ClCG10G005360 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG10G005360
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionreactive Intermediate Deaminase A, chloroplastic-like
LocationCG_Chr10: 6641216 .. 6646331 (-)
RNA-Seq ExpressionClCG10G005360
SyntenyClCG10G005360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTGTTTGGTCGTCGATCAATTTTTTGTTACGATTTGTTGATTACTTTTTTCTGTTGCCATTCTCTCGTTTTGCCGAAATCTCGATGGATTTTGTAGGGTTTAGTTTGTGTTTCAGCTGAGTAGTTATTAAAATTTTGAAATAGGGCCTTTCTATGCGATTAGGTTTAAGCTTGGTGAGGGAATGTCGATTGGTGTTCTTCCCCTTTCTAAGTAAGAAAATTTGCGATCATCGGAAAATTATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTTCTTAGTTTCATTTAAGTATTTATGCAGCCTTTTTCTTTTATATATATATATGTATTTTGAAACTTACAATAGTGAGTTTTTTCCTTTCTCGCATCTTTTTTTAAGCGATAAAATGTGAGAATTTTTATCAAGGAGTTTTTTTTTTAAAAATTTTCTTCTTGCATCTTCTGGTTGCAAGAAAAATTATGACACTTTAACTTTTAATATGTTGGAATTTTTCTATCATCTAATTTTGTAAGTGCTTGAATTTCTATTGTTTGATAGATCATACCCACACCACAAAAAACAAAAGATGTAAATTCAAAAACCCACACTCATACTCATTGTTATAAATATATGTTCACTTATGAAAAAGTAAGCACATTTGTAAGATTGAAAATTGGATTTTTTAAAATTTTTTCACACTTTCTCAATACGGGAAGTTGTGAGAAAATTTTCAACACTGTCTAATCAACAAAACACAAAATTGCGAGAAGATTTAGAGAAACTCAAAATTTAAGGTGCTCGAATTTTACTCGCAACGAGAAAGTGCGAAAAAATTACGTGAACTCACTCAAATTAACTTTATGTAATATAATAATGAACTCACTCAATACAATAAATATATTTTTCCTTAAGTTAACACATTAATTTTAACATTTCAAATTTTCTTTCAATATCGTTGATCTTTGTTGGTTCATTGTGATCTAGGAAGGGACATTATGGACATACATGTTATAAGCTCTAATGATCCAAGATGAATTAAATAAGCTCATTAATTAATAATTCAAATAATTAGTTATATTAATATAAGATATTAAAATGAATAATAACAATTAATTAGGTTTAATCTATTTAGGTCCTATATAAAAGGAGAGTCTTCATATTATTCACTATGATCGTACAAAGAGCCATTCTCGAGATTTTTTTCTTCGTTTCCTTCAATTCTTTCAAGGAGGCTCCCACAAGCTAGATTCTTACCAGAGTATATAACAAGGAAGATCTCATGTGGTAAATTCAGAAGGAGGAATTTCAATGAGATATTGATGCTTAACCCTTTAATTATTGATTTATGTGTTATAATTCTAAAACGAAATCAAAATATGCTATTCAATTGCTTAGGCCATGGGATCGAAGGATTTGGTCCCATTAAATATGTGCAATATTGGCGGTGACGTAATTTGCTTGATCCTCGAGTTTGAATAGTGCAAATATGGAGCTCAACTCAATCATTTTTTCTTTGGTGAAACTCCACGAGCTACACTAGTTGACCTAGAACTCTAAGGTTTTGAGTTTTCCTTTGATGACGTGTGAACCATTATGCAGACTTCTGATCTTTGTTGTACTCGGGTCTTGCCTTATATAACCCCAACAAACAAGACTTTAAGTGATCTAAAAATATTTATGAAGGTCAAAGTTGGAAAAGAATTAAAATAATATTGAAACAAAAAAAAAGCTTAGGAAAAATGAAGTTGTAGGATATATAGTTTAGCCAAATGCTATTACCAAACAATAGTGAGCGAGCGGCTGAGTGTGAGTGTGAAGAGTGAGAAGGACAGCAAGGCCGAGACGATCAGAGAGAAGAGAGATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTGTTTGGTCGTCGATCAATTTTTTGTTACGATTTGTTGATTACTTTTTTCTGTTGCCATTCTCTCGTTTTGCCGAAATCTCGATGGATTTTGTAGGGTTTAGTTTGTGTTTCAGCTGAGTAGTTATTAAAATTTTGAAATAGGGCCTTTCTATGCGATTAGGTTTAAGCTTGGTGAGGGAATGTCGATTGGTGTTCTTCCCCTTTCTAAGTAAGAAAATTTGCGATCATCGGAAAATTATAGTAGTTTGTTCGAAATGCAGAGATAATTTTGAGTTCTTTTCATCTTGAATTTAGAAACCTACTTATCATCAAGTATTGAAGATGTTATAGAATGGTATATTTCTCATAAAAGCTCCAGGGTGTTTGATGAGCGTGAATAATTAGTGAGGAACAAACTTAAGCACTGATATTTTAAATCTACAAAAATAATTGAAATGAAGATTTTTACGCGAAATTTAAAACTTGAATTTTATTACACAGCTTAAACAACTTATGAAAAAATGGGAGAGCTTTTTTCTTCTATAGTCTAGTTGGAGCGGAGCAAATAGTTCGTCTTTGAAGGCTCCTTTTTAGATATTGTAGAAGATAACTCTTCCTTGGGGGAACAATCGAATAGTTATTCTTTCCTAATTGTTTCTGTTGAATGTTTATAACTGATGCATAACCACTCGGTCCACCCCTTAATATCAACTTCTTGTGTAGCAGGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGGTAGCTTCATCACTTTGTTATTGTTACTTTTTATTTGATTGTGCTTATGAGTAGATTAAGTGGGTTTTTGGATGCTGACCTGAGTATTGCTTGAAAGTTTGAATATTTTTCAATATTTGTAATGAATATTGAAAAAAGAAACATAAGGTTGAAGTGGTTTTCTGTGTGTGCGCACTTACGCATTATTAAGCTGCCTAATGGAATGTGCATTTTCATGTTCTATAATGTAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTATGTCCATTGATTATGGTGCCTGCTCGTATCATGTCCATGCAGATTAAACGTTTGAGCTGAATATAAAAAATTCTAAGTCAATGAAATTTACAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTATGAAATTCTGTCCTTTTTTCTTGATGTCCATAATATCTTTGCTCTGTTAATATCTAAAGAACTAGGGAGCTGTTTAGTAGTTGTTTAAAAAAATGGTTTTATGCTTTTGTCTACCCAACCATCACTACTTACAAGTTATTCTGATGTAAAGGTATGTTTACTCTGTTTATCCAACTTTTCTGTCTTACCCTTCCAACATTGTAATAAAGATAATCTGTCTTTGTTATTAATTTTGTATAATTTATTCAACAGAAACTTGACAATGTTTGTCTTTTGCCTATTTACTTGATGAGTAGATGTCCACGTGAACTACAATTTGAAGTTAAATCAAGATGTAGTAAGTCATATGTTGGTGTTCAAAATGGATGAAGACTTTCGTTAAATATAATTGAAAACTAATGTGGGTACTAGAACATTTGAAGTTCGGATACTTAAAAAAAAAAAGAGTATGGAAATTTATGGACAAAAATAGAATTTAAACCTATTGCAAGAAATTGCCGTATGTTATCGGAGGACTACTTATAGATGATGTTTTCTTGACATTGTTTTCAACAAATAATTATTCTAAAAGTATTGAAAGCGACTCTCAGAACACTCCCATGTTTTTGTTGTGATTCAGTTTTTTCTTCACAATTTGTCTTGCAGGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATGTAAGTTTCGTTAAACTGAACCTCTACTCTCTCTATTATCAAATGCCGAGCATTTAGCTTTGATATCTGTATGATCTCTCTGTCTCCGTTACAGTTCAACTTTAGTATCTATAGTTTATTTGATTGAATTTTGAAACTTCACCGAAAAGTTGAACTTTTTGTTGTAACAATTTGTAACAATTTATATCATGTTTGGGAGTGATTTTAAAATCGTTAAAATCACTTTTGTCATTTTTAAAATCACACGAAAACACATTTTTAATCACTCAAAATTAAATTAATTTTCAATTTTACACTTTTATACAATTTTCATATTGTCAAAATTAGTTTTGAAGGATTAAAGTGATTTTAGTCATTTTAAAATCTGTTAATAGTTTTCATTTACTGAAGGATAACTGAAGTAATGGTGAATTTATGATTCTATCTACGTTGCTTTGATATATTCTCTTGAGATGAGGATGTATTCTTCAAGCTCAAGTTCAGATGGTTTTCACTTTGTTGCAGATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGAACTCTTACCGAATTTCAGGTACCTTAGTTTTCAAGACAGCATAAATTAACAAGATGGAGATATCAATCATAGGAACACCCTAAATCCATTTTGGCTTTTGTATTCCCTGAGGCTTTCATCTTACAGTATATTGTAAGCACTTGACATCAGAATCAAAGTTATAAAGGCCTTTTTCCCATTGAAAGTCAAAGTCAGATGAACCATAATGATTGTTGCAG

mRNA sequence

ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTAGTGAGAAGGACAGCAAGGCCGAGACGATCAGAGAGAAGAGAGATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGAACTCTTACCGAATTTCAGGTACCTTAGTTTTCAAGACAGCATAAATTAACAAGATGGAGATATCAATCATAGGAACACCCTAAATCCATTTTGGCTTTTGTATTCCCTGAGGCTTTCATCTTACAGTATATTGTAAGCACTTGACATCAGAATCAAAGTTATAAAGGCCTTTTTCCCATTGAAAGTCAAAGTCAGATGAACCATAATGATTGTTGCAG

Coding sequence (CDS)

ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTAGTGAGAAGGACAGCAAGGCCGAGACGATCAGAGAGAAGAGAGATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGA

Protein sequence

MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTNTSTLSLFCLFLRFLVRRTARPRRSERREMAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTNTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIECIATL
Homology
BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_038903207.1 (reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 2.0e-93
Identity = 179/187 (95.72%), Postives = 183/187 (97.86%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCAARTFHMPAFDVTALRSKTPL VGVGC SVAGTTLWRSSSTSK Q+PFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRSSSTSKRQMPFASLGISTD 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
           TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSG LGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGCLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+P+PARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPSPARSTYQVAALPLDAKVE 180

Query: 269 IECIATL 276
           IECIATL
Sbjct: 181 IECIATL 187

BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_008463412.1 (PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo])

HSP 1 Score: 352.4 bits (903), Expect = 3.4e-93
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCA R+FHMPAFDVTALRSKTPL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 269 IECIATL 276
           IECIATL
Sbjct: 181 IECIATL 187

BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_004152932.1 (reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus] >KGN56123.1 hypothetical protein Csa_009669 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.9e-92
Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCAARTFHMPAFDVTALRSK+PL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTY+VA LPLDAKVE
Sbjct: 121 GEILKAGGSSYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYEVARLPLDAKVE 180

Query: 269 IECIATL 276
           IECIATL
Sbjct: 181 IECIATL 187

BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_022976324.1 (reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima])

HSP 1 Score: 339.3 bits (869), Expect = 3.0e-89
Identity = 173/187 (92.51%), Postives = 178/187 (95.19%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCAAR  HMPA D+TALRSKTPL VGVGC SVAGTT  RSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTFCRSSSTSKRQIPFASLGISTD 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
           TSIKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  TSIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 269 IECIATL 276
           IECIATL
Sbjct: 181 IECIATL 187

BLAST of ClCG10G005360 vs. NCBI nr
Match: XP_022942433.1 (reactive Intermediate Deaminase A, chloroplastic [Cucurbita moschata] >XP_023545861.1 reactive Intermediate Deaminase A, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6600781.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.1 bits (858), Expect = 5.7e-88
Identity = 171/187 (91.44%), Postives = 176/187 (94.12%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCAAR  HMPA D+TALRSKTPL VGVGC SVAGTTL RSSSTSK QIPFASL IST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTLCRSSSTSKRQIPFASLSISTD 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
            SIKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  ASIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 269 IECIATL 276
           IECIATL
Sbjct: 181 IECIATL 187

BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 7.5e-67
Identity = 139/190 (73.16%), Postives = 156/190 (82.11%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDV-TALRS-KTPLV-VGVGCVSVAGTTLWRSSSTSKPQIPFASLGI 148
           M W   R+ + P  D+ TALRS +TPLV  GVGC + AG +L+R SS S    PFASL +
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSP---PFASLSV 60

Query: 149 STNTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVL 208
           S ++  KE V T+KAPAALGPYSQAIKANNL+F+SGVLGL PETGKFVS+ VEDQTEQVL
Sbjct: 61  SASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVL 120

Query: 209 KNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDA 268
           KNMGEILKA GA YSSVVKTTIMLADL DFK VNEIY KYFPAP+PARSTYQVAALPL+A
Sbjct: 121 KNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNA 180

Query: 269 KVEIECIATL 276
           K+EIECIATL
Sbjct: 181 KIEIECIATL 187

BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32
Identity = 63/123 (51.22%), Postives = 92/123 (74.80%), Query Frame = 0

Query: 151 IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 210
           I+  + T KAP A+GPYSQA+  +  +++SG +G++P +G+ VS  V ++ +Q LKNMGE
Sbjct: 5   IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGE 64

Query: 211 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIE 270
           ILKA G  +++VVKTT++LAD+ DF  VNEIY +YF +  PAR+ YQVAALP  +++EIE
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIE 124

Query: 271 CIA 274
            +A
Sbjct: 125 AVA 127

BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: P52760 (2-iminobutanoate/2-iminopropanoate deaminase OS=Mus musculus OX=10090 GN=Rida PE=1 SV=3)

HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32
Identity = 65/123 (52.85%), Postives = 92/123 (74.80%), Query Frame = 0

Query: 151 IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 210
           I++ + T KAPAA+GPYSQA++ +  +++SG +GL+P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGE 64

Query: 211 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIE 270
           ILKA G  +++VVKTT++LAD+ DF  VNEIY  YF    PAR+ YQVAALP  ++VEIE
Sbjct: 65  ILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVEIE 124

Query: 271 CIA 274
            IA
Sbjct: 125 AIA 127

BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 139.4 bits (350), Expect = 6.0e-32
Identity = 65/122 (53.28%), Postives = 92/122 (75.41%), Query Frame = 0

Query: 152 KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEI 211
           ++ + +  AP A+GPYSQA++A N +++SG LGL+P+TG  + + V +QT Q LKN+GE+
Sbjct: 41  RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGD-LKEGVVEQTHQSLKNLGEV 100

Query: 212 LKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIEC 271
           LKA GA Y +VVKTT++L ++ DF  VNE+YG+YF +P PAR+ YQVAALP    VEIE 
Sbjct: 101 LKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEA 160

Query: 272 IA 274
           +A
Sbjct: 161 VA 161

BLAST of ClCG10G005360 vs. ExPASy Swiss-Prot
Match: P52759 (2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Rida PE=1 SV=3)

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-31
Identity = 63/123 (51.22%), Postives = 90/123 (73.17%), Query Frame = 0

Query: 151 IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 210
           I++ + T KAPAA+G YSQA+  +  ++VSG +G++P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGE 64

Query: 211 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIE 270
           ILKA G  +++VVKTT++LAD+ DF  VNEIY  YF    PAR+ YQVAALP  +++EIE
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIE 124

Query: 271 CIA 274
            IA
Sbjct: 125 AIA 127

BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A1S3CJ54 (reactive Intermediate Deaminase A, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103501583 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.7e-93
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCA R+FHMPAFDVTALRSKTPL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 269 IECIATL 276
           IECIATL
Sbjct: 181 IECIATL 187

BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A0A0L2Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077580 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.4e-92
Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCAARTFHMPAFDVTALRSK+PL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTY+VA LPLDAKVE
Sbjct: 121 GEILKAGGSSYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYEVARLPLDAKVE 180

Query: 269 IECIATL 276
           IECIATL
Sbjct: 181 IECIATL 187

BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A6J1IN69 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476753 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.5e-89
Identity = 173/187 (92.51%), Postives = 178/187 (95.19%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCAAR  HMPA D+TALRSKTPL VGVGC SVAGTT  RSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTFCRSSSTSKRQIPFASLGISTD 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
           TSIKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  TSIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 269 IECIATL 276
           IECIATL
Sbjct: 181 IECIATL 187

BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A6J1FUT7 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447476 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.7e-88
Identity = 171/187 (91.44%), Postives = 176/187 (94.12%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCAAR  HMPA D+TALRSKTPL VGVGC SVAGTTL RSSSTSK QIPFASL IST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTLCRSSSTSKRQIPFASLSISTD 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
            SIKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  ASIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 269 IECIATL 276
           IECIATL
Sbjct: 181 IECIATL 187

BLAST of ClCG10G005360 vs. ExPASy TrEMBL
Match: A0A6P4APP4 (reactive Intermediate Deaminase A, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107431842 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.1e-80
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 148
           MAWCAARTF++PA DV ALR++ PL VGVG  SVAG+ +WRSSS+ K   PFA LGIST+
Sbjct: 1   MAWCAARTFNVPAIDVGALRTRAPLAVGVGFASVAGSNIWRSSSSMKRSAPFACLGISTD 60

Query: 149 TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 208
           T IKEAV+TDKAPAALGPYSQAIKANN L+VSGVLGL PETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  TRIKEAVKTDKAPAALGPYSQAIKANNFLYVSGVLGLIPETGKFVSDNVEDQTEQVLKNM 120

Query: 209 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 268
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTYQVAALPLDAK+E
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAKIE 180

Query: 269 IECIATL 276
           IECIA+L
Sbjct: 181 IECIASL 187

BLAST of ClCG10G005360 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein )

HSP 1 Score: 255.4 bits (651), Expect = 5.3e-68
Identity = 139/190 (73.16%), Postives = 156/190 (82.11%), Query Frame = 0

Query: 89  MAWCAARTFHMPAFDV-TALRS-KTPLV-VGVGCVSVAGTTLWRSSSTSKPQIPFASLGI 148
           M W   R+ + P  D+ TALRS +TPLV  GVGC + AG +L+R SS S    PFASL +
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSP---PFASLSV 60

Query: 149 STNTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVL 208
           S ++  KE V T+KAPAALGPYSQAIKANNL+F+SGVLGL PETGKFVS+ VEDQTEQVL
Sbjct: 61  SASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVL 120

Query: 209 KNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDA 268
           KNMGEILKA GA YSSVVKTTIMLADL DFK VNEIY KYFPAP+PARSTYQVAALPL+A
Sbjct: 121 KNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNA 180

Query: 269 KVEIECIATL 276
           K+EIECIATL
Sbjct: 181 KIEIECIATL 187

BLAST of ClCG10G005360 vs. TAIR 10
Match: AT3G04480.1 (endoribonucleases )

HSP 1 Score: 42.4 bits (98), Expect = 7.1e-04
Identity = 27/100 (27.00%), Postives = 51/100 (51.00%), Query Frame = 0

Query: 160 APAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEILKAGGASY 219
           AP+ +GPYSQA    ++L ++G LGL+P T    ++    +  Q L N   I ++   S 
Sbjct: 424 APSCIGPYSQATLHQSVLHMAGQLGLDPPTMNLQTEGAIAELNQALTNSEAIAESFNCSI 483

Query: 220 SSVVKTTIMLADLKDFK-KVNEIYGKYFPAPAPARSTYQV 259
           SS     ++    +  + + N+++ K+      A+S+ +V
Sbjct: 484 SSSAILFVVFCSARTKQSERNQLHEKFVTFLGLAKSSRRV 523

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038903207.12.0e-9395.72reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida][more]
XP_008463412.13.4e-9395.72PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo][more]
XP_004152932.12.9e-9294.65reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus] >KGN56123.1 h... [more]
XP_022976324.13.0e-8992.51reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima][more]
XP_022942433.15.7e-8891.44reactive Intermediate Deaminase A, chloroplastic [Cucurbita moschata] >XP_023545... [more]
Match NameE-valueIdentityDescription
Q94JQ47.5e-6773.16Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
P527582.7e-3251.222-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=... [more]
P527602.7e-3252.852-iminobutanoate/2-iminopropanoate deaminase OS=Mus musculus OX=10090 GN=Rida PE... [more]
Q101216.0e-3253.28RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 ... [more]
P527595.1e-3151.222-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Ri... [more]
Match NameE-valueIdentityDescription
A0A1S3CJ541.7e-9395.72reactive Intermediate Deaminase A, chloroplastic-like OS=Cucumis melo OX=3656 GN... [more]
A0A0A0L2Z61.4e-9294.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077580 PE=3 SV=1[more]
A0A6J1IN691.5e-8992.51reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1FUT72.7e-8891.44reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita moschata OX=3662 G... [more]
A0A6P4APP42.1e-8083.42reactive Intermediate Deaminase A, chloroplastic OS=Ziziphus jujuba OX=326968 GN... [more]
Match NameE-valueIdentityDescription
AT3G20390.15.3e-6873.16endoribonuclease L-PSP family protein [more]
AT3G04480.17.1e-0427.00endoribonucleases [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 158..274
e-value: 1.2E-42
score: 144.8
IPR006175YjgF/YER057c/UK114 familyPANTHERPTHR118032-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDAcoord: 89..275
coord: 1..62
IPR006056RidA familyTIGRFAMTIGR00004TIGR00004coord: 152..274
e-value: 3.4E-51
score: 170.6
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 147..274
e-value: 1.6E-49
score: 169.3
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 152..275
NoneNo IPR availablePANTHERPTHR11803:SF45PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEINcoord: 89..275
coord: 1..62
NoneNo IPR availableCDDcd00448YjgF_YER057c_UK114_familycoord: 167..273
e-value: 1.12868E-44
score: 145.009
IPR019897RidA, conserved sitePROSITEPS01094UPF0076coord: 251..269

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G005360.1ClCG10G005360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1901565 organonitrogen compound catabolic process
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
molecular_function GO:0019239 deaminase activity