ClCG10G005360 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTGTTTGGTCGTCGATCAATTTTTTGTTACGATTTGTTGATTACTTTTTTCTGTTGCCATTCTCTCGTTTTGCCGAAATCTCGATGGATTTTGTAGGGTTTAGTTTGTGTTTCAGCTGAGTAGTTATTAAAATTTTGAAATAGGGCCTTTCTATGCGATTAGGTTTAAGCTTGGTGAGGGAATGTCGATTGGTGTTCTTCCCCTTTCTAAGTAAGAAAATTTGCGATCATCGGAAAATTATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTTCTTAGTTTCATTTAAGTATTTATGCAGCCTTTTTCTTTTATATATATATATGTATTTTGAAACTTACAATAGTGAGTTTTTTCCTTTCTCGCATCTTTTTTTAAGCGATAAAATGTGAGAATTTTTATCAAGGAGTTTTTTTTTTAAAAATTTTCTTCTTGCATCTTCTGGTTGCAAGAAAAATTATGACACTTTAACTTTTAATATGTTGGAATTTTTCTATCATCTAATTTTGTAAGTGCTTGAATTTCTATTGTTTGATAGATCATACCCACACCACAAAAAACAAAAGATGTAAATTCAAAAACCCACACTCATACTCATTGTTATAAATATATGTTCACTTATGAAAAAGTAAGCACATTTGTAAGATTGAAAATTGGATTTTTTAAAATTTTTTCACACTTTCTCAATACGGGAAGTTGTGAGAAAATTTTCAACACTGTCTAATCAACAAAACACAAAATTGCGAGAAGATTTAGAGAAACTCAAAATTTAAGGTGCTCGAATTTTACTCGCAACGAGAAAGTGCGAAAAAATTACGTGAACTCACTCAAATTAACTTTATGTAATATAATAATGAACTCACTCAATACAATAAATATATTTTTCCTTAAGTTAACACATTAATTTTAACATTTCAAATTTTCTTTCAATATCGTTGATCTTTGTTGGTTCATTGTGATCTAGGAAGGGACATTATGGACATACATGTTATAAGCTCTAATGATCCAAGATGAATTAAATAAGCTCATTAATTAATAATTCAAATAATTAGTTATATTAATATAAGATATTAAAATGAATAATAACAATTAATTAGGTTTAATCTATTTAGGTCCTATATAAAAGGAGAGTCTTCATATTATTCACTATGATCGTACAAAGAGCCATTCTCGAGATTTTTTTCTTCGTTTCCTTCAATTCTTTCAAGGAGGCTCCCACAAGCTAGATTCTTACCAGAGTATATAACAAGGAAGATCTCATGTGGTAAATTCAGAAGGAGGAATTTCAATGAGATATTGATGCTTAACCCTTTAATTATTGATTTATGTGTTATAATTCTAAAACGAAATCAAAATATGCTATTCAATTGCTTAGGCCATGGGATCGAAGGATTTGGTCCCATTAAATATGTGCAATATTGGCGGTGACGTAATTTGCTTGATCCTCGAGTTTGAATAGTGCAAATATGGAGCTCAACTCAATCATTTTTTCTTTGGTGAAACTCCACGAGCTACACTAGTTGACCTAGAACTCTAAGGTTTTGAGTTTTCCTTTGATGACGTGTGAACCATTATGCAGACTTCTGATCTTTGTTGTACTCGGGTCTTGCCTTATATAACCCCAACAAACAAGACTTTAAGTGATCTAAAAATATTTATGAAGGTCAAAGTTGGAAAAGAATTAAAATAATATTGAAACAAAAAAAAAGCTTAGGAAAAATGAAGTTGTAGGATATATAGTTTAGCCAAATGCTATTACCAAACAATAGTGAGCGAGCGGCTGAGTGTGAGTGTGAAGAGTGAGAAGGACAGCAAGGCCGAGACGATCAGAGAGAAGAGAGATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTGTTTGGTCGTCGATCAATTTTTTGTTACGATTTGTTGATTACTTTTTTCTGTTGCCATTCTCTCGTTTTGCCGAAATCTCGATGGATTTTGTAGGGTTTAGTTTGTGTTTCAGCTGAGTAGTTATTAAAATTTTGAAATAGGGCCTTTCTATGCGATTAGGTTTAAGCTTGGTGAGGGAATGTCGATTGGTGTTCTTCCCCTTTCTAAGTAAGAAAATTTGCGATCATCGGAAAATTATAGTAGTTTGTTCGAAATGCAGAGATAATTTTGAGTTCTTTTCATCTTGAATTTAGAAACCTACTTATCATCAAGTATTGAAGATGTTATAGAATGGTATATTTCTCATAAAAGCTCCAGGGTGTTTGATGAGCGTGAATAATTAGTGAGGAACAAACTTAAGCACTGATATTTTAAATCTACAAAAATAATTGAAATGAAGATTTTTACGCGAAATTTAAAACTTGAATTTTATTACACAGCTTAAACAACTTATGAAAAAATGGGAGAGCTTTTTTCTTCTATAGTCTAGTTGGAGCGGAGCAAATAGTTCGTCTTTGAAGGCTCCTTTTTAGATATTGTAGAAGATAACTCTTCCTTGGGGGAACAATCGAATAGTTATTCTTTCCTAATTGTTTCTGTTGAATGTTTATAACTGATGCATAACCACTCGGTCCACCCCTTAATATCAACTTCTTGTGTAGCAGGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGGTAGCTTCATCACTTTGTTATTGTTACTTTTTATTTGATTGTGCTTATGAGTAGATTAAGTGGGTTTTTGGATGCTGACCTGAGTATTGCTTGAAAGTTTGAATATTTTTCAATATTTGTAATGAATATTGAAAAAAGAAACATAAGGTTGAAGTGGTTTTCTGTGTGTGCGCACTTACGCATTATTAAGCTGCCTAATGGAATGTGCATTTTCATGTTCTATAATGTAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTATGTCCATTGATTATGGTGCCTGCTCGTATCATGTCCATGCAGATTAAACGTTTGAGCTGAATATAAAAAATTCTAAGTCAATGAAATTTACAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTATGAAATTCTGTCCTTTTTTCTTGATGTCCATAATATCTTTGCTCTGTTAATATCTAAAGAACTAGGGAGCTGTTTAGTAGTTGTTTAAAAAAATGGTTTTATGCTTTTGTCTACCCAACCATCACTACTTACAAGTTATTCTGATGTAAAGGTATGTTTACTCTGTTTATCCAACTTTTCTGTCTTACCCTTCCAACATTGTAATAAAGATAATCTGTCTTTGTTATTAATTTTGTATAATTTATTCAACAGAAACTTGACAATGTTTGTCTTTTGCCTATTTACTTGATGAGTAGATGTCCACGTGAACTACAATTTGAAGTTAAATCAAGATGTAGTAAGTCATATGTTGGTGTTCAAAATGGATGAAGACTTTCGTTAAATATAATTGAAAACTAATGTGGGTACTAGAACATTTGAAGTTCGGATACTTAAAAAAAAAAAGAGTATGGAAATTTATGGACAAAAATAGAATTTAAACCTATTGCAAGAAATTGCCGTATGTTATCGGAGGACTACTTATAGATGATGTTTTCTTGACATTGTTTTCAACAAATAATTATTCTAAAAGTATTGAAAGCGACTCTCAGAACACTCCCATGTTTTTGTTGTGATTCAGTTTTTTCTTCACAATTTGTCTTGCAGGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATGTAAGTTTCGTTAAACTGAACCTCTACTCTCTCTATTATCAAATGCCGAGCATTTAGCTTTGATATCTGTATGATCTCTCTGTCTCCGTTACAGTTCAACTTTAGTATCTATAGTTTATTTGATTGAATTTTGAAACTTCACCGAAAAGTTGAACTTTTTGTTGTAACAATTTGTAACAATTTATATCATGTTTGGGAGTGATTTTAAAATCGTTAAAATCACTTTTGTCATTTTTAAAATCACACGAAAACACATTTTTAATCACTCAAAATTAAATTAATTTTCAATTTTACACTTTTATACAATTTTCATATTGTCAAAATTAGTTTTGAAGGATTAAAGTGATTTTAGTCATTTTAAAATCTGTTAATAGTTTTCATTTACTGAAGGATAACTGAAGTAATGGTGAATTTATGATTCTATCTACGTTGCTTTGATATATTCTCTTGAGATGAGGATGTATTCTTCAAGCTCAAGTTCAGATGGTTTTCACTTTGTTGCAGATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGAACTCTTACCGAATTTCAGGTACCTTAGTTTTCAAGACAGCATAAATTAACAAGATGGAGATATCAATCATAGGAACACCCTAAATCCATTTTGGCTTTTGTATTCCCTGAGGCTTTCATCTTACAGTATATTGTAAGCACTTGACATCAGAATCAAAGTTATAAAGGCCTTTTTCCCATTGAAAGTCAAAGTCAGATGAACCATAATGATTGTTGCAG ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTAGTGAGAAGGACAGCAAGGCCGAGACGATCAGAGAGAAGAGAGATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGAACTCTTACCGAATTTCAGGTACCTTAGTTTTCAAGACAGCATAAATTAACAAGATGGAGATATCAATCATAGGAACACCCTAAATCCATTTTGGCTTTTGTATTCCCTGAGGCTTTCATCTTACAGTATATTGTAAGCACTTGACATCAGAATCAAAGTTATAAAGGCCTTTTTCCCATTGAAAGTCAAAGTCAGATGAACCATAATGATTGTTGCAG ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTAGTGAGAAGGACAGCAAGGCCGAGACGATCAGAGAGAAGAGAGATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGA MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTNTSTLSLFCLFLRFLVRRTARPRRSERREMAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTNTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIECIATL Homology
BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_038903207.1 (reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 353.2 bits (905), Expect = 2.0e-93 Identity = 179/187 (95.72%), Postives = 183/187 (97.86%), Query Frame = 0
BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_008463412.1 (PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo]) HSP 1 Score: 352.4 bits (903), Expect = 3.4e-93 Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0
BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_004152932.1 (reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus] >KGN56123.1 hypothetical protein Csa_009669 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 2.9e-92 Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0
BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_022976324.1 (reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima]) HSP 1 Score: 339.3 bits (869), Expect = 3.0e-89 Identity = 173/187 (92.51%), Postives = 178/187 (95.19%), Query Frame = 0
BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_022942433.1 (reactive Intermediate Deaminase A, chloroplastic [Cucurbita moschata] >XP_023545861.1 reactive Intermediate Deaminase A, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6600781.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 335.1 bits (858), Expect = 5.7e-88 Identity = 171/187 (91.44%), Postives = 176/187 (94.12%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 7.5e-67 Identity = 139/190 (73.16%), Postives = 156/190 (82.11%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32 Identity = 63/123 (51.22%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: P52760 (2-iminobutanoate/2-iminopropanoate deaminase OS=Mus musculus OX=10090 GN=Rida PE=1 SV=3) HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32 Identity = 65/123 (52.85%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3) HSP 1 Score: 139.4 bits (350), Expect = 6.0e-32 Identity = 65/122 (53.28%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: P52759 (2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Rida PE=1 SV=3) HSP 1 Score: 136.3 bits (342), Expect = 5.1e-31 Identity = 63/123 (51.22%), Postives = 90/123 (73.17%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A1S3CJ54 (reactive Intermediate Deaminase A, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103501583 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.7e-93 Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A0A0L2Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077580 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.4e-92 Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A6J1IN69 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476753 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.5e-89 Identity = 173/187 (92.51%), Postives = 178/187 (95.19%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A6J1FUT7 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447476 PE=3 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 2.7e-88 Identity = 171/187 (91.44%), Postives = 176/187 (94.12%), Query Frame = 0
BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A6P4APP4 (reactive Intermediate Deaminase A, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107431842 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 2.1e-80 Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0
BLAST of ClCG10G005360 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein ) HSP 1 Score: 255.4 bits (651), Expect = 5.3e-68 Identity = 139/190 (73.16%), Postives = 156/190 (82.11%), Query Frame = 0
BLAST of ClCG10G005360 vs. TAIR 10
Match: AT3G04480.1 (endoribonucleases ) HSP 1 Score: 42.4 bits (98), Expect = 7.1e-04 Identity = 27/100 (27.00%), Postives = 51/100 (51.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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