
ClCG09G011110 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGATGATTACACGTGGACATGGGACCCACGGTTTACCTTGTGGAGTTAGGTTCCAATAATCTCAAGGAACACTTTTTTTTTTTTTAAAAAAAATTATTATTTATTTTTTCATTTTAATTTTTTTCCTTTTTAGGGATTTTCAGTCCAATTTGCTCAGAGCCAAATTCCGTCGTTCTGATTTCCGATTCCGATTGATCGACGAACGTTGGTCGCCGGCGGTGGGGGATTTGTATCGTCTTCCATTTGAATTCAATCAATCCCCATACAATTCCACAGCCGCCCGCTTTTCCGAACGGGTAAATTTCACTTCCTTTTTATTATGATTTCTGTATCGTCTGGTAGTACGATTAATTTCTTCTTCAGGGCAATTTTCGGGGTGTTTGTTGGTTTGTTCCATGGTATCTGTTGATTTCAGGGTCTGATTATATGATTTTTACCTCAATTCCCCGTTTTTGTTTGTCCTTGGTTTGTGTATGGACGGAAATGTTTGATCCTTCTGTTGATCAATTTGTGGGTCTCTTCTAGATCATTAGAAGGGTTCAGCTCTACCTGGATTAGCTTTAATCTAGCTTTTTTCTTCTGCTCGGACGAACTAGCTGGTTATTTAATGATTGACTATGTGAAACAACTAATTTTTTTGATTTTTGTGGTGTTTGGATTGAAGGTCAATGGCGTATACATTGGAATCGTGGACGAAGGAATACAATGAAGCTTTGAAACTGTCTGAAGATATCAATGGCATGATTTCTGAGAGAAGTTCACTTGCTGCATCTGGACCGGAAGCTCAGCGTCATGGCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATGTAAGCCATGTTACTTATGATTTCCCTTTCCCACAGTTTCCAGATAGACAGGGACATGAATATCAACATTTATGTGTAATTCATTGTATTATAAGTCTGAAAATGATGCTTCCAATATGGGATTTGCTGAAATTTATATCTGTATATGTGGTGTGGCTATCTAACTCTCTACTTTTGTGGTGACTTTTTTGGAAATTGGGCGTTTGTATGTTTTGGATAGTATATTATATCAGTATCTTGTGGTTTGCAGACCAGAGAAAGAGATGAATCGCCGCAGGGACATGATTGCAAATTTGAGATCAAAAGCTAAGCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGGGATAGCTTACTTGGTCCAGAAATAAAGCCAGCTGATGTCATGAACAGAACAGAAGGCTTGGACAACCGAGGCCTAGTTGGTTTTCAACGACAAATTATGAGAGGCAGGTTTATTTGTTTTAAGTTTTTAACTCACAGGAAAGAATTTCACAACTATGAATCTCTGTTAATGTGAAAATATGTTTTTTGGAGCAGAGCAAGATGAAGGCCTTGAGAAACTGGAAGGGACTATAATTAGCACAAAACATATTGCATTAGCCGTCAATGAAGAACTTAACCTTCACACGAGACTTATTGTATGTCTTTTGATCATTGTTATGTTAATTCATTTGTTGACTTACTTGATCACTGATCCAATGCTTCTCATTAAGTTAATTCTTAAAATCGTAAGCTTATTTTCAAGTGTCTTTTATTTAACTCTGTTCAATGGTGCAGGATGATTTGGATGAACATGTCGATGTTACAGATTCCCGATTACGGGTATGAATCTCTTGTTCTAATTCTTTTCTTACACGATGATTGTTTTTGTTATGTACATCTGTTGTGTACTATAACTATGAGAGGGTTCACCATGTTGGAAAAGATAGAAAACCTTTTGTGTACGACATTTGCAGAGTGAAAAAGAAAGGGGCAATAGATAGTCATCTTCCCTCCCAAATTTGCAAAATTGAAAGATTATACTTCGAGAGTTAGATGGTAAATGTTTTTTTTTTTTTTTTTAAAAGGAAACAATCTCTTTCCTAGTGTCCAGGATTGAATCTCCTAACTGGAGGAGATTATATTTCGAGAGTTAGATGGTAAATGTTACACGTGAAAATTTATGGCTCATCCCCTGGTGTCCAGGATTGAATCTCCTAACTGGAGGATCAATCTTGTTTTTGGAAATCTCAACAGTTCAAACTTCCTCGAAATTCTAGATTATCATTATTGTGCATTTTCCCAATAAGATTGTTCAAATTGGACTGCACTCCTCTTGATAAATCCCAATCCTTCTGTTTGGAACGCCTTTGGGAATGAGAATGAACTTGGTAACAAATGTTAGGACTATAGCATCATTTCATATATTGAAGTCTGTGGATCCGTTTCTTTTGCTTTCCTTTTTCGATTGTTTAAATTTATATGGGCAGTGTCTTTACTCATTGCATCAATCTATGAACTTGTGCATTTGATTAAAACAGCGAGTGCAGAAGAGGCTGGCAATACTGAACAAGCGGACCAAGGGTGGTTGCACTTGCATGTCAATGATTTTATCAGTTGTTGGGATTGTCGTTCTTATCGCTGTCATATGGCTACTGGTCAAGTATTTGTAATTCACCATGTCTTGGTGTGAATTGGCTTAAACATAACCTTGTGGTGTAAGATTCTGATATCTGCTGTTGTTCTTTGTGAATTTGTGTTTTCTTTTTCTTTCTTTCACTTAACGTGGAGTGGAGTCCATGAGATTGAGGCGATTTTGGACTTGTATATTTTCAGTTTAAGCAACTATTGTGATTGCCAACTATTCATCCTCTTCTTGCTACAAAGTATTAGTGTTCTAAGATTAAGTTAAAGTTTCAATGCTCAC ATGATGATGATTACACGTGGACATGGGACCCACGGTTTACCTTGTGGAGTTAGGGATTTTCAGTCCAATTTGCTCAGAGCCAAATTCCGTCGTTCTGATTTCCGATTCCGATTGATCGACGAACGTTGGTCGCCGGCGGTGGGGGATTTGTATCGTCTTCCATTTGAATTCAATCAATCCCCATACAATTCCACAGCCGCCCGCTTTTCCGAACGGGGCAATTTTCGGGGTGTTTGTTGGTTTGTTCCATGGTCAATGGCGTATACATTGGAATCGTGGACGAAGGAATACAATGAAGCTTTGAAACTGTCTGAAGATATCAATGGCATGATTTCTGAGAGAAGTTCACTTGCTGCATCTGGACCGGAAGCTCAGCGTCATGGCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCAGAGAAAGAGATGAATCGCCGCAGGGACATGATTGCAAATTTGAGATCAAAAGCTAAGCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGGGATAGCTTACTTGGTCCAGAAATAAAGCCAGCTGATGTCATGAACAGAACAGAAGGCTTGGACAACCGAGGCCTAGTTGAGCAAGATGAAGGCCTTGAGAAACTGGAAGGGACTATAATTAGCACAAAACATATTGCATTAGCCGTCAATGAAGAACTTAACCTTCACACGAGACTTATTGATGATTTGGATGAACATGTCGATGTTACAGATTCCCGATTACGGCGAGTGCAGAAGAGGCTGGCAATACTGAACAAGCGGACCAAGGGTGGTTGCACTTGCATGTCAATGATTTTATCAGTTGTTGGGATTGTCGTTCTTATCGCTGTCATATGGCTACTGGTCAAGTATTTGTAATTCACCATGTCTTGGTGTGAATTGGCTTAAACATAACCTTGTGGTGTAAGATTCTGATATCTGCTGTTGTTCTTTGTGAATTTGTGTTTTCTTTTTCTTTCTTTCACTTAACGTGGAGTGGAGTCCATGAGATTGAGGCGATTTTGGACTTGTATATTTTCAGTTTAAGCAACTATTGTGATTGCCAACTATTCATCCTCTTCTTGCTACAAAGTATTAGTGTTCTAAGATTAAGTTAAAGTTTCAATGCTCAC ATGATGATGATTACACGTGGACATGGGACCCACGGTTTACCTTGTGGAGTTAGGGATTTTCAGTCCAATTTGCTCAGAGCCAAATTCCGTCGTTCTGATTTCCGATTCCGATTGATCGACGAACGTTGGTCGCCGGCGGTGGGGGATTTGTATCGTCTTCCATTTGAATTCAATCAATCCCCATACAATTCCACAGCCGCCCGCTTTTCCGAACGGGGCAATTTTCGGGGTGTTTGTTGGTTTGTTCCATGGTCAATGGCGTATACATTGGAATCGTGGACGAAGGAATACAATGAAGCTTTGAAACTGTCTGAAGATATCAATGGCATGATTTCTGAGAGAAGTTCACTTGCTGCATCTGGACCGGAAGCTCAGCGTCATGGCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCAGAGAAAGAGATGAATCGCCGCAGGGACATGATTGCAAATTTGAGATCAAAAGCTAAGCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGGGATAGCTTACTTGGTCCAGAAATAAAGCCAGCTGATGTCATGAACAGAACAGAAGGCTTGGACAACCGAGGCCTAGTTGAGCAAGATGAAGGCCTTGAGAAACTGGAAGGGACTATAATTAGCACAAAACATATTGCATTAGCCGTCAATGAAGAACTTAACCTTCACACGAGACTTATTGATGATTTGGATGAACATGTCGATGTTACAGATTCCCGATTACGGCGAGTGCAGAAGAGGCTGGCAATACTGAACAAGCGGACCAAGGGTGGTTGCACTTGCATGTCAATGATTTTATCAGTTGTTGGGATTGTCGTTCTTATCGCTGTCATATGGCTACTGGTCAAGTATTTGTAA MMMITRGHGTHGLPCGVRDFQSNLLRAKFRRSDFRFRLIDERWSPAVGDLYRLPFEFNQSPYNSTAARFSERGNFRGVCWFVPWSMAYTLESWTKEYNEALKLSEDINGMISERSSLAASGPEAQRHGSAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKAKQMASTLNMSNFANRDSLLGPEIKPADVMNRTEGLDNRGLVEQDEGLEKLEGTIISTKHIALAVNEELNLHTRLIDDLDEHVDVTDSRLRRVQKRLAILNKRTKGGCTCMSMILSVVGIVVLIAVIWLLVKYL Homology
BLAST of ClCG09G011110 vs. NCBI nr
Match: XP_038896866.1 (syntaxin-51-like [Benincasa hispida]) HSP 1 Score: 412.9 bits (1060), Expect = 2.4e-111 Identity = 221/233 (94.85%), Postives = 225/233 (96.57%), Query Frame = 0
BLAST of ClCG09G011110 vs. NCBI nr
Match: XP_008447706.1 (PREDICTED: syntaxin-51-like [Cucumis melo] >TYK23049.1 syntaxin-51-like [Cucumis melo var. makuwa]) HSP 1 Score: 409.8 bits (1052), Expect = 2.0e-110 Identity = 221/233 (94.85%), Postives = 222/233 (95.28%), Query Frame = 0
BLAST of ClCG09G011110 vs. NCBI nr
Match: KAA0048124.1 (syntaxin-51-like [Cucumis melo var. makuwa]) HSP 1 Score: 407.9 bits (1047), Expect = 7.7e-110 Identity = 221/238 (92.86%), Postives = 222/238 (93.28%), Query Frame = 0
BLAST of ClCG09G011110 vs. NCBI nr
Match: XP_004151390.1 (syntaxin-51 [Cucumis sativus] >KGN43995.1 hypothetical protein Csa_015753 [Cucumis sativus]) HSP 1 Score: 406.4 bits (1043), Expect = 2.3e-109 Identity = 219/233 (93.99%), Postives = 222/233 (95.28%), Query Frame = 0
BLAST of ClCG09G011110 vs. NCBI nr
Match: XP_022940643.1 (syntaxin-51-like [Cucurbita moschata] >XP_022940645.1 syntaxin-51-like [Cucurbita moschata] >XP_022981595.1 syntaxin-51-like [Cucurbita maxima] >XP_022981596.1 syntaxin-51-like [Cucurbita maxima] >KAG7037355.1 Syntaxin-51 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 401.4 bits (1030), Expect = 7.3e-108 Identity = 215/233 (92.27%), Postives = 220/233 (94.42%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy Swiss-Prot
Match: Q9SA23 (Syntaxin-51 OS=Arabidopsis thaliana OX=3702 GN=SYP51 PE=1 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 1.2e-81 Identity = 162/233 (69.53%), Postives = 194/233 (83.26%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy Swiss-Prot
Match: Q94KK7 (Syntaxin-52 OS=Arabidopsis thaliana OX=3702 GN=SYP52 PE=1 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.3e-80 Identity = 160/233 (68.67%), Postives = 189/233 (81.12%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy Swiss-Prot
Match: Q54IX6 (Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.5e-10 Identity = 59/232 (25.43%), Postives = 111/232 (47.84%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy Swiss-Prot
Match: O88983 (Syntaxin-8 OS=Mus musculus OX=10090 GN=Stx8 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07 Identity = 56/237 (23.63%), Postives = 109/237 (45.99%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy Swiss-Prot
Match: Q9Z2Q7 (Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07 Identity = 55/230 (23.91%), Postives = 110/230 (47.83%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy TrEMBL
Match: A0A5D3DIH2 (Syntaxin-51-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00130 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 9.9e-111 Identity = 221/233 (94.85%), Postives = 222/233 (95.28%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy TrEMBL
Match: A0A1S3BHF8 (syntaxin-51-like OS=Cucumis melo OX=3656 GN=LOC103490119 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 9.9e-111 Identity = 221/233 (94.85%), Postives = 222/233 (95.28%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy TrEMBL
Match: A0A5A7TYL4 (Syntaxin-51-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00070 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 3.8e-110 Identity = 221/238 (92.86%), Postives = 222/238 (93.28%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy TrEMBL
Match: A0A0A0K2Y5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G084710 PE=4 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 1.1e-109 Identity = 219/233 (93.99%), Postives = 222/233 (95.28%), Query Frame = 0
BLAST of ClCG09G011110 vs. ExPASy TrEMBL
Match: A0A6J1IX00 (syntaxin-51-like OS=Cucurbita maxima OX=3661 GN=LOC111480666 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.5e-108 Identity = 215/233 (92.27%), Postives = 220/233 (94.42%), Query Frame = 0
BLAST of ClCG09G011110 vs. TAIR 10
Match: AT1G16240.1 (syntaxin of plants 51 ) HSP 1 Score: 304.7 bits (779), Expect = 8.6e-83 Identity = 162/233 (69.53%), Postives = 194/233 (83.26%), Query Frame = 0
BLAST of ClCG09G011110 vs. TAIR 10
Match: AT1G16240.2 (syntaxin of plants 51 ) HSP 1 Score: 304.7 bits (779), Expect = 8.6e-83 Identity = 162/233 (69.53%), Postives = 194/233 (83.26%), Query Frame = 0
BLAST of ClCG09G011110 vs. TAIR 10
Match: AT1G79590.1 (syntaxin of plants 52 ) HSP 1 Score: 300.4 bits (768), Expect = 1.6e-81 Identity = 160/233 (68.67%), Postives = 189/233 (81.12%), Query Frame = 0
BLAST of ClCG09G011110 vs. TAIR 10
Match: AT1G79590.2 (syntaxin of plants 52 ) HSP 1 Score: 300.4 bits (768), Expect = 1.6e-81 Identity = 160/233 (68.67%), Postives = 189/233 (81.12%), Query Frame = 0
BLAST of ClCG09G011110 vs. TAIR 10
Match: AT1G16240.3 (syntaxin of plants 51 ) HSP 1 Score: 253.8 bits (647), Expect = 1.7e-67 Identity = 134/194 (69.07%), Postives = 160/194 (82.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|