ClCG08G014680 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G014680
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	thioredoxin H1-like
Location	CG_Chr08: 27452030 .. 27454353 (+)
RNA-Seq Expression	ClCG08G014680
Synteny	ClCG08G014680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGTTGCGGTTTTTGATACGGAGAATATTTCTTTGCAGAAAAGCGATTTCCGTTTAAACCAATGGGTGAAGAAGGTCAAGTTATTGCATGCCATAAGCAACCTGAATGGGAAGCTCTATTAGCCAAAGCCAAGGAATCTGGAAAACTGGTTCGTTCTTCACATCATTTTCTACATTATTTCGATCGATTCCCCTGGAATTTTGAAATTTCACGTTCTTTGATTCCATTGACTTTTCTCTTTTTCCCTGGTAGGAGATTGATCAATGTCTTGGTATATATATAAGTCGCGATGGATTAGCTAGGGTTTCTGGTCTCTTTAGCTAGTTTATATATTCGATTTATCTAGATTGAATATTGATGGTGTTGAAATTGATGAATCTTTTGATCGATTTGTATTCCTCATGATCTCAATCCTTCTCCGTTACGCTTTTCGTTCTTTTAGTAAGAATTTGAACTTTGATTGTGCTATTTTGCGTTAAACAAACTTCTCACTGGTTCAGTATTACATTTTGTGTTCATTTTTTATGTTCATGATGTTTAGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTGATAGGCTGTGGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTGCAATCGCTCCATATTTCACAGAATTGGCTAAGAATAATCCCAGTGTCATTTTCCTGAAAGTGGACGTCGATGAATTGAATGTAAACATATTTAACCTTTCTATTATATCTTATTTCCAACAGTTCTGTTCCCAGGGATATTGTTGAATACACAGTAGCATGCCAATGGAGGCTGTTTTCTTTTTGACTTGATCCACCCTTTTTCCTTTCTTAAACAATGGATTCTGTTTCTCTCTGCAGGCTGTTGCTAGCAAGTGGGACATTAATGCAATGCCGACGTTCGTTTTTCTGAAAGGAGGGGAAATAGTTCACAAGATTGTTGGTGCTGATAAAGCGGCGCTGTTGAAGAAAATAGAAGAGCTCAAAACTCCAACAGCTGCTACTACTTCTACTGCTTAGATAAGTCAGCTTGGAGGA

mRNA sequence

ATCGTTGCGGTTTTTGATACGGAGAATATTTCTTTGCAGAAAAGCGATTTCCGTTTAAACCAATGGGTGAAGAAGGTCAAGTTATTGCATGCCATAAGCAACCTGAATGGGAAGCTCTATTAGCCAAAGCCAAGGAATCTGGAAAACTGGCTGTGGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTGCAATCGCTCCATATTTCACAGAATTGGCTAAGAATAATCCCAGTGTCATTTTCCTGAAAGTGGACGTCGATGAATTGAATGCTGTTGCTAGCAAGTGGGACATTAATGCAATGCCGACGTTCGTTTTTCTGAAAGGAGGGGAAATAGTTCACAAGATTGTTGGTGCTGATAAAGCGGCGCTGTTGAAGAAAATAGAAGAGCTCAAAACTCCAACAGCTGCTACTACTTCTACTGCTTAGATAAGTCAGCTTGGAGGA

Coding sequence (CDS)

ATGGGTGAAGAAGGTCAAGTTATTGCATGCCATAAGCAACCTGAATGGGAAGCTCTATTAGCCAAAGCCAAGGAATCTGGAAAACTGGCTGTGGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTGCAATCGCTCCATATTTCACAGAATTGGCTAAGAATAATCCCAGTGTCATTTTCCTGAAAGTGGACGTCGATGAATTGAATGCTGTTGCTAGCAAGTGGGACATTAATGCAATGCCGACGTTCGTTTTTCTGAAAGGAGGGGAAATAGTTCACAAGATTGTTGGTGCTGATAAAGCGGCGCTGTTGAAGAAAATAGAAGAGCTCAAAACTCCAACAGCTGCTACTACTTCTACTGCTTAG

Protein sequence

MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVIFLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTSTA

Homology

[Close]

BLAST of ClCG08G014680 vs. NCBI nr
Match: XP_038886211.1 (thioredoxin H-type-like [Benincasa hispida])

HSP 1 Score: 224.6 bits (571), Expect = 4.8e-55
Identity = 108/122 (88.52%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           MGEEGQVIACHKQPEWEALLAK KESGKL VVDFTASWCGPCR IAPYF+ELAKN+P VI
Sbjct: 1   MGEEGQVIACHKQPEWEALLAKGKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVI 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 120
           FLKVDVDELN VAS+W INAMPTFVF+KGGE VHKIVGADK ALLKK+EELKTPTAA TS
Sbjct: 61  FLKVDVDELNTVASEWKINAMPTFVFVKGGETVHKIVGADKGALLKKLEELKTPTAAATS 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of ClCG08G014680 vs. NCBI nr
Match: XP_008444759.1 (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 219.2 bits (557), Expect = 2.0e-53
Identity = 105/122 (86.07%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           MGEEGQVIACHKQ EW+ALLAKAKESGKL VVDFTASWCGPCR IAPYF+ELAKN+P V+
Sbjct: 1   MGEEGQVIACHKQSEWDALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHPGVM 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 120
           FLKVDVDELNA+AS+W INAMPTFVF+KGGE +HKIVGAD+AALLKKIEELKT TAA TS
Sbjct: 61  FLKVDVDELNAIASEWKINAMPTFVFVKGGETLHKIVGADRAALLKKIEELKTSTAAATS 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of ClCG08G014680 vs. NCBI nr
Match: XP_023537338.1 (thioredoxin H-type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52
Identity = 104/122 (85.25%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           M EEGQVIACHK+ EW+A LAKAKESGKL VVDFTASWCGPCRAIAPYF+ELAKN+P V+
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRAIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 120
           FLKVDVDELN VA++W+INAMPTFVF+K GE VHKIVGADK+ALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of ClCG08G014680 vs. NCBI nr
Match: XP_023002551.1 (thioredoxin H-type-like [Cucurbita maxima])

HSP 1 Score: 215.3 bits (547), Expect = 2.9e-52
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           M EEGQVIACHK+ EW+A LAKAKESGKL VVDFTASWCGPCR IAPYF+ELAKN+P V+
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 120
           FLKVDVDELN VA++W+INAMPTFVF+K GE VHKIVGADK+ALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of ClCG08G014680 vs. NCBI nr
Match: XP_022951328.1 (thioredoxin H-type-like [Cucurbita moschata] >KAG6585569.1 hypothetical protein SDJN03_18302, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.2 bits (539), Expect = 2.5e-51
Identity = 101/121 (83.47%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           M EEGQVIACHK+ EW+A LAKAKESGKL VVDFTASWCGPCR IAPYF+ELAKN+P V+
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 120
           FLKVDVDELN VA++W+INAMPTFVF+K GE VHKIVGADK+ALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

Query: 121 T 122
           +
Sbjct: 121 S 121

[Close]

BLAST of ClCG08G014680 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-32
Identity = 68/106 (64.15%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 3   EEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVIFL 62
           EEGQVIACH    W   L KA ES  L VVDFTASWCGPCR IAP+F +LAK  P+V+FL
Sbjct: 4   EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFL 63

Query: 63  KVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKI 109
           KVD DEL +VAS W I AMPTF+FLK G+I+ K+VGA K  L   I
Sbjct: 64  KVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of ClCG08G014680 vs. ExPASy Swiss-Prot
Match: Q96419 (Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-31
Identity = 66/108 (61.11%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           M EE QVIACH   EW     KAK+SGKL V+DFTASWCGPCR I PY +ELAK  P V 
Sbjct: 1   MAEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVA 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKI 109
           F KVDVD+L  VA ++ + AMP+FV LK G+ V +IVGA K  LL KI
Sbjct: 61  FFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKI 108

[Close]

BLAST of ClCG08G014680 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-31
Identity = 66/118 (55.93%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 3   EEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVIFL 62
           EEG VIACH + E++A + KAKE+GK+ ++DFTASWCGPCR IAP F E AK  P  +FL
Sbjct: 4   EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFL 63

Query: 63  KVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 121
           KVDVDEL  VA K+++ AMPTF+F+K G    K+VGA K  L   I +    TAA+ S
Sbjct: 64  KVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASAS 121

[Close]

BLAST of ClCG08G014680 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-31
Identity = 66/118 (55.93%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 3   EEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVIFL 62
           EEG VIACH + E++A + KAKE+GK+ ++DFTASWCGPCR IAP F E AK  P  +FL
Sbjct: 4   EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFL 63

Query: 63  KVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 121
           KVDVDEL  VA K+++ AMPTF+F+K G    K+VGA K  L   I +    TAA+ S
Sbjct: 64  KVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASAS 121

[Close]

BLAST of ClCG08G014680 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.8e-31
Identity = 64/116 (55.17%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 3   EEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVIFL 62
           EEGQV  CHK  EW     K  E+ KL VVDFTASWCGPCR IAP   ++AK  P VIFL
Sbjct: 10  EEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFL 69

Query: 63  KVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAAT 119
           KVDVDEL  V+++W + AMPTFVF+K G+ V ++VGA K  L + I +   P   T
Sbjct: 70  KVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPATVT 125

[Close]

BLAST of ClCG08G014680 vs. ExPASy TrEMBL
Match: A0A1S3BB48 (thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103488007 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.7e-54
Identity = 105/122 (86.07%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           MGEEGQVIACHKQ EW+ALLAKAKESGKL VVDFTASWCGPCR IAPYF+ELAKN+P V+
Sbjct: 1   MGEEGQVIACHKQSEWDALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHPGVM 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 120
           FLKVDVDELNA+AS+W INAMPTFVF+KGGE +HKIVGAD+AALLKKIEELKT TAA TS
Sbjct: 61  FLKVDVDELNAIASEWKINAMPTFVFVKGGETLHKIVGADRAALLKKIEELKTSTAAATS 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of ClCG08G014680 vs. ExPASy TrEMBL
Match: A0A6J1KLL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111496363 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.4e-52
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           M EEGQVIACHK+ EW+A LAKAKESGKL VVDFTASWCGPCR IAPYF+ELAKN+P V+
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 120
           FLKVDVDELN VA++W+INAMPTFVF+K GE VHKIVGADK+ALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of ClCG08G014680 vs. ExPASy TrEMBL
Match: A0A6J1GHE8 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111454193 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 101/121 (83.47%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           M EEGQVIACHK+ EW+A LAKAKESGKL VVDFTASWCGPCR IAPYF+ELAKN+P V+
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 120
           FLKVDVDELN VA++W+INAMPTFVF+K GE VHKIVGADK+ALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

Query: 121 T 122
           +
Sbjct: 121 S 121

[Close]

BLAST of ClCG08G014680 vs. ExPASy TrEMBL
Match: A0A0A0LRK2 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362490 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51
Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           MGEEGQVIACHKQ EWEALLAKAKESGKL VVDFTASWCGPCR IAPYF+ELAKN+  V+
Sbjct: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKT-PTAATT 120
           F+KVDVDELNA+AS+W I AMPTFVF+KGGE VHKIVGAD+AALLKKIEELKT  TAA T
Sbjct: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120

Query: 121 STA 123
           STA
Sbjct: 121 STA 123

[Close]

BLAST of ClCG08G014680 vs. ExPASy TrEMBL
Match: A0A6J1CQU2 (thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111013902 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.2e-45
Identity = 95/122 (77.87%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           M EEGQVIACHK  EWE  L K K+S KL VVDFTASWCGPCRAIAPYFTELAKNNP+V 
Sbjct: 1   MAEEGQVIACHKIDEWEGQLGKWKDSEKLVVVDFTASWCGPCRAIAPYFTELAKNNPNVA 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAATTS 120
           FLKVDVDELN+VASKW+INAMPTFVFLK G+I+ KIVGADK  L KKI EL   T A TS
Sbjct: 61  FLKVDVDELNSVASKWEINAMPTFVFLKKGKIIEKIVGADKVGLSKKILELSGTTPAATS 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of ClCG08G014680 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 140.6 bits (353), Expect = 8.5e-34
Identity = 68/106 (64.15%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 3   EEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVIFL 62
           EEGQVIACH    W   L KA ES  L VVDFTASWCGPCR IAP+F +LAK  P+V+FL
Sbjct: 4   EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFL 63

Query: 63  KVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKI 109
           KVD DEL +VAS W I AMPTF+FLK G+I+ K+VGA K  L   I
Sbjct: 64  KVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of ClCG08G014680 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-31
Identity = 66/107 (61.68%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 3   EEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKN-NPSVIF 62
           EEGQVI CH    W   L KAKES KL V+DFTASWC PCR IAP F +LAK    S IF
Sbjct: 4   EEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIF 63

Query: 63  LKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKI 109
            KVDVDEL +VA ++ + AMPTFVF+K GE+V K+VGA+K  L  KI
Sbjct: 64  FKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKI 110

[Close]

BLAST of ClCG08G014680 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-31
Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           M  EG+VIACH   +W   L  A ES KL V+DFTA+WC PCR IAP F +LAK +  V+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEELKTPTAA 118
           F KVDVDELN VA ++ + AMPTF+F+K GEI   +VGA K  ++  +E+ KT  AA
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAA 117

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BLAST of ClCG08G014680 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 125.6 bits (314), Expect = 2.8e-29
Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 1   MGEEGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVI 60
           M  EG+VIACH    W   +  A ES KL V+DFTASWC PCR IAP F E+AK   +V+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKI 109
           F K+DVDEL AVA ++ + AMPTFVF+K G I+ ++VGA K  + +K+
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108

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BLAST of ClCG08G014680 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 114.0 bits (284), Expect = 8.5e-26
Identity = 49/107 (45.79%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 4   EGQVIACHKQPEWEALLAKAKESGKLAVVDFTASWCGPCRAIAPYFTELAKNNPSVIFLK 63
           +G+VI+ H   E EA    AK++ +L ++ FTA+WCGPCR ++P ++ LA  +  V+FLK
Sbjct: 269 DGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLK 328

Query: 64  VDVDELNAVASKWDINAMPTFVFLKGGEIVHKIVGADKAALLKKIEE 111
           VD+D+ N VA+ W+I+++PTF F++ G+ V K+VGADK +L +KI +
Sbjct: 329 VDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQ 375

The following BLAST results are available for this feature:

BLAST of ClCG08G014680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886211.1	4.8e-55	88.52	thioredoxin H-type-like [Benincasa hispida]	[more]
XP_008444759.1	2.0e-53	86.07	PREDICTED: thioredoxin H1-like [Cucumis melo]	[more]
XP_023537338.1	1.0e-52	85.25	thioredoxin H-type-like [Cucurbita pepo subsp. pepo]	[more]
XP_023002551.1	2.9e-52	84.43	thioredoxin H-type-like [Cucurbita maxima]	[more]
XP_022951328.1	2.5e-51	83.47	thioredoxin H-type-like [Cucurbita moschata] >KAG6585569.1 hypothetical protein ...	[more]

BLAST of ClCG08G014680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29448	1.2e-32	64.15	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q96419	1.3e-31	61.11	Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1	[more]
Q0D840	2.9e-31	55.93	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]
A2YIW7	2.9e-31	55.93	Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1	[more]
P29449	3.8e-31	55.17	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of ClCG08G014680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BB48	9.7e-54	86.07	thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103488007 PE=4 SV=1	[more]
A0A6J1KLL7	1.4e-52	84.43	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111496363 PE=4 SV=1	[more]
A0A6J1GHE8	1.2e-51	83.47	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111454193 PE=4 SV=1	[more]
A0A0A0LRK2	3.5e-51	84.55	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362490...	[more]
A0A6J1CQU2	2.2e-45	77.87	thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111013902 PE=4 SV=1	[more]

BLAST of ClCG08G014680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	8.5e-34	64.15	thioredoxin H-type 1	[more]
AT1G19730.1	1.4e-31	61.68	Thioredoxin superfamily protein	[more]
AT5G42980.1	1.8e-31	53.85	thioredoxin 3	[more]
AT1G45145.1	2.8e-29	53.70	thioredoxin H-type 5	[more]
AT3G17880.1	8.5e-26	45.79	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 38..47 score: 67.0 coord: 77..88 score: 32.92 coord: 30..38 score: 52.22
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..117 e-value: 7.3E-41 score: 141.0
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..113
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..113
None	No IPR available	CDD	cd02947	TRX_family	coord: 20..109 e-value: 5.4733E-36 score: 116.504
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 10..109 e-value: 1.5E-26 score: 92.4
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..113 score: 14.15645
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 6..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G014680.1	ClCG08G014680.1	mRNA