
ClCG10G002310 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATCCCTTTCCTTTTGAACCCAATACGTCACTCTCACATTCTCTCTCGCCACGTGTCCCACTCTCTCTCTCCTCTCTTTCTCTCTCTAGTTTCAGTGAAGCTCTGCAGTAGCCATCGGAGAGGTTACCAAACAAGCTTTCGCTTATGCTCCCTTCTTTTTCGCTCTCTATTTGGCCATTTTCCCCCTCTCTCTTCACTCTTCCTTCTTCTCTGCCTAAATTTTCGAAACCCCTTTTGTTTTTCTTTCGATTCAATTTCGAGTTGGACCGAGCAATCCGTACTCTTCCCCTCTCCCGTCGCTTCACCACTAATTTCTCTCTCTATCTTATTCATATCCCCATTCTTTTTCTATTTCCTTCTCTCTGTTTTTGGGCACTGGCATTCCGCTGTTTTTGGATTTTCCGGCTCTTTTTTCTTTTTTCTTTTGTTTTTTCTTTTTTTTTTTTTTTTGTTATGTTTCTGGGTTGTTTCTTTTAATCCTTGGCTCCTGTAGTGGAAATCGGTAACTGGGTCGGCTTTTGTTTTGGGTTTTTTGATTTTTGATCTGGGTTTCTGCCGTCATGAGTGCTGGAGGTGGGAATCGCTTAATCTCCGTTCAACCGGATGAGTTGAAGTTTCAGAGTATGTAATTTTGCTTTGATGTTTCTGATATATTCTTTTAGTGTATTGTATCTAGTTGTTTTTATCTACATTTGGTTGAATTTGCACTTGTTTTTCGTTTAATTCTTGTCTTGTTTCTGGGAGGAGAAAATTGAAATGATGAGATGAAGTTTTGTGATAGTTGTTGAGGATTAGGGTATGGATTTAGGGAGGGAGGGAGGGAGGAGTTGAGAGAAACTCCCAATATTGTGAGTCTGAGCATTTTTCAGGTCACCCTTGTTATTATATTTAAGGTTTGATGATTTCATAGGAGGAACTTTCTTTTGGAACTTACTAAATACTCAATTATTCAGTGAATGGAAACTTTCAATTTCCTCGCAATTAGAGTTGAGATTTATAGTATTTGTACTTTTTACAGACTATAATTTAGTTATATGATCATATCCTAGCCCAATGACATCTGCAGCCCTTCCCCTGTAGTCACTGTTCATCTTGTCCACTTTCAGTCTCTCCTCTTTCTTTTTCTTTTCTCCTTCTGGTCATTACATGGGGACAAAGACTCCAAGCTCCAAGGTTTTTTTATGGAGGTGGAAGCCTTTTCTATGAGCGGGCATACGCCTGTTGTGAACAAAAAGAAGATGATAACATTTGTATGTAGACTTGAGGCGAGCATCCATGAGGATTTTAATCGATTGTTGGGTAGCACTATCATATTTTTGTGATGAAAATTTTGGAGCTGGTTGATTGGGTCTAAAATAAGATTGGTTACCGTTGTTATCATGGCTAAATGTTTGGTGTTTTGTTATTGAACTCAAATGATTACTCTGTTGTATTGCATACATTGTTTTTTCTTTTCTTCCTAATCCCAAATGCCTTTCAGTATTATCCATGGCTTCCCTCAATCCATGGAATCTTAGGAAAAAGAAGTAAAGAACTCTTCCATAACCTTGTGTAAATTTGTAATACTAGCAATGTATTGTATCAAAGATAAGATAATGGATGTTCATTCAGTGGTTTTGTTTGTTTGCGAGTACAATTTTGTTGTATTCTTATATGTGGACTTTGTTACCTCTGTTTTCCGCGTGGACTCGTTTGCGTTTTGAACTTATGAACGTGGGGCCTATATTATCAGTTGAGTTGGACAAGCAGAGCTTTTGTGATCTTAAAGTTGCAAACAACACAGAACACCATGTTGCCTTTAAGGTAGGTAATAGTTTGATTATTTTATAAATGCATACATAATTGACATTGAATATCCATTTTGGAAAGCATTTTGCATAAATGGTTGACTTCAAATTTATTTCTTCATTGCTCATGCTAGGTCAAAACAACCTCGCCCAAGAAGTACTTTGTGCGTCCCAACACTGGTGTTGTACAGCCTTGGGATTCTTGCATCATAAGAGGTTCTAATTTTGATATAAGCATTAGATCTTTATGCTTTGCAATGATCTTTAACACACAATATCTTCAAAAATTTGAGGATGCAATTGCAATTGTTTCAAGCTTGAAAGAAAAATAATGTTGGTTCATTAGAAAATGGAAAATCTGTAGTGGCTTTTTCAATACCACATCATGTAAAACTAGTAAGTAGGCTTGACAAATAAGATTTCCTTTTCACTAGCAGATGTTAACTGCTACTTGGCCAGCTAACCTAAATATTATTTGCATTCAAGTTATCTCTCTTGATTCATCTTGGTTTTTTTTATCTGTTAACTAAAGTCAAAATTGTTACTGGATTCACAGTGACTCTCCAAGCCCAGCGAGAATATCCTGCAGATATGCAATGCAAAGATAAGTTTCTCTTACAAAGTACAATAGTCACACCAAATACTGATGTAGATGAGCTTCCTTCTGATGCTGTAAGAATTTTGACTTGCGCCTTAGTTTGAATGGACATACTGTTTCATTCTAATAAGCTTCATTCGAAACATTATTTTCTTATTTTCAGTTCAATAAGGACAGTGGAAGGACAATCGAGGAATGCAAGCTTAAGGTTATCTATATTTCTCCGACATCAGCCTTGGGGAACTCAGAAGATGAAAAGAATTCATCTCAAAGCTCCTCGGTGAGTGCTGAAATTCTCCTTTTTGTCCCCTGAATTTATATATGTGTGTGTGTGTGTGTGTATGTATTGGACCTTCTCTTTTGTTTGTATGACCATGTTATAGTGTAATTGTGTGCTTGCAATAGATGTGTGAGATAAGGAATTCAAAATATCACTTTTATTCTGATTTCATCCTGTTATTAAATATCTATTTTCGACATCTGTTGTTCAGTAACTGTCTGCATGTTCATAAAGCTAAACCTCTATCACTCGAAAATTTTAAACACACATAGATTGTTGTTCTTTTTCCTTATCTCATGTGCTATTGGTTCTAACACCGGCAGGCTTTACAACGTCTGAAGGAAGAAAGAGACATGGCTATAAGGCAAACCCATCAATTACAACAGGAACTGGTAAGTCACACCTCTCTGCTCTATTATACTTTTTTTGCTGCTAAAAGACTTGTAATAACCAAAATCTTTAAACTTGTTCAATGCATAGTTCATATAGTAATGAGTTGAATCCGAATGAAGGACCTAAAATTAAATTCAAGATGTGTTTGAATCTGAAATTTTGTCACTCATACGTTTCTTACGGATGAATAGTAGGATTGTACAAAAGCATTAACGTCATAAATACAATAATACAAAATCATACATGTTTCAAGTTACAGTTTAACAACCATCTAAGGATTAATAGCATAGGATTCTGAGAGAGAATCTCGATATAGGAATTTGAGCAAGATGGAGTCCAGCATGATCTCTCTTTTCTTTTTCTTTCTCTTTTTCTTTTTTTTTTNGGGGTAAGAAATGAAGCTTTTATGAGCAAAATAGCACAAAAAAACCAACAAGAAGCCCAACAAAAGGGAGACCCAAAACACAACTTACAAGAATGGACTTCAATCCACCAAAATCATAATTACAAAAAGGTAGTTTGTTAAATGTTCAGTTTTATAAAAATGGTAGTTTGTTAAAGCTCGAGAATTGACCATTAACTTTTTTTTAATGATAAACCAACCCTTCATTAAAAAAAATAAAAAAATTAAAAAAAAATTTAAAAAATTAAAAAAAAAATGTCAAGGCAAAAAGAAAAAGGAAAAAAATGTCTAACAAAGGAAGGAGCTCCAATTAAGCCAAATAAGACCGAGCGAATAATTACAACAAAACTTCATCGTCGAAGCATAGAGAGATACATGGAACCTAACAAGGGATCAAACATCACTAGATTTTGTCTCCATTCCTATGAAGACTATTATTTCTCTCCATCCAAAGATCTCACAAGAAAGTATACACTTGAGCTTATCACAAAAACCTCATTTTCCTCCAAACATGGGATGGAAAATGAAATAGGTAGTATGGGCTACCTTTGTCCCACATTGGTTAGAATGGGATGACCAATGTGGTACTTAAGCGGCTTGGCTCTCCCAACTCAATAGGTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCCAATTATGGTATCAGAGCCGGTTGTTGACGTTCTTGAGTGGAACTAGCAGAGGGTTTTGACCGGGTGTGGCCGAGTGAAGTACCGTCGGAGTAGTCGCCGTGGTTTGGCTCTCCCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTCTAAGGTGTGTAAGTATCTAACAAAGTCACTCCAAATAGACCGTACAAAATTGCAGCTCCAAAGAATATGATCCAAACATTCCTTTGCCCTCCAACAAAAAATTGCCTCTAAACTTGGAATACAAATGGCTCAAATTCCATTACCTTGAGAGGATAATCGTTATCATTCATTTGACATACACATTTCTGAGCTCAATAATTATTTGGTTCTTAGTTCCAAAGGTTACCTATGCAATATGGATGTTTCTTTTCCTTTTCCTTTCATATAAGTATTATATTGGAGTATCCCCACTCCCTGCACTATGTTCATGGCCCTCCTCTGCTAATCGTCAGAGAGGTTTATTAAAGTTATTTATTTTTCTGTTAGTGACTGATGACCTTGTCAATGTCGTCTTAACAACCAATGTAGAACGTCGATGATGACTTAATACTTTATACCAATTATTACTCTCCAATAGGACATGATGAAGAGACGAAAATATCGGAAAGGCGATCCTGGCTTCTCATTCACTTTCGCGATCTTCGCGGGGATCGTCGGAATCATGGCAGGTTTCCTCTTGAATCTCACATTATCTTCACCATCTACCGAATGACTTGGACCATGTTTCAGATCCTGAGCAGACAATTTTCTGGTCAATTTCATTGTATAATTTCTACTTCCCAATTTTTGTACATTAAGAAACGCTGCAAATTTGTGGTCTTGATACCTTAATTTTTCCAAAATGTTGATTTTTGTGCCAATCGACTGTGAATGTTGCTGGCGATCTCTTCTCAATTCTCCCTCAAAACTGAGGGGTTCAGAGAAGTTAAGTTTTAGCTCATATCTTTTATATTACTAAATTATGTGATGTTTTTGGATGTAATTTCTGTATGTAATATGAATTTGAATACATATTGATCAAAATGGAGGTTTGATCCTAAAATCTTTAGTTAAGTTGA AAATCCCTTTCCTTTTGAACCCAATACGTCACTCTCACATTCTCTCTCGCCACGTGTCCCACTCTCTCTCTCCTCTCTTTCTCTCTCTAGTTTCAGTGAAGCTCTGCAGTAGCCATCGGAGAGGTTACCAAACAAGCTTTCGCTTATGCTCCCTTCTTTTTCGCTCTCTATTTGGCCATTTTCCCCCTCTCTCTTCACTCTTCCTTCTTCTCTGCCTAAATTTTCGAAACCCCTTTTGTTTTTCTTTCGATTCAATTTCGAGTTGGACCGAGCAATCCGTACTCTTCCCCTCTCCCGTCGCTTCACCACTAATTTCTCTCTCTATCTTATTCATATCCCCATTCTTTTTCTATTTCCTTCTCTCTGTTTTTGGGCACTGGCATTCCGCTGTTTTTGGATTTTCCGGCTCTTTTTTCTTTTTTCTTTTGTTTTTTCTTTTTTTTTTTTTTTTGTTATGTTTCTGGGTTGTTTCTTTTAATCCTTGGCTCCTGTAGTGGAAATCGGTAACTGGGTCGGCTTTTGTTTTGGGTTTTTTGATTTTTGATCTGGGTTTCTGCCGTCATGAGTGCTGGAGGTGGGAATCGCTTAATCTCCGTTCAACCGGATGAGTTGAAGTTTCAGATTGAGTTGGACAAGCAGAGCTTTTGTGATCTTAAAGTTGCAAACAACACAGAACACCATGTTGCCTTTAAGGTCAAAACAACCTCGCCCAAGAAGTACTTTGTGCGTCCCAACACTGGTGTTGTACAGCCTTGGGATTCTTGCATCATAAGAGTCAAAATTGTTACTGGATTCACAGTGACTCTCCAAGCCCAGCGAGAATATCCTGCAGATATGCAATGCAAAGATAAGTTTCTCTTACAAAGTACAATAGTCACACCAAATACTGATGTAGATGAGCTTCCTTCTGATGCTTTCAATAAGGACAGTGGAAGGACAATCGAGGAATGCAAGCTTAAGGTTATCTATATTTCTCCGACATCAGCCTTGGGGAACTCAGAAGATGAAAAGAATTCATCTCAAAGCTCCTCGGCTTTACAACGTCTGAAGGAAGAAAGAGACATGGCTATAAGGCAAACCCATCAATTACAACAGGAACTGGACATGATGAAGAGACGAAAATATCGGAAAGGCGATCCTGGCTTCTCATTCACTTTCGCGATCTTCGCGGGGATCGTCGGAATCATGGCAGGTTTCCTCTTGAATCTCACATTATCTTCACCATCTACCGAATGACTTGGACCATGTTTCAGATCCTGAGCAGACAATTTTCTGGTCAATTTCATTGTATAATTTCTACTTCCCAATTTTTGTACATTAAGAAACGCTGCAAATTTGTGGTCTTGATACCTTAATTTTTCCAAAATGTTGATTTTTGTGCCAATCGACTGTGAATGTTGCTGGCGATCTCTTCTCAATTCTCCCTCAAAACTGAGGGGTTCAGAGAAGTTAAGTTTTAGCTCATATCTTTTATATTACTAAATTATGTGATGTTTTTGGATGTAATTTCTGTATGTAATATGAATTTGAATACATATTGATCAAAATGGAGGTTTGATCCTAAAATCTTTAGTTAAGTTGA ATGAGTGCTGGAGGTGGGAATCGCTTAATCTCCGTTCAACCGGATGAGTTGAAGTTTCAGATTGAGTTGGACAAGCAGAGCTTTTGTGATCTTAAAGTTGCAAACAACACAGAACACCATGTTGCCTTTAAGGTCAAAACAACCTCGCCCAAGAAGTACTTTGTGCGTCCCAACACTGGTGTTGTACAGCCTTGGGATTCTTGCATCATAAGAGTCAAAATTGTTACTGGATTCACAGTGACTCTCCAAGCCCAGCGAGAATATCCTGCAGATATGCAATGCAAAGATAAGTTTCTCTTACAAAGTACAATAGTCACACCAAATACTGATGTAGATGAGCTTCCTTCTGATGCTTTCAATAAGGACAGTGGAAGGACAATCGAGGAATGCAAGCTTAAGGTTATCTATATTTCTCCGACATCAGCCTTGGGGAACTCAGAAGATGAAAAGAATTCATCTCAAAGCTCCTCGGCTTTACAACGTCTGAAGGAAGAAAGAGACATGGCTATAAGGCAAACCCATCAATTACAACAGGAACTGGACATGATGAAGAGACGAAAATATCGGAAAGGCGATCCTGGCTTCTCATTCACTTTCGCGATCTTCGCGGGGATCGTCGGAATCATGGCAGGTTTCCTCTTGAATCTCACATTATCTTCACCATCTACCGAATGA MSAGGGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVKIVTGFTVTLQAQREYPADMQCKDKFLLQSTIVTPNTDVDELPSDAFNKDSGRTIEECKLKVIYISPTSALGNSEDEKNSSQSSSALQRLKEERDMAIRQTHQLQQELDMMKRRKYRKGDPGFSFTFAIFAGIVGIMAGFLLNLTLSSPSTE Homology
BLAST of ClCG10G002310 vs. NCBI nr
Match: XP_038905973.1 (vesicle-associated protein 2-1 [Benincasa hispida]) HSP 1 Score: 410.6 bits (1054), Expect = 8.6e-111 Identity = 210/224 (93.75%), Postives = 212/224 (94.64%), Query Frame = 0
BLAST of ClCG10G002310 vs. NCBI nr
Match: XP_008448784.1 (PREDICTED: vesicle-associated protein 2-1 [Cucumis melo] >KAA0041052.1 vesicle-associated protein 2-1 [Cucumis melo var. makuwa] >TYK12062.1 vesicle-associated protein 2-1 [Cucumis melo var. makuwa]) HSP 1 Score: 409.5 bits (1051), Expect = 1.9e-110 Identity = 210/224 (93.75%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of ClCG10G002310 vs. NCBI nr
Match: XP_004147234.1 (vesicle-associated protein 2-1 [Cucumis sativus] >KGN55827.1 hypothetical protein Csa_011407 [Cucumis sativus]) HSP 1 Score: 406.4 bits (1043), Expect = 1.6e-109 Identity = 207/224 (92.41%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of ClCG10G002310 vs. NCBI nr
Match: XP_022155548.1 (vesicle-associated protein 2-1 [Momordica charantia]) HSP 1 Score: 399.1 bits (1024), Expect = 2.6e-107 Identity = 203/224 (90.62%), Postives = 209/224 (93.30%), Query Frame = 0
BLAST of ClCG10G002310 vs. NCBI nr
Match: XP_023551809.1 (vesicle-associated protein 2-1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 398.7 bits (1023), Expect = 3.4e-107 Identity = 202/224 (90.18%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.1e-73 Identity = 143/228 (62.72%), Postives = 175/228 (76.75%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.4e-39 Identity = 89/245 (36.33%), Postives = 140/245 (57.14%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.4e-39 Identity = 95/240 (39.58%), Postives = 141/240 (58.75%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 4.5e-38 Identity = 88/245 (35.92%), Postives = 140/245 (57.14%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.9e-29 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy TrEMBL
Match: A0A5A7TC60 (Vesicle-associated protein 2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00770 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 9.3e-111 Identity = 210/224 (93.75%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy TrEMBL
Match: A0A1S3BLE3 (vesicle-associated protein 2-1 OS=Cucumis melo OX=3656 GN=LOC103490849 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 9.3e-111 Identity = 210/224 (93.75%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy TrEMBL
Match: A0A0A0L5E3 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017210 PE=4 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 7.9e-110 Identity = 207/224 (92.41%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy TrEMBL
Match: A0A6J1DN90 (vesicle-associated protein 2-1 OS=Momordica charantia OX=3673 GN=LOC111022662 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107 Identity = 203/224 (90.62%), Postives = 209/224 (93.30%), Query Frame = 0
BLAST of ClCG10G002310 vs. ExPASy TrEMBL
Match: A0A6J1HQA2 (vesicle-associated protein 2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111465113 PE=4 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107 Identity = 202/224 (90.18%), Postives = 210/224 (93.75%), Query Frame = 0
BLAST of ClCG10G002310 vs. TAIR 10
Match: AT5G47180.1 (Plant VAMP (vesicle-associated membrane protein) family protein ) HSP 1 Score: 277.7 bits (709), Expect = 8.1e-75 Identity = 143/228 (62.72%), Postives = 175/228 (76.75%), Query Frame = 0
BLAST of ClCG10G002310 vs. TAIR 10
Match: AT5G47180.2 (Plant VAMP (vesicle-associated membrane protein) family protein ) HSP 1 Score: 277.7 bits (709), Expect = 8.1e-75 Identity = 143/228 (62.72%), Postives = 175/228 (76.75%), Query Frame = 0
BLAST of ClCG10G002310 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 ) HSP 1 Score: 164.5 bits (415), Expect = 1.0e-40 Identity = 89/245 (36.33%), Postives = 140/245 (57.14%), Query Frame = 0
BLAST of ClCG10G002310 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein ) HSP 1 Score: 163.7 bits (413), Expect = 1.7e-40 Identity = 95/240 (39.58%), Postives = 141/240 (58.75%), Query Frame = 0
BLAST of ClCG10G002310 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein ) HSP 1 Score: 159.5 bits (402), Expect = 3.2e-39 Identity = 88/245 (35.92%), Postives = 140/245 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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