
ClCG10G004170 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGAGTTCCATGCTGTGAGAAAGAAAATGTTAAGAAGGGACAGTGGACTCCTGAAGAAGATAACAAGCTTTCGTCCTACATTGCCCAGCATGGCACTCGCAACTGGCGCCTTATTCCCAAGAATGCTGGTATCACTCTCTCTCTAGAACATTTGTAATCATTAAGTTACGCAATGGCTAATGCCTGCCATGATGTTTAGGTCTCCAAAGATGTGGGAAGAGCTGCAGGCTACGTTGGACTAATTACCTGCGCCCCGACCTCAAGCACGGCCAGTTTTCGGACATGGAAGAGCAAACTATTGTCAAGCTACATTCTGTTGTTGGCAACAGGTACACCATCTTATTGACATCAACATTGCTTGTTTATCAACAAAATGAATTGTGTATTATGATTTTCTTGTATATAAGAGGATCCGTTTCAACATTGCAGGTGGTCGCTGATTGCAGCTCAGTTACCCGGTCGCACCGACAATGATGTCAAGAATCACTGGAATACTAAGCTGAAAAAGAAGCTAACAGATATGGGCATTGATCCAGTCACTCACAAACCAATTTCCCATCTCTTGGCTGAAATTGCCACCACTTGGGCCCCTCCACAAGCTGCCCATCTTGCCGAAGCAGCACTCGGCTGCTTCAAAGACGAAATGCTCCACCTTTTAACTAAGAAGCGTGTCGATTTCCAACTTCAGCAGGCTAATAATGTACCGCCTGGAAGTTCCACTGGAACTTACATTCACGGCGAACAAAATGAGAAAGATGGTACTGTTGAGAATATCAAACTTGGTTTGGCAAGGGCCATTCAACAGCCTGATCTGATCTCCCCTTATAAGCCTTGGAGTTCTACTGATGCAGCAGGGACAAGCAATTGTTTTCCTGCATCGACATCGGGATTTCAATACGCTCCACTGTCGTTCGGCAACGAGGGGGATGGGTCGTCATGGAGCCAGAGTATATGTACTGGAAGCACGTGCACAGCAGGAGAACAACAGGGCCAACTGCATGAAATCCTCGAAGAAACTGAAGAGGAGCTATCAGAGGGTGGAAAAGAGATAAGAAATGGGACAAGTATATTCAGTTCAGACTCAGTGTTGTGGGATTTACCATGTGATGATCTGATGAATCCAATAGTCTGAGGAAGATGAAACAAAAGAGTTAAAAATGGCACAAAAAATTTCTAAATAATAAATTCTATCACATCAAATGATGCAACTGTGAATAGTGCTCACTTTATGGGGTACAATAAAGTACATTCAACAAAGGTTTACAACTGTAGCAACTAATATATATGTTTTCCTAGTTTAAATATTGCATTGCTGATCAAGCAAAGTATAAGCCAGAATAATTCAGTCAAATTGCTCTATCATATGAACTCAATAATTCCACATCCAGTTACACTTCGGTATATGAATCAGAATATTTCAAGAATCTCCTCTAGGAAAATAGGAATAAAAGAATAAGGAAGCAACTGGATATTTTGTTGTATTGATATAACAACTCAAGAGGAGGGTGAATAAAGTTTAATCAAACTAAATTAGACTTTTAGGAGAAAATGTGCCAATGAACTTTTTGTAAAAATATAATTTAAACAACAACTCATGCAAATAAATTCATCCCAAAATAAATAAGAAATTGACACAAACAATTGCAAGCACCCAAATTAATTATAATATAAAGATTAGTAATAAGTATGCTAAGTTAAATTCAAAGAGTGTTGCAATGGGTTGAAAAAAATTGGATTTACAAATCAAACCATGGTTTTCTAGATTTAATTACAAATATAGCAGAAGATTTTAATTTGATTTGTGTTCATCAATTTTCCCCATTGGTGTATTGTCATCCTATCTAATATATTTCATATTTTATACATCAATAGCATATCTAATATATTTTATATTTTTTATTTTATGTTCCATATATTAGTCATATATTAATAGTATATATGATGTATTTTATATGTAGTATAATAGTGTATCTAATATAATTTATATTTTGTATATTATTAGTATATGAATAGTATATCTGATATAAAGGTATATAAGTCAACTGATATACCCAATAATATATATCAATCAATACTCACTAAAAATTCATTTTAAGTATAACGACATCGACACATCAGTGATAGTCTATACTTGAAATTGCATTTTTGAATGAGTATTGATATACATTATTGATACACTAACGATATACTTGAAATGCATTATGAATGAGTGCTAATATACTATTGAAACACACCAATATTATAACTTTATATGAAATTTGCATGAATGTTAATATACTACTAATACACTAATGTTATACTTGAAATTGCATCTTTGAATGAGTGTTGATATACTACTGATGCACTAATGATATAATTGAAATGTGGTTTGAATAAATTTGATATACTATTGATACACCAATACCATACTTGAAAGGTATTTTCAATGAGTGCTAATATACTATTAATCCACCAATGTTATACTTGAAACTAAATATAAAACAAATGTGATATATTATTAATACACTAATAATATACTTGAAATCATAAATTTCTTAATCAATATTGACATACTATTGAAACATGATAATGTTATACTTTAAATAAAATTTAAATAATTGTTGATAAATTACAAACCACTAATGTTCCAAATTACATTTGGAATGAGTGTTGATATATTATTATACACCAATAAGAGATACTTGAAATGCATTTTTAAGAAGTATATATATGCTATTAATACAGTAATGTTATACTTGTGATGAATTTTGAATGAATGTTGAATGTTGACATCCTATAGATACACCAAAATTATTATTAAAATTGCATTGAAAACAAATGTGATGCGAATAAACTATTCACCCCCACAATAGAAGACTGTAATTTCTAAATAATCTAGAAACTGAGGCGGGATCAGTTTTGAGAGTGTTTGTAGGTGAGTTAGACATGTTTAATTCTCTTTAAATATGTTTTTTTTAGTAACTTGACATTAAAAAAATGTATTTTAGTCACATTTGGGCTTTAATTTGTCATTCACCAACTATGATGATATCATTTGTTTTCAAGCCTCTCAATTTTATGTTTAACAATGGGAGGTTATTCGTTAACATCAATTTCTATGATAATTCGTAGAAATACAAGTTATTGTACTCTTTATTTAGAATAATTAAAGTAATTTAGGAGATGAATGCATGAGTTTGAGAAGAAAATAGTGTAATATGAATAACTTTATGTTTATGATGTTTACAAAAGCTTCTATCTTGGAAATTATGAGTTATATGTCTTTAAACCCAAGATTTGACAAAAAGGAACAAAAATGCTAAAGGATAGGGTTGGCAAAAATCCTTGTGGGGTCAAGTCCCCACCCCGATCAAGGCTCTCCCTCGCCCCGCCCCGACCCCGTTGTCAACCCTGCTAAAGGACAAGAAAAAGATGCTACCAGAATCGCTAAGTCCACATCATTCCACTGACCAACGCGTCGAAGAACCCGACATTGAGAAGAAAAGAATCGTTAGACGTATGGGCGGTGGCTGTCGTGTCTATGTGCAAGTCAATGACTAA ATGGGCAGAGTTCCATGCTGTGAGAAAGAAAATGTTAAGAAGGGACAGTGGACTCCTGAAGAAGATAACAAGCTTTCGTCCTACATTGCCCAGCATGGCACTCGCAACTGGCGCCTTATTCCCAAGAATGCTGGTCTCCAAAGATGTGGGAAGAGCTGCAGGCTACGTTGGACTAATTACCTGCGCCCCGACCTCAAGCACGGCCAGTTTTCGGACATGGAAGAGCAAACTATTGTCAAGCTACATTCTGTTGTTGGCAACAGGTGGTCGCTGATTGCAGCTCAGTTACCCGGTCGCACCGACAATGATGTCAAGAATCACTGGAATACTAAGCTGAAAAAGAAGCTAACAGATATGGGCATTGATCCAGTCACTCACAAACCAATTTCCCATCTCTTGGCTGAAATTGCCACCACTTGGGCCCCTCCACAAGCTGCCCATCTTGCCGAAGCAGCACTCGGCTGCTTCAAAGACGAAATGCTCCACCTTTTAACTAAGAAGCGTGTCGATTTCCAACTTCAGCAGGCTAATAATGTACCGCCTGGAAGTTCCACTGGAACTTACATTCACGGCGAACAAAATGAGAAAGATGGTACTGTTGAGAATATCAAACTTGGTTTGGCAAGGGCCATTCAACAGCCTGATCTGATCTCCCCTTATAAGCCTTGGAGTTCTACTGATGCAGCAGGGACAAGCAATTGTTTTCCTGCATCGACATCGGGATTTCAATACGCTCCACTGTCGTTCGGCAACGAGGGGGATGGGTCGTCATGGAGCCAGAGTATATGTACTGGAAGCACGTGCACAGCAGGAGAACAACAGGGCCAACTGCATGAAATCCTCGAAGAAACTGAAGAGGAGCTATCAGAGGGTGGAAAAGAGATAAGAAATGGGACAAGTATATTCAGTTCAGACTCAGTGTTGTGGGATTTACCATGTGATGATCTGATGAATCCAATAGGTTGGCAAAAATCCTTGTGGGGTCAAGTCCCCACCCCGATCAAGGCTCTCCCTCGCCCCGCCCCGACCCCGTTGTCAACCCTGCTAAAGGACAAGAAAAAGATGCTACCAGAATCGCTAAGTCCACATCATTCCACTGACCAACGCGTCGAAGAACCCGACATTGAGAAGAAAAGAATCGTTAGACGTATGGGCGGTGGCTGTCGTGTCTATGTGCAAGTCAATGACTAA ATGGGCAGAGTTCCATGCTGTGAGAAAGAAAATGTTAAGAAGGGACAGTGGACTCCTGAAGAAGATAACAAGCTTTCGTCCTACATTGCCCAGCATGGCACTCGCAACTGGCGCCTTATTCCCAAGAATGCTGGTCTCCAAAGATGTGGGAAGAGCTGCAGGCTACGTTGGACTAATTACCTGCGCCCCGACCTCAAGCACGGCCAGTTTTCGGACATGGAAGAGCAAACTATTGTCAAGCTACATTCTGTTGTTGGCAACAGGTGGTCGCTGATTGCAGCTCAGTTACCCGGTCGCACCGACAATGATGTCAAGAATCACTGGAATACTAAGCTGAAAAAGAAGCTAACAGATATGGGCATTGATCCAGTCACTCACAAACCAATTTCCCATCTCTTGGCTGAAATTGCCACCACTTGGGCCCCTCCACAAGCTGCCCATCTTGCCGAAGCAGCACTCGGCTGCTTCAAAGACGAAATGCTCCACCTTTTAACTAAGAAGCGTGTCGATTTCCAACTTCAGCAGGCTAATAATGTACCGCCTGGAAGTTCCACTGGAACTTACATTCACGGCGAACAAAATGAGAAAGATGGTACTGTTGAGAATATCAAACTTGGTTTGGCAAGGGCCATTCAACAGCCTGATCTGATCTCCCCTTATAAGCCTTGGAGTTCTACTGATGCAGCAGGGACAAGCAATTGTTTTCCTGCATCGACATCGGGATTTCAATACGCTCCACTGTCGTTCGGCAACGAGGGGGATGGGTCGTCATGGAGCCAGAGTATATGTACTGGAAGCACGTGCACAGCAGGAGAACAACAGGGCCAACTGCATGAAATCCTCGAAGAAACTGAAGAGGAGCTATCAGAGGGTGGAAAAGAGATAAGAAATGGGACAAGTATATTCAGTTCAGACTCAGTGTTGTGGGATTTACCATGTGATGATCTGATGAATCCAATAGGTTGGCAAAAATCCTTGTGGGGTCAAGTCCCCACCCCGATCAAGGCTCTCCCTCGCCCCGCCCCGACCCCGTTGTCAACCCTGCTAAAGGACAAGAAAAAGATGCTACCAGAATCGCTAAGTCCACATCATTCCACTGACCAACGCGTCGAAGAACCCGACATTGAGAAGAAAAGAATCGTTAGACGTATGGGCGGTGGCTGTCGTGTCTATGTGCAAGTCAATGACTAA MGRVPCCEKENVKKGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSDMEEQTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLTDMGIDPVTHKPISHLLAEIATTWAPPQAAHLAEAALGCFKDEMLHLLTKKRVDFQLQQANNVPPGSSTGTYIHGEQNEKDGTVENIKLGLARAIQQPDLISPYKPWSSTDAAGTSNCFPASTSGFQYAPLSFGNEGDGSSWSQSICTGSTCTAGEQQGQLHEILEETEEELSEGGKEIRNGTSIFSSDSVLWDLPCDDLMNPIGWQKSLWGQVPTPIKALPRPAPTPLSTLLKDKKKMLPESLSPHHSTDQRVEEPDIEKKRIVRRMGGGCRVYVQVND Homology
BLAST of ClCG10G004170 vs. NCBI nr
Match: XP_038904788.1 (transcription factor MYB80 [Benincasa hispida]) HSP 1 Score: 635.2 bits (1637), Expect = 3.8e-178 Identity = 303/320 (94.69%), Postives = 312/320 (97.50%), Query Frame = 0
BLAST of ClCG10G004170 vs. NCBI nr
Match: XP_008449008.1 (PREDICTED: myb-related protein 308 isoform X1 [Cucumis melo] >TYK19376.1 myb-related protein 308 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 627.9 bits (1618), Expect = 6.1e-176 Identity = 297/320 (92.81%), Postives = 310/320 (96.88%), Query Frame = 0
BLAST of ClCG10G004170 vs. NCBI nr
Match: XP_004148287.1 (transcription factor MYB80 isoform X1 [Cucumis sativus]) HSP 1 Score: 627.1 bits (1616), Expect = 1.0e-175 Identity = 297/320 (92.81%), Postives = 310/320 (96.88%), Query Frame = 0
BLAST of ClCG10G004170 vs. NCBI nr
Match: XP_022143468.1 (transcription factor MYB80 [Momordica charantia]) HSP 1 Score: 616.7 bits (1589), Expect = 1.4e-172 Identity = 298/325 (91.69%), Postives = 308/325 (94.77%), Query Frame = 0
BLAST of ClCG10G004170 vs. NCBI nr
Match: KAG6577529.1 (Transcription factor MYB80, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 616.3 bits (1588), Expect = 1.8e-172 Identity = 295/320 (92.19%), Postives = 307/320 (95.94%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy Swiss-Prot
Match: Q7XQN1 (Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=2 SV=2) HSP 1 Score: 355.5 bits (911), Expect = 7.6e-97 Identity = 201/371 (54.18%), Postives = 244/371 (65.77%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy Swiss-Prot
Match: Q9XHV0 (Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 1.0e-93 Identity = 192/339 (56.64%), Postives = 225/339 (66.37%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy Swiss-Prot
Match: Q9LSI7 (Transcription factor MYB35 OS=Arabidopsis thaliana OX=3702 GN=MYB35 PE=1 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.0e-57 Identity = 99/135 (73.33%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy Swiss-Prot
Match: Q9M0J5 (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 6.1e-54 Identity = 102/186 (54.84%), Postives = 128/186 (68.82%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy Swiss-Prot
Match: Q9M0Y5 (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 6.1e-54 Identity = 94/134 (70.15%), Postives = 112/134 (83.58%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy TrEMBL
Match: A0A5D3D717 (Myb-related protein 308 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00050 PE=4 SV=1) HSP 1 Score: 627.9 bits (1618), Expect = 2.9e-176 Identity = 297/320 (92.81%), Postives = 310/320 (96.88%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy TrEMBL
Match: A0A1S3BLZ8 (myb-related protein 308 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491010 PE=4 SV=1) HSP 1 Score: 627.9 bits (1618), Expect = 2.9e-176 Identity = 297/320 (92.81%), Postives = 310/320 (96.88%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy TrEMBL
Match: A0A6J1CQS6 (transcription factor MYB80 OS=Momordica charantia OX=3673 GN=LOC111013345 PE=4 SV=1) HSP 1 Score: 616.7 bits (1589), Expect = 6.8e-173 Identity = 298/325 (91.69%), Postives = 308/325 (94.77%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy TrEMBL
Match: A0A6J1EW30 (transcription factor MYB80-like OS=Cucurbita moschata OX=3662 GN=LOC111438718 PE=4 SV=1) HSP 1 Score: 613.2 bits (1580), Expect = 7.5e-172 Identity = 294/320 (91.88%), Postives = 307/320 (95.94%), Query Frame = 0
BLAST of ClCG10G004170 vs. ExPASy TrEMBL
Match: A0A6J1HQ33 (transcription factor MYB80-like OS=Cucurbita maxima OX=3661 GN=LOC111465072 PE=4 SV=1) HSP 1 Score: 610.9 bits (1574), Expect = 3.7e-171 Identity = 292/320 (91.25%), Postives = 305/320 (95.31%), Query Frame = 0
BLAST of ClCG10G004170 vs. TAIR 10
Match: AT5G56110.1 (myb domain protein 103 ) HSP 1 Score: 345.1 bits (884), Expect = 7.3e-95 Identity = 192/339 (56.64%), Postives = 225/339 (66.37%), Query Frame = 0
BLAST of ClCG10G004170 vs. TAIR 10
Match: AT3G28470.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 224.6 bits (571), Expect = 1.4e-58 Identity = 99/135 (73.33%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of ClCG10G004170 vs. TAIR 10
Match: AT4G05100.1 (myb domain protein 74 ) HSP 1 Score: 213.0 bits (541), Expect = 4.4e-55 Identity = 94/134 (70.15%), Postives = 112/134 (83.58%), Query Frame = 0
BLAST of ClCG10G004170 vs. TAIR 10
Match: AT4G28110.1 (myb domain protein 41 ) HSP 1 Score: 213.0 bits (541), Expect = 4.4e-55 Identity = 102/186 (54.84%), Postives = 128/186 (68.82%), Query Frame = 0
BLAST of ClCG10G004170 vs. TAIR 10
Match: AT4G21440.1 (MYB-like 102 ) HSP 1 Score: 209.9 bits (533), Expect = 3.7e-54 Identity = 92/133 (69.17%), Postives = 107/133 (80.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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