ClCG09G005350 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGCGTCTCAGTGAGCGTTTACAATGGCCTGCGGCGCTATTTGAGGAGGAAAAGCTACCGGAAACTGGCTGGATCGGTGGGCCGAAGGACGGAGACAGTGCAACTTGGGGCCACTGGAGGAAGGCGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGGTTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGGGATTCCTATGTCAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCATCAGCGGCGGGGGCGGCGGCAGCGATGAGATCTGGGGCGGCGCCGGAAGGAGCACGCTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTACCGCCGCCGGAACCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA ATGGAAGGCGTCTCAGTGAGCGTTTACAATGGCCTGCGGCGCTATTTGAGGAGGAAAAGCTACCGGAAACTGGCTGGATCGGTGGGCCGAAGGACGGAGACAGTGCAACTTGGGGCCACTGGAGGAAGGCGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGGTTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGGGATTCCTATGTCAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCATCAGCGGCGGGGGCGGCGGCAGCGATGAGATCTGGGGCGGCGCCGGAAGGAGCACGCTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTACCGCCGCCGGAACCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA ATGGAAGGCGTCTCAGTGAGCGTTTACAATGGCCTGCGGCGCTATTTGAGGAGGAAAAGCTACCGGAAACTGGCTGGATCGGTGGGCCGAAGGACGGAGACAGTGCAACTTGGGGCCACTGGAGGAAGGCGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGGTTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGGGATTCCTATGTCAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCATCAGCGGCGGGGGCGGCGGCAGCGATGAGATCTGGGGCGGCGCCGGAAGGAGCACGCTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTACCGCCGCCGGAACCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA MEGVSVSVYNGLRRYLRRKSYRKLAGSVGRRTETVQLGATGGRRRRRRIWRIKISPKLRLFRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGISGGGGGSDEIWGGAGRSTLKEYDEKMITEIYKSLVVAQGRLPPPEPVRPSWVGGRLPTVAE Homology
BLAST of ClCG09G005350 vs. NCBI nr
Match: KAA0046671.1 (uncharacterized protein E6C27_scaffold427G00380 [Cucumis melo var. makuwa] >TYK18206.1 uncharacterized protein E5676_scaffold411G001450 [Cucumis melo var. makuwa]) HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69 Identity = 143/156 (91.67%), Postives = 144/156 (92.31%), Query Frame = 0
BLAST of ClCG09G005350 vs. NCBI nr
Match: XP_016901040.1 (PREDICTED: uncharacterized protein LOC103492779 [Cucumis melo]) HSP 1 Score: 271.6 bits (693), Expect = 4.4e-69 Identity = 142/156 (91.03%), Postives = 143/156 (91.67%), Query Frame = 0
BLAST of ClCG09G005350 vs. NCBI nr
Match: XP_031744261.1 (uncharacterized protein LOC101203703 [Cucumis sativus] >KGN44989.1 hypothetical protein Csa_016672 [Cucumis sativus]) HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69 Identity = 142/156 (91.03%), Postives = 144/156 (92.31%), Query Frame = 0
BLAST of ClCG09G005350 vs. NCBI nr
Match: XP_038897064.1 (uncharacterized protein LOC120085238 isoform X1 [Benincasa hispida]) HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69 Identity = 144/156 (92.31%), Postives = 146/156 (93.59%), Query Frame = 0
BLAST of ClCG09G005350 vs. NCBI nr
Match: XP_038897065.1 (uncharacterized protein LOC120085238 isoform X2 [Benincasa hispida]) HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69 Identity = 144/156 (92.31%), Postives = 146/156 (93.59%), Query Frame = 0
BLAST of ClCG09G005350 vs. ExPASy TrEMBL
Match: A0A5A7TZB4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001450 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 5.6e-70 Identity = 143/156 (91.67%), Postives = 144/156 (92.31%), Query Frame = 0
BLAST of ClCG09G005350 vs. ExPASy TrEMBL
Match: A0A1S4DZ96 (uncharacterized protein LOC103492779 OS=Cucumis melo OX=3656 GN=LOC103492779 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69 Identity = 142/156 (91.03%), Postives = 143/156 (91.67%), Query Frame = 0
BLAST of ClCG09G005350 vs. ExPASy TrEMBL
Match: A0A0A0K7Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405950 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 3.6e-69 Identity = 142/156 (91.03%), Postives = 144/156 (92.31%), Query Frame = 0
BLAST of ClCG09G005350 vs. ExPASy TrEMBL
Match: A0A6J1GPC4 (uncharacterized protein LOC111456226 OS=Cucurbita moschata OX=3662 GN=LOC111456226 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.5e-62 Identity = 136/157 (86.62%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of ClCG09G005350 vs. ExPASy TrEMBL
Match: A0A6J1JLB7 (uncharacterized protein LOC111487968 OS=Cucurbita maxima OX=3661 GN=LOC111487968 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 5.6e-62 Identity = 135/157 (85.99%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of ClCG09G005350 vs. TAIR 10
Match: AT2G47485.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 93.6 bits (231), Expect = 1.5e-19 Identity = 61/133 (45.86%), Postives = 80/133 (60.15%), Query Frame = 0
BLAST of ClCG09G005350 vs. TAIR 10
Match: AT3G62650.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19 Identity = 64/130 (49.23%), Postives = 81/130 (62.31%), Query Frame = 0
BLAST of ClCG09G005350 vs. TAIR 10
Match: AT3G62650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19 Identity = 64/130 (49.23%), Postives = 81/130 (62.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|