ClCG10G007200 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G007200
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Ty3-gypsy retrotransposon protein
Location	CG_Chr10: 10358340 .. 10368662 (-)
RNA-Seq Expression	ClCG10G007200
Synteny	ClCG10G007200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGAAATTTGAGTTGCAGATCGTCTGATTTCGTGTTGTTTTCGGCTTCGCTTTCCCTACTTTTCGTCTCCGGTATCTCCTTCAGATCTCTCTTTCTTGTCTCTTGCTTTGTTCGATTTTATTCGATTTCTGTGATCCCTCCATTGATTTGATGCAATTTGTTTTTTCTTCTTTGTTTTGCTGATTCTGTTACTGGAAACTCTTGATGTGAATTGAATGACGGGGATGCAATTGGCTATTTTTCATTAATTCTGTGTCGAGATCTTGTTTTTGTTTGGTTTTTAATCTTCTCGCTGTTAATTATTTGAATAAGTCCTTTGGTATCTTTGTTGTTTCTTTATGTTTTCTCAGTTAAAATAGTGTTTTCAGAACTTTATCATTGGTGTTTGAATGATTGTTGGTTGCTGAATTACGATCTCAGGGGATGTGCAATTAGTGAATCTCAATTTCGAAATAGGACAGCGAGCCAAGAAAATGCACGAAATACTAGTACTACTTAATCCGTATTTTTTCAAAAAGAAGTTTCCATGTTGACATAAAAAATTAACTTCTTGTACAATTTTTCATTGAAGAAAATGGAGTTAACGTGTGCTAAAGCAGCCATAAACTTTGTTCATTCAATAGCTATGCCCTGTTTTGCTCAATGAAAATGAAATGTGGAGTTTTGGTCCATCTCTGGCTTGGATATTTATTTCCTTCAAACCCGCACTCATTTTTTAAAATTTATTTACTCAAAAAAGGAGATTCAAGGATGCAATAGTCTATTAGTATTTTACCTCTTTAGATTCCAAACCTCACATGGTTACTTTTTCTTTTTGTGCATCTCCCATTATCTTTTATCTCGAAATGAATTTTGTTGTCGAATGATAGATATCCAGTTATCAATTAGTACGTATTGAGTCATTAATACTTACTTTTGCAGCTATCTCTTAACACTTCTTTTGGTTGGCTACTACAGCCCTTTCTGATGATTCCAGTAACAAAGCTAGTATTAAATCTGGGAATCATCCATCCTCCAGCAGCAACACTGGCTCGATGGTTGCCATCATCCTCTTTGGGATTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAGTTATGGCAAAAGAAAAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAACTTGAGGTTGAACTTGGTCTTCGGGATTGAAGAATATCTGAAATTCTAGATCACTGAAGTTTGGTATGTCATTAATCTCGTCATCCCTTTATTTCTTACCTGAAAATTGAAATAGCTTACTTCATATTGATATGCTGGAGTGGGTATGTCATGTCTAGTAGATGATATGGTTGCCCATGATGAATACAGTATGAGCAAAATATATCTAGTGGGATATGTATGTTTTTATCGATGGCTGCATGACCCATAGTTCTTTTTCTTTGATTTATCTCATTCATCTCTATGTTGTCATTAAGTTCTTATTTTCCATGGGAGTAGTACGTAAAATGATATTTAAAACAACAAATAGTTTTGATTCGGATAGTTAAATGAGATATTAATTTTCTTTGGAAAAAGAAATGATCATTTTATTGAAAAATGAAATATGTACAAAAGGGTACGGTCCCGAGGCCCAATTATGAAGGGACGTTCCACTTGGCCAAAAGTATCGAGATGCATAGAGACTGAAAGAAAGAGGGCTTGCATTTTATGCACCAATATGGAGCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGATTACAAAATGTTGTCAAAAGGATCATATGTCTTCTATATGTATTGCTGGCATTTCATATGAAAAAGAATTGTTGGCATGTTTTATGCCAAGAGGTATGCATAATGCTTATATGTGCATTTATATAGGAGATTCCTCAGTTTCGCATCTTACATTTCTTCATTCTGGAGCCATTTTTACATCCTAAAAGGCTAAAATTCTTTCTACAGATAGAACAATTCCTACCTTTCCTGTTTTCTCATCGTCTCCCATTTTTTCCTTCTTTGCCGACCTTTCTAATGTAAGTTTGATTCTCTCATCTTGGCGTGAACTTACAACTTACGATTAAAAACTCTTATAGTGGAAGTGGAAAAGTCTGACATAGTGTTTTGAAAAGTAAATAGCTTCCTGAGAGACTAAGCAGAAGGTGCTAGGTGGGGCGAGACTGAGTAAGACGAGACAATATATCTACTTAAGCTTTCAAGTAATATTCATAAAAGAATATCTATTTTGATCGTAGGGATGTTTTTCTATTTAGGAAATATATTATTAATAGGAAAAGTGGATAGATGGAGAGGTGTCATGTTGAGCACCGCCAAGAGATAAGGCGTTCTACCAATTGGTATTCATAAAAATGAATCTAATTACAAAATAACTTGGAGAACTCCATGAAGAACCGTTAAATACTTTCCGTAATTTAGCCATAAGAACATTTTCCCACAAAAGTTTCGCATTTCATTTGAAGAGATATCCAGAAAGAGCTGTTCAATGCAAGAGCATCCCCTGTAAACACCAGAAAATACCAACTTCATTTGGGTATGTTTGGTTCGAGGAGTAGGAGTTGGGGGAGTGGAGTTTGGTCCAAAGAGTAGGAGTTAACTCTACTCCTTTTCTGGCCCAAAGAGTTCTTAAGCTCAATGTGGGCCTAGAACTAAAATAACATCAATTCCACGACTTAGTAACTCCTTACATTGTGGCTCATAACTAAATAACTCTTTAGACTTAACAACTCTCGAGATTAAACATTTACACTTCTTGTCCCAACACCTTCTAAGAAGCTAATGCCAATAGTTTGTGGCATAAGACCCGAAATAAAATAGTTAACTTTGATTCTCCTAATTCTTACTGCACAATGCCTTTGGACTCTGTCTGTTGTATTAACTCTACCCAAAGCTGGAGTCCGCAGGAAAATATAATTTTCTTAGAGGCCTGTTTCCATGACTTCTCTGAGTATTCAAAGTAAAGGATTCTCCTTTGTTTGGTACTTAGAGAAGGACATTCATCTGTTGCACACATGAAGAAAACAGGTAACACCATAACAGGTGTTAGAACAGTTCAAAAAAAAAAAAAAAAAAAAATTGTCATTCCCCAGGCACATCTTTGTGGCTGAGTTGAGCTCAAGTGCGCTAAATCTTCCATTTTAAAAATCGGGCATAAGTGTAGGTGATTAATTCAGGTGTACATAGAAGATGATATTGCAACCAAAGCTAGTTGGACTATTTACATTTTCAGCGACTTCATGGTTTAATCCTCTAGTTCTCACTGTTGTATTGCTTATTATACTCTTTAAGGGGTTGTTTGGCGCTGAGTTGATTTCATATGTTTGTGGAGATCATGTCTTTGTTTTGGTGTTCGGGGTGTTGAGTTCATATGTCAGGCGTATCTGGTGCAGTTTTATATATGTGTATATATATATAATCTGTTTTTATGATGATTATTTTTGTTTGGAAATTTTTTATTTAATAATTTTACATAGATGTTTTTAATAAACTATAGATTGCACTTTACATTATTGTTTTTTAAACACACATATATTGTTAGGAGTTTTGGAAAATGAAGTTTAGGATTTACTTTTGGACCATGCATTTCAAATTTTTTTTTTTTTTTAATTTTTTTTATTTAAGCAATCATTTTACTAATTTGTGCATGTGACATTTATAGTTAAGTTATTCTTATGTTAACACTTTTGATAAAAAAATTTTAAAATAAAAACATTTATGTATTTGACAATTTTTCTCGCTAAGTGTTTTTACATACAAGCTTGTTTGATATCTTACATGATTAAAGTGATTTTATTAATGTTAAATTACTATAAAGAACGACTATAAAATGCTATGAACTAATAAAAGAAATTGGAAATTCAACATTTTGACGGAACTTACGTAGTTTTGTGTCAACAAAGATGTTTTTATTGACAATTTTGTGCGTCAAACTTAAATATAAACATTTATTGATGTTTTATACGTATTTTTAAATTAGTAATTATTTTTAAGTTTTAAATTAAGATTTTATTGACGGTTTATGTCACGAGCGTCAACAAAACAAAAAACTCATGTGTCAACATAGCCCAACTTTATAGTAGTCATAATGTAAAATAATGGTTGTCGGAGTTGGTTGAGTGGGCATCGTCGAAGGTTGCTAGAGTTGGCCATCAACCGTGGTGATTGAAGTTGGCTATAGGCGGTGGTTGCCGGAGTTGGCTATCGAAGGTGGTCGTGGGAGTTAGGTGTAGAAGGCGGTCGCCAGAGTGGGCTGTCGGACATGGTATAAAATGTCGGTGACATATGAAGTTGGCCTCCCAAACAATGAGTTGAGTTCATATTTCAACTCAACTCATCTCATCTCATCTCCTCACCCCAAACACCTCCTAAATGGCCTAAATATTTTAGACTTGATATATTAGCTTTTACTTGGTTCTGGCTACTACACTCGATCAATACTGTGAGTTGTTTGTTTTAATTTTCATTTGGATTGTTCTTGCATTGTTATCGATTCTTTTTGGGTCCCACCTAAATTAGGCACCATTGGTTTATTACACCTCAAATGTTCAGCACTTCTCTTATTTTTGTTCCTTTTCTGTACAAAGTTGCATATTAATTTTCAAATGTTTCCTATACTCTGCCTTGTACTTGACAATATATGTTGACATGAAATTCTCTTAATGGACCTGATATTCTGCTGGCTTCTATCACAGGCTCAGAAACCATTATGTTGGAATTATTGCATTACAAATGTCTAAAAGATCGTGAGATGATAAAGTGAGTTTTGTGTAAGGATAGATTTTTCTTTTCCTTTATTTTCTTTATCTTTTTTAACCAAAAAAGAAAAAATTGGGATGGGGCATAACCTTGTAATTCCCATATTATAATGACTCATTTTGTAAGGAGTGCTTGAAGGATACGGGTTCAGGTTTTGTAAACTTGATGTCATATAGCAAGTTTAATGGTGAAAGGGTTTTGACTATAGCCTCAAATATTATTCTTTTATTTAAAGATGTTTGGAATTTGTAACGCACCTAAACGTTTTTTTGTGTTAAACTAAATGTATTTCCAACCTCAAAATATGTAGTCTGCTCAAACATAACTCAACTGGTTAAAGTATATGTCCTCAGTTGAGAGATAAGAGTAGACACTTTTGATTCTTGAGATTTGAAAAAAGATTTTGAACGGTTCTTAAGTTAAAGTTGATACGATCATTTTTAAACGATATGACTACATTTATTATTATTATTATTTCATTTGATTTGGCCTTATTTGTCCACTTTCTCTCGTCTTATGGTGTTTCTTCTCCTATCCCTCTACTTACTCTACTTTCTCTCTTCTTCCTCCCTATTCTACCTCTGTAGAGCTGCCTTTGCCATTGCCATTGCCGTTGCCCTTTCTTCTCTTGCTGCCATTCATTTACTTCTTTCCATGGAATAAACAACGTTGATCTGGAGGGACAAACTTCAAATGAATGGTTTGTTCCTTTAGATTTGGAGTGTTGCTCGTTTTTAGACTAAGCATTGTTTCTTGTACCAAATGTAGATGGGGCAGGTATGCAAAGAGACCACAGACGGACGAAAGCATTAGTAAGTAAAGACAATAGGAAAATGGCAACAAGTGGAAGTGATCTGTCGGAGAAGAAGGGATAAAAGAAAAGGGACCAGATATTTTTGAAAGAGAATTGAAATGAAAAATAAAATAAATTAAACCCACGCATGTCCAAATTAATAGAAGTTGATTGTCACCTCAATTATGACATAAGTCAATTTTAATTTAGAAACTATTAACATTGGTATAAACTTTAAATGTCCAGATCAAATAAGGACTTCCTATACTGTACTAACAGCGACATTAACTTTAAATTTTATGGACTAAATGAAACAATTATTTGTTAAACAAATTTGTTTTCTAAATTTATATTTATATGTTTAGTTGATATGGTTTCAACATTTTCATTCTATATTTCATGGATACTTTTACAACATAAAAATATCAACTAGCTATTCTTGAAAGAAAAAACAAACTAAGTAAATGGCTAAATGCTTATAAGTATGTGTAAATGTTTATAGATTCACGGATATTTTAAAATCTCTCCAATAGAGACTTTTTAAATGCTTAAAATATTAATTGAAATTTAATCAAAACATGCTCTTAACCTGTCAATTTTAAAACATGTAATTTCTTTTTAGGCTAAAAATATGTTTCTCCCTAAGTTTGTATTTTCTTTTCAATTTAGTCACCAGAATTTAAAATTTTCAATGTAGTATTTTATATCCACACTATTTCTTTTACGCCTATGTTATTCAATTTAATCCCCACCACCAGTGTACATTGATTGATGATAAGGTTACATAACATAATAATTAGTAAATTGGTAGAAAATTAAAGAAGAAAAAGTCCGTTATTTGAAGAAAACTCTAAACTTCTACCAAATTTTTGAAAATTTTAAAGGAGGACGCAGAAATGGTGTCAAACAAATTCGAAAAAGAGTAGATTATATGACACAATTGGCAATGTGAAGCTGCCATTGCTATGAAAGATAGCGGATATTATCGCTTCAATTAAGGAGACTAATAAGACGTTTCGTATAAAGCATTTGTAGAGGAGATCATTCTCACACTCACAAATTCATCCATGAAAATTGAAAAAGCTATGAGATGTCTCATCACTCAAATATGAATATTAAACAGAAATCATAGATAAGTACTGTAACAACTAATGAAATTGACAGTAAGCAAAAGGTAATAACACACAAGAGTTGGTAACCCAGTTCGATGATGAACCAACTACGTCTGAGGGTAGTGTGCCTGTTGAAGAAGAAATTTTGGACCAATCACAAATTGACATGTCATTTCTCAAATTAATGACAAAATTACAAATAATTGAATTTGGGACCAATTAAAAGTTGACATGTGCCCCAAATTGAAATTGAAATTGAAGACATAAATTGGCAAATCTCGATGACGCCATGCGCTTTCGTCTTGACCGTTGGACTAAATAACATAATTTGGTCCAATTTGGTACTAATACTTGGGCTAAAATCCAACTGAGTCCTAAAACAGGCTTAATTTGGCCCAAGGGCCAAGGAAGGCCTGAAGTCCAATTTGTTGGGTCCAAGGGCCAAGCCCAAGCCCACAAAACCCACCTAAGAACTCATAAATAGGAGAGTTCTCTTCATTTGTGGGGGTCAGAAAATTCTACACTCCAGAGAATCTAGAGAGAATTCTTCCTACAATCAGAAGACTCTAACTCGAAGACTAAAGCTCTTTGAAGCATAGACATTCTTCTAAGACTCCAACTTCAAGAACATCCACGCGTTCCGCTTCCATACAACAAGCATACACATTCAACTAAGAGAGAATCAGAGGATCAAGTACTAGAGATCGAACCACATTCGCATCAAATCTACATCAACTTAAGTTCAACTCCACTAAACAAGTTTCTTAGGAAACCTCGTACGAACAAATTGGCACGCTTAGTGGGACGTCTCTACTCTCATCTTTCTCTCAACAATCAAATCAAGCAATGACCTCCAAGAAAGCTACGTCCAAAACCCCTGTTGCAAGCGACACCTACACAGGACCCATCACTCGTAGTCTCTCAAAGGGGGTCATGCGAGAGAAGGAACAAGGTTCTGCCATCACGGAGAATATTTGGAGGCGATTGATAGAATCTTCTAAAGGGGGGATCGTCATTAAAGAAAATCCTTTGTTTGACAGCTCCGCTCCTACTCCTGACTGA

mRNA sequence

ATGAGCAGAAATTTGAGTTGCAGATCGTCTGATTTCGTGTTGTTTTCGGCTTCGCTTTCCCTACTTTTCGTCTCCGCCCTTTCTGATGATTCCAGTAACAAAGCTAGTATTAAATCTGGGAATCATCCATCCTCCAGCAGCAACACTGGCTCGATGGTTGCCATCATCCTCTTTGGGATTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAATCACTGAAGTTTGGCTCAGAAACCATTATGTTGGAATTATTGCATTACAAATGTCTAAAAGATCGTGAGATGATAAAATGGGGCAGGTATGCAAAGAGACCACAGACGGACGAAAGCATTAGTAATGGGACGTCTCTACTCTCATCTTTCTCTCAACAATCAAATCAAGCAATGACCTCCAAGAAAGCTACGTCCAAAACCCCTGTTGCAAGCGACACCTACACAGGACCCATCACTCGTAGTCTCTCAAAGGGGGTCATGCGAGAGAAGGAACAAGGTTCTGCCATCACGGAGAATATTTGGAGGCGATTGATAGAATCTTCTAAAGGGGGGATCGTCATTAAAGAAAATCCTTTGTTTGACAGCTCCGCTCCTACTCCTGACTGA

Coding sequence (CDS)

ATGAGCAGAAATTTGAGTTGCAGATCGTCTGATTTCGTGTTGTTTTCGGCTTCGCTTTCCCTACTTTTCGTCTCCGCCCTTTCTGATGATTCCAGTAACAAAGCTAGTATTAAATCTGGGAATCATCCATCCTCCAGCAGCAACACTGGCTCGATGGTTGCCATCATCCTCTTTGGGATTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAATCACTGAAGTTTGGCTCAGAAACCATTATGTTGGAATTATTGCATTACAAATGTCTAAAAGATCGTGAGATGATAAAATGGGGCAGGTATGCAAAGAGACCACAGACGGACGAAAGCATTAGTAATGGGACGTCTCTACTCTCATCTTTCTCTCAACAATCAAATCAAGCAATGACCTCCAAGAAAGCTACGTCCAAAACCCCTGTTGCAAGCGACACCTACACAGGACCCATCACTCGTAGTCTCTCAAAGGGGGTCATGCGAGAGAAGGAACAAGGTTCTGCCATCACGGAGAATATTTGGAGGCGATTGATAGAATCTTCTAAAGGGGGGATCGTCATTAAAGAAAATCCTTTGTTTGACAGCTCCGCTCCTACTCCTGACTGA

Protein sequence

MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGILVVVLLSFFLFKSLKFGSETIMLELLHYKCLKDREMIKWGRYAKRPQTDESISNGTSLLSSFSQQSNQAMTSKKATSKTPVASDTYTGPITRSLSKGVMREKEQGSAITENIWRRLIESSKGGIVIKENPLFDSSAPTPD

Homology

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BLAST of ClCG10G007200 vs. NCBI nr
Match: XP_016901207.1 (PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-18
Identity = 62/72 (86.11%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGI 60
          MSRNLS R SDF+ FSASLSLLFVSALSDDSS K SI SGNHPSS SNTGSMVAIIL GI
Sbjct: 1  MSRNLSPRPSDFLSFSASLSLLFVSALSDDSSKKDSINSGNHPSSRSNTGSMVAIILLGI 60

Query: 61 LVVVLLSFFLFK 73
          LV VLLSFFLFK
Sbjct: 61 LVAVLLSFFLFK 72

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BLAST of ClCG10G007200 vs. NCBI nr
Match: KAE8650189.1 (hypothetical protein Csa_011006, partial [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-16
Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 1   MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGI 60
           MSRN S R SDF+ FSASLSLLFVSALSDDSS K S  SGNHPSS S+TGSMVAIIL GI
Sbjct: 90  MSRNSSPRPSDFLSFSASLSLLFVSALSDDSSKKDSTHSGNHPSSRSSTGSMVAIILLGI 149

Query: 61  LVVVLLSFFLFK 73
           LVVVLLSFFLFK
Sbjct: 150 LVVVLLSFFLFK 161

[Close]

BLAST of ClCG10G007200 vs. NCBI nr
Match: KAG7015450.1 (hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-15
Identity = 59/72 (81.94%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 1   MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGI 60
           MSRNLS RSSD V  SASLSLLFVSALS+DSS K SI SG H SSSS TGSMVAIIL G 
Sbjct: 32  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 91

Query: 61  LVVVLLSFFLFK 73
           LVVVLLSFFLFK
Sbjct: 92  LVVVLLSFFLFK 103

[Close]

BLAST of ClCG10G007200 vs. NCBI nr
Match: XP_022929545.1 (uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022929546.1 uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022929547.1 uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022984816.1 uncharacterized protein LOC111482987 [Cucurbita maxima] >XP_023551749.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo] >XP_023551750.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo] >XP_023551751.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo] >XP_023551752.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-15
Identity = 59/72 (81.94%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 1  MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGI 60
          MSRNLS RSSD V  SASLSLLFVSALS+DSS K SI SG H SSSS TGSMVAIIL G 
Sbjct: 1  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 60

Query: 61 LVVVLLSFFLFK 73
          LVVVLLSFFLFK
Sbjct: 61 LVVVLLSFFLFK 72

[Close]

BLAST of ClCG10G007200 vs. NCBI nr
Match: KAG7031355.1 (hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-15
Identity = 58/72 (80.56%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 1  MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGI 60
          MS NLS RSSDF+ FSA LSLLFVSALSDDS+ K SIKSGNHPSS SNT SM+AIIL G+
Sbjct: 1  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGL 60

Query: 61 LVVVLLSFFLFK 73
          LVVV LSFFLFK
Sbjct: 61 LVVV-LSFFLFK 71

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BLAST of ClCG10G007200 vs. ExPASy TrEMBL
Match: A0A1S4DZ07 (uncharacterized protein LOC103493315 OS=Cucumis melo OX=3656 GN=LOC103493315 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.2e-18
Identity = 62/72 (86.11%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGI 60
          MSRNLS R SDF+ FSASLSLLFVSALSDDSS K SI SGNHPSS SNTGSMVAIIL GI
Sbjct: 1  MSRNLSPRPSDFLSFSASLSLLFVSALSDDSSKKDSINSGNHPSSRSNTGSMVAIILLGI 60

Query: 61 LVVVLLSFFLFK 73
          LV VLLSFFLFK
Sbjct: 61 LVAVLLSFFLFK 72

[Close]

BLAST of ClCG10G007200 vs. ExPASy TrEMBL
Match: A0A0A0L5F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110610 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.0e-17
Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 1   MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGI 60
           MSRN S R SDF+ FSASLSLLFVSALSDDSS K S  SGNHPSS S+TGSMVAIIL GI
Sbjct: 69  MSRNSSPRPSDFLSFSASLSLLFVSALSDDSSKKDSTHSGNHPSSRSSTGSMVAIILLGI 128

Query: 61  LVVVLLSFFLFK 73
           LVVVLLSFFLFK
Sbjct: 129 LVVVLLSFFLFK 140

[Close]

BLAST of ClCG10G007200 vs. ExPASy TrEMBL
Match: A0A6J1EUP1 (uncharacterized protein LOC111436082 OS=Cucurbita moschata OX=3662 GN=LOC111436082 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15
Identity = 59/72 (81.94%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 1  MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGI 60
          MSRNLS RSSD V  SASLSLLFVSALS+DSS K SI SG H SSSS TGSMVAIIL G 
Sbjct: 1  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 60

Query: 61 LVVVLLSFFLFK 73
          LVVVLLSFFLFK
Sbjct: 61 LVVVLLSFFLFK 72

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BLAST of ClCG10G007200 vs. ExPASy TrEMBL
Match: A0A6J1J6C2 (uncharacterized protein LOC111482987 OS=Cucurbita maxima OX=3661 GN=LOC111482987 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15
Identity = 59/72 (81.94%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 1  MSRNLSCRSSDFVLFSASLSLLFVSALSDDSSNKASIKSGNHPSSSSNTGSMVAIILFGI 60
          MSRNLS RSSD V  SASLSLLFVSALS+DSS K SI SG H SSSS TGSMVAIIL G 
Sbjct: 1  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 60

Query: 61 LVVVLLSFFLFK 73
          LVVVLLSFFLFK
Sbjct: 61 LVVVLLSFFLFK 72

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BLAST of ClCG10G007200 vs. ExPASy TrEMBL
Match: A0A5D3BSE1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00240 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-13
Identity = 42/66 (63.64%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 130 MTSKKATSKTPVASDTYTGPITRSLSKGVMREKEQGSAITENIWRRLIESSKGGIVIKEN 189
           M SKKATSK+ VASD YTGPIT SLSKG+ +E++QGS+I ++I ++L+ES K GIV+KEN
Sbjct: 1   MASKKATSKSSVASDAYTGPITHSLSKGITQEQDQGSSIAQSILKQLMESHKAGIVLKEN 60

Query: 190 PLFDSS 196
            L+D+S
Sbjct: 61  SLYDNS 66

The following BLAST results are available for this feature:

BLAST of ClCG10G007200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901207.1	4.5e-18	86.11	PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo]	[more]
KAE8650189.1	1.4e-16	83.33	hypothetical protein Csa_011006, partial [Cucumis sativus]	[more]
KAG7015450.1	2.1e-15	81.94	hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022929545.1	2.1e-15	81.94	uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022929546.1 unchar...	[more]
KAG7031355.1	2.7e-15	80.56	hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of ClCG10G007200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG10G007200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZ07	2.2e-18	86.11	uncharacterized protein LOC103493315 OS=Cucumis melo OX=3656 GN=LOC103493315 PE=...	[more]
A0A0A0L5F0	7.0e-17	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110610 PE=4 SV=1	[more]
A0A6J1EUP1	1.0e-15	81.94	uncharacterized protein LOC111436082 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1J6C2	1.0e-15	81.94	uncharacterized protein LOC111482987 OS=Cucurbita maxima OX=3661 GN=LOC111482987...	[more]
A0A5D3BSE1	2.1e-13	63.64	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of ClCG10G007200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..148
None	No IPR available	PANTHER	PTHR33780	EXPRESSED PROTEIN	coord: 2..72
None	No IPR available	PANTHER	PTHR33780:SF10	TRANSMEMBRANE PROTEIN	coord: 2..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G007200.2	ClCG10G007200.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane