ClCG09G002030 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G002030
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	60S ribosomal protein L37
Location	CG_Chr09: 1877254 .. 1878556 (-)
RNA-Seq Expression	ClCG09G002030
Synteny	ClCG09G002030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCGATTTATGCTTCCGTATTATTGGTTTCAACTCTGTATTTTCGTTCGGTTAATCTACAGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAATAAGACCCATACTCTCTGTGTGCGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCCTGTGCTTTCCCTGCTGCTCGCAAGCGAAAATGTGAGTGATCTTGATCTTTCTGGCCTTTTCATCACTGTCCTCTTTATTTAGATTGATCTTAATCGGCTGTTCGGCCTGTGTTTATTTTCATTCAATGCGTCGCTGCTTTGGATTTGTTTAGTGAACGTTCGTATCTCTAGTAGTTAGTAGTTGGTAGTTAATAGTTAATATTGGGTACTGACCCTGAACACGGAGGCTAAAGTATGTGTGAATTTAATGAGGTTCGCTCGTTCGGTGAAGTAATACGGCTATACGAGATGTTTGTATTGCTGTTCCATGGAGCCTGGATTGATTGTGATTGTTTTCCTTTACCTTTGGGTTTTGTTTAGATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACAACTGGAACTGGAAGAATGAGGTACTTGCGCAATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGATGGTATGATATTGTGTTTATTGTTTATTTAACGCTTCGACTGTTTTCTTCATGTGTATGGGTTTTAGTACTTGTTCTGATGAAAAATTGTATTGGGTTTGTCACTAGGTACTGAAGCTGCACCCAGGAATAAAGGAGCAGCAGCATCAGCATAAGTTTTTTGGAAGAAGTTCGACTTAATTTCAGTACCCAACTATAGTTTTCAGTAGGGTTTTTACTCATCTGAGAATCATTTCATATAATTTTGTTTTCTAGTTTTGCCTTTTCATGATTTAGTTGAACGTGGTTTCCTTAAAATGTATTGTTTGAATTGTGGACAAATGATGAATCAGATTTTTCGTATTCTGCTACTTGTTTATGCATTTAAGCATACGATATGGTTTTCAGTATCGAATATTAGAATCTGTTTTCCCACAGGGAATCCCTGCTTGAAATGATAAATTTGCTTGCACTTTTCACCATAGCCCATGCCATCATCAACCAGCGTAACAATAATCTCTTGCTTCTTTCTCCTAAACTTCAGCCATTGATCATGTTCATTACAGTGATCAACAATTCTTACAGTTTCTTCCCATCATCAAACTTTCTTTTGCTGTATTTGAATTGAACGTGAAAGCACCCTTGGAGTCGGTAGTTTTAGTTTTAACAAAAGGCACGGGAAATTTTAATTTGGC

mRNA sequence

ATGTATCGATTTATGCTTCCGTATTATTGGTTTCAACTCTGTATTTTCGTTCGGTTAATCTACAGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAATAAGACCCATACTCTCTGTGTGCGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCCTGTGCTTTCCCTGCTGCTCGCAAGCGAAAATATTGATCTTAATCGGCTGTTCGGCCTGTGTTTATTTTCATTCAATGCGTCGCTGCTTTGGATTTGTTTAGTGAACGTTCATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACAACTGGAACTGGAAGAATGAGGTACTTGCGCAATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGATGGTACTGAAGCTGCACCCAGGAATAAAGGAGCAGCAGCATCAGCATAAGTTTTTTGGAAGAAGTTCGACTTAATTTCAGTACCCAACTATAGTTTTCAGTAGGGTTTTTACTCATCTGAGAATCATTTCATATAATTTTGTTTTCTAGTTTTGCCTTTTCATGATTTAGTTGAACGTGGTTTCCTTAAAATGTATTGTTTGAATTGTGGACAAATGATGAATCAGATTTTTCGTATTCTGCTACTTGTTTATGCATTTAAGCATACGATATGGTTTTCAGTATCGAATATTAGAATCTGTTTTCCCACAGGGAATCCCTGCTTGAAATGATAAATTTGCTTGCACTTTTCACCATAGCCCATGCCATCATCAACCAGCGTAACAATAATCTCTTGCTTCTTTCTCCTAAACTTCAGCCATTGATCATGTTCATTACAGTGATCAACAATTCTTACAGTTTCTTCCCATCATCAAACTTTCTTTTGCTGTATTTGAATTGAACGTGAAAGCACCCTTGGAGTCGGTAGTTTTAGTTTTAACAAAAGGCACGGGAAATTTTAATTTGGC

Coding sequence (CDS)

ATGTATCGATTTATGCTTCCGTATTATTGGTTTCAACTCTGTATTTTCGTTCGGTTAATCTACAGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAATAAGACCCATACTCTCTGTGTGCGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCCTGTGCTTTCCCTGCTGCTCGCAAGCGAAAATATTGATCTTAATCGGCTGTTCGGCCTGTGTTTATTTTCATTCAATGCGTCGCTGCTTTGGATTTGTTTAGTGAACGTTCATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACAACTGGAACTGGAAGAATGAGGTACTTGCGCAATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGATGGTACTGAAGCTGCACCCAGGAATAAAGGAGCAGCAGCATCAGCATAA

Protein sequence

MYRFMLPYYWFQLCIFVRLIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA

Homology

[Close]

BLAST of ClCG09G002030 vs. NCBI nr
Match: KAG7025798.1 (60S ribosomal protein L37-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.3 bits (373), Expect = 5.1e-32
Identity = 88/125 (70.40%), Postives = 91/125 (72.80%), Query Frame = 0


Query: 18  RLIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLC 77
           RLIYR RVR VLVRGG RPILSVCG AAAASISRRV VQ VLSLL ASEN          
Sbjct: 3   RLIYRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASEN---------- 62

Query: 78  LFSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKG 137
                            NWSVKAIRRKTTGTGRMRY+R+VPRRFKSGFR+GTEAAPRNKG
Sbjct: 63  -----------------NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKG 100

Query: 138 AAASA 143
           AAASA
Sbjct: 123 AAASA 100

[Close]

BLAST of ClCG09G002030 vs. NCBI nr
Match: PPD83667.1 (hypothetical protein GOBAR_DD19392 [Gossypium barbadense])

HSP 1 Score: 116.7 bits (291), Expect = 1.6e-22
Identity = 76/121 (62.81%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 22  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSF 81
           RER + VLV+ G RP LS  GV A ASISRRV   PVLSLLL+           L L  F
Sbjct: 3   REREQGVLVKEGTRPTLSALGVVAVASISRRVIALPVLSLLLS-----------LNLRGF 62

Query: 82  NASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAAS 141
             +LLW    +  NWSVKA RRKTTGTGRMRYL +VPRRFK+GFR+GTEAAPRNK AAAS
Sbjct: 63  --ALLW----DSDNWSVKANRRKTTGTGRMRYLLHVPRRFKTGFREGTEAAPRNKVAAAS 106

Query: 142 A 143
           A
Sbjct: 123 A 106

[Close]

BLAST of ClCG09G002030 vs. NCBI nr
Match: KAA3489293.1 (60S ribosomal protein L37-3 [Gossypium australe])

HSP 1 Score: 115.5 bits (288), Expect = 3.6e-22
Identity = 71/121 (58.68%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 22  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSF 81
           RER + VLV+ G RP LS   VAA ASISRR    PVLSLLL                  
Sbjct: 3   REREQGVLVKEGTRPTLSALDVAAVASISRRAVALPVLSLLLVRG--------------- 62

Query: 82  NASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAAS 141
                     +V+NWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFR+GTEAAPR K AAAS
Sbjct: 63  ----------HVNNWSVKAIRRKTTGTGRMRYLRHVPRRFKTGFREGTEAAPRKKVAAAS 98

Query: 142 A 143
           A
Sbjct: 123 A 98

[Close]

BLAST of ClCG09G002030 vs. NCBI nr
Match: KAB1218567.1 (60S ribosomal protein L37 [Morella rubra])

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-21
Identity = 74/124 (59.68%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 19  LIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCL 78
           LI R R +  LVRGG RP     GVAAAASISRRVA  PV   L A              
Sbjct: 16  LISRVREQGALVRGGTRPTPFALGVAAAASISRRVAAPPVPIPLPAR------------- 75

Query: 79  FSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGA 138
              N    W   V   NWSVKAIRRKTTGTGRMRYLR++PRRFKSGFR+GTEAAPR KGA
Sbjct: 76  -GHNCCCGW---VTDDNWSVKAIRRKTTGTGRMRYLRHLPRRFKSGFREGTEAAPRKKGA 122

Query: 139 AASA 143
           AA+A
Sbjct: 136 AATA 122

[Close]

BLAST of ClCG09G002030 vs. NCBI nr
Match: PPD93922.1 (hypothetical protein GOBAR_DD09073 [Gossypium barbadense])

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-21
Identity = 69/115 (60.00%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 22  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSF 81
           RER + VLV+ G RP LS  GVAA ASISR     PVLSLLL           G  L   
Sbjct: 3   REREQGVLVKEGTRPTLSALGVAAVASISRGAVALPVLSLLLVR---------GHSLNLR 62

Query: 82  NASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNK 137
             +LLW    +  NWSVKAIRRKTTGTG+MRYLR+VPRRFK+GFR+GTEAAPR K
Sbjct: 63  GIALLW----DSDNWSVKAIRRKTTGTGKMRYLRHVPRRFKTGFREGTEAAPRKK 104

[Close]

BLAST of ClCG09G002030 vs. ExPASy Swiss-Prot
Match: Q43292 (60S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17
Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 0


Query: 94  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA 143
           +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFR+GTEA PRNKG A+SA
Sbjct: 47  YNWSVKAIRRKTTGTGRMRYLRNVPRRFKTGFREGTEAKPRNKGVASSA 95

[Close]

BLAST of ClCG09G002030 vs. ExPASy Swiss-Prot
Match: Q8LEM8 (60S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-16
Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = 0


Query: 94  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA 143
           +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFR+GTEA PR+K +A+SA
Sbjct: 47  YNWSVKAIRRKTTGTGRMRYLRNVPRRFKTGFREGTEAKPRSKASASSA 95

[Close]

BLAST of ClCG09G002030 vs. ExPASy Swiss-Prot
Match: P49212 (60S ribosomal protein L37 (Fragment) OS=Solanum lycopersicum OX=4081 GN=RPL37 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.1e-16
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 94  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA 143
           +NWSVKA+RRKTTGTGRMRYLRNVPRRFK+ FR+GTEAAPR KG AA++
Sbjct: 16  YNWSVKALRRKTTGTGRMRYLRNVPRRFKTNFREGTEAAPRKKGTAAAS 64

[Close]

BLAST of ClCG09G002030 vs. ExPASy Swiss-Prot
Match: Q8LFH7 (60S ribosomal protein L37-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.0e-16
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 94  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA 143
           +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+ FR+GT+A PRNK AA+S+
Sbjct: 47  YNWSVKAIRRKTTGTGRMRYLRNVPRRFKTCFREGTQATPRNKAAASSS 95

[Close]

BLAST of ClCG09G002030 vs. ExPASy Swiss-Prot
Match: Q9VXX8 (Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster OX=7227 GN=RpL37a PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.7e-09
Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 94  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAA 140
           +NWSVKA RRKTTGTGRM++L+ V RRF++GFR+GT+A P+   A+
Sbjct: 47  YNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPKKAVAS 92

[Close]

BLAST of ClCG09G002030 vs. ExPASy TrEMBL
Match: A0A5B6X6B2 (60S ribosomal protein L37-3 OS=Gossypium australe OX=47621 GN=rpl37 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-22
Identity = 71/121 (58.68%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 22  RERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSF 81
           RER + VLV+ G RP LS   VAA ASISRR    PVLSLLL                  
Sbjct: 3   REREQGVLVKEGTRPTLSALDVAAVASISRRAVALPVLSLLLVRG--------------- 62

Query: 82  NASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAAS 141
                     +V+NWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFR+GTEAAPR K AAAS
Sbjct: 63  ----------HVNNWSVKAIRRKTTGTGRMRYLRHVPRRFKTGFREGTEAAPRKKVAAAS 98

Query: 142 A 143
           A
Sbjct: 123 A 98

[Close]

BLAST of ClCG09G002030 vs. ExPASy TrEMBL
Match: A0A6A1W379 (60S ribosomal protein L37 OS=Morella rubra OX=262757 GN=CJ030_MR3G026447 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.7e-22
Identity = 74/124 (59.68%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 19  LIYRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCL 78
           LI R R +  LVRGG RP     GVAAAASISRRVA  PV   L A              
Sbjct: 16  LISRVREQGALVRGGTRPTPFALGVAAAASISRRVAAPPVPIPLPAR------------- 75

Query: 79  FSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGA 138
              N    W   V   NWSVKAIRRKTTGTGRMRYLR++PRRFKSGFR+GTEAAPR KGA
Sbjct: 76  -GHNCCCGW---VTDDNWSVKAIRRKTTGTGRMRYLRHLPRRFKSGFREGTEAAPRKKGA 122

Query: 139 AASA 143
           AA+A
Sbjct: 136 AATA 122

[Close]

BLAST of ClCG09G002030 vs. ExPASy TrEMBL
Match: A0A5C7IJ18 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_003994 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 71/124 (57.26%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 21  YRERVRAVLVRGGIRPILSVCGVAAAASISRRV-AVQPVLSLLLASENID-LNRLFGLCL 80
           YRER + VLVRGG R  L V   A AASI RRV A+   + LL     I+ +N   G  +
Sbjct: 139 YREREQVVLVRGGTRHTLCVFVAAVAASIFRRVDALLVPIPLLAREHEIEYVNSRVGFII 198

Query: 81  FSFNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGA 140
                          +NWSVKAIRRKTTGTGRM+YLRNVPRRFKSGFR+GTEAAPR KGA
Sbjct: 199 --------------EYNWSVKAIRRKTTGTGRMKYLRNVPRRFKSGFREGTEAAPRKKGA 248

Query: 141 AASA 143
           AA+A
Sbjct: 259 AAAA 248

[Close]

BLAST of ClCG09G002030 vs. ExPASy TrEMBL
Match: A0A7J7G630 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_027298 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 4.5e-18
Identity = 67/122 (54.92%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 21  YRERVRAVLVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFS 80
           +RE+ R    RGG R   S   VAA A ISRRV    V   LLA  ++ +++        
Sbjct: 4   FREKEREASGRGGTRLTRSASDVAAEAFISRRVDALLVPFPLLAKGHVYVSKEM------ 63

Query: 81  FNASLLWICLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAA 140
             A +L        NWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFR+GTEAAPR KGAAA
Sbjct: 64  TEARIL-------DNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAAA 112

Query: 141 SA 143
           ++
Sbjct: 124 TS 112

[Close]

BLAST of ClCG09G002030 vs. ExPASy TrEMBL
Match: A0A2P5XZ09 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12065 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.0e-17
Identity = 61/114 (53.51%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 29  LVRGGIRPILSVCGVAAAASISRRVAVQPVLSLLLASENIDLNRLFGLCLFSFNASLLWI 88
           L R G R ILS   V   ASIS+R     V  L  ASEN++L+  + + +F F       
Sbjct: 36  LEREGTRLILSAFDVDVEASISKRAVAVLVAILPAASENLNLDEGWQIKVFFF------- 95

Query: 89  CLVNVHNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA 143
             +++ NWS+KAIRRKTTGTGRMRYLR+VPRRFK+GFR+GTEAAPR K A A++
Sbjct: 96  --LDLDNWSMKAIRRKTTGTGRMRYLRHVPRRFKTGFREGTEAAPRKKAAVAAS 140

[Close]

BLAST of ClCG09G002030 vs. TAIR 10
Match: AT1G52300.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 90.9 bits (224), Expect = 8.9e-19
Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 0


Query: 94  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA 143
           +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFR+GTEA PRNKG A+SA
Sbjct: 47  YNWSVKAIRRKTTGTGRMRYLRNVPRRFKTGFREGTEAKPRNKGVASSA 95

[Close]

BLAST of ClCG09G002030 vs. TAIR 10
Match: AT3G16080.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-17
Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = 0


Query: 94  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA 143
           +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFR+GTEA PR+K +A+SA
Sbjct: 47  YNWSVKAIRRKTTGTGRMRYLRNVPRRFKTGFREGTEAKPRSKASASSA 95

[Close]

BLAST of ClCG09G002030 vs. TAIR 10
Match: AT1G15250.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 84.7 bits (208), Expect = 6.4e-17
Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 94  HNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFRDGTEAAPRNKGAAASA 143
           +NWSVKAIRRKTTGTGRMRYLRNVPRRFK+ FR+GT+A PRNK AA+S+
Sbjct: 47  YNWSVKAIRRKTTGTGRMRYLRNVPRRFKTCFREGTQATPRNKAAASSS 95

The following BLAST results are available for this feature:

BLAST of ClCG09G002030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025798.1	5.1e-32	70.40	60S ribosomal protein L37-2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
PPD83667.1	1.6e-22	62.81	hypothetical protein GOBAR_DD19392 [Gossypium barbadense]	[more]
KAA3489293.1	3.6e-22	58.68	60S ribosomal protein L37-3 [Gossypium australe]	[more]
KAB1218567.1	1.4e-21	59.68	60S ribosomal protein L37 [Morella rubra]	[more]
PPD93922.1	3.1e-21	60.00	hypothetical protein GOBAR_DD09073 [Gossypium barbadense]	[more]

BLAST of ClCG09G002030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43292	1.3e-17	87.76	60S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2	[more]
Q8LEM8	1.8e-16	83.67	60S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1	[more]
P49212	3.1e-16	81.63	60S ribosomal protein L37 (Fragment) OS=Solanum lycopersicum OX=4081 GN=RPL37 PE...	[more]
Q8LFH7	9.0e-16	81.63	60S ribosomal protein L37-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37A PE=3 SV=1	[more]
Q9VXX8	3.7e-09	63.04	Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster OX=7227 GN=RpL37...	[more]

BLAST of ClCG09G002030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5B6X6B2	1.8e-22	58.68	60S ribosomal protein L37-3 OS=Gossypium australe OX=47621 GN=rpl37 PE=4 SV=1	[more]
A0A6A1W379	6.7e-22	59.68	60S ribosomal protein L37 OS=Morella rubra OX=262757 GN=CJ030_MR3G026447 PE=4 SV...	[more]
A0A5C7IJ18	1.6e-20	57.26	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_003994 PE=4 SV=1	[more]
A0A7J7G630	4.5e-18	54.92	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_027298 PE=4 SV=1	[more]
A0A2P5XZ09	1.0e-17	53.51	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12065 PE=4 SV...	[more]

BLAST of ClCG09G002030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52300.1	8.9e-19	87.76	Zinc-binding ribosomal protein family protein	[more]
AT3G16080.1	1.3e-17	83.67	Zinc-binding ribosomal protein family protein	[more]
AT1G15250.1	6.4e-17	81.63	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011331	Ribosomal protein L37ae/L37e	GENE3D	2.20.25.30		coord: 90..134 e-value: 5.6E-18 score: 66.9
None	No IPR available	PANTHER	PTHR10768:SF32	BNAA01G28230D PROTEIN	coord: 93..142
None	No IPR available	PANTHER	PTHR10768	60S RIBOSOMAL PROTEIN L37	coord: 93..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G002030.2	ClCG09G002030.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome