ClCG08G006850 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCAGCTTGGGCGGCATACTTAGTGTTTACCATTTTGGTGGCTTCAATTTCTCCAAGCTCGCCGTCGAGAGCTTCAGCCGCCGCAAACTACGCCTACCGTCACTCTTCTCCTCCTCTGCCGCCGCTCCACCGTCAAATAATCCTCTTCAGTCACGACGGCTCTCCCCCACCGTGGCCGCCGTCGAACAAGTCTCCTCTGAAACCATTCCGCCGTCTAAATGCTCAGCGTAAATACAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATCCAGAGAGAAGTCAAGAACCTTGGCCAGAGTGCCCCATCCCAGCATCGCCGCCGCCTCCATTCTAG ATGGCGGCAGCTTGGGCGGCATACTTAGTGTTTACCATTTTGGTGGCTTCAATTTCTCCAAGCTCGCCGTCGAGAGCTTCAGCCGCCGCAAACTACGCCTACCGTCACTCTTCTCCTCCTCTGCCGCCGCTCCACCGTCAAATAATCCTCTTCAGTCACGACGGCTCTCCCCCACCGTGGCCGCCGTCGAACAAGTCTCCTCTGAAACCATTCCGCCGTCTAAATGCTCAGCGTAAATACAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATCCAGAGAGAAGTCAAGAACCTTGGCCAGAGTGCCCCATCCCAGCATCGCCGCCGCCTCCATTCTAG ATGGCGGCAGCTTGGGCGGCATACTTAGTGTTTACCATTTTGGTGGCTTCAATTTCTCCAAGCTCGCCGTCGAGAGCTTCAGCCGCCGCAAACTACGCCTACCGTCACTCTTCTCCTCCTCTGCCGCCGCTCCACCGTCAAATAATCCTCTTCAGTCACGACGGCTCTCCCCCACCGTGGCCGCCGTCGAACAAGTCTCCTCTGAAACCATTCCGCCGTCTAAATGCTCAGCGTAAATACAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATCCAGAGAGAAGTCAAGAACCTTGGCCAGAGTGCCCCATCCCAGCATCGCCGCCGCCTCCATTCTAG MAAAWAAYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF Homology
BLAST of ClCG08G006850 vs. NCBI nr
Match: KAA0054910.1 (hypothetical protein E6C27_scaffold43052G00380 [Cucumis melo var. makuwa] >TYK22698.1 hypothetical protein E5676_scaffold1163G00150 [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 6.9e-16 Identity = 65/112 (58.04%), Postives = 73/112 (65.18%), Query Frame = 0
BLAST of ClCG08G006850 vs. NCBI nr
Match: KAA0054906.1 (hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa] >TYK22694.1 hypothetical protein E5676_scaffold1163G00110 [Cucumis melo var. makuwa]) HSP 1 Score: 68.6 bits (166), Expect = 4.1e-08 Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0
BLAST of ClCG08G006850 vs. NCBI nr
Match: KAE8646677.1 (hypothetical protein Csa_023590, partial [Cucumis sativus]) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07 Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0
BLAST of ClCG08G006850 vs. ExPASy TrEMBL
Match: A0A0A0KCN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058710 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19 Identity = 66/110 (60.00%), Postives = 74/110 (67.27%), Query Frame = 0
BLAST of ClCG08G006850 vs. ExPASy TrEMBL
Match: A0A5A7UHY5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00150 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.3e-16 Identity = 65/112 (58.04%), Postives = 73/112 (65.18%), Query Frame = 0
BLAST of ClCG08G006850 vs. ExPASy TrEMBL
Match: A0A0A0KEF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.0e-09 Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 0
BLAST of ClCG08G006850 vs. ExPASy TrEMBL
Match: A0A5D3DGG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00110 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.0e-08 Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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