ClCG09G004180 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTATTTCACTTCAACTACAAAAACACACTTACATATATAAGCTAAGCTAAGAGATCATATACCACACATTATTATCTAACACACACCACCTCAATCCAAACATTATTGTTATTATTATTTCTCTCTTCCAACAACAAATAATATATATATATATAGAAACAATAACATAAGCCATATATACATGAGGAAGCCAGCTGATTCCACCGCCGCCAACATCCGGCTGAGGAAAGGCCTTTGGTCGCCGGAGGAGGACGAGAAGCTGATGAGATACATGCTCTCCAATGGCCAAGGCTGCTGGACCGACATTGCCCGAAATGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATTAACTATCTCCGCCCTGACCTTAAACGTGGAGCTTTCTCTCCTCAAGAAGAACAACTCATTCTCCATCTGCATTCTCTTCTGGGCAATAGGTAATAAATTCAAAACCAATTAGCCATTTAAATTCAAGATTTATTGAGAATGAAAGAGATTACAATTAGCCATTTAAAATTATAAAAATTAAAATGGAACAAAGTTTAAAGTAAGCAACCAAAATAGTATTTTAATCTAATTCTCTTATATATATACTTCTATTTTTATTCTATTTTGGTTTCTATATTTTTTAAATTAGAGTTTGATGAATTTTGATTAATTAGTTATTATGAGTTTAGTTGTTGGTGTTGAAGTTTTCAATTTTTTTTAATCTAATGAAAATTATTGTTGGTACTTTTTTTCTAAACACCTAACTGCAAATATAGAAATAGAGCTATTCTCTCTGCCATTTTCTCTTTTCTCATAATATGAATAAAATGATCTTCCTCTCTCTACTTTGTTTCCTCCTCTTTAATATATATATATATATTCCTTTAGAATATTGATAATCATAAAACATTATATTTTTTTCATGTTCATTCATGCATTTTATGAATCAAAGTAAAAAGTAAGGAGAAATTGGGTAGTGTTATGCTTTTATTTAAGCTTTAATATAAAAGTGGCCAAATTAAACATTAGAAAAGCTTGAGTAGGGTCTATAGAGAAGATATTGATTATGATCAAAGTCAAATGTAGGCCATACTTGTGGTTAATAGGTTTTGAGTAACTCATTGAGTGCAAAATAATTAATACTACGAATCCACATCACTTGATCATATTAGATGAAAACCAAAGACATTTATTTCATTGATGTCAATTAATCATTTAGTTGTTGGATACATTATTTTCTATACATTAGAATTTACGAATTGATTTACTAAATAGTTTTTTTTTTAAGTTTAGTTTTTTTTAGAATTAAGCTTAATACTATTTCTCTCTATTGATTTATTTATTATTTCTTTTCTGTTATCTACTTTTGAAGAATTTTTTAAAAACATCAAGTTAAGTTTTGAAAATTATAAAGTAGTTTTTATTTTTGGAATTTGACTAAAAAATTCATGTGTTTAGTTAGGGAAAATAAAAACTATGGTAAAAAAGTTGTAAGAAAACAAACAAACTTTTAAAAATAAAAAACAAAAAATTAAGTTTGGTTGGCAATCCGTTTGGTTTTTTGTTTTTTAAAATTAAGCTTATAAATATCAATTTCATTTGTTTGGTCTTATGTTTTGTAGTCTAAATTTTAAGAGTGTGTTTAAAATCTAAACTAAAATTTGAAAATTGAGGACCCATTTACTAATTATTTGATTTTTGTTTTTTAAAAACTGAATTTATAAATATTATACTTTCAACTTTTTGATTTGTTTTGTTATTTCAAAAGTCTAAGATAATTTTTAAAAACTTCATTTTGAATTCTGGAATTTAGAATTCAAATGTGAAAGATAATAATTAGAGTAAGTCAGTGGTAACAAAAAAAAATTATAATTTTCCAAAATCAAAACCCTAATATTTATTAAAATTGGTCTAAAAACGTAGTTTTTTAAGTTTTTTTTTTTTTTTTTAAAAAATTTAGTTAAAAATTCAACTATTTACATAAAAAATATTAAAAAATGGTTAGAAAACAAACAAAATCTTTAAAAACTATCAAATTATTGTTACCAAACCGTATCTAAATACTTTATTTAATTGAGAAATTATTGTAAATAGAAAAAATATCAAACTATCTACAAATCTAGAAAAAAAATTTAGCGATAGACTTTTGTTGCTCTTTTTATCACCAAACGATAGAAGCCTATTACAGTCTATCAACTAGTGATAGAAATATATCGCAGTCTATCGTTGAAATTTTTATATATTTGTAAATAATTTTGCTTATTTTTCTATATTTAAAAATAACCCATTATAATTTTGTAAAAATTTAAAGGTGTCTTGAAATAAATTACAAAGTTTACCATTGTATTATTTTTATAATTTAGCCAAAATTTTACTAAAATTAAAATTTGATAATTTATCAGGTGGTCTCAAATAGCATCACGTCTACCTGGACGAACGGATAATGAAATAAAGAATTTCTGGAACTCCACGTTGAAAAAGAGAATGAAGAATCGTAATTACAATATTACCCCTTCTCCAAACTTAAGCCAATCATCCGAACCTAGAAGTAACAGCAGCTTCGGAGAGCACCTAAGTTCTTCCGAACCATTATTATTCCCTACATTATTGGACGACAACCACCAATTATATAACACGTTTGGTGGTGGTGGTGCAATGGAAGAGGGGTATTTTGGGGATTACACCACAACAATATTAGAGCCTAAGGAATTTGTGAAGGACTTTTATGACTTTTCTCACCTTCCTCCACTTGGAAATGGAGACATTATTATTGAAGAGTTTAAGGTACCATCCCTAAACACGCAAGAAAACAACCATCAATTCAATCATGAAGTGAGTTTTAAGGTGGAGGATATGTTTGGAAACAATTCTCAAAACCAGCTTCAAGATAATTTTAAAATTGGAGCTTGGGATTTTGACCCTTTTATCCTTTGATTTCCAAGTTGATTAATTAACTTTCTTTAAAAAAAAATAATAAAGTTTTTTGTAATTAATTTTAATAATATTGTTTTTCTCGATTG TATTATTTCACTTCAACTACAAAAACACACTTACATATATAAGCTAAGCTAAGAGATCATATACCACACATTATTATCTAACACACACCACCTCAATCCAAACATTATTGTTATTATTATTTCTCTCTTCCAACAACAAATAATATATATATATATAGAAACAATAACATAAGCCATATATACATGAGGAAGCCAGCTGATTCCACCGCCGCCAACATCCGGCTGAGGAAAGGCCTTTGGTCGCCGGAGGAGGACGAGAAGCTGATGAGATACATGCTCTCCAATGGCCAAGGCTGCTGGACCGACATTGCCCGAAATGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATTAACTATCTCCGCCCTGACCTTAAACGTGGAGCTTTCTCTCCTCAAGAAGAACAACTCATTCTCCATCTGCATTCTCTTCTGGGCAATAGGTGGTCTCAAATAGCATCACGTCTACCTGGACGAACGGATAATGAAATAAAGAATTTCTGGAACTCCACGTTGAAAAAGAGAATGAAGAATCGTAATTACAATATTACCCCTTCTCCAAACTTAAGCCAATCATCCGAACCTAGAAGTAACAGCAGCTTCGGAGAGCACCTAAGTTCTTCCGAACCATTATTATTCCCTACATTATTGGACGACAACCACCAATTATATAACACGTTTGGTGGTGGTGGTGCAATGGAAGAGGGGTATTTTGGGGATTACACCACAACAATATTAGAGCCTAAGGAATTTGTGAAGGACTTTTATGACTTTTCTCACCTTCCTCCACTTGGAAATGGAGACATTATTATTGAAGAGTTTAAGGTACCATCCCTAAACACGCAAGAAAACAACCATCAATTCAATCATGAAGTGAGTTTTAAGGTGGAGGATATGTTTGGAAACAATTCTCAAAACCAGCTTCAAGATAATTTTAAAATTGGAGCTTGGGATTTTGACCCTTTTATCCTTTGATTTCCAAGTTGATTAATTAACTTTCTTTAAAAAAAAATAATAAAGTTTTTTGTAATTAATTTTAATAATATTGTTTTTCTCGATTG ATGAGGAAGCCAGCTGATTCCACCGCCGCCAACATCCGGCTGAGGAAAGGCCTTTGGTCGCCGGAGGAGGACGAGAAGCTGATGAGATACATGCTCTCCAATGGCCAAGGCTGCTGGACCGACATTGCCCGAAATGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATTAACTATCTCCGCCCTGACCTTAAACGTGGAGCTTTCTCTCCTCAAGAAGAACAACTCATTCTCCATCTGCATTCTCTTCTGGGCAATAGGTGGTCTCAAATAGCATCACGTCTACCTGGACGAACGGATAATGAAATAAAGAATTTCTGGAACTCCACGTTGAAAAAGAGAATGAAGAATCGTAATTACAATATTACCCCTTCTCCAAACTTAAGCCAATCATCCGAACCTAGAAGTAACAGCAGCTTCGGAGAGCACCTAAGTTCTTCCGAACCATTATTATTCCCTACATTATTGGACGACAACCACCAATTATATAACACGTTTGGTGGTGGTGGTGCAATGGAAGAGGGGTATTTTGGGGATTACACCACAACAATATTAGAGCCTAAGGAATTTGTGAAGGACTTTTATGACTTTTCTCACCTTCCTCCACTTGGAAATGGAGACATTATTATTGAAGAGTTTAAGGTACCATCCCTAAACACGCAAGAAAACAACCATCAATTCAATCATGAAGTGAGTTTTAAGGTGGAGGATATGTTTGGAAACAATTCTCAAAACCAGCTTCAAGATAATTTTAAAATTGGAGCTTGGGATTTTGACCCTTTTATCCTTTGA MRKPADSTAANIRLRKGLWSPEEDEKLMRYMLSNGQGCWTDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPQEEQLILHLHSLLGNRWSQIASRLPGRTDNEIKNFWNSTLKKRMKNRNYNITPSPNLSQSSEPRSNSSFGEHLSSSEPLLFPTLLDDNHQLYNTFGGGGAMEEGYFGDYTTTILEPKEFVKDFYDFSHLPPLGNGDIIIEEFKVPSLNTQENNHQFNHEVSFKVEDMFGNNSQNQLQDNFKIGAWDFDPFIL Homology
BLAST of ClCG09G004180 vs. NCBI nr
Match: XP_038896276.1 (transcription factor MYB83, partial [Benincasa hispida]) HSP 1 Score: 507.3 bits (1305), Expect = 8.1e-140 Identity = 242/265 (91.32%), Postives = 252/265 (95.09%), Query Frame = 0
BLAST of ClCG09G004180 vs. NCBI nr
Match: XP_008461287.1 (PREDICTED: transcription factor MYB46 [Cucumis melo]) HSP 1 Score: 419.5 bits (1077), Expect = 2.2e-113 Identity = 226/288 (78.47%), Postives = 248/288 (86.11%), Query Frame = 0
BLAST of ClCG09G004180 vs. NCBI nr
Match: XP_004136117.1 (transcription factor MYB83 [Cucumis sativus] >KAE8646404.1 hypothetical protein Csa_016492 [Cucumis sativus]) HSP 1 Score: 410.6 bits (1054), Expect = 1.0e-110 Identity = 220/284 (77.46%), Postives = 238/284 (83.80%), Query Frame = 0
BLAST of ClCG09G004180 vs. NCBI nr
Match: XP_023549385.1 (transcription factor MYB83 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 368.2 bits (944), Expect = 5.8e-98 Identity = 204/314 (64.97%), Postives = 229/314 (72.93%), Query Frame = 0
BLAST of ClCG09G004180 vs. NCBI nr
Match: XP_022953992.1 (transcription factor MYB83 [Cucurbita moschata]) HSP 1 Score: 365.2 bits (936), Expect = 4.9e-97 Identity = 202/315 (64.13%), Postives = 227/315 (72.06%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy Swiss-Prot
Match: Q9C6U1 (Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 2.0e-61 Identity = 141/303 (46.53%), Postives = 172/303 (56.77%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy Swiss-Prot
Match: Q9LXV2 (Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 3.2e-54 Identity = 105/152 (69.08%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 4.6e-45 Identity = 88/147 (59.86%), Postives = 113/147 (76.87%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 6.0e-45 Identity = 88/139 (63.31%), Postives = 109/139 (78.42%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3) HSP 1 Score: 175.6 bits (444), Expect = 7.3e-43 Identity = 82/135 (60.74%), Postives = 100/135 (74.07%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy TrEMBL
Match: A0A1S3CED2 (transcription factor MYB46 OS=Cucumis melo OX=3656 GN=LOC103499922 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 1.1e-113 Identity = 226/288 (78.47%), Postives = 248/288 (86.11%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy TrEMBL
Match: A0A6J1GPS9 (transcription factor MYB83 OS=Cucurbita moschata OX=3662 GN=LOC111456384 PE=4 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 2.4e-97 Identity = 202/315 (64.13%), Postives = 227/315 (72.06%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy TrEMBL
Match: A0A6J1JS46 (transcription factor MYB83-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488411 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 2.5e-94 Identity = 196/318 (61.64%), Postives = 224/318 (70.44%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy TrEMBL
Match: A0A6J1DG43 (transcription factor MYB83-like OS=Momordica charantia OX=3673 GN=LOC111019786 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 4.2e-86 Identity = 186/307 (60.59%), Postives = 216/307 (70.36%), Query Frame = 0
BLAST of ClCG09G004180 vs. ExPASy TrEMBL
Match: A0A6J1JN89 (transcription factor MYB83-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488411 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 9.1e-81 Identity = 168/257 (65.37%), Postives = 187/257 (72.76%), Query Frame = 0
BLAST of ClCG09G004180 vs. TAIR 10
Match: AT3G08500.1 (myb domain protein 83 ) HSP 1 Score: 237.3 bits (604), Expect = 1.4e-62 Identity = 141/303 (46.53%), Postives = 172/303 (56.77%), Query Frame = 0
BLAST of ClCG09G004180 vs. TAIR 10
Match: AT5G12870.1 (myb domain protein 46 ) HSP 1 Score: 213.4 bits (542), Expect = 2.2e-55 Identity = 105/152 (69.08%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of ClCG09G004180 vs. TAIR 10
Match: AT1G09540.1 (myb domain protein 61 ) HSP 1 Score: 183.0 bits (463), Expect = 3.2e-46 Identity = 88/147 (59.86%), Postives = 113/147 (76.87%), Query Frame = 0
BLAST of ClCG09G004180 vs. TAIR 10
Match: AT5G26660.1 (myb domain protein 86 ) HSP 1 Score: 182.6 bits (462), Expect = 4.2e-46 Identity = 88/139 (63.31%), Postives = 109/139 (78.42%), Query Frame = 0
BLAST of ClCG09G004180 vs. TAIR 10
Match: AT4G01680.1 (myb domain protein 55 ) HSP 1 Score: 181.8 bits (460), Expect = 7.2e-46 Identity = 80/109 (73.39%), Postives = 94/109 (86.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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