Homology
BLAST of ClCG09G003950 vs. NCBI nr
Match:
XP_038898940.1 (pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Benincasa hispida] >XP_038898941.1 pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Benincasa hispida] >XP_038898942.1 pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Benincasa hispida])
HSP 1 Score: 721.8 bits (1862), Expect = 3.2e-204
Identity = 359/391 (91.82%), Postives = 372/391 (95.14%), Query Frame = 0
Query: 15 NPYKTILAKDHLKSFLFKGVVTKSFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQA 74
N ++T L KDHLK F FKGV+TKSFKIFGLLRQQQWYEPRCQTYTKLLMLL KCRQPEQA
Sbjct: 106 NLWETALKKDHLKRFSFKGVITKSFKIFGLLRQQQWYEPRCQTYTKLLMLLSKCRQPEQA 165
Query: 75 SLLFQIMFSEGLKPSIDVYTALVSAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILID 134
SLLFQIMFSEGLKPSIDVYTALVSAYGQSGLL KAISTV EMKSVSDCKPDV TYSILID
Sbjct: 166 SLLFQIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVVEMKSVSDCKPDVRTYSILID 225
Query: 135 CCTRLRRFDLLKDILADMSYLGITSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCP 194
CCTR RRFDLLK+I ADMSYLGIT NTVTYNTIINGFGKAKMF+QMESLLLEMIESD+CP
Sbjct: 226 CCTRHRRFDLLKEIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCP 285
Query: 195 PDLITFNTFIRAYGNSEQIEKMEKWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSV 254
PDLITFNTFIRAYGNSEQIEKMEKWY EFQLMGIEPDIWTYN+MI+SYGKAGMY KMVSV
Sbjct: 286 PDLITFNTFIRAYGNSEQIEKMEKWYNEFQLMGIEPDIWTYNTMITSYGKAGMYDKMVSV 345
Query: 255 LNFMEKRFFSPTIVTMNTIIDVFGRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGK 314
LNFMEKRFFSPTIVTMNTIIDVFGRAGNIEEMEEYFKKMKFQGMKPNSVT+CSLVNAYGK
Sbjct: 346 LNFMEKRFFSPTIVTMNTIIDVFGRAGNIEEMEEYFKKMKFQGMKPNSVTFCSLVNAYGK 405
Query: 315 SGDIEKVDLILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGIT 374
SG+IEKVD ILRQIENSDVV DTPLFNCLINVYGQAGDVRKMG+LFLEMKENKC PDGIT
Sbjct: 406 SGNIEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGDVRKMGDLFLEMKENKCEPDGIT 465
Query: 375 YATMIRALKAQGMTEAAQRLENKLIATRDNE 406
+ATMIRALKAQGMTEAAQRLENKLI RD+E
Sbjct: 466 FATMIRALKAQGMTEAAQRLENKLIVGRDDE 496
BLAST of ClCG09G003950 vs. NCBI nr
Match:
XP_008461329.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X2 [Cucumis melo])
HSP 1 Score: 700.7 bits (1807), Expect = 7.6e-198
Identity = 344/368 (93.48%), Postives = 355/368 (96.47%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLF+IMFSEGLKPSIDVYTALV
Sbjct: 110 ALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALV 169
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAYGQSGLL KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLK++LADMSYLGI
Sbjct: 170 SAYGQSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGI 229
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
T NTVTYNTIINGFGKAKMF+QMESLLLEMIESD+CPPDLITFNTFIRAYGNSEQIEKME
Sbjct: 230 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME 289
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
KWY EFQLMGIEPD+WTYN+MISSYGKAGMY KM SVLNFMEKRFFSPTIVTMNTIID F
Sbjct: 290 KWYDEFQLMGIEPDVWTYNTMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDTF 349
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GR GNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGD+EK+D ILRQIENSDVV DT
Sbjct: 350 GRTGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDLEKIDSILRQIENSDVVPDT 409
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
PLFNCLIN YGQAGDVRKMGELFLEMKENKCVPDGIT+ATMIRALKAQGMTEAAQRLENK
Sbjct: 410 PLFNCLINAYGQAGDVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEAAQRLENK 469
Query: 398 LIATRDNE 406
LIAT D E
Sbjct: 470 LIATNDGE 477
BLAST of ClCG09G003950 vs. NCBI nr
Match:
XP_008461323.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo] >XP_008461324.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo] >XP_008461325.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo] >XP_008461327.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo] >XP_008461328.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis melo])
HSP 1 Score: 699.1 bits (1803), Expect = 2.2e-197
Identity = 343/366 (93.72%), Postives = 354/366 (96.72%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLF+IMFSEGLKPSIDVYTALV
Sbjct: 110 ALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALV 169
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAYGQSGLL KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLK++LADMSYLGI
Sbjct: 170 SAYGQSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGI 229
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
T NTVTYNTIINGFGKAKMF+QMESLLLEMIESD+CPPDLITFNTFIRAYGNSEQIEKME
Sbjct: 230 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME 289
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
KWY EFQLMGIEPD+WTYN+MISSYGKAGMY KM SVLNFMEKRFFSPTIVTMNTIID F
Sbjct: 290 KWYDEFQLMGIEPDVWTYNTMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDTF 349
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GR GNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGD+EK+D ILRQIENSDVV DT
Sbjct: 350 GRTGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDLEKIDSILRQIENSDVVPDT 409
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
PLFNCLIN YGQAGDVRKMGELFLEMKENKCVPDGIT+ATMIRALKAQGMTEAAQRLENK
Sbjct: 410 PLFNCLINAYGQAGDVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEAAQRLENK 469
Query: 398 LIATRD 404
LIAT D
Sbjct: 470 LIATND 475
BLAST of ClCG09G003950 vs. NCBI nr
Match:
KAE8646394.1 (hypothetical protein Csa_016103 [Cucumis sativus])
HSP 1 Score: 693.7 bits (1789), Expect = 9.2e-196
Identity = 344/368 (93.48%), Postives = 354/368 (96.20%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIFGLLRQQQWYEPRCQTYTKLLMLLGKC+QPEQASLLF+IMFSEGLKPSIDVYTALV
Sbjct: 84 ALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALV 143
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAYGQSGLL KAISTVDEMKS+SDCKPDVHTYSILIDCCTRLRRFDLLK ILADMS LGI
Sbjct: 144 SAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGI 203
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
T NTVTYNTIINGFGKAKMF+QMESLLLEMIESD+CPPDLITFNTFIRAYGNSEQIEKME
Sbjct: 204 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME 263
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
KWY+EFQLMGIEPDIWTYNSMISSYGKAGMY KM SVLNFMEKRFFSPTIVTMNTIID F
Sbjct: 264 KWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSF 323
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GRAGNIEEMEEYFK MKFQGMKPNSVTYCSLVNAYGKSGD+EKVD ILRQIENSDVV DT
Sbjct: 324 GRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDT 383
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
PLFNCLINVYGQAG+VRKMGELFLEMKENKCVPDGIT+ATMIRALKAQGMTE AQRLENK
Sbjct: 384 PLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLENK 443
Query: 398 LIATRDNE 406
LIAT D E
Sbjct: 444 LIATNDGE 451
BLAST of ClCG09G003950 vs. NCBI nr
Match:
XP_004135941.1 (pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis sativus] >XP_031745180.1 pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis sativus] >XP_031745181.1 pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis sativus])
HSP 1 Score: 693.7 bits (1789), Expect = 9.2e-196
Identity = 344/368 (93.48%), Postives = 354/368 (96.20%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIFGLLRQQQWYEPRCQTYTKLLMLLGKC+QPEQASLLF+IMFSEGLKPSIDVYTALV
Sbjct: 110 ALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALV 169
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAYGQSGLL KAISTVDEMKS+SDCKPDVHTYSILIDCCTRLRRFDLLK ILADMS LGI
Sbjct: 170 SAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGI 229
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
T NTVTYNTIINGFGKAKMF+QMESLLLEMIESD+CPPDLITFNTFIRAYGNSEQIEKME
Sbjct: 230 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME 289
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
KWY+EFQLMGIEPDIWTYNSMISSYGKAGMY KM SVLNFMEKRFFSPTIVTMNTIID F
Sbjct: 290 KWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSF 349
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GRAGNIEEMEEYFK MKFQGMKPNSVTYCSLVNAYGKSGD+EKVD ILRQIENSDVV DT
Sbjct: 350 GRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDT 409
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
PLFNCLINVYGQAG+VRKMGELFLEMKENKCVPDGIT+ATMIRALKAQGMTE AQRLENK
Sbjct: 410 PLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLENK 469
Query: 398 LIATRDNE 406
LIAT D E
Sbjct: 470 LIATNDGE 477
BLAST of ClCG09G003950 vs. ExPASy Swiss-Prot
Match:
Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)
HSP 1 Score: 491.5 bits (1264), Expect = 9.1e-138
Identity = 227/367 (61.85%), Postives = 297/367 (80.93%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIF LLR+Q WYEPRC+TYTKL +LG C+QP+QASLLF++M SEGLKP+IDVYT+L+
Sbjct: 77 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 136
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
S YG+S LLDKA ST++ MKSVSDCKPDV T+++LI CC +L RFDL+K I+ +MSYLG+
Sbjct: 137 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 196
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
+TVTYNTII+G+GKA MF++MES+L +MIE + PD+ T N+ I +YGN + KME
Sbjct: 197 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKME 256
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
WY FQLMG++PDI T+N +I S+GKAGMY KM SV++FMEKRFFS T VT N +I+ F
Sbjct: 257 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 316
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
G+AG IE+M++ F+KMK+QG+KPNS+TYCSLVNAY K+G + K+D +LRQI NSDVVLDT
Sbjct: 317 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDT 376
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
P FNC+IN YGQAGD+ M EL+++M+E KC PD IT+ATMI+ A G+ +A Q LE +
Sbjct: 377 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 436
Query: 398 LIATRDN 405
+I++ +N
Sbjct: 437 MISSGEN 443
BLAST of ClCG09G003950 vs. ExPASy Swiss-Prot
Match:
Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)
HSP 1 Score: 347.4 bits (890), Expect = 2.1e-94
Identity = 170/357 (47.62%), Postives = 247/357 (69.19%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ ++F LLR+Q WY+P Y KL+++LGKC+QPE+A LFQ M +EG + +VYTALV
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAY +SG D A + ++ MKS +C+PDVHTYSILI ++ FD ++D+L+DM GI
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
NT+TYNT+I+ +GKAKMF +MES L++M+ D+C PD T N+ +RA+G + QIE ME
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
Y++FQ GIEP+I T+N ++ SYGK+G Y KM +V+ +M+K +S TIVT N +ID F
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GRAG++++ME F+ M+ + + P+ VT CSLV AYG++ +K+ +LR IENSD+ LD
Sbjct: 373 GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDL 432
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRL 395
FNCL++ YG+ +M + M++ PD ITY TM++A + GMT + L
Sbjct: 433 VFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
BLAST of ClCG09G003950 vs. ExPASy Swiss-Prot
Match:
Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)
HSP 1 Score: 294.7 bits (753), Expect = 1.6e-78
Identity = 148/387 (38.24%), Postives = 235/387 (60.72%), Query Frame = 0
Query: 26 LKSFLFKGVVTKSFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEG 85
L + K ++ ++F +LR+Q +Y+P+ TY KLL+LLGK QP +A LF M EG
Sbjct: 95 LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEG 154
Query: 86 LKPSIDVYTALVSAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLL 145
L+P++++YTAL++AY +S L+D A S +D+MKS C+PDV TYS L+ C +FDL+
Sbjct: 155 LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 146 KDILADMSYLGITSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIR 205
+ +M IT NTVT N +++G+G+ F QME +L +M+ S C PD+ T N +
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 274
Query: 206 AYGNSEQIEKMEKWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSP 265
+GN +I+ ME WY++F+ GIEP+ T+N +I SYGK MY KM SV+ +M K F
Sbjct: 275 VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPW 334
Query: 266 TIVTMNTIIDVFGRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLIL 325
T T N II+ F G+ + ME F +M+ +GMK ++ T+C L+N Y +G KV +
Sbjct: 335 TTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSV 394
Query: 326 RQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQ 385
+ ++ +T +N +I+ +A D+ +M +++ MKE +CV D T+ M+ A + +
Sbjct: 395 QLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKE 454
Query: 386 GMT-------EAAQRLENKLIATRDNE 406
GM + Q+L ++ +AT++ E
Sbjct: 455 GMNDKIYYLEQERQKLMDRTVATKEME 481
BLAST of ClCG09G003950 vs. ExPASy Swiss-Prot
Match:
Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 1.9e-42
Identity = 113/395 (28.61%), Postives = 189/395 (47.85%), Query Frame = 0
Query: 14 LNPYKTILAKDHLKSFLFKGVVTKSFK------IFGLLRQQQWYEPRCQTYTKLLMLLGK 73
L+ Y ++ DH FL + KS K +F +++Q+WY P Y+KL+ ++GK
Sbjct: 88 LDKYVKVVRCDH--CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGK 147
Query: 74 CRQPEQASLLFQIMFSEGLKPSIDVYTALVSAY----GQSGLLDKAISTVDEMKSVSDCK 133
Q A LF M + G +P VY AL++A+ ++ L+K +D+MK + C+
Sbjct: 148 KGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQ 207
Query: 134 PDVHTYSILIDCCTRLRRFDLLKDILADMSYLGITSNTVTYNTIINGFGKAKMFQQMESL 193
P+V TY+IL+ + + D + + D+ ++ + T+N +++ +GK M ++ME++
Sbjct: 208 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 267
Query: 194 LLEMIESDNCPPDLITFNTFIRAYGNSEQIEKMEKWYQEFQLMGIEPDIWTYNSMISSYG 253
L M S+ C PD+ITFN I +YG ++ EKME+ ++ +P + T+NSMI +YG
Sbjct: 268 LTRM-RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 327
Query: 254 KAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIEEMEEYFKKMKFQGMKPNSV 313
KA M I++ E FKKM P+ +
Sbjct: 328 KARM-----------------------------------IDKAEWVFKKMNDMNYIPSFI 387
Query: 314 TYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEM 373
TY ++ YG G + + I ++ SD VL N ++ VY + G + +LF
Sbjct: 388 TYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNA 444
Query: 374 KENKCVPDGITYATMIRALKAQGMTEAAQRLENKL 399
+ PD TY + +A M E Q L K+
Sbjct: 448 SAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
BLAST of ClCG09G003950 vs. ExPASy Swiss-Prot
Match:
Q9FLD8 (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g39980 PE=2 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 3.6e-41
Identity = 101/389 (25.96%), Postives = 194/389 (49.87%), Query Frame = 0
Query: 37 KSFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTAL 96
+S + + ++ Y P Y +L + + +Q + A LF M L P Y+ L
Sbjct: 137 RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 196
Query: 97 VSAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLG 156
++++G+ G+ D A+S + +M+ D+ YS LI+ RL + I + + G
Sbjct: 197 ITSFGKEGMFDSALSWLQKMEQ-DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSG 256
Query: 157 ITSNTVTYNTIINGFGKAKMFQQMESLLLEMIESD------------------------- 216
IT + V YN++IN +GKAK+F++ L+ EM E+
Sbjct: 257 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEAL 316
Query: 217 ---------NCPPDLITFNTFIRAYGNSEQIEKMEKWYQEFQLMGIEPDIWTYNSMISSY 276
NC DL T N I YG + +++ ++ + + M IEP++ +YN+++ Y
Sbjct: 317 SVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 376
Query: 277 GKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIEEMEEYFKKMKFQGMKPNS 336
G+A ++G+ + + M+++ +VT NT+I ++G+ E+ ++M+ +G++PN+
Sbjct: 377 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNA 436
Query: 337 VTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLE 392
+TY ++++ +GK+G +++ + +++ +S V +D L+ +I Y + G + L E
Sbjct: 437 ITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHE 496
BLAST of ClCG09G003950 vs. ExPASy TrEMBL
Match:
A0A1S3CFP9 (pentatricopeptide repeat-containing protein At3g53170 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499948 PE=4 SV=1)
HSP 1 Score: 700.7 bits (1807), Expect = 3.7e-198
Identity = 344/368 (93.48%), Postives = 355/368 (96.47%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLF+IMFSEGLKPSIDVYTALV
Sbjct: 110 ALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALV 169
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAYGQSGLL KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLK++LADMSYLGI
Sbjct: 170 SAYGQSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGI 229
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
T NTVTYNTIINGFGKAKMF+QMESLLLEMIESD+CPPDLITFNTFIRAYGNSEQIEKME
Sbjct: 230 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME 289
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
KWY EFQLMGIEPD+WTYN+MISSYGKAGMY KM SVLNFMEKRFFSPTIVTMNTIID F
Sbjct: 290 KWYDEFQLMGIEPDVWTYNTMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDTF 349
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GR GNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGD+EK+D ILRQIENSDVV DT
Sbjct: 350 GRTGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDLEKIDSILRQIENSDVVPDT 409
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
PLFNCLIN YGQAGDVRKMGELFLEMKENKCVPDGIT+ATMIRALKAQGMTEAAQRLENK
Sbjct: 410 PLFNCLINAYGQAGDVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEAAQRLENK 469
Query: 398 LIATRDNE 406
LIAT D E
Sbjct: 470 LIATNDGE 477
BLAST of ClCG09G003950 vs. ExPASy TrEMBL
Match:
A0A1S3CEG4 (pentatricopeptide repeat-containing protein At3g53170 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499948 PE=4 SV=1)
HSP 1 Score: 699.1 bits (1803), Expect = 1.1e-197
Identity = 343/366 (93.72%), Postives = 354/366 (96.72%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLF+IMFSEGLKPSIDVYTALV
Sbjct: 110 ALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALV 169
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAYGQSGLL KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLK++LADMSYLGI
Sbjct: 170 SAYGQSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGI 229
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
T NTVTYNTIINGFGKAKMF+QMESLLLEMIESD+CPPDLITFNTFIRAYGNSEQIEKME
Sbjct: 230 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME 289
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
KWY EFQLMGIEPD+WTYN+MISSYGKAGMY KM SVLNFMEKRFFSPTIVTMNTIID F
Sbjct: 290 KWYDEFQLMGIEPDVWTYNTMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDTF 349
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GR GNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGD+EK+D ILRQIENSDVV DT
Sbjct: 350 GRTGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDLEKIDSILRQIENSDVVPDT 409
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
PLFNCLIN YGQAGDVRKMGELFLEMKENKCVPDGIT+ATMIRALKAQGMTEAAQRLENK
Sbjct: 410 PLFNCLINAYGQAGDVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEAAQRLENK 469
Query: 398 LIATRD 404
LIAT D
Sbjct: 470 LIATND 475
BLAST of ClCG09G003950 vs. ExPASy TrEMBL
Match:
A0A0A0K9Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426480 PE=4 SV=1)
HSP 1 Score: 693.7 bits (1789), Expect = 4.5e-196
Identity = 344/368 (93.48%), Postives = 354/368 (96.20%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIFGLLRQQQWYEPRCQTYTKLLMLLGKC+QPEQASLLF+IMFSEGLKPSIDVYTALV
Sbjct: 110 ALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALV 169
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAYGQSGLL KAISTVDEMKS+SDCKPDVHTYSILIDCCTRLRRFDLLK ILADMS LGI
Sbjct: 170 SAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGI 229
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
T NTVTYNTIINGFGKAKMF+QMESLLLEMIESD+CPPDLITFNTFIRAYGNSEQIEKME
Sbjct: 230 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME 289
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
KWY+EFQLMGIEPDIWTYNSMISSYGKAGMY KM SVLNFMEKRFFSPTIVTMNTIID F
Sbjct: 290 KWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSF 349
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GRAGNIEEMEEYFK MKFQGMKPNSVTYCSLVNAYGKSGD+EKVD ILRQIENSDVV DT
Sbjct: 350 GRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDT 409
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
PLFNCLINVYGQAG+VRKMGELFLEMKENKCVPDGIT+ATMIRALKAQGMTE AQRLENK
Sbjct: 410 PLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLENK 469
Query: 398 LIATRDNE 406
LIAT D E
Sbjct: 470 LIATNDGE 477
BLAST of ClCG09G003950 vs. ExPASy TrEMBL
Match:
A0A6J1KQP7 (pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita maxima OX=3661 GN=LOC111497808 PE=4 SV=1)
HSP 1 Score: 666.8 bits (1719), Expect = 5.9e-188
Identity = 327/368 (88.86%), Postives = 347/368 (94.29%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIFGLLRQQ WYEPRC+TYTKLLM+LGKCRQP+QASLLFQIM SEGLKPSIDVYTALV
Sbjct: 84 TLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPKQASLLFQIMLSEGLKPSIDVYTALV 143
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAYG+SGLL KAI TVDEMKS+SDCKPDVHTYSILIDCCTR RR DLLKDILADMSYLGI
Sbjct: 144 SAYGRSGLLHKAIETVDEMKSISDCKPDVHTYSILIDCCTRFRRLDLLKDILADMSYLGI 203
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
T NTVTYNTIINGFGKAKMF+QMESLLLEMIES +C PDLITFN+FIRAYGNSEQIEKME
Sbjct: 204 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESGSCLPDLITFNSFIRAYGNSEQIEKME 263
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
KWY EFQLMGIEPD WTYN+MISSYGKA MY KMVSVLNFMEKRFFSPTIVTMNTIIDVF
Sbjct: 264 KWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVF 323
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GRAGNI+ MEEYF+KMK+QGMKPNSVTYCSLVNAYGK+G+IEKVD ILRQIENSDVVLDT
Sbjct: 324 GRAGNIKRMEEYFRKMKYQGMKPNSVTYCSLVNAYGKAGNIEKVDSILRQIENSDVVLDT 383
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
PLFNCLINVYGQAGDVRKMGELFLEM+ENKCVPD IT+ATM+ ALK GMTEAAQRLENK
Sbjct: 384 PLFNCLINVYGQAGDVRKMGELFLEMEENKCVPDSITFATMVHALKTHGMTEAAQRLENK 443
Query: 398 LIATRDNE 406
LI TRD++
Sbjct: 444 LIVTRDDK 451
BLAST of ClCG09G003950 vs. ExPASy TrEMBL
Match:
A0A6J1HAD9 (pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita moschata OX=3662 GN=LOC111461045 PE=4 SV=1)
HSP 1 Score: 664.5 bits (1713), Expect = 2.9e-187
Identity = 326/368 (88.59%), Postives = 345/368 (93.75%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIFGLLRQQ WYEPRC+TYTKLLM+LGKCRQPEQASLLFQIM SEGLKPSIDVYTALV
Sbjct: 110 TLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALV 169
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAYG+SGLL +AI TVDEMKS+SDCKPDVHTYSILIDCCTR RR DLLKDILADMSYLGI
Sbjct: 170 SAYGRSGLLHEAIETVDEMKSISDCKPDVHTYSILIDCCTRFRRLDLLKDILADMSYLGI 229
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
T NTVTYNTIINGFGKAKMF+QMESLLLEMIES +C PDLITFN+FIRAYGNSEQIEKME
Sbjct: 230 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESGSCLPDLITFNSFIRAYGNSEQIEKME 289
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
KWY EFQLMGIEPD WTYN+MISSYGKA MY KMVSVLNFMEKRFFSPTIVTMNTIIDVF
Sbjct: 290 KWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVF 349
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GRAGN++ MEEYF+KMK QGMKPNSVTYCSLVNAYGK+G+IEKVD ILRQIENSDVVLDT
Sbjct: 350 GRAGNVKRMEEYFRKMKHQGMKPNSVTYCSLVNAYGKAGNIEKVDSILRQIENSDVVLDT 409
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
PLFNCLINVYGQAGDVRKMGELFLEMKEN+CVPD IT+ATM+ ALK GMTEAAQRLENK
Sbjct: 410 PLFNCLINVYGQAGDVRKMGELFLEMKENRCVPDSITFATMVHALKTHGMTEAAQRLENK 469
Query: 398 LIATRDNE 406
LI RDN+
Sbjct: 470 LIVGRDNK 477
BLAST of ClCG09G003950 vs. TAIR 10
Match:
AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 489.6 bits (1259), Expect = 2.5e-138
Identity = 226/364 (62.09%), Postives = 295/364 (81.04%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ KIF LLR+Q WYEPRC+TYTKL +LG C+QP+QASLLF++M SEGLKP+IDVYT+L+
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
S YG+S LLDKA ST++ MKSVSDCKPDV T+++LI CC +L RFDL+K I+ +MSYLG+
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
+TVTYNTII+G+GKA MF++MES+L +MIE + PD+ T N+ I +YGN + KME
Sbjct: 247 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKME 306
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
WY FQLMG++PDI T+N +I S+GKAGMY KM SV++FMEKRFFS T VT N +I+ F
Sbjct: 307 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 366
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
G+AG IE+M++ F+KMK+QG+KPNS+TYCSLVNAY K+G + K+D +LRQI NSDVVLDT
Sbjct: 367 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDT 426
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRLENK 397
P FNC+IN YGQAGD+ M EL+++M+E KC PD IT+ATMI+ A G+ +A Q LE +
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 486
Query: 398 LIAT 402
+I++
Sbjct: 487 MISS 490
BLAST of ClCG09G003950 vs. TAIR 10
Match:
AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 347.4 bits (890), Expect = 1.5e-95
Identity = 170/357 (47.62%), Postives = 247/357 (69.19%), Query Frame = 0
Query: 38 SFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEGLKPSIDVYTALV 97
+ ++F LLR+Q WY+P Y KL+++LGKC+QPE+A LFQ M +EG + +VYTALV
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 98 SAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKDILADMSYLGI 157
SAY +SG D A + ++ MKS +C+PDVHTYSILI ++ FD ++D+L+DM GI
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 158 TSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIRAYGNSEQIEKME 217
NT+TYNT+I+ +GKAKMF +MES L++M+ D+C PD T N+ +RA+G + QIE ME
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 218 KWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVF 277
Y++FQ GIEP+I T+N ++ SYGK+G Y KM +V+ +M+K +S TIVT N +ID F
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Query: 278 GRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDT 337
GRAG++++ME F+ M+ + + P+ VT CSLV AYG++ +K+ +LR IENSD+ LD
Sbjct: 373 GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDL 432
Query: 338 PLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQGMTEAAQRL 395
FNCL++ YG+ +M + M++ PD ITY TM++A + GMT + L
Sbjct: 433 VFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
BLAST of ClCG09G003950 vs. TAIR 10
Match:
AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 294.7 bits (753), Expect = 1.2e-79
Identity = 148/387 (38.24%), Postives = 235/387 (60.72%), Query Frame = 0
Query: 26 LKSFLFKGVVTKSFKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQASLLFQIMFSEG 85
L + K ++ ++F +LR+Q +Y+P+ TY KLL+LLGK QP +A LF M EG
Sbjct: 95 LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEG 154
Query: 86 LKPSIDVYTALVSAYGQSGLLDKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLL 145
L+P++++YTAL++AY +S L+D A S +D+MKS C+PDV TYS L+ C +FDL+
Sbjct: 155 LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 146 KDILADMSYLGITSNTVTYNTIINGFGKAKMFQQMESLLLEMIESDNCPPDLITFNTFIR 205
+ +M IT NTVT N +++G+G+ F QME +L +M+ S C PD+ T N +
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 274
Query: 206 AYGNSEQIEKMEKWYQEFQLMGIEPDIWTYNSMISSYGKAGMYGKMVSVLNFMEKRFFSP 265
+GN +I+ ME WY++F+ GIEP+ T+N +I SYGK MY KM SV+ +M K F
Sbjct: 275 VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPW 334
Query: 266 TIVTMNTIIDVFGRAGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYGKSGDIEKVDLIL 325
T T N II+ F G+ + ME F +M+ +GMK ++ T+C L+N Y +G KV +
Sbjct: 335 TTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSV 394
Query: 326 RQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDGITYATMIRALKAQ 385
+ ++ +T +N +I+ +A D+ +M +++ MKE +CV D T+ M+ A + +
Sbjct: 395 QLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKE 454
Query: 386 GMT-------EAAQRLENKLIATRDNE 406
GM + Q+L ++ +AT++ E
Sbjct: 455 GMNDKIYYLEQERQKLMDRTVATKEME 481
BLAST of ClCG09G003950 vs. TAIR 10
Match:
AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 174.9 bits (442), Expect = 1.3e-43
Identity = 113/395 (28.61%), Postives = 189/395 (47.85%), Query Frame = 0
Query: 14 LNPYKTILAKDHLKSFLFKGVVTKSFK------IFGLLRQQQWYEPRCQTYTKLLMLLGK 73
L+ Y ++ DH FL + KS K +F +++Q+WY P Y+KL+ ++GK
Sbjct: 88 LDKYVKVVRCDH--CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGK 147
Query: 74 CRQPEQASLLFQIMFSEGLKPSIDVYTALVSAY----GQSGLLDKAISTVDEMKSVSDCK 133
Q A LF M + G +P VY AL++A+ ++ L+K +D+MK + C+
Sbjct: 148 KGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQ 207
Query: 134 PDVHTYSILIDCCTRLRRFDLLKDILADMSYLGITSNTVTYNTIINGFGKAKMFQQMESL 193
P+V TY+IL+ + + D + + D+ ++ + T+N +++ +GK M ++ME++
Sbjct: 208 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 267
Query: 194 LLEMIESDNCPPDLITFNTFIRAYGNSEQIEKMEKWYQEFQLMGIEPDIWTYNSMISSYG 253
L M S+ C PD+ITFN I +YG ++ EKME+ ++ +P + T+NSMI +YG
Sbjct: 268 LTRM-RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 327
Query: 254 KAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIEEMEEYFKKMKFQGMKPNSV 313
KA M I++ E FKKM P+ +
Sbjct: 328 KARM-----------------------------------IDKAEWVFKKMNDMNYIPSFI 387
Query: 314 TYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEM 373
TY ++ YG G + + I ++ SD VL N ++ VY + G + +LF
Sbjct: 388 TYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNA 444
Query: 374 KENKCVPDGITYATMIRALKAQGMTEAAQRLENKL 399
+ PD TY + +A M E Q L K+
Sbjct: 448 SAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
BLAST of ClCG09G003950 vs. TAIR 10
Match:
AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 174.9 bits (442), Expect = 1.3e-43
Identity = 113/395 (28.61%), Postives = 189/395 (47.85%), Query Frame = 0
Query: 14 LNPYKTILAKDHLKSFLFKGVVTKSFK------IFGLLRQQQWYEPRCQTYTKLLMLLGK 73
L+ Y ++ DH FL + KS K +F +++Q+WY P Y+KL+ ++GK
Sbjct: 88 LDKYVKVVRCDH--CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGK 147
Query: 74 CRQPEQASLLFQIMFSEGLKPSIDVYTALVSAY----GQSGLLDKAISTVDEMKSVSDCK 133
Q A LF M + G +P VY AL++A+ ++ L+K +D+MK + C+
Sbjct: 148 KGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQ 207
Query: 134 PDVHTYSILIDCCTRLRRFDLLKDILADMSYLGITSNTVTYNTIINGFGKAKMFQQMESL 193
P+V TY+IL+ + + D + + D+ ++ + T+N +++ +GK M ++ME++
Sbjct: 208 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 267
Query: 194 LLEMIESDNCPPDLITFNTFIRAYGNSEQIEKMEKWYQEFQLMGIEPDIWTYNSMISSYG 253
L M S+ C PD+ITFN I +YG ++ EKME+ ++ +P + T+NSMI +YG
Sbjct: 268 LTRM-RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 327
Query: 254 KAGMYGKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIEEMEEYFKKMKFQGMKPNSV 313
KA M I++ E FKKM P+ +
Sbjct: 328 KARM-----------------------------------IDKAEWVFKKMNDMNYIPSFI 387
Query: 314 TYCSLVNAYGKSGDIEKVDLILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEM 373
TY ++ YG G + + I ++ SD VL N ++ VY + G + +LF
Sbjct: 388 TYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNA 444
Query: 374 KENKCVPDGITYATMIRALKAQGMTEAAQRLENKL 399
+ PD TY + +A M E Q L K+
Sbjct: 448 SAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038898940.1 | 3.2e-204 | 91.82 | pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Benincasa hisp... | [more] |
XP_008461329.1 | 7.6e-198 | 93.48 | PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X2 [Cuc... | [more] |
XP_008461323.1 | 2.2e-197 | 93.72 | PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cuc... | [more] |
KAE8646394.1 | 9.2e-196 | 93.48 | hypothetical protein Csa_016103 [Cucumis sativus] | [more] |
XP_004135941.1 | 9.2e-196 | 93.48 | pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Cucumis sativu... | [more] |
Match Name | E-value | Identity | Description | |
Q9SCP4 | 9.1e-138 | 61.85 | Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX... | [more] |
Q9FKC3 | 2.1e-94 | 47.62 | Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... | [more] |
Q9SQU6 | 1.6e-78 | 38.24 | Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... | [more] |
Q9SV96 | 1.9e-42 | 28.61 | Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... | [more] |
Q9FLD8 | 3.6e-41 | 25.96 | Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CFP9 | 3.7e-198 | 93.48 | pentatricopeptide repeat-containing protein At3g53170 isoform X2 OS=Cucumis melo... | [more] |
A0A1S3CEG4 | 1.1e-197 | 93.72 | pentatricopeptide repeat-containing protein At3g53170 isoform X1 OS=Cucumis melo... | [more] |
A0A0A0K9Q1 | 4.5e-196 | 93.48 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426480 PE=4 SV=1 | [more] |
A0A6J1KQP7 | 5.9e-188 | 88.86 | pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1HAD9 | 2.9e-187 | 88.59 | pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita moschata OX=3... | [more] |
Match Name | E-value | Identity | Description | |
AT3G53170.1 | 2.5e-138 | 62.09 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G48730.1 | 1.5e-95 | 47.62 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G06430.1 | 1.2e-79 | 38.24 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G39620.1 | 1.3e-43 | 28.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G39620.2 | 1.3e-43 | 28.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |