ClCG08G013410 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G013410
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Auxin-responsive protein
Location	CG_Chr08: 26237621 .. 26239177 (-)
RNA-Seq Expression	ClCG08G013410
Synteny	ClCG08G013410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCATCCCCTTCTCATTTTCCCATCCTTTTTCCACAACTCAACCTATCCCCTTCTCTCTCTTTTCATTTTCCCTCTTATTCCCTTTAAAGCTTCTCTTTTCCATTTCAAAATCCCAACCTAACATGGAGCTTCAACTTGGCCTCTCTCTTCCCCTTCATAACCACCCCATCCATTGCAACCCTCCTACTTCCAAAGATCCACCCATTATTGGAAACGATCACCTAATTCCTCAAACTTTGCCTTTACTGTCTTGGAATGATAAGCCTAAGGATGAAGAAGACCCCCACCACCCTAGAGGAACACATTTTCGCAACATTCAGAAGTGAGTCCATACTAAAACAACTATCCTCTTATACTCTCTATTTAATCATCCAAGACTACGTACATATATATATGACAATTACCTCCTGTCAAAAACCATCTCGATGTTGGAAGTTTTAAAATGTTTAACGCCACATTTTGACCAAAACATTAGAAATTGGTTTGATATATAGATTTTTTCTTCTTTCTATTTCCCATCTGTCCTAATTTCTCCTAGCAAAAGTTTTTCTCTTGATACCAGTACTGTTGTGTCAACCTAAGGAAGCAATCGATACAAGACTAATTAGCACCGAGGTTGTGCCACAATTACTTTCAAAGTCGTGATCATTTCAAATCATCAATAATTTATTTTTAGTATACGGTCGCTTAGTTATCTCATATTTGAACAAATCTAGCCCAATGATTTAACAATGTCGTTTTATTTATGTCACTAAATTATATAGGAAAGATGAAGAGAAGAACCAAGCAATGGGATGGCCACCCATTGAGTCATGGAGGAAGAAGGCCCTTCATTGGGATCCACAACCGCCACAGACGGCAGAGAATCGCCGTCGCCGTCCTGTAGTTGCAGATGAAAGTAACCAAAATGGTGGACAAAATTCATTGTTCGTGAAAGTGAAAATGGAAGGGGTAGCAATAGCAAGGAAACTCGATTTAAGGCTCTATCACTCCCATCAATCTCTCAAAATTGCTATCATCGCCATGTTCGCCACATGTAATTCTAAATTACCCCATTTTTAAATCTTTTTTTAATTCACAATGACTCCATTAAGCCCTCCACTAATTTAAATTAATCATATGTTTGTTGTAACATGACAGATAAGGCAATTGATCACAACGGTTGGGATTTTACGTTGATCTATGAAGACCGAGATGGTGATTGGATTCTTGCAGAAGATCTTCCATGGAAGTGCGTTCTTAAATTCCGTTTGTTTCCTTTCTCCACTTTTTTTTTTTTTTTTTTTTCCCTTTTCTCTGATGTTTTATTTATTTATTTATTTGCAGTTCCTTTGTCGAGTCTGTACAGCGCCTCAAGATTCTAGTTCGAAAGAGAAACAAAGAATGAAGTTTGCATATAGTATTATTATTATTTCCGAATCTTAATATTCCACATATATTATATTATAAGTGGCATAATGTTGGTACTTCCATATTGCAAATATTATAAATATTTTCGTTGCTGCTAAGTGTGGAGCTATGTGATCGAAATTATTCAATAAAAAGTTGTTTGGG

mRNA sequence

TCCTCATCCCCTTCTCATTTTCCCATCCTTTTTCCACAACTCAACCTATCCCCTTCTCTCTCTTTTCATTTTCCCTCTTATTCCCTTTAAAGCTTCTCTTTTCCATTTCAAAATCCCAACCTAACATGGAGCTTCAACTTGGCCTCTCTCTTCCCCTTCATAACCACCCCATCCATTGCAACCCTCCTACTTCCAAAGATCCACCCATTATTGGAAACGATCACCTAATTCCTCAAACTTTGCCTTTACTGTCTTGGAATGATAAGCCTAAGGATGAAGAAGACCCCCACCACCCTAGAGGAACACATTTTCGCAACATTCAGAAGAAAGATGAAGAGAAGAACCAAGCAATGGGATGGCCACCCATTGAGTCATGGAGGAAGAAGGCCCTTCATTGGGATCCACAACCGCCACAGACGGCAGAGAATCGCCGTCGCCGTCCTGTAGTTGCAGATGAAAGTAACCAAAATGGTGGACAAAATTCATTGTTCGTGAAAGTGAAAATGGAAGGGGTAGCAATAGCAAGGAAACTCGATTTAAGGCTCTATCACTCCCATCAATCTCTCAAAATTGCTATCATCGCCATGTTCGCCACATATAAGGCAATTGATCACAACGGTTGGGATTTTACGTTGATCTATGAAGACCGAGATGGTGATTGGATTCTTGCAGAAGATCTTCCATGGAATTCCTTTGTCGAGTCTGTACAGCGCCTCAAGATTCTAGTTCGAAAGAGAAACAAAGAATGAAGTTTGCATATAGTATTATTATTATTTCCGAATCTTAATATTCCACATATATTATATTATAAGTGGCATAATGTTGGTACTTCCATATTGCAAATATTATAAATATTTTCGTTGCTGCTAAGTGTGGAGCTATGTGATCGAAATTATTCAATAAAAAGTTGTTTGGG

Coding sequence (CDS)

ATGGAGCTTCAACTTGGCCTCTCTCTTCCCCTTCATAACCACCCCATCCATTGCAACCCTCCTACTTCCAAAGATCCACCCATTATTGGAAACGATCACCTAATTCCTCAAACTTTGCCTTTACTGTCTTGGAATGATAAGCCTAAGGATGAAGAAGACCCCCACCACCCTAGAGGAACACATTTTCGCAACATTCAGAAGAAAGATGAAGAGAAGAACCAAGCAATGGGATGGCCACCCATTGAGTCATGGAGGAAGAAGGCCCTTCATTGGGATCCACAACCGCCACAGACGGCAGAGAATCGCCGTCGCCGTCCTGTAGTTGCAGATGAAAGTAACCAAAATGGTGGACAAAATTCATTGTTCGTGAAAGTGAAAATGGAAGGGGTAGCAATAGCAAGGAAACTCGATTTAAGGCTCTATCACTCCCATCAATCTCTCAAAATTGCTATCATCGCCATGTTCGCCACATATAAGGCAATTGATCACAACGGTTGGGATTTTACGTTGATCTATGAAGACCGAGATGGTGATTGGATTCTTGCAGAAGATCTTCCATGGAATTCCTTTGTCGAGTCTGTACAGCGCCTCAAGATTCTAGTTCGAAAGAGAAACAAAGAATGA

Protein sequence

MELQLGLSLPLHNHPIHCNPPTSKDPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHPRGTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVADESNQNGGQNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATYKAIDHNGWDFTLIYEDRDGDWILAEDLPWNSFVESVQRLKILVRKRNKE

Homology

[Close]

BLAST of ClCG08G013410 vs. NCBI nr
Match: XP_038886196.1 (auxin-responsive protein IAA29-like [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 5.7e-93
Identity = 173/208 (83.17%), Postives = 184/208 (88.46%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPIHCNPPTSKDPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHPRGT 60
           MELQLGL LP HNHP   + P  +DP IIGN   +PQTLPLLSWNDKPKD++DP HPRGT
Sbjct: 1   MELQLGLPLPFHNHPNIHHKPAFQDPFIIGNQ--LPQTLPLLSWNDKPKDQDDPPHPRGT 60

Query: 61  HFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVADE-SNQNGGQN 120
           HF NIQKKDEEK +A+GWPPIESWRKK  HW PQPPQTAEN  RRPVVAD+ SNQN GQN
Sbjct: 61  HFSNIQKKDEEKKEAVGWPPIESWRKKVFHWQPQPPQTAEN--RRPVVADQSSNQNDGQN 120

Query: 121 SLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATYKAIDHNGWDFTLIYEDRDGDW 180
           SLFVKVKMEGVAIARKLDLRLYHSHQSLK A+IAMF TYKAIDHNGWDFT+IYED+DGDW
Sbjct: 121 SLFVKVKMEGVAIARKLDLRLYHSHQSLKTALIAMFTTYKAIDHNGWDFTIIYEDQDGDW 180

Query: 181 ILAEDLPWNSFVESVQRLKILVRKRNKE 208
           ILAEDLPWNSFVESVQRLKILVRKRNKE
Sbjct: 181 ILAEDLPWNSFVESVQRLKILVRKRNKE 204

[Close]

BLAST of ClCG08G013410 vs. NCBI nr
Match: XP_008445232.2 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo] >KAA0064917.1 auxin-responsive protein IAA29-like [Cucumis melo var. makuwa])

HSP 1 Score: 334.0 bits (855), Expect = 9.5e-88
Identity = 164/210 (78.10%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHP-IHCNPPTS-KDPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHPR 60
           MELQLGLSLPLHNHP IHC P    +  P+   ++ +PQTLPLLSWNDKPKDE+DPHHP+
Sbjct: 1   MELQLGLSLPLHNHPNIHCKPAGGFEHHPLFVIENELPQTLPLLSWNDKPKDEDDPHHPK 60

Query: 61  GTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVAD-ESNQNGG 120
           GTHF NIQKKDEEK QA+GWPPIESWRKKA HW  QPPQT +N  RRP+VAD +SNQNGG
Sbjct: 61  GTHFCNIQKKDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDN--RRPIVADHQSNQNGG 120

Query: 121 QNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATYKAIDHNGWDFTLIYEDRDG 180
           QNSLFVKVKMEGVAIARKLDL+LYHSH SLK A+I MF T K +D+N WDFTLIYED DG
Sbjct: 121 QNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDEDG 180

Query: 181 DWILAEDLPWNSFVESVQRLKILVRKRNKE 208
           DW+LAEDLPWNSFVES QRLKILVRKRNKE
Sbjct: 181 DWMLAEDLPWNSFVESAQRLKILVRKRNKE 208

[Close]

BLAST of ClCG08G013410 vs. NCBI nr
Match: XP_004138851.1 (auxin-responsive protein IAA29 [Cucumis sativus] >KGN62959.1 hypothetical protein Csa_022378 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 2.2e-84
Identity = 161/210 (76.67%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHP-IHCNPPTSK--DPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHP 60
           MELQLGLSLPLH+HP IHC P   +  D   I  + L PQTLPLLSWNDKPKDE+DPHHP
Sbjct: 1   MELQLGLSLPLHSHPNIHCKPAGGRFGDHSFILENEL-PQTLPLLSWNDKPKDEDDPHHP 60

Query: 61  RGTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVADESNQNGG 120
           RGTHF NIQKKDEEK QA+GWPPIESWRKKA  W  QPPQT EN  RRP VAD+SNQNGG
Sbjct: 61  RGTHFCNIQKKDEEKKQAVGWPPIESWRKKAFDWHTQPPQTIEN--RRPAVADQSNQNGG 120

Query: 121 QNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATYKAIDHNGWDFTLIYEDRDG 180
           +NSLFVKVKMEGVAIARKLDL+LYHSH SLK A++ MF T K +D++ WDFTLIYED DG
Sbjct: 121 RNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALLTMFTTNKGMDNSDWDFTLIYEDEDG 180

Query: 181 DWILAEDLPWNSFVESVQRLKILVRKRNKE 208
           DW+LAEDLPWNSFVES QRLKILV  RNKE
Sbjct: 181 DWMLAEDLPWNSFVESAQRLKILVGNRNKE 207

[Close]

BLAST of ClCG08G013410 vs. NCBI nr
Match: KAG6598565.1 (Auxin-induced protein AUX28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.2 bits (744), Expect = 7.1e-75
Identity = 150/209 (71.77%), Postives = 167/209 (79.90%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPIHCNPPTSKDPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHPRGT 60
           MELQLGLSLPLHN+ +        + P IGN+  +PQTLPLLSWNDKPKD++   H  GT
Sbjct: 1   MELQLGLSLPLHNYAL--------EHPRIGNE--LPQTLPLLSWNDKPKDDDGSPHAGGT 60

Query: 61  HFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVADESNQNGGQNS 120
           HF  IQK+DEEKN ++GWPPIE+WRKKAL   PQPPQT ENR         SNQNGG NS
Sbjct: 61  HFSTIQKEDEEKNPSVGWPPIETWRKKALLQHPQPPQTVENR---------SNQNGGPNS 120

Query: 121 LFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFAT--YKAIDHNGWDFTLIYEDRDGD 180
           LFVKVKMEGVAIARKLDLRLYHSH SLK A+IAMF T  Y+AID+ GWDFTLIYED DGD
Sbjct: 121 LFVKVKMEGVAIARKLDLRLYHSHNSLKTALIAMFTTSNYEAIDNKGWDFTLIYEDEDGD 180

Query: 181 WILAEDLPWNSFVESVQRLKILVRKRNKE 208
           W+LAEDLPWNSFVESV+RLK+LVRKRNKE
Sbjct: 181 WLLAEDLPWNSFVESVRRLKVLVRKRNKE 190

[Close]

BLAST of ClCG08G013410 vs. NCBI nr
Match: XP_022962174.1 (auxin-responsive protein IAA29-like [Cucurbita moschata])

HSP 1 Score: 290.8 bits (743), Expect = 9.2e-75
Identity = 150/209 (71.77%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPIHCNPPTSKDPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHPRGT 60
           MELQLGLSLPLHN+          + P IGN+  +PQTLPLLSWNDKPKD++   HP GT
Sbjct: 1   MELQLGLSLPLHNYAF--------EHPRIGNE--LPQTLPLLSWNDKPKDDDGSPHPEGT 60

Query: 61  HFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVADESNQNGGQNS 120
           HF  IQK+DEEKN ++GWPPIE+WRKKAL   PQPPQT ENR         SNQNGG NS
Sbjct: 61  HFSTIQKEDEEKNPSVGWPPIETWRKKALLQHPQPPQTVENR---------SNQNGGPNS 120

Query: 121 LFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFAT--YKAIDHNGWDFTLIYEDRDGD 180
           LFVKVKMEGVAIARKLDLRLYHSH SLK A+IAMF T  Y+AID+  WDFTLIYED DGD
Sbjct: 121 LFVKVKMEGVAIARKLDLRLYHSHNSLKTALIAMFTTSNYEAIDNKCWDFTLIYEDEDGD 180

Query: 181 WILAEDLPWNSFVESVQRLKILVRKRNKE 208
           W+LAEDLPWNSFVESV+RLK+LVRKRNKE
Sbjct: 181 WLLAEDLPWNSFVESVRRLKVLVRKRNKE 190

[Close]

BLAST of ClCG08G013410 vs. ExPASy Swiss-Prot
Match: A2XLV9 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.7e-21
Identity = 56/157 (35.67%), Postives = 90/157 (57.32%), Query Frame = 0


Query: 52  EDPHHPRGTHFRNIQKKDEEKNQAMGWPPIESWRKKAL---HWDPQPPQTAENRRRRPVV 111
           E    P      + +K    K QA+GWPP+ S+R+  +       +  + A+ ++++P  
Sbjct: 64  EKAKRPAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPA- 123

Query: 112 ADESNQNGGQNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATYKAIDH----- 171
              +N +G  +S FVKV M+G    RK+DL++Y+S++ L +A+  MF T+ A  +     
Sbjct: 124 ---ANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMNEV 183

Query: 172 NGWDFTLIYEDRDGDWILAEDLPWNSFVESVQRLKIL 201
           NG D    YED+DGDW+L  D+PW  FVES +RL+I+
Sbjct: 184 NGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIM 216

[Close]

BLAST of ClCG08G013410 vs. ExPASy Swiss-Prot
Match: Q10D34 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.7e-21
Identity = 56/157 (35.67%), Postives = 90/157 (57.32%), Query Frame = 0


Query: 52  EDPHHPRGTHFRNIQKKDEEKNQAMGWPPIESWRKKAL---HWDPQPPQTAENRRRRPVV 111
           E    P      + +K    K QA+GWPP+ S+R+  +       +  + A+ ++++P  
Sbjct: 64  EKAKRPAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPA- 123

Query: 112 ADESNQNGGQNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATYKAIDH----- 171
              +N +G  +S FVKV M+G    RK+DL++Y+S++ L +A+  MF T+ A  +     
Sbjct: 124 ---ANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMNEV 183

Query: 172 NGWDFTLIYEDRDGDWILAEDLPWNSFVESVQRLKIL 201
           NG D    YED+DGDW+L  D+PW  FVES +RL+I+
Sbjct: 184 NGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIM 216

[Close]

BLAST of ClCG08G013410 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 9.7e-19
Identity = 53/179 (29.61%), Postives = 96/179 (53.63%), Query Frame = 0


Query: 41  LLSWNDKPKDEEDPHHPRGTHFRNIQKKDEEKNQAMGWPPIE-------SWRKKALHWDP 100
           L + N +P +E++   P  +    +   +EE ++ +GWPP++       S+  + +    
Sbjct: 63  LFALNGQPNEEDE--DPLESESSIVYDDEEENSEVVGWPPVKTCMIKYGSYHHRHIRNHH 122

Query: 101 QPPQTAENRR------------RRPVVADESNQNGGQNSLFVKVKMEGVAIARKLDLRLY 160
             P     RR               V +  S+    ++S++VKVKM+GVAIARK+D++L+
Sbjct: 123 HCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDIKLF 182

Query: 161 HSHQSLKIAIIAMFATYKAIDHNGWDFTLIYEDRDGDWILAEDLPWNSFVESVQRLKIL 201
           +S++SL  ++I MF  Y+  D    ++T  ++ ++GDW+L  D+ W  F ESV R+ I+
Sbjct: 183 NSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISII 239

[Close]

BLAST of ClCG08G013410 vs. ExPASy Swiss-Prot
Match: P93830 (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 59/202 (29.21%), Postives = 96/202 (47.52%), Query Frame = 0


Query: 27  PIIGNDHLIPQTLPL-LSWNDKPKDEEDPHHPRGTHFRNIQK--------KDEEKNQAMG 86
           P+ GN     +T+ L L+ N++P ++E         F + +K        K   K Q +G
Sbjct: 26  PVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFDSKEKSACPKDPAKPPAKAQVVG 85

Query: 87  WPPIESWRKKALHWDPQPPQTAENRRRRPVVADESNQNGGQNSLFVKVKMEGVAIARKLD 146
           WPP+ S+RK  +                  V+ + +  G + + FVKV M+G    RK+D
Sbjct: 86  WPPVRSYRKNVM------------------VSCQKSSGGPEAAAFVKVSMDGAPYLRKID 145

Query: 147 LRLYHSHQSLKIAIIAMFATYKAIDH-------------------NGWDFTLIYEDRDGD 201
           LR+Y S+  L  A+  MF+++    H                   N WD+   YED+DGD
Sbjct: 146 LRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGD 205

[Close]

BLAST of ClCG08G013410 vs. ExPASy Swiss-Prot
Match: P13089 (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-17
Identity = 54/154 (35.06%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 68  KDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVADESNQNGGQNSLFVKVKM 127
           K   K Q +GWPP+ S+RK  L               +  V +ES +N   N+ FVKV M
Sbjct: 84  KPPAKTQVVGWPPVRSFRKNML-------------AVQKSVGEESEKNSSPNASFVKVSM 143

Query: 128 EGVAIARKLDLRLYHSHQSLKIAIIAMFATY-----------------KAID-HNGWDFT 187
           +G    RK+DL++Y S++ L  ++  MF+++                 K  D  N  D+ 
Sbjct: 144 DGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYV 203

Query: 188 LIYEDRDGDWILAEDLPWNSFVESVQRLKILVRK 204
             YED+DGDW+L  D+PW  FVES +RL+I+  K
Sbjct: 204 PTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGK 224

[Close]

BLAST of ClCG08G013410 vs. ExPASy TrEMBL
Match: A0A5A7VD13 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002350 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.6e-88
Identity = 164/210 (78.10%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHP-IHCNPPTS-KDPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHPR 60
           MELQLGLSLPLHNHP IHC P    +  P+   ++ +PQTLPLLSWNDKPKDE+DPHHP+
Sbjct: 1   MELQLGLSLPLHNHPNIHCKPAGGFEHHPLFVIENELPQTLPLLSWNDKPKDEDDPHHPK 60

Query: 61  GTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVAD-ESNQNGG 120
           GTHF NIQKKDEEK QA+GWPPIESWRKKA HW  QPPQT +N  RRP+VAD +SNQNGG
Sbjct: 61  GTHFCNIQKKDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDN--RRPIVADHQSNQNGG 120

Query: 121 QNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATYKAIDHNGWDFTLIYEDRDG 180
           QNSLFVKVKMEGVAIARKLDL+LYHSH SLK A+I MF T K +D+N WDFTLIYED DG
Sbjct: 121 QNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDEDG 180

Query: 181 DWILAEDLPWNSFVESVQRLKILVRKRNKE 208
           DW+LAEDLPWNSFVES QRLKILVRKRNKE
Sbjct: 181 DWMLAEDLPWNSFVESAQRLKILVRKRNKE 208

[Close]

BLAST of ClCG08G013410 vs. ExPASy TrEMBL
Match: A0A1S3BCX7 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488319 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.6e-88
Identity = 164/210 (78.10%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHP-IHCNPPTS-KDPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHPR 60
           MELQLGLSLPLHNHP IHC P    +  P+   ++ +PQTLPLLSWNDKPKDE+DPHHP+
Sbjct: 1   MELQLGLSLPLHNHPNIHCKPAGGFEHHPLFVIENELPQTLPLLSWNDKPKDEDDPHHPK 60

Query: 61  GTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVAD-ESNQNGG 120
           GTHF NIQKKDEEK QA+GWPPIESWRKKA HW  QPPQT +N  RRP+VAD +SNQNGG
Sbjct: 61  GTHFCNIQKKDEEKKQAVGWPPIESWRKKAFHWHTQPPQTIDN--RRPIVADHQSNQNGG 120

Query: 121 QNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATYKAIDHNGWDFTLIYEDRDG 180
           QNSLFVKVKMEGVAIARKLDL+LYHSH SLK A+I MF T K +D+N WDFTLIYED DG
Sbjct: 121 QNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDEDG 180

Query: 181 DWILAEDLPWNSFVESVQRLKILVRKRNKE 208
           DW+LAEDLPWNSFVES QRLKILVRKRNKE
Sbjct: 181 DWMLAEDLPWNSFVESAQRLKILVRKRNKE 208

[Close]

BLAST of ClCG08G013410 vs. ExPASy TrEMBL
Match: A0A0A0LPM6 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G381840 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 161/210 (76.67%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHP-IHCNPPTSK--DPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHP 60
           MELQLGLSLPLH+HP IHC P   +  D   I  + L PQTLPLLSWNDKPKDE+DPHHP
Sbjct: 1   MELQLGLSLPLHSHPNIHCKPAGGRFGDHSFILENEL-PQTLPLLSWNDKPKDEDDPHHP 60

Query: 61  RGTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVADESNQNGG 120
           RGTHF NIQKKDEEK QA+GWPPIESWRKKA  W  QPPQT EN  RRP VAD+SNQNGG
Sbjct: 61  RGTHFCNIQKKDEEKKQAVGWPPIESWRKKAFDWHTQPPQTIEN--RRPAVADQSNQNGG 120

Query: 121 QNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATYKAIDHNGWDFTLIYEDRDG 180
           +NSLFVKVKMEGVAIARKLDL+LYHSH SLK A++ MF T K +D++ WDFTLIYED DG
Sbjct: 121 RNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALLTMFTTNKGMDNSDWDFTLIYEDEDG 180

Query: 181 DWILAEDLPWNSFVESVQRLKILVRKRNKE 208
           DW+LAEDLPWNSFVES QRLKILV  RNKE
Sbjct: 181 DWMLAEDLPWNSFVESAQRLKILVGNRNKE 207

[Close]

BLAST of ClCG08G013410 vs. ExPASy TrEMBL
Match: A0A6J1HG86 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462707 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.5e-75
Identity = 150/209 (71.77%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 1   MELQLGLSLPLHNHPIHCNPPTSKDPPIIGNDHLIPQTLPLLSWNDKPKDEEDPHHPRGT 60
           MELQLGLSLPLHN+          + P IGN+  +PQTLPLLSWNDKPKD++   HP GT
Sbjct: 1   MELQLGLSLPLHNYAF--------EHPRIGNE--LPQTLPLLSWNDKPKDDDGSPHPEGT 60

Query: 61  HFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVADESNQNGGQNS 120
           HF  IQK+DEEKN ++GWPPIE+WRKKAL   PQPPQT ENR         SNQNGG NS
Sbjct: 61  HFSTIQKEDEEKNPSVGWPPIETWRKKALLQHPQPPQTVENR---------SNQNGGPNS 120

Query: 121 LFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFAT--YKAIDHNGWDFTLIYEDRDGD 180
           LFVKVKMEGVAIARKLDLRLYHSH SLK A+IAMF T  Y+AID+  WDFTLIYED DGD
Sbjct: 121 LFVKVKMEGVAIARKLDLRLYHSHNSLKTALIAMFTTSNYEAIDNKCWDFTLIYEDEDGD 180

Query: 181 WILAEDLPWNSFVESVQRLKILVRKRNKE 208
           W+LAEDLPWNSFVESV+RLK+LVRKRNKE
Sbjct: 181 WLLAEDLPWNSFVESVRRLKVLVRKRNKE 190

[Close]

BLAST of ClCG08G013410 vs. ExPASy TrEMBL
Match: A0A6J1K2I8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491815 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.6e-61
Identity = 124/168 (73.81%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 42  LSWNDKPKDEEDPHHPRGTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAEN 101
           LSWNDKPKD++D  HP GTHF  IQK+D+EKN ++GWPPIE+WRKKAL   PQPP   EN
Sbjct: 25  LSWNDKPKDDDDSPHPGGTHFSTIQKEDDEKNPSVGWPPIETWRKKALLQHPQPP--LEN 84

Query: 102 RRRRPVVADESNQNGGQNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMF--ATYK 161
           R         SNQNGG NSLFVKVKMEGVAIARKLDLRLYHSH SLK A+IAMF  + Y+
Sbjct: 85  R---------SNQNGGPNSLFVKVKMEGVAIARKLDLRLYHSHNSLKTALIAMFTASNYE 144

Query: 162 AIDHNGWDFTLIYEDRDGDWILAEDLPWNSFVESVQRLKILVRKRNKE 208
           AID+  WDFTLIYED DGDW+LAEDLPWNSFVESV+RLK+LVRKRNKE
Sbjct: 145 AIDNKCWDFTLIYEDEDGDWLLAEDLPWNSFVESVRRLKVLVRKRNKE 181

[Close]

BLAST of ClCG08G013410 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 )

HSP 1 Score: 95.1 bits (235), Expect = 6.9e-20
Identity = 53/179 (29.61%), Postives = 96/179 (53.63%), Query Frame = 0


Query: 41  LLSWNDKPKDEEDPHHPRGTHFRNIQKKDEEKNQAMGWPPIE-------SWRKKALHWDP 100
           L + N +P +E++   P  +    +   +EE ++ +GWPP++       S+  + +    
Sbjct: 63  LFALNGQPNEEDE--DPLESESSIVYDDEEENSEVVGWPPVKTCMIKYGSYHHRHIRNHH 122

Query: 101 QPPQTAENRR------------RRPVVADESNQNGGQNSLFVKVKMEGVAIARKLDLRLY 160
             P     RR               V +  S+    ++S++VKVKM+GVAIARK+D++L+
Sbjct: 123 HCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDIKLF 182

Query: 161 HSHQSLKIAIIAMFATYKAIDHNGWDFTLIYEDRDGDWILAEDLPWNSFVESVQRLKIL 201
           +S++SL  ++I MF  Y+  D    ++T  ++ ++GDW+L  D+ W  F ESV R+ I+
Sbjct: 183 NSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISII 239

[Close]

BLAST of ClCG08G013410 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 94.7 bits (234), Expect = 9.0e-20
Identity = 59/202 (29.21%), Postives = 96/202 (47.52%), Query Frame = 0


Query: 27  PIIGNDHLIPQTLPL-LSWNDKPKDEEDPHHPRGTHFRNIQK--------KDEEKNQAMG 86
           P+ GN     +T+ L L+ N++P ++E         F + +K        K   K Q +G
Sbjct: 26  PVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFDSKEKSACPKDPAKPPAKAQVVG 85

Query: 87  WPPIESWRKKALHWDPQPPQTAENRRRRPVVADESNQNGGQNSLFVKVKMEGVAIARKLD 146
           WPP+ S+RK  +                  V+ + +  G + + FVKV M+G    RK+D
Sbjct: 86  WPPVRSYRKNVM------------------VSCQKSSGGPEAAAFVKVSMDGAPYLRKID 145

Query: 147 LRLYHSHQSLKIAIIAMFATYKAIDH-------------------NGWDFTLIYEDRDGD 201
           LR+Y S+  L  A+  MF+++    H                   N WD+   YED+DGD
Sbjct: 146 LRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGD 205

[Close]

BLAST of ClCG08G013410 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-18
Identity = 59/171 (34.50%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 51  EEDPHHPRGTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVAD 110
           +E+  H +G     +      K Q +GWPPI S+RK  +        T++N        D
Sbjct: 146 QEERSHAKG----GLNNAPAAKAQVVGWPPIRSYRKNTM-----ASSTSKN-------TD 205

Query: 111 ESNQNGGQNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATY------------ 170
           E +   G   LFVKV M+G    RK+DLR Y S+Q L  A+  MF+ +            
Sbjct: 206 EVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQG 265

Query: 171 ---------KAIDHNGWDFTLIYEDRDGDWILAEDLPWNSFVESVQRLKIL 201
                    K + H G +F L YED+DGDW+L  D+PW  F E+ Q+LKI+
Sbjct: 266 RERMSEIKLKDLLH-GSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIM 299

[Close]

BLAST of ClCG08G013410 vs. TAIR 10
Match: AT2G22670.2 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-18
Identity = 59/171 (34.50%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 51  EEDPHHPRGTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVAD 110
           +E+  H +G     +      K Q +GWPPI S+RK  +        T++N        D
Sbjct: 146 QEERSHAKG----GLNNAPAAKAQVVGWPPIRSYRKNTM-----ASSTSKN-------TD 205

Query: 111 ESNQNGGQNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATY------------ 170
           E +   G   LFVKV M+G    RK+DLR Y S+Q L  A+  MF+ +            
Sbjct: 206 EVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQG 265

Query: 171 ---------KAIDHNGWDFTLIYEDRDGDWILAEDLPWNSFVESVQRLKIL 201
                    K + H G +F L YED+DGDW+L  D+PW  F E+ Q+LKI+
Sbjct: 266 RERMSEIKLKDLLH-GSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIM 299

[Close]

BLAST of ClCG08G013410 vs. TAIR 10
Match: AT2G22670.3 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-18
Identity = 59/171 (34.50%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 51  EEDPHHPRGTHFRNIQKKDEEKNQAMGWPPIESWRKKALHWDPQPPQTAENRRRRPVVAD 110
           +E+  H +G     +      K Q +GWPPI S+RK  +        T++N        D
Sbjct: 146 QEERSHAKG----GLNNAPAAKAQVVGWPPIRSYRKNTM-----ASSTSKN-------TD 205

Query: 111 ESNQNGGQNSLFVKVKMEGVAIARKLDLRLYHSHQSLKIAIIAMFATY------------ 170
           E +   G   LFVKV M+G    RK+DLR Y S+Q L  A+  MF+ +            
Sbjct: 206 EVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQG 265

Query: 171 ---------KAIDHNGWDFTLIYEDRDGDWILAEDLPWNSFVESVQRLKIL 201
                    K + H G +F L YED+DGDW+L  D+PW  F E+ Q+LKI+
Sbjct: 266 RERMSEIKLKDLLH-GSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIM 299

The following BLAST results are available for this feature:

BLAST of ClCG08G013410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886196.1	5.7e-93	83.17	auxin-responsive protein IAA29-like [Benincasa hispida]	[more]
XP_008445232.2	9.5e-88	78.10	PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo] >KAA0064917.1 auxi...	[more]
XP_004138851.1	2.2e-84	76.67	auxin-responsive protein IAA29 [Cucumis sativus] >KGN62959.1 hypothetical protei...	[more]
KAG6598565.1	7.1e-75	71.77	Auxin-induced protein AUX28, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022962174.1	9.2e-75	71.77	auxin-responsive protein IAA29-like [Cucurbita moschata]	[more]

BLAST of ClCG08G013410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XLV9	2.7e-21	35.67	Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 P...	[more]
Q10D34	2.7e-21	35.67	Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13...	[more]
Q93WC4	9.7e-19	29.61	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=...	[more]
P93830	1.3e-18	29.21	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=...	[more]
P13089	1.8e-17	35.06	Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1	[more]

BLAST of ClCG08G013410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VD13	4.6e-88	78.10	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BCX7	4.6e-88	78.10	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488319 PE=3 SV=1	[more]
A0A0A0LPM6	1.1e-84	76.67	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G381840 PE=3 SV=1	[more]
A0A6J1HG86	4.5e-75	71.77	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462707 PE=3 SV=1	[more]
A0A6J1K2I8	1.6e-61	73.81	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491815 PE=3 SV=1	[more]

BLAST of ClCG08G013410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32280.1	6.9e-20	29.61	indole-3-acetic acid inducible 29	[more]
AT1G04250.1	9.0e-20	29.21	AUX/IAA transcriptional regulator family protein	[more]
AT2G22670.1	2.9e-18	34.50	indoleacetic acid-induced protein 8	[more]
AT2G22670.2	2.9e-18	34.50	indoleacetic acid-induced protein 8	[more]
AT2G22670.3	2.9e-18	34.50	indoleacetic acid-induced protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 164..200 e-value: 9.2E-13 score: 48.6 coord: 58..159 e-value: 2.0E-20 score: 73.7
None	No IPR available	GENE3D	3.10.20.90		coord: 115..207 e-value: 1.4E-25 score: 91.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..74
None	No IPR available	PANTHER	PTHR31734:SF44	AUXIN-RESPONSIVE PROTEIN IAA29	coord: 36..202
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 113..199
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 36..202
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 120..204 score: 22.199577

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G013410.1	ClCG08G013410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding