+  SFNN++ W+  I+++A+D+V K+LVGNK
Sbjct: 70  DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNK 129

Query: 123 CDLVENK-VVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSK 182
            D+ E+K  V T   +A ADE GI F ETSAK + NVEQ FL++A +IK+++    T ++
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAE 189

Query: 183 SSGNVQMK-------GQPIEQKSSCCS 202
             G    K            +KS+CCS
Sbjct: 190 PQGIKITKQDANKASSSSTNEKSACCS 216

The following BLAST results are available for this feature:

BLAST of ClCG10G007220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452238.1	9.8e-106	98.01	PREDICTED: ras-related protein RABD1 isoform X1 [Cucumis melo]	[more]
XP_004133726.1	9.8e-106	98.51	ras-related protein RABD1 [Cucumis sativus] >KGN56267.1 hypothetical protein Csa...	[more]
XP_022929522.1	4.9e-105	97.51	ras-related protein RABD1-like [Cucurbita moschata] >XP_022985018.1 ras-related ...	[more]
XP_022136911.1	1.8e-104	97.51	ras-related protein RABD1 [Momordica charantia]	[more]
XP_021663643.1	2.0e-103	96.00	ras-related protein RABD1 isoform X1 [Hevea brasiliensis] >XP_021663645.1 ras-re...	[more]

BLAST of ClCG10G007220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZRE2	1.3e-92	84.16	Ras-related protein RABD1 OS=Arabidopsis thaliana OX=3702 GN=RABD1 PE=1 SV=1	[more]
P40392	1.3e-87	79.21	Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 S...	[more]
Q9SEH3	2.1e-87	78.61	Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1	[more]
Q05737	2.8e-87	79.70	GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1	[more]
P16976	1.1e-86	79.23	GTP-binding protein YPTM1 OS=Zea mays OX=4577 GN=YPTM1 PE=2 SV=2	[more]

BLAST of ClCG10G007220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6Q4	4.7e-106	98.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110640 PE=4 SV=1	[more]
A0A1S3BTF1	4.7e-106	98.01	ras-related protein RABD1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493312 PE=...	[more]
A0A6J1JCC5	2.4e-105	97.51	ras-related protein RABD1-like OS=Cucurbita maxima OX=3661 GN=LOC111483110 PE=4 ...	[more]
A0A6J1EMZ9	2.4e-105	97.51	ras-related protein RABD1-like OS=Cucurbita moschata OX=3662 GN=LOC111436063 PE=...	[more]
A0A6J1C4U5	9.0e-105	97.51	ras-related protein RABD1 OS=Momordica charantia OX=3673 GN=LOC111008488 PE=4 SV...	[more]

BLAST of ClCG10G007220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11730.1	9.2e-94	84.16	Ras-related small GTP-binding family protein	[more]
AT4G17530.1	1.5e-88	78.61	RAB GTPase homolog 1C	[more]
AT5G47200.1	4.9e-87	78.11	RAB GTPase homolog 1A	[more]
AT1G02130.1	4.1e-86	77.23	RAS 5	[more]
AT3G09900.1	8.4e-63	57.97	RAB GTPase homolog E1E	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 9..30 score: 54.21 coord: 112..125 score: 52.86 coord: 147..169 score: 46.53 coord: 32..48 score: 35.74 coord: 50..72 score: 59.25
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..173 e-value: 0.0048 score: -0.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..172 e-value: 4.4E-38 score: 142.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..199 e-value: 2.6E-5 score: 26.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..172 e-value: 4.1E-110 score: 381.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..201
None	No IPR available	PANTHER	PTHR47977:SF6	RAS-RELATED PROTEIN RABD2A-LIKE	coord: 5..201
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 5..201
None	No IPR available	PROSITE	PS51420	RHO	coord: 2..170 score: 10.256716
None	No IPR available	PROSITE	PS51419	RAB	coord: 4..200 score: 39.314346
None	No IPR available	CDD	cd01869	Rab1_Ypt1	coord: 7..172 e-value: 1.372E-125 score: 349.32
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 11..170 e-value: 2.3E-16 score: 70.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 10..170 e-value: 2.1E-65 score: 219.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..201 score: 21.705969
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..164 e-value: 6.9E-35 score: 118.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..200 e-value: 3.8E-78 score: 263.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G007220.2	ClCG10G007220.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding