ClCG10G001280 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G001280
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Survival motor neuron
Location	CG_Chr10: 1307330 .. 1313924 (-)
RNA-Seq Expression	ClCG10G001280
Synteny	ClCG10G001280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGAGGGTAGTCCTTTAATTTGATGTCTTGCCATATATGCTATATGGAGTTGTTTGACTGGGCTCAAAGAACACTAGATTTTGGAGTCAGGGAAGTTATGGAACGAGTCCTATAATTTTTTGGGTTGTTCTTTTTATCATGGCAAGCTAGAGGGCTCCATTATCAATCTCCGTAGGTCTTATTGTGGGTTCTGGCCCCTAGACCCTGTTCTTTTATTTTTCTGTGCAGTTGTATCTCATTCTCATCAAAGAAGAGAAGGGAGATAGATTGGAAGAAAAGCACCTCTTGAAGCTTGAAGATTTCTTTTGTCTTCTATGAGCTTATTTTGATGAATTGCCGTAGCTAGTCTCCTTGTTCTGTGGGATATCTTGTAACTTCTCTTCAATTATTTCCATTAGGGAAAATAAAATACAGGAAAAGTAACATATAGTTAGTCCTTTGAAGTTATCCTGATTAATATTTTATTATTCTCTCTTAAACTTTTGCTTCTTAAAAAAACAGGATGGTAGATGAAGAGAGCTATATTGGGGACATTAATGTTGAGTTTGACGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGATGCTCTACATGTGAAAGAGACGCAACAGAAGCCCATTGAAGACTCCAATTTAAGTCTAAAAGGTGAAGAGGACTATAACCAGCTACTCAAGCAGTATTATGAGCTTGAAGAGAAGAGACAGAAGGTTCTAGAACGGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCAACGCTGGTTCTGATGTTGGAACTCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCATTACCAAGCAATGCCCTCCTCTTTGCCCTCCAGTTGTCCAATTTTAGCTGGCATGTGATCTCGATTCTCCATTTGTCCCTTGTTTGGAATGCTTGTTGTTGGCAACACTGGTACTCATTAATCATTGTTCATTCATTGGCTACAGGTCCTCAAAGTTCGTCCCTTGCTGATGGTGACATTATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATAGCTTCCATGAAGACTGTAAATAAAGGTAGGCATGACTATATCTCGTCAAGTACTTTTAGATTATCTGAATTTCTTTTTACTCTTTGATCAAAGATTTTTCTTATTTATGCCAATGACATAGATATTTTGTATAAATAACAAAATTTATTATACATAGCTCAACTGGTTAAGACATCATATACTTCTTAAAGGTTCAAGGTTTGAATTATAAATTAAAAAAAAAAAAGAGAGAGAGAAAAGTCAAGGGGAGGGAATCCCCACTTTGAAGGAGTTTAAAGAACACTGAAGAACACTGTTACGGGAGGAATTAATTATAAAAGACATGCAAGTACAAAATATCTTGGATAAAGTAAACAAACTAATGCTTTAAATTAGCTAGAGCATAAATTTATCACAAGATCTACTCTTATCCAAAATCTTTTATTGTTCCCTTTAAACGTAGCTCCTGAGGAAAGCTTGCAGGCATCCAATGGAATACCCATGAAAATTTATTGGTTTTTAAAATCGTATAATTGTTGAATATCCAAGTTAGTTGCTTATTTAGTAGTATTAGATAATATGAGGTTCTATCTCAAAACCAATTGGCTTTGAGAGGAGTAGCCCATCTATCTTATTAAGAACGTGAGGTCCTTTAATTTTTCCAATGTGGGATCCTCAACATGCCCCCTCAAGATGGTGAACCCAAAAGAGGCACCATTCTTGATCGGATCCCAATTTCTTTTTATTGGACCGAATACCCATTTTGGCTTTATGGGTTATGATACCAGATTAGATAATATGAGGTTCCATCTCAAAACCATATGGCTACTTAGGAGTAACCCATTTATCTTATCAAGAGTATGAGGTCCCTTAATTTTTCCAATGTGGGATCCAACATTTGGATTCAGCCTAATAAACTTTCTAGTCATATATTTGAATTTGACCCATAGAGTCAACTAATTTACAATTTAGTATTATTTTTGACTGTGAGGAGATATTCATTGCTCTTGCCTCCTATGTTGGAAGTTATTATCTTCATTTTCTTTTTCCTTTTTTTCCTTTTTCCTTAAGAAACATGAATTAGAGGCAACAGAATATGTCAAAGGGGACAGAAAAAGACCCCAACAAGCCTAAAAGAAACAATGCAAAGCAAAAGAAAGCTAATAAAAAGAATTAGAATAACTCTCTTAAAAAACTCTGAGAGAGATTTATTTTGTGTTTGCTATAAATTATTATTATTTTAATTCACATGCACACACCAAAAACTAAAGAACTGAGGGCGTGTTTGGCTTAAGGAGTTGGGAAGTAGGAGTTTGTGAACTCCACTCCTTGTTTGGCCCTAGGAGTTGGTGGGTCCCACTACTAAAAACATAAATTTTACATCTTATCAACTTCTTATATTGTGGGCTCTAGGAGTTCACAACTCCCTATATTTCATAACTCCCTACTTCTCACTATTTCACTCCTTACCCCAAACACCCCCTAAAAGGGTGGGGATACTCCCCTTTGAATGTTTGTATCTAAGGACTTTCGTGATTACTTGTTAGATCTTATTCTTTTGGATTTGAGTCTCTTTCTAGGTTGCTAGGTTTGCCCTTGATTAGTTCCTACGTGGCTGTTGCTGTTGTTTTTGTAGGCCTTCCTTCTGTCCTTTTCAGTCATGTGCCCTTTCAAAGATAAACTCTTTAGACCCCAATTATAGTTCATGGGATTTTTCTTAGTGTCATATTCGCTTCATGATTATGTGATGAGCATGGACGACCGAACTGCTTGATGCTCATCCTACGATGTTGGAATATGTATATTGCTGCAAGCCACCATCTAATTGAGCAATGAGCATTTAATTCCCATTTTTACTATTTTCAATATTGTCGTCTTCCCCATTTCATTTCTATATGATTTTCCATTAGCTTTAGATAAGATTATAGGGACGTTATGATGTGTAGGTTTTTGTAACTAGTGGTGGCAGAAAACATACCGGTGAAATGGGAAGAAGCACAGACACTTTATTTTGGCTAGCGTGTCCGTGTTCGACATTGGACACTCCGACACTTGTTGGATACTTATTATTGCAACAAACTTGCTATACATGCATAAAGCATTTGTTGAGTAGACTTAAAAGACACATAAATGACAATAATAATAGCTTTTGAGTTTGAAATACATCAAGCTAAGTTATTTAAGCATATAAATGCATCAACCCATTTACTTTGAATTTTCTTTTGGTATAAAAATGTATACGTTAATAAACGTGTCCTTGACGTTTCGTGTCCTAGATATTTAAAATAAGACGTATCGTTGTGTCTGTGTCGTGTTGTATCTGTATCTCGTATCCGTATATGTGCTTCTTAAGATTCCCATTAAGTTTACCTTTGTATTGGTTATGTGCTTTATGTTTTCAACTGATCCTTGTGAACCCATCTCTCTTCCTCATCCATACTTGCATTGCCTCTCATGTCTGTCATTATACTAAAAGGTATAGGGTTGGGCTTTAAGTTGCATGCTTTGATACCTTGTGACAATTTTTTTTTCCGCATATAGAGAAAGAGAGCGAGAGGCATGATGGGATAATGCCTCAAAGTGGTGCTAGCTCTGAAACAGACCTTGCTACTGTTTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAGTAAGTTTTGCTTAGTTTCACTCTCTCTCAAGACTTGCATACTATATTTCTTTTTGTCCACAGACGTTTCACATTATATATATATATATTTTAAGAAACAAAAAAAATTTGATTAACAAGAAGGCCACACAAAAAAACTTTAAGGCTGGGGTAGAGATGAGATAACCCCCACCAAAAATAGAAAGATAATGCAGAAAGGCCTTCCAATTCCTAATAATCATGGAGAGACTGTAATTACAAGAGAACTCCTTGTGAAAAGAAATCCACCAAGAAGCTAAAAGCTGAACACTATTAACAAAAGAATCAGCAGAATTACAATTATGTTTAAAAGATTCTAGCATTCCTTTTTTCCCTCTAAAATTCCATCCTGACAGAGATTCCATCAGCCAATCCTCGACTCTGTAGGGTAAGCACGTAGAAAAATTCATCTCCCTGAAGATAAGGTTCCAGCCTTCCTTGGCAAACATACAGTGCAACAGAAGGTGGTCAATGGTTTCCTCTGCCCTATTACGCAGTCAGCATGCCCTAAGATCCAACTGGAGAGCCTCTTCTGAAGTCTCTCAGCAGTATTAAGGCTTCGATACATCACTGACCAAAGAAAAAACTTCACTTTCTTGGAAAATTTTGGCTTCAGATTGCATTATACCCAATTGATGCTCCTTTGCCTCCTAGGAATGTTCTCAGAAAGGGCCAAAAAGGCAGATCTTGAGCTCTACAGGCCCCCGACCCCTCCAACCTCTATCCCAGAGCATCCTCATCCCTGTTCTCTTTTTATATTGATTTGTATGTGGAATTGTACATCTCAGCTTCACAATACTGCAAATGTTGGGAAAGGACAAGTCTTGTGCCCTTATTATGATCTGAATGTGGTTGTCCTTGATAAGGCGCAAGATATTTGGTGGGATCCTCAATCCTTGGTGAGACCTTTTCTAGAGGTAACCTATGAAAGAGAACTTCGCTGGAGGGAAATTGGTGACCTTTTTTTAGACAAAAAAACAGAAAAATGTACTCCAATCAAACTATTGTTTGAATTCCAGGAGCCTTAGGCCACATAAAAAGACCATATCTTTTGTTAGAAGGTAGCCAAGGCAAATATTCTATGGAATCCCTCCTAAGGTGAAGGGAATCAATCGGACAATGTTCCTGAAATTTTACATTTAGAAGCTCTATTAGGGAGACAAATTGCAGTCAATCTGAATATATCAGGTAGCCATATCTAGTATTGATTACCTGCTTCCTTAAGGCTTTTGATCTTTTAGGGAACCTCTAAAACCATTTGGCTAGGATGACTGTATTGTTAGTTCTAACATCAGCCACACCCAGATTAACAAGATAGAGTCTCTAGCAATCTTCCCCACCTTTTCGTATTAGAGATTGTTGTCTTATGATGGGAAGGTTCTATTTCACCTAGCTTTGTAGGATGAGGTCATGTTATCTTGCTTCCTAGTTTTTGTACTATTTTATAGCGAAAGAGAACTTTTGGAGGGTTTGAGAGGCATTGGAGAAAAGATTTGGCTCCTTGCCAGGTTTAATTCCTCTAGGCCCTATTTCTTTTGGAGTGGGCCATCTTTTGTCTTGTTAGGTCAACTATTGTTGAGCTCCTTTTTTAGGCTGTTGTTCCCCCAACCCCCCAAACGGACCTTTCCATGAGCTATGCTCGGATTGACGGTTTATGCATTTGTTCAAAGCTTGGTTTTTCCATGAAATGAAAATCTTTAATAATCTTTTCAATGCTTGCTGCTTGCTGCCAAGGAATTTGGTATACAAAAAACAGAGGTTCAGCGCATTTCTTCATATTTGGAAGTACATTCAGATTTTTAACCTTTTTTTTTTAAATCTCAACTGAAATATAGAACATAGTGCACTTGATTACTTGAATACTTTGCTTTATATTTCAATCAGCCAAAGGTTCAGCGCATTTTTCAAACTGCCAACTTAGGTGTTTATATATCCATCATTTCAAAGATTTTTGCTGAGTTTCCTTTCACTTCTTTGTTTTCTTCAAGCTGCCAACTTAAATTTTTTTGATTGAAGTGTTTGTTCTATGAGATTTTGCTAGCAATCAACTCCAATTGCTATGCTGAAATGCAAGGCTTCAATTTTCTCAAAACTGGATCTCTTGTTGCAGGTACCTTGTGGAGCAATCTCATGCCAAGAAATAATGAAACCCAAGCTTCCTCGTGCCTGCCTAGCTCATTTACCAATTTTGCCCACTTTTCACATCCATGCCAATATGTGTGCTATGCTACAACACTATAAACCTTTACACTGAACTTTGCTTGTACAGAGGAAAGCCAACTTCAATTTAAATGAGTGTGAATTTTGCAGTATTTTTATATATTGTTTATTTTGTAAGATATCTATCCTTTTATCTCGTACTACATGTCACCAACCCATAATCAGTTTCACTTTAAGGTATATACTCTTGACAAAGAAGAGGTGAGATGTTCTAATCTTTTCACCCCACTTGGTAGAAAAAATAAAATTCCTTAGTTGGAATGGAGCTCTATCAATTGGGCTATATCCTCTGCTATATCCTCTCGAGCTATGCTTGAGATTGTATGAAAAGGTTAGAAAGTAAGATATTTCTTCTTTCTTTTTGGCATGGCTAGGCCATTCAAACTTGATTTAGGAGGGTGTTGGTGATGCCATATTTTGAATTTTTTTTGGACACTAGAAGTATGGGAATTCGAACTATAGTCACTGACGCATCTATATATTGGTTGAGTTATATTTGTTCTGACAATTTATTTTGACTTAATTTAGTTTTATATTCTAATATATTTTTTGACTTCTCCAAGCTTTCGCCGAAGAATGAGACTATTATTGGAGAAAGTGTTTGGGGCACG

mRNA sequence

ATGCTTGAGGGGAAGTTATGGAACGAGTCCTATAATTTTTTGGGTTGTTCTTTTTATCATGGCAAGCTAGAGGGCTCCATTATCAATCTCCGTAGGTCTTATTGTGGGATGGTAGATGAAGAGAGCTATATTGGGGACATTAATGTTGAGTTTGACGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGATGCTCTACATGTGAAAGAGACGCAACAGAAGCCCATTGAAGACTCCAATTTAAGTCTAAAAGGTGAAGAGGACTATAACCAGCTACTCAAGCAGTATTATGAGCTTGAAGAGAAGAGACAGAAGGTTCTAGAACGGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCAACGCTGGTTCTGATGTTGGAACTCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCATTACCAAGCAATGCCCTCCTCTTTGCCCTCCAGTTGTCCTCAAAGTTCGTCCCTTGCTGATGGTGACATTATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATAGCTTCCATGAAGACTGTAAATAAAGAGAAAGAGAGCGAGAGGCATGATGGGATAATGCCTCAAAGTGGTGCTAGCTCTGAAACAGACCTTGCTACTGTTTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAGCCCCCGACCCCTCCAACCTCTATCCCAGAGCATCCTCATCCCTGTTCTCTTTTTATATTGATTTGTATGTGGAATTGTACATCTCAGCTTCACAATACTGCAAATGTTGGGAAAGGACAAGTCTTGTGCCCTTATTATGATCTGAATGTGGTTGTCCTTGATAAGGCGCAAGATATTTGGTGGGATCCTCAATCCTTGGTGAGACCTTTTCTAGAGCGAAAGAGAACTTTTGGAGGGTTTGAGAGGCATTGGAGAAAAGATTTGGCTCCTTGCCAGGTACCTTGTGGAGCAATCTCATGCCAAGAAATAATGAAACCCAAGCTTCCTCGTGCCTGCCTAGCTCATTTACCAATTTTGCCCACTTTTCACATCCATGCCAATATGTGTGCTATGCTACAACACTATAAACCTTTACACTGAACTTTGCTTGTACAGAGGAAAGCCAACTTCAATTTAAATGAGTGTGAATTTTGCAGTATTTTTATATATTGTTTATTTTGTAAGATATCTATCCTTTTATCTCGTACTACATGTCACCAACCCATAATCAGTTTCACTTTAAGGTATATACTCTTGACAAAGAAGAGGTGAGATGTTCTAATCTTTTCACCCCACTTGGTAGAAAAAATAAAATTCCTTAGTTGGAATGGAGCTCTATCAATTGGGCTATATCCTCTGCTATATCCTCTCGAGCTATGCTTGAGATTGTATGAAAAGGTTAGAAAGTAAGATATTTCTTCTTTCTTTTTGGCATGGCTAGGCCATTCAAACTTGATTTAGGAGGGTGTTGGTGATGCCATATTTTGAATTTTTTTTGGACACTAGAAGTATGGGAATTCGAACTATAGTCACTGACGCATCTATATATTGGTTGAGTTATATTTGTTCTGACAATTTATTTTGACTTAATTTAGTTTTATATTCTAATATATTTTTTGACTTCTCCAAGCTTTCGCCGAAGAATGAGACTATTATTGGAGAAAGTGTTTGGGGCACG

Coding sequence (CDS)

ATGCTTGAGGGGAAGTTATGGAACGAGTCCTATAATTTTTTGGGTTGTTCTTTTTATCATGGCAAGCTAGAGGGCTCCATTATCAATCTCCGTAGGTCTTATTGTGGGATGGTAGATGAAGAGAGCTATATTGGGGACATTAATGTTGAGTTTGACGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGATGCTCTACATGTGAAAGAGACGCAACAGAAGCCCATTGAAGACTCCAATTTAAGTCTAAAAGGTGAAGAGGACTATAACCAGCTACTCAAGCAGTATTATGAGCTTGAAGAGAAGAGACAGAAGGTTCTAGAACGGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCAACGCTGGTTCTGATGTTGGAACTCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCATTACCAAGCAATGCCCTCCTCTTTGCCCTCCAGTTGTCCTCAAAGTTCGTCCCTTGCTGATGGTGACATTATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATAGCTTCCATGAAGACTGTAAATAAAGAGAAAGAGAGCGAGAGGCATGATGGGATAATGCCTCAAAGTGGTGCTAGCTCTGAAACAGACCTTGCTACTGTTTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAGCCCCCGACCCCTCCAACCTCTATCCCAGAGCATCCTCATCCCTGTTCTCTTTTTATATTGATTTGTATGTGGAATTGTACATCTCAGCTTCACAATACTGCAAATGTTGGGAAAGGACAAGTCTTGTGCCCTTATTATGATCTGAATGTGGTTGTCCTTGATAAGGCGCAAGATATTTGGTGGGATCCTCAATCCTTGGTGAGACCTTTTCTAGAGCGAAAGAGAACTTTTGGAGGGTTTGAGAGGCATTGGAGAAAAGATTTGGCTCCTTGCCAGGTACCTTGTGGAGCAATCTCATGCCAAGAAATAATGAAACCCAAGCTTCCTCGTGCCTGCCTAGCTCATTTACCAATTTTGCCCACTTTTCACATCCATGCCAATATGTGTGCTATGCTACAACACTATAAACCTTTACACTGA

Protein sequence

MLEGKLWNESYNFLGCSFYHGKLEGSIINLRRSYCGMVDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHVKETQQKPIEDSNLSLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQEHPVSASQPSHYQAMPSSLPSSCPQSSSLADGDIIKTAMDSAARAIASMKTVNKEKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGKPPTPPTSIPEHPHPCSLFILICMWNCTSQLHNTANVGKGQVLCPYYDLNVVVLDKAQDIWWDPQSLVRPFLERKRTFGGFERHWRKDLAPCQVPCGAISCQEIMKPKLPRACLAHLPILPTFHIHANMCAMLQHYKPLH

Homology

[Close]

BLAST of ClCG10G001280 vs. NCBI nr
Match: XP_022965361.1 (uncharacterized protein LOC111465241 isoform X1 [Cucurbita maxima])

HSP 1 Score: 340.9 bits (873), Expect = 1.5e-89
Identity = 201/341 (58.94%), Postives = 217/341 (63.64%), Query Frame = 0


Query: 38  VDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHVKETQQKPIEDSNL 97
           VDEESYIG  +V F+VNET NTSEAKENISVEPCPISCTDFS AL+VKET+Q+ IEDSNL
Sbjct: 56  VDEESYIGANDVMFEVNETKNTSEAKENISVEPCPISCTDFSAALYVKETEQETIEDSNL 115

Query: 98  SLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQE 157
           +L+GE+ YN+LLKQYYELEEKRQKVLE+LYQCGAGGWNYQDV AGSD+G QWGTSAAYQE
Sbjct: 116 NLRGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQE 175

Query: 158 HPVSASQPSHYQAMPSSLPSSC-----PQSSSLADGDIIKTAMDSAARAIASMKTVNK-- 217
           HPVSASQPS  QA+PS  PSS      PQSSSLADGDIIKTAMDSAARAI+SMKTVNK  
Sbjct: 176 HPVSASQPSLNQAIPSYPPSSYPISAGPQSSSLADGDIIKTAMDSAARAISSMKTVNKVH 235

Query: 218 -EKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGKPPTPPTSIPEHPHPCSLFILI 277
            EKESE HDGIMPQ GASSETDL TVLNAWYSAGFYTGK                     
Sbjct: 236 IEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGK--------------------- 295

Query: 278 CMWNCTSQLHNTANVGKGQVLCPYYDLNVVVLDKAQDIWWDPQSLVRPFLERKRTFGGFE 337
                                                                       
Sbjct: 296 ------------------------------------------------------------ 308

Query: 338 RHWRKDLAPCQVPCGAISCQEIMKPKLPRACLAHLPILPTF 371
                  +  Q+PCGAIS QEIM  +LP ACL HL   P F
Sbjct: 356 -------SVLQIPCGAISGQEIMNTRLPHACLPHLTNFPHF 308

[Close]

BLAST of ClCG10G001280 vs. NCBI nr
Match: XP_022965362.1 (uncharacterized protein LOC111465241 isoform X2 [Cucurbita maxima])

HSP 1 Score: 339.3 bits (869), Expect = 4.2e-89
Identity = 181/219 (82.65%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 38  VDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHVKETQQKPIEDSNL 97
           VDEESYIG  +V F+VNET NTSEAKENISVEPCPISCTDFS AL+VKET+Q+ IEDSNL
Sbjct: 56  VDEESYIGANDVMFEVNETKNTSEAKENISVEPCPISCTDFSAALYVKETEQETIEDSNL 115

Query: 98  SLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQE 157
           +L+GE+ YN+LLKQYYELEEKRQKVLE+LYQCGAGGWNYQDV AGSD+G QWGTSAAYQE
Sbjct: 116 NLRGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQE 175

Query: 158 HPVSASQPSHYQAMPSSLPSSC-----PQSSSLADGDIIKTAMDSAARAIASMKTVNK-- 217
           HPVSASQPS  QA+PS  PSS      PQSSSLADGDIIKTAMDSAARAI+SMKTVNK  
Sbjct: 176 HPVSASQPSLNQAIPSYPPSSYPISAGPQSSSLADGDIIKTAMDSAARAISSMKTVNKVH 235

Query: 218 -EKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGK 249
            EKESE HDGIMPQ GASSETDL TVLNAWYSAGFYTGK
Sbjct: 236 IEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGK 274

[Close]

BLAST of ClCG10G001280 vs. NCBI nr
Match: XP_022923599.1 (uncharacterized protein LOC111431235 [Cucurbita moschata])

HSP 1 Score: 337.0 bits (863), Expect = 2.1e-88
Identity = 179/219 (81.74%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 38  VDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHVKETQQKPIEDSNL 97
           VDEESYIG  +V F+VNETTNTSEAKENISVEPCPISCTDFS AL+VKET+Q+ +EDSNL
Sbjct: 56  VDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNL 115

Query: 98  SLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQE 157
           +LKGE+ YN+LLKQYYELEEKRQKVLE+LYQCGAGGWNYQDV AGSD+G QWGTSAAYQE
Sbjct: 116 NLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQE 175

Query: 158 HPVSASQPSHYQAMPSSLPSSC-----PQSSSLADGDIIKTAMDSAARAIASMKTVNK-- 217
           HPVSASQPS  Q +PS  PSS      PQSSS ADGDIIKTAMDSAARAI+S+KTVNK  
Sbjct: 176 HPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVH 235

Query: 218 -EKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGK 249
            EKESE HDGIMPQ GASSETDL TVLNAWYSAGFYTGK
Sbjct: 236 IEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGK 274

[Close]

BLAST of ClCG10G001280 vs. NCBI nr
Match: XP_023551935.1 (uncharacterized protein LOC111809760 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 2.3e-87
Identity = 178/219 (81.28%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 38  VDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHVKETQQKPIEDSNL 97
           VDEESYIG  +V F+VNE TNTSEAKENISVEPCPISCTDFS AL+VKET+Q+ ++DSNL
Sbjct: 56  VDEESYIGANDVMFEVNEPTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVKDSNL 115

Query: 98  SLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQE 157
           +LKGE+ YN+LLKQYYELEEKRQKVLE+LYQCGAGGWNYQDV AGSD+G QWGTSAAYQE
Sbjct: 116 NLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQE 175

Query: 158 HPVSASQPSHYQAMPSSLPSSC-----PQSSSLADGDIIKTAMDSAARAIASMKTVNK-- 217
           HPVSASQPS  QA+PS  PSS      PQSSS ADGDIIKTAMDSAARAI+S+KTVNK  
Sbjct: 176 HPVSASQPSLNQAIPSYPPSSYPVSAGPQSSSRADGDIIKTAMDSAARAISSIKTVNKVH 235

Query: 218 -EKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGK 249
            EKESE H GIMPQSGASSETDL TVLNAWYSAGFYTGK
Sbjct: 236 IEKESEGHAGIMPQSGASSETDLTTVLNAWYSAGFYTGK 274

[Close]

BLAST of ClCG10G001280 vs. NCBI nr
Match: XP_023551933.1 (uncharacterized protein LOC111809760 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 2.3e-87
Identity = 178/219 (81.28%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 38  VDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHVKETQQKPIEDSNL 97
           VDEESYIG  +V F+VNE TNTSEAKENISVEPCPISCTDFS AL+VKET+Q+ ++DSNL
Sbjct: 56  VDEESYIGANDVMFEVNEPTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVKDSNL 115

Query: 98  SLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQE 157
           +LKGE+ YN+LLKQYYELEEKRQKVLE+LYQCGAGGWNYQDV AGSD+G QWGTSAAYQE
Sbjct: 116 NLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQE 175

Query: 158 HPVSASQPSHYQAMPSSLPSSC-----PQSSSLADGDIIKTAMDSAARAIASMKTVNK-- 217
           HPVSASQPS  QA+PS  PSS      PQSSS ADGDIIKTAMDSAARAI+S+KTVNK  
Sbjct: 176 HPVSASQPSLNQAIPSYPPSSYPVSAGPQSSSRADGDIIKTAMDSAARAISSIKTVNKVH 235

Query: 218 -EKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGK 249
            EKESE H GIMPQSGASSETDL TVLNAWYSAGFYTGK
Sbjct: 236 IEKESEGHAGIMPQSGASSETDLTTVLNAWYSAGFYTGK 274

[Close]

BLAST of ClCG10G001280 vs. ExPASy TrEMBL
Match: A0A6J1HLH3 (uncharacterized protein LOC111465241 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465241 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 7.0e-90
Identity = 201/341 (58.94%), Postives = 217/341 (63.64%), Query Frame = 0


Query: 38  VDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHVKETQQKPIEDSNL 97
           VDEESYIG  +V F+VNET NTSEAKENISVEPCPISCTDFS AL+VKET+Q+ IEDSNL
Sbjct: 56  VDEESYIGANDVMFEVNETKNTSEAKENISVEPCPISCTDFSAALYVKETEQETIEDSNL 115

Query: 98  SLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQE 157
           +L+GE+ YN+LLKQYYELEEKRQKVLE+LYQCGAGGWNYQDV AGSD+G QWGTSAAYQE
Sbjct: 116 NLRGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQE 175

Query: 158 HPVSASQPSHYQAMPSSLPSSC-----PQSSSLADGDIIKTAMDSAARAIASMKTVNK-- 217
           HPVSASQPS  QA+PS  PSS      PQSSSLADGDIIKTAMDSAARAI+SMKTVNK  
Sbjct: 176 HPVSASQPSLNQAIPSYPPSSYPISAGPQSSSLADGDIIKTAMDSAARAISSMKTVNKVH 235

Query: 218 -EKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGKPPTPPTSIPEHPHPCSLFILI 277
            EKESE HDGIMPQ GASSETDL TVLNAWYSAGFYTGK                     
Sbjct: 236 IEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGK--------------------- 295

Query: 278 CMWNCTSQLHNTANVGKGQVLCPYYDLNVVVLDKAQDIWWDPQSLVRPFLERKRTFGGFE 337
                                                                       
Sbjct: 296 ------------------------------------------------------------ 308

Query: 338 RHWRKDLAPCQVPCGAISCQEIMKPKLPRACLAHLPILPTF 371
                  +  Q+PCGAIS QEIM  +LP ACL HL   P F
Sbjct: 356 -------SVLQIPCGAISGQEIMNTRLPHACLPHLTNFPHF 308

[Close]

BLAST of ClCG10G001280 vs. ExPASy TrEMBL
Match: A0A6J1HK48 (uncharacterized protein LOC111465241 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465241 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89
Identity = 181/219 (82.65%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 38  VDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHVKETQQKPIEDSNL 97
           VDEESYIG  +V F+VNET NTSEAKENISVEPCPISCTDFS AL+VKET+Q+ IEDSNL
Sbjct: 56  VDEESYIGANDVMFEVNETKNTSEAKENISVEPCPISCTDFSAALYVKETEQETIEDSNL 115

Query: 98  SLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQE 157
           +L+GE+ YN+LLKQYYELEEKRQKVLE+LYQCGAGGWNYQDV AGSD+G QWGTSAAYQE
Sbjct: 116 NLRGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQE 175

Query: 158 HPVSASQPSHYQAMPSSLPSSC-----PQSSSLADGDIIKTAMDSAARAIASMKTVNK-- 217
           HPVSASQPS  QA+PS  PSS      PQSSSLADGDIIKTAMDSAARAI+SMKTVNK  
Sbjct: 176 HPVSASQPSLNQAIPSYPPSSYPISAGPQSSSLADGDIIKTAMDSAARAISSMKTVNKVH 235

Query: 218 -EKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGK 249
            EKESE HDGIMPQ GASSETDL TVLNAWYSAGFYTGK
Sbjct: 236 IEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGK 274

[Close]

BLAST of ClCG10G001280 vs. ExPASy TrEMBL
Match: A0A6J1E6W0 (uncharacterized protein LOC111431235 OS=Cucurbita moschata OX=3662 GN=LOC111431235 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.0e-88
Identity = 179/219 (81.74%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 38  VDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHVKETQQKPIEDSNL 97
           VDEESYIG  +V F+VNETTNTSEAKENISVEPCPISCTDFS AL+VKET+Q+ +EDSNL
Sbjct: 56  VDEESYIGANDVMFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNL 115

Query: 98  SLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQE 157
           +LKGE+ YN+LLKQYYELEEKRQKVLE+LYQCGAGGWNYQDV AGSD+G QWGTSAAYQE
Sbjct: 116 NLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQE 175

Query: 158 HPVSASQPSHYQAMPSSLPSSC-----PQSSSLADGDIIKTAMDSAARAIASMKTVNK-- 217
           HPVSASQPS  Q +PS  PSS      PQSSS ADGDIIKTAMDSAARAI+S+KTVNK  
Sbjct: 176 HPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVH 235

Query: 218 -EKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGK 249
            EKESE HDGIMPQ GASSETDL TVLNAWYSAGFYTGK
Sbjct: 236 IEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGK 274

[Close]

BLAST of ClCG10G001280 vs. ExPASy TrEMBL
Match: A0A5A7UCV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G001300 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 2.7e-81
Identity = 176/253 (69.57%), Postives = 200/253 (79.05%), Query Frame = 0


Query: 2   LEGKLWNESYNFLGCSFYHGKLEGSIINLRRSYCGMVDEESYIGDINVEFDVNETTNTSE 61
           L G L+ +S + +     H +L  S ++        VDEESY G+ NVEF+V ETT+T E
Sbjct: 21  LVGNLFIKSLSQIHLGSLHPRLNLSSLS--------VDEESYNGENNVEFEVEETTSTLE 80

Query: 62  AKENISVEPCPISCTDFSDALHVKETQQKPIEDSNLSLKGEEDYNQLLKQYYELEEKRQK 121
           AKENI VE   I+CTDFSDALHV+ETQ++P+EDS+L     E+YN LLKQYYELEEKRQK
Sbjct: 81  AKENIGVE-LSIACTDFSDALHVEETQEEPVEDSDL-----EEYNHLLKQYYELEEKRQK 140

Query: 122 VLERLYQCGAGGWNYQDVNAGSDVGTQWGTSAAYQEHPVSASQPSHYQAMPSSLPS---- 181
           VLE+LYQCGAGGWNYQDVNAGSDVGTQWGTSAA QEHPVSASQPSHY  +PS LP+    
Sbjct: 141 VLEQLYQCGAGGWNYQDVNAGSDVGTQWGTSAANQEHPVSASQPSHYPEIPSYLPTGYPI 200

Query: 182 -SCPQSSSLADGDIIKTAMDSAARAI-ASMKTVNKEKESERHDGIMPQSGASSETDLATV 241
            + PQSSSL D DIIKTAMDSA RAI +S+KTVNK KES+RHD IMPQSG SSETDLATV
Sbjct: 201 LAGPQSSSLVDDDIIKTAMDSATRAISSSLKTVNKVKESDRHDEIMPQSGDSSETDLATV 259

Query: 242 LNAWYSAGFYTGK 249
           LNAWYSAGFYTGK
Sbjct: 261 LNAWYSAGFYTGK 259

[Close]

BLAST of ClCG10G001280 vs. ExPASy TrEMBL
Match: A0A1S3BL18 (uncharacterized protein LOC103490751 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 4.6e-81
Identity = 173/230 (75.22%), Postives = 191/230 (83.04%), Query Frame = 0


Query: 25  GSIINLRRSYCGMVDEESYIGDINVEFDVNETTNTSEAKENISVEPCPISCTDFSDALHV 84
           G    L+RS    VDEESY G+ NVEF+V ETT+T EAKENI VE   I+CTDFSDALHV
Sbjct: 47  GKSDELKRS----VDEESYNGENNVEFEVEETTSTLEAKENIGVE-LSIACTDFSDALHV 106

Query: 85  KETQQKPIEDSNLSLKGEEDYNQLLKQYYELEEKRQKVLERLYQCGAGGWNYQDVNAGSD 144
           +ETQ++P+EDS+L     E+YN LLKQYYELEEKRQKVLE+LYQCGAGGWNYQDVNAGSD
Sbjct: 107 EETQEEPVEDSDL-----EEYNHLLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVNAGSD 166

Query: 145 VGTQWGTSAAYQEHPVSASQPSHYQAMPSSLPS-----SCPQSSSLADGDIIKTAMDSAA 204
           VGTQWGTSAA QEHPVSASQPSHY  +PS LP+     + PQSSSL D DIIKTAMDSA 
Sbjct: 167 VGTQWGTSAANQEHPVSASQPSHYPEIPSYLPTGYPILAGPQSSSLVDDDIIKTAMDSAT 226

Query: 205 RAI-ASMKTVNKEKESERHDGIMPQSGASSETDLATVLNAWYSAGFYTGK 249
           RAI +S+KTVNK KES+RHD IMPQSG SSETDLATVLNAWYSAGFYTGK
Sbjct: 227 RAISSSLKTVNKVKESDRHDEIMPQSGDSSETDLATVLNAWYSAGFYTGK 266

The following BLAST results are available for this feature:

BLAST of ClCG10G001280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965361.1	1.5e-89	58.94	uncharacterized protein LOC111465241 isoform X1 [Cucurbita maxima]	[more]
XP_022965362.1	4.2e-89	82.65	uncharacterized protein LOC111465241 isoform X2 [Cucurbita maxima]	[more]
XP_022923599.1	2.1e-88	81.74	uncharacterized protein LOC111431235 [Cucurbita moschata]	[more]
XP_023551935.1	2.3e-87	81.28	uncharacterized protein LOC111809760 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023551933.1	2.3e-87	81.28	uncharacterized protein LOC111809760 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG10G001280 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG10G001280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLH3	7.0e-90	58.94	uncharacterized protein LOC111465241 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HK48	2.0e-89	82.65	uncharacterized protein LOC111465241 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E6W0	1.0e-88	81.74	uncharacterized protein LOC111431235 OS=Cucurbita moschata OX=3662 GN=LOC1114312...	[more]
A0A5A7UCV0	2.7e-81	69.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BL18	4.6e-81	75.22	uncharacterized protein LOC103490751 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of ClCG10G001280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..227
IPR040424	Survival motor neuron-like protein 1	PANTHER	PTHR39267	SURVIVAL MOTOR NEURON-LIKE PROTEIN 1	coord: 38..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G001280.2	ClCG10G001280.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus