ClCG09G012963 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCTCTCAAATGTTTAGTAATCTTCGGTATGGTTTTAACATTGGGTGGACAATGTTATGGGCAGCCTGGTGCAGAGGTTCCACTAAGTTCATGGAAGATTAACATTTTGAATGACATGAGTAAAGAGTCATTGTTTCTTCATTGCAAGTCTAAAGATGATGATTTGGGTGAACGAAACCTAGCTGTGGGACAACAATTTTCTTGGCATTTCAAGGAGAATTTGTGGCAGACAACACTCTATTGGTGTTATATGCACAATGCCAATAGTCATGCTTCATTTAATGTGTTTTGGCCTGAGAAATCAGGTTGGCTTGCTTTCAGATGTCAATTTAGAAACTGCATTTGGTCTGTTCGAAATGATGGGATTTACTTGAAGACCAACACCCATAATACATTTGAGCGCATACATATTTGGGAACCCGGGATGTGA ATGGAAGCTCTCAAATGTTTAGTAATCTTCGGTATGGTTTTAACATTGGGTGGACAATGTTATGGGCAGCCTGGTGCAGAGGTTCCACTAAGTTCATGGAAGATTAACATTTTGAATGACATGAGTAAAGAGTCATTGTTTCTTCATTGCAAGTCTAAAGATGATGATTTGGGTGAACGAAACCTAGCTGTGGGACAACAATTTTCTTGGCATTTCAAGGAGAATTTGTGGCAGACAACACTCTATTGGTGTTATATGCACAATGCCAATAGTCATGCTTCATTTAATGTGTTTTGGCCTGAGAAATCAGGTTGGCTTGCTTTCAGATGTCAATTTAGAAACTGCATTTGGTCTGTTCGAAATGATGGGATTTACTTGAAGACCAACACCCATAATACATTTGAGCGCATACATATTTGGGAACCCGGGATGTGA ATGGAAGCTCTCAAATGTTTAGTAATCTTCGGTATGGTTTTAACATTGGGTGGACAATGTTATGGGCAGCCTGGTGCAGAGGTTCCACTAAGTTCATGGAAGATTAACATTTTGAATGACATGAGTAAAGAGTCATTGTTTCTTCATTGCAAGTCTAAAGATGATGATTTGGGTGAACGAAACCTAGCTGTGGGACAACAATTTTCTTGGCATTTCAAGGAGAATTTGTGGCAGACAACACTCTATTGGTGTTATATGCACAATGCCAATAGTCATGCTTCATTTAATGTGTTTTGGCCTGAGAAATCAGGTTGGCTTGCTTTCAGATGTCAATTTAGAAACTGCATTTGGTCTGTTCGAAATGATGGGATTTACTTGAAGACCAACACCCATAATACATTTGAGCGCATACATATTTGGGAACCCGGGATGTGA MEALKCLVIFGMVLTLGGQCYGQPGAEVPLSSWKINILNDMSKESLFLHCKSKDDDLGERNLAVGQQFSWHFKENLWQTTLYWCYMHNANSHASFNVFWPEKSGWLAFRCQFRNCIWSVRNDGIYLKTNTHNTFERIHIWEPGM Homology
BLAST of ClCG09G012963 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus]) HSP 1 Score: 265.0 bits (676), Expect = 3.8e-67 Identity = 113/144 (78.47%), Postives = 128/144 (88.89%), Query Frame = 0
BLAST of ClCG09G012963 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 265.0 bits (676), Expect = 3.8e-67 Identity = 113/144 (78.47%), Postives = 128/144 (88.89%), Query Frame = 0
BLAST of ClCG09G012963 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66 Identity = 116/144 (80.56%), Postives = 126/144 (87.50%), Query Frame = 0
BLAST of ClCG09G012963 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus]) HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66 Identity = 116/144 (80.56%), Postives = 126/144 (87.50%), Query Frame = 0
BLAST of ClCG09G012963 vs. NCBI nr
Match: XP_007200064.2 (uncharacterized protein LOC18766253 [Prunus persica] >ONH93016.1 hypothetical protein PRUPE_8G208300 [Prunus persica]) HSP 1 Score: 147.9 bits (372), Expect = 6.7e-32 Identity = 68/146 (46.58%), Postives = 94/146 (64.38%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.8e-25 Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22 Identity = 43/98 (43.88%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12 Identity = 35/117 (29.91%), Postives = 57/117 (48.72%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.4e-10 Identity = 38/138 (27.54%), Postives = 68/138 (49.28%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy Swiss-Prot
Match: B3H730 (S-protein homolog 18 OS=Arabidopsis thaliana OX=3702 GN=SPH18 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09 Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy TrEMBL
Match: A0A251N118 (S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208300 PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 3.3e-32 Identity = 68/146 (46.58%), Postives = 94/146 (64.38%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy TrEMBL
Match: A0A5E4EJG4 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 4.2e-32 Identity = 68/146 (46.58%), Postives = 94/146 (64.38%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy TrEMBL
Match: A0A6J5Y6Z2 (S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51616 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 9.5e-32 Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy TrEMBL
Match: M5VWE5 (S-protein homolog (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022213mg PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 2.1e-31 Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 0
BLAST of ClCG09G012963 vs. ExPASy TrEMBL
Match: A0A6J1L0E8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 8.0e-31 Identity = 56/116 (48.28%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of ClCG09G012963 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 115.5 bits (288), Expect = 3.4e-26 Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 0
BLAST of ClCG09G012963 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 107.5 bits (267), Expect = 9.4e-24 Identity = 43/98 (43.88%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of ClCG09G012963 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13 Identity = 35/117 (29.91%), Postives = 57/117 (48.72%), Query Frame = 0
BLAST of ClCG09G012963 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13 Identity = 41/120 (34.17%), Postives = 60/120 (50.00%), Query Frame = 0
BLAST of ClCG09G012963 vs. TAIR 10
Match: AT1G28306.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 65.5 bits (158), Expect = 4.1e-11 Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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