ClCG08G014330 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G014330
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Gibberellin-regulated protein 2
Location	CG_Chr08: 27124542 .. 27125081 (+)
RNA-Seq Expression	ClCG08G014330
Synteny	ClCG08G014330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATCCCTAAAAAACCATGGCCATCCTCTCCAAAGCTCTCATTGCTTCCCTCTTCCTCTCTCTGCTTTTCCTCCACTCTGTAAAATCCTTAAACCACTTTCTTTTTTCTTTTCTTTTTTCTTTTTTATAATTATTTTCTCTTTTGAAATTGCAGGTGGAATCCAACGCCGTGGGTTTAATCCCTCCAAGTCCTCAGAAAATGGGTGATTATAATTTTTAATTTTGTTTTTATTGGTATTAAATTCATTTATTGTAATTTATCAGCTTAAAATTTTAAACTCTAGACTGCGGCGGCGCGTGTGCTGGGAGGTGCAAGTTGTCGTCGAGGCCGAGGCTGTGCAATAGAGCGTGTGGGACGTGCTGTCAGCGTTGCAACTGCGTTCCGCCGGGGACTTCCGGTAACCACCATCTCTGCCCCTGCTACGCCGCCATGACCACCCACGGTGGCCGCCTGAAGTGCCCTTAAAGTGCCGTTGACCGTTGACCACCTCAGTAGATTATCATAAACTCGTTCTCTCTCTCTCTCTCTCTCTCTCTC

mRNA sequence

CAAAATCCCTAAAAAACCATGGCCATCCTCTCCAAAGCTCTCATTGCTTCCCTCTTCCTCTCTCTGCTTTTCCTCCACTCTGTGGAATCCAACGCCGTGGGTTTAATCCCTCCAAGTCCTCAGAAAATGGACTGCGGCGGCGCGTGTGCTGGGAGGTGCAAGTTGTCGTCGAGGCCGAGGCTGTGCAATAGAGCGTGTGGGACGTGCTGTCAGCGTTGCAACTGCGTTCCGCCGGGGACTTCCGGTAACCACCATCTCTGCCCCTGCTACGCCGCCATGACCACCCACGGTGGCCGCCTGAAGTGCCCTTAAAGTGCCGTTGACCGTTGACCACCTCAGTAGATTATCATAAACTCGTTCTCTCTCTCTCTCTCTCTCTCTCTC

Coding sequence (CDS)

ATGGCCATCCTCTCCAAAGCTCTCATTGCTTCCCTCTTCCTCTCTCTGCTTTTCCTCCACTCTGTGGAATCCAACGCCGTGGGTTTAATCCCTCCAAGTCCTCAGAAAATGGACTGCGGCGGCGCGTGTGCTGGGAGGTGCAAGTTGTCGTCGAGGCCGAGGCTGTGCAATAGAGCGTGTGGGACGTGCTGTCAGCGTTGCAACTGCGTTCCGCCGGGGACTTCCGGTAACCACCATCTCTGCCCCTGCTACGCCGCCATGACCACCCACGGTGGCCGCCTGAAGTGCCCTTAA

Protein sequence

MAILSKALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

Homology

[Close]

BLAST of ClCG08G014330 vs. NCBI nr
Match: XP_038886089.1 (snakin-2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 193.4 bits (490), Expect = 9.4e-46
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRAC 60
          M+  SKALIASLFLSLLFLHSVESN VGLIPPSPQKMDCGGACAGRC+LSSR RLCNRAC
Sbjct: 1  MSFFSKALIASLFLSLLFLHSVESNGVGLIPPSPQKMDCGGACAGRCRLSSRQRLCNRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          GTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 GTCCRRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97

[Close]

BLAST of ClCG08G014330 vs. NCBI nr
Match: XP_038886088.1 (snakin-2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 188.3 bits (477), Expect = 3.0e-44
Identity = 90/99 (90.91%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHS--VESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNR 60
          M+  SKALIASLFLSLLFLHS  VESN VGLIPPSPQKMDCGGACAGRC+LSSR RLCNR
Sbjct: 1  MSFFSKALIASLFLSLLFLHSVKVESNGVGLIPPSPQKMDCGGACAGRCRLSSRQRLCNR 60

Query: 61 ACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          ACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 ACGTCCRRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 99

[Close]

BLAST of ClCG08G014330 vs. NCBI nr
Match: XP_023002563.1 (snakin-2-like [Cucurbita maxima])

HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41
Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRAC 60
          MAI SKALIASL LSLLFLHSVES    ++ PSPQKMDCGGACA RC+LSSRPRLC+RAC
Sbjct: 1  MAISSKALIASLLLSLLFLHSVESIGAAMVSPSPQKMDCGGACAARCRLSSRPRLCHRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          GTCCQRCNCVPPGTSGNHHLCPCYA++TTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYASLTTHGGRLKCP 97

[Close]

BLAST of ClCG08G014330 vs. NCBI nr
Match: XP_008444802.1 (PREDICTED: snakin-2-like [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-41
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRAC 60
          M+IL+KAL ASL LSLLFLH VES+ VGL+P SPQKMDC GAC  RC LSSRPRLCNRAC
Sbjct: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97

[Close]

BLAST of ClCG08G014330 vs. NCBI nr
Match: XP_022951559.1 (snakin-2-like [Cucurbita moschata] >KAG6585544.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020456.1 Snakin-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178.7 bits (452), Expect = 2.4e-41
Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRAC 60
          MAI SKALIASL LSLLFLHSVES    ++ PSPQKMDCGGACA RC+LSSRPRLC+RAC
Sbjct: 1  MAISSKALIASLLLSLLFLHSVESIGAAMVSPSPQKMDCGGACAARCRLSSRPRLCHRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          GTCCQRCNCVPPGTSGNHH+CPCYA++TTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHMCPCYASLTTHGGRLKCP 97

[Close]

BLAST of ClCG08G014330 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-31
Identity = 67/102 (65.69%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 4   LSKALIASLFLSLLFLHSVE--------SNAVGLIPPSPQKMDCGGACAGRCKLSSRPRL 63
           +SKAL ASL LSLL L  V+        SNA+     S +K+DCGGACA RC+LSSRPRL
Sbjct: 3   ISKALFASLLLSLLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRPRL 62

Query: 64  CNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
           CNRACGTCC RCNCVPPGTSGN   CPCYA++TTHG + KCP
Sbjct: 63  CNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of ClCG08G014330 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-27
Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 4  LSKALIASLFLSLLFLHSVESNAVGLIPPS--PQKMDCGGACAGRCKLSSRPRLCNRACG 63
          +SKALIASL +SLL L  V+++       +   +K+DCG AC  RC+LS RPRLC+RACG
Sbjct: 3  ISKALIASLLISLLVLQLVQADVENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACG 62

Query: 64 TCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          TCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Sbjct: 63 TCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of ClCG08G014330 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.9e-26
Identity = 59/102 (57.84%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 1  MAILSKALIASLFLSL-----LFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRL 60
          MAI    L+  L L       L +H+ E + VG       K+DCGG C GRC  SSRP L
Sbjct: 1  MAIFRSTLVLLLILFCLTTFELHVHAAEDSQVG---EGVVKIDCGGRCKGRCSKSSRPNL 60

Query: 61 CNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          C RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGRLKCP
Sbjct: 61 CLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99

[Close]

BLAST of ClCG08G014330 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24
Identity = 54/92 (58.70%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 6  KALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRACGTCCQ 65
          + L+ASL +SLL L  V ++ V        K+DC   C  RC LSSRP LC+RACGTCC 
Sbjct: 5  RVLLASLLISLLVLDFVHADMV--TSNDAPKIDCNSRCQERCSLSSRPNLCHRACGTCCA 64

Query: 66 RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Sbjct: 65 RCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of ClCG08G014330 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.2e-24
Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAV--GLIPPSPQKMDCGGACAGRCKLSSRPRLCNR 60
          MA+    L+  L +  L  + +  +A     +     K+DCGG C  RC  SSR +LC R
Sbjct: 1  MAVFRSTLVLLLIIVCLTTYELHVHAADGAKVGEGVVKIDCGGRCKDRCSKSSRTKLCLR 60

Query: 61 ACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          AC +CC RCNCVPPGTSGN HLCPCYA++TTHGGRLKCP
Sbjct: 61 ACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

[Close]

BLAST of ClCG08G014330 vs. ExPASy TrEMBL
Match: A0A6J1KTY1 (snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496372 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.8e-42
Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRAC 60
          MAI SKALIASL LSLLFLHSVES    ++ PSPQKMDCGGACA RC+LSSRPRLC+RAC
Sbjct: 1  MAISSKALIASLLLSLLFLHSVESIGAAMVSPSPQKMDCGGACAARCRLSSRPRLCHRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          GTCCQRCNCVPPGTSGNHHLCPCYA++TTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYASLTTHGGRLKCP 97

[Close]

BLAST of ClCG08G014330 vs. ExPASy TrEMBL
Match: A0A1S3BBY7 (snakin-2-like OS=Cucumis melo OX=3656 GN=LOC103488041 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.9e-42
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRAC 60
          M+IL+KAL ASL LSLLFLH VES+ VGL+P SPQKMDC GAC  RC LSSRPRLCNRAC
Sbjct: 1  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97

[Close]

BLAST of ClCG08G014330 vs. ExPASy TrEMBL
Match: A0A6J1GJ50 (snakin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111454338 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRAC 60
          MAI SKALIASL LSLLFLHSVES    ++ PSPQKMDCGGACA RC+LSSRPRLC+RAC
Sbjct: 1  MAISSKALIASLLLSLLFLHSVESIGAAMVSPSPQKMDCGGACAARCRLSSRPRLCHRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          GTCCQRCNCVPPGTSGNHH+CPCYA++TTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHMCPCYASLTTHGGRLKCP 97

[Close]

BLAST of ClCG08G014330 vs. ExPASy TrEMBL
Match: A0A0A0LNS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368260 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.4e-41
Identity = 82/97 (84.54%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRAC 60
          M IL+K L ASL LSLLFLH VESN VGL+PP+P++MDC GAC  RC LSSRPRLCNRAC
Sbjct: 1  MFILTKPLFASLLLSLLFLHFVESNGVGLLPPNPRRMDCRGACTRRCTLSSRPRLCNRAC 60

Query: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Sbjct: 61 GTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 97

[Close]

BLAST of ClCG08G014330 vs. ExPASy TrEMBL
Match: A0A6J1CRW3 (snakin-2-like OS=Momordica charantia OX=3673 GN=LOC111014004 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 78/109 (71.56%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MAILSKALIAS--LFLSLLFLHS---------VES-NAVGLIPPSPQKMDCGGACAGRCK 60
           M++ SK LI +  L  SLLFLH+         VES +  G+ P +P KMDCGGACAGRC+
Sbjct: 1   MSMFSKVLIVASLLLFSLLFLHAAADDHPALQVESVDQAGISPSTPYKMDCGGACAGRCR 60

Query: 61  LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
           LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGR KCP
Sbjct: 61  LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRPKCP 109

[Close]

BLAST of ClCG08G014330 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-28
Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 4  LSKALIASLFLSLLFLHSVESNAVGLIPPS--PQKMDCGGACAGRCKLSSRPRLCNRACG 63
          +SKALIASL +SLL L  V+++       +   +K+DCG AC  RC+LS RPRLC+RACG
Sbjct: 3  ISKALIASLLISLLVLQLVQADVENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACG 62

Query: 64 TCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          TCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Sbjct: 63 TCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of ClCG08G014330 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 122.1 bits (305), Expect = 2.5e-28
Identity = 59/95 (62.11%), Postives = 71/95 (74.74%), Query Frame = 0


Query: 4  LSKALIASLFLSLLFLHSVESNAVGLIPPS-PQKMDCGGACAGRCKLSSRPRLCNRACGT 63
          +SKALIASL +SLL L  V+++          +K+DCG AC  RC+LS RPRLC+RACGT
Sbjct: 3  ISKALIASLLISLLVLQLVQADENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGT 62

Query: 64 CCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          CC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Sbjct: 63 CCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 97

[Close]

BLAST of ClCG08G014330 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27
Identity = 59/102 (57.84%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 1  MAILSKALIASLFLSL-----LFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRL 60
          MAI    L+  L L       L +H+ E + VG       K+DCGG C GRC  SSRP L
Sbjct: 1  MAIFRSTLVLLLILFCLTTFELHVHAAEDSQVG---EGVVKIDCGGRCKGRCSKSSRPNL 60

Query: 61 CNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          C RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGRLKCP
Sbjct: 61 CLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99

[Close]

BLAST of ClCG08G014330 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 113.6 bits (283), Expect = 8.8e-26
Identity = 54/92 (58.70%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 6  KALIASLFLSLLFLHSVESNAVGLIPPSPQKMDCGGACAGRCKLSSRPRLCNRACGTCCQ 65
          + L+ASL +SLL L  V ++ V        K+DC   C  RC LSSRP LC+RACGTCC 
Sbjct: 5  RVLLASLLISLLVLDFVHADMV--TSNDAPKIDCNSRCQERCSLSSRPNLCHRACGTCCA 64

Query: 66 RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Sbjct: 65 RCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of ClCG08G014330 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 111.3 bits (277), Expect = 4.4e-25
Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 1  MAILSKALIASLFLSLLFLHSVESNAV--GLIPPSPQKMDCGGACAGRCKLSSRPRLCNR 60
          MA+    L+  L +  L  + +  +A     +     K+DCGG C  RC  SSR +LC R
Sbjct: 1  MAVFRSTLVLLLIIVCLTTYELHVHAADGAKVGEGVVKIDCGGRCKDRCSKSSRTKLCLR 60

Query: 61 ACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP 98
          AC +CC RCNCVPPGTSGN HLCPCYA++TTHGGRLKCP
Sbjct: 61 ACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

The following BLAST results are available for this feature:

BLAST of ClCG08G014330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886089.1	9.4e-46	92.78	snakin-2-like isoform X2 [Benincasa hispida]	[more]
XP_038886088.1	3.0e-44	90.91	snakin-2-like isoform X1 [Benincasa hispida]	[more]
XP_023002563.1	1.4e-41	85.57	snakin-2-like [Cucurbita maxima]	[more]
XP_008444802.1	1.8e-41	86.60	PREDICTED: snakin-2-like [Cucumis melo]	[more]
XP_022951559.1	2.4e-41	84.54	snakin-2-like [Cucurbita moschata] >KAG6585544.1 Snakin-2, partial [Cucurbita ar...	[more]

BLAST of ClCG08G014330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93X17	1.4e-31	65.69	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46689	1.6e-27	61.46	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
P46687	3.9e-26	57.84	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]
F4IQJ4	1.2e-24	58.70	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
P46688	6.2e-24	53.54	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]

BLAST of ClCG08G014330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTY1	6.8e-42	85.57	snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496372 PE=3 SV=1	[more]
A0A1S3BBY7	8.9e-42	86.60	snakin-2-like OS=Cucumis melo OX=3656 GN=LOC103488041 PE=3 SV=1	[more]
A0A6J1GJ50	1.2e-41	84.54	snakin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111454338 PE=3 SV=1	[more]
A0A0A0LNS5	3.4e-41	84.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368260 PE=3 SV=1	[more]
A0A6J1CRW3	1.0e-34	71.56	snakin-2-like OS=Momordica charantia OX=3673 GN=LOC111014004 PE=3 SV=1	[more]

BLAST of ClCG08G014330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75750.1	1.1e-28	61.46	GAST1 protein homolog 1	[more]
AT1G75750.2	2.5e-28	62.11	GAST1 protein homolog 1	[more]
AT4G09600.1	2.7e-27	57.84	GAST1 protein homolog 3	[more]
AT2G18420.1	8.8e-26	58.70	Gibberellin-regulated family protein	[more]
AT4G09610.1	4.4e-25	53.54	GAST1 protein homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 38..97 e-value: 3.0E-22 score: 78.5
None	No IPR available	PANTHER	PTHR23201:SF67	SNAKIN-2-LIKE	coord: 8..97
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 8..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G014330.1	ClCG08G014330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050896	response to stimulus