ClCG09G013470 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGATGTGCTAATCAAAGTAGTTGAGCTATTTGAGTGGTGTTCTGGTCAAAAGATTAATTGGGAAAAATCGACGATGTGTGGCATTAATATGGATAATGAAAAGTTGTTGTCTACTTTGTGTCTTCATTGTAAGGTGGAACATTAATATGGATAATGAAAAGTGGTTGTCTACTTTGTGTCTTCATTGTAAGGTGGAATCATTGCCTTTTTTACATCTTGGCCTTCTCTAGGTAATTATACCCCAAGAAAGTTTTGTTTTGGCAGCCTATTATTGACAAAATTCATAAGAAATTAGACCAATGGAAACGCTTCAATTTATCCCGTGGAGAGAGACTTAATTTGAAGTGTGGTCTAAAAGCATTTGGAGGCTTAAAATATAGAAACTTGGCACTATTGCCTAAATGGGGTGGAGATTATCACAGAAATCCGATTTTCTTTGGTGTAAAGTAGTTGTGGATTTTTAGTTAATAGAGGATTTTCCCCAAAACTTACTGTTCAAAATTGACCCTTATCCACTTGATAGCCAAACCTTTTGCTTATACTAGAAATCTTTTGCACTATCAATATAAAAATAAATCAAGTTAAACAGCCTGCTTGGTAGTAAAACTATGCCACAAGAAAGATTAGTAAAGCCGACATTTACAATTTGTACCTCCTCTAATAATATTGCAAATTGAGTGAATTTTCTTTTGAACCTGAAAAGAGTACAAAAAACTTCATTGAAGAGAGATCAAGTGTTAGCTTAGTACCTTCTGATAAATCTACTCTTGCCAATCACCACCATTGGCTTGTCCTGTCTGAGCCGTGGAATCTAAAGATGCTACATAAATGAAATAAAGGTGAGCAGATAGGGAAAATGTGTGTTGGAGGGATATAAGTGAACTGCAGCATAGAGATATTATACTCCCTAGTAATAATAAATTCAGCCTTCATTGAGAACAGTAAAAGTAAAAGGAGAATTGGGGCCAGAGTAGAAGGTTGAAAGGTTAAACAGAAAACGGGGGGCAGGATGATGAATAACACCACCACCGTCCACCACCACCACCAAAACCACCGGTACCAACAAGAACAAAAAAGCATAGAAACAGAAGGTAAAGTGCCAAAAGAAGCTAGGTTTCTTATGATTACTTTTGTAAAACAAGCTAAGCTTTTCAATCTTTCCTTCTGTATATGAGTTTAAACATCCATGAACTACTACTCTAGATAAAGAATCCTAGCAAGGGGCTCTTTCTTCATCAAGATGTTTTTAGTCGAGAAAGCATCAACCACCTCTTTTACTACTGTAGGTTTATTGCTAAGAGCCAGTCTTATACATTTGGATTATTCAACTTATCCTTATGCCTTCCCAATGACATTGAAGACTAGTTATATGAAGTTTGATAGGCCTCGAGTGACTCAAGTATATGTGCGCAAGCGTGTGAGAAGGATTGGAGGTAATACGTGAGAAGTGAGAACGTTTAGTTGAGTGGGCCCCTTGGGAATATTGTTAGTTAGAGGGGCCAAATGAGAGTATGTAAGCCGTTGAGGCTATGGGGGGAGAACTATCTTTTGACATTTTCTTGTATTTGGTTCTCTGAGTGAGAGCTCTTGAATTTTCACTCTGCTTGTTGATAAATGAATTGAGGTCAAGGCCTATCAATTTGGTATCAGAGCAATGATTCTCGGGCATGGTGGACAAGATGGAAAGCAGAGTCATCGTCGTTGA ATGTTGGATGTGCTAATCAAAGTAGTTGAGCTATTTGAGTGGTGTTCTGGTCAAAAGATTAATTGGGAAAAATCGACGATGTGTGGCATTAATATGGATAATGAAAAGTTGTTGTCTACTTTGTGTCTTCATTGTAAGCCTATTATTGACAAAATTCATAAGAAATTAGACCAATGGAAACGCTTCAATTTATCCCGTGGAGAGAGACTTAATTTGAAGTGTGGTCTAAAAGCATTTGGAGGCTTAAAATATAGAAACTTGGCACTATTGCCTAAATGGGGTGGAGATTATCACAGAAATCCGATTTTCTTTGGTGTAAAAGCAATGATTCTCGGGCATGGTGGACAAGATGGAAAGCAGAGTCATCGTCGTTGA ATGTTGGATGTGCTAATCAAAGTAGTTGAGCTATTTGAGTGGTGTTCTGGTCAAAAGATTAATTGGGAAAAATCGACGATGTGTGGCATTAATATGGATAATGAAAAGTTGTTGTCTACTTTGTGTCTTCATTGTAAGCCTATTATTGACAAAATTCATAAGAAATTAGACCAATGGAAACGCTTCAATTTATCCCGTGGAGAGAGACTTAATTTGAAGTGTGGTCTAAAAGCATTTGGAGGCTTAAAATATAGAAACTTGGCACTATTGCCTAAATGGGGTGGAGATTATCACAGAAATCCGATTTTCTTTGGTGTAAAAGCAATGATTCTCGGGCATGGTGGACAAGATGGAAAGCAGAGTCATCGTCGTTGA MLDVLIKVVELFEWCSGQKINWEKSTMCGINMDNEKLLSTLCLHCKPIIDKIHKKLDQWKRFNLSRGERLNLKCGLKAFGGLKYRNLALLPKWGGDYHRNPIFFGVKAMILGHGGQDGKQSHRR Homology
BLAST of ClCG09G013470 vs. NCBI nr
Match: XP_038880332.1 (uncharacterized protein LOC120071973 [Benincasa hispida]) HSP 1 Score: 86.3 bits (212), Expect = 2.1e-13 Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 0
BLAST of ClCG09G013470 vs. NCBI nr
Match: KAA0044242.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11 Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 0
BLAST of ClCG09G013470 vs. NCBI nr
Match: XP_038889274.1 (uncharacterized protein LOC120079176 [Benincasa hispida]) HSP 1 Score: 78.6 bits (192), Expect = 4.3e-11 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 0
BLAST of ClCG09G013470 vs. NCBI nr
Match: KAA0040202.1 (clip-associated protein [Cucumis melo var. makuwa] >TYK25927.1 clip-associated protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.5 bits (184), Expect = 3.6e-10 Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of ClCG09G013470 vs. NCBI nr
Match: TYK01565.1 (hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-09 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 0
BLAST of ClCG09G013470 vs. ExPASy TrEMBL
Match: A0A5A7TLN3 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G006040 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 7.2e-12 Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 0
BLAST of ClCG09G013470 vs. ExPASy TrEMBL
Match: A0A5A7T9S8 (Clip-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00210 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.8e-10 Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of ClCG09G013470 vs. ExPASy TrEMBL
Match: A0A5D3BQV1 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001420 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 5.1e-10 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 0
BLAST of ClCG09G013470 vs. ExPASy TrEMBL
Match: A0A5D3E2E9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00450 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.7e-09 Identity = 45/114 (39.47%), Postives = 57/114 (50.00%), Query Frame = 0
BLAST of ClCG09G013470 vs. ExPASy TrEMBL
Match: A0A5D3BF26 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00080 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 9.7e-09 Identity = 55/191 (28.80%), Postives = 71/191 (37.17%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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