ClCG08G004950 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G004950
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	zinc finger CCCH domain-containing protein 1
Location	CG_Chr08: 15537549 .. 15540433 (-)
RNA-Seq Expression	ClCG08G004950
Synteny	ClCG08G004950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCATCCAAGTCAGCCACTCCCATTTTCTCTTTACTTCTCTCTTCCCGCGGACACCACCAAACAGATCCCGGCGGCGAATTCTGACTCGCGACGGACACCCGGCAGACAAGTAGATCCGGCCGCGGCGTTGATAGATCCTCGAACGATCAGCAGCGAACGGGAAGACCCGCAGCGAGGCGACCTGTTGATCTGCGATATCCGTAGGCTGCGGTTGCGTGCCACAACCCTAGAAATTGTGCAAATTCCTCCGACGCCCATTTTGATCATAGGAGAGCTTGAGAGATAAGTTAATCCATTGTAGCATCTATTAAACGAGCTGGTCTTACTCTCGTATACAATGGCAGATACAGGTGAAAATCAGCCGCCTGAACAAGGTATTACCCATTTTTGTTTCATCTAATCCCCATTTTCATCATGGGATCTCTTTTTTGTGCTTATAATTTTTTAATTGTAGTCACTCTCTCTATACGTTTTTAATCCTGTGTTCTTCAGTCTGTAGCTTCTTCAGAAAACCCACAAAGAACAAAAACATCAGAAAACGGACGGTTGATGAAGACGAAGAAGATGACTCTAAAACCGAGACTTCGTTGCTTCAAAATCAGAAGAAAGCCCCCAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGACCTTCTAAGAGTTCCTTGTCTAATGAGTCGAATGTGGAACCTGATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATTCGCGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGTAAAGGCAAGAGTTCTGGTAGTGAGAAGTTGTATAAAGGAGTCAATGCGTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCACTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACCGAGTGATGAAGATGAAGAAGATGCCTTGCCCTTCGCTTGTTTTATTTGTCGGGAGCCTTTTGTGGATCCTGTTGTGACCAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTTAAGGTAGTTGCTCTTTCTTGGTCTTACTTGTGTCTTAATTATCTAGGCGTCTTTAATATGGTGATCATGAAGTCCTTTCTTTTCTGGGAGATTGAAATTTGCTTCAGAATTCAAGCCTTGTCTCTTTGTTCTTTGAAATTGACTTACAATAGCATGTTTTCTATAGTAATAAGTCAACTTATGATGTTTTTTGAAATTTAGAAATAACATGTTTTTAAAAATCAGAGGATGTTTTTAAAGTAAGAGAAGAAAGCATTTATAAAAACTTTTCTGAAGATTAATTCAACCTATTTGACCAGGTCTTACCTAAACAGGATCTGTTCTATTGGTTTTTCAACGGTGTCCTTGAGTTCTAAAAAGATACCCACCCATTCGTGTCGTTCTTGCTCGTTACTGTTGCAACTACCCATTATTATTTTTTCTATAAAGGATTTTCCAAGTATATTAAGTATTTTTTATAGAACAGTATATGTTCCAATTATATTTCGTAATTTAAAGGTTTTCCCAGAATGTATAATGGTAAGGGAATGAAATATGGAATGTAGTGAGATGACTGAAGCATTTGGATAATTTTTCTGCAAGTTTGGCGATTGATTCACTGATGTCGATTTTATAATTTGCATGTCTAGAATTCATTTCTGAACTAAGTATATTCTTGATTTGTATCTCAAGCGCACACTTTTAGATGATCATTTCATCCTACTTCATCACAAACTTCATTAATTTTCCTCTTTTCCTGATATTTAATGTTGCATATCTTGTCTTTAGAATGAACCTAAAATCATATTTCTTTTTTAATAAAAATTTGCAGCACCATGCAAAGAATAAGAAATGTTTCGTTTGCAACCAGCCTACACTCGGAATCTTCAACACGGCTCATGAGATACGCAAAAAGATGGCACAAAGTAAATAAGTATTTTCCCTTGATCTGCATTGGTCCCTTACCACAGTATTTCAATTTGTAGCAGGATTATCTTTCTCTTCCTTATTTTTTCTGAGGAATTCCAGTTTCCCATATCTAACATTTTGAAGCTTAAAATCAAGACCCCGTCGTAGCATGAGCTTAGAGAAAGCTTGGATACTATTTCTTGAAATATGGCCATATGGGAAAGGTCATTAAGAAGTAGTTTTGAGAAAAAGAAAACGGCTGTTTTTCTTTTTGTTAAAGTTCCTATCTGAATTGGATGATATGTTCTGTAAATATCCAGAAATCCTTCAAATCTTCCTTAGAGCTAGAAATTGAAAACTACCACTCTGACTATATAACATTTGGCGGCTAGAAGTTCATGAGATAGATAGTATTCAAGGTAGGTAGTGTTTCTATTGTCGTAGTCAACCTTTAGACTGGATGATACCAAGTTATATGCTTGAACATTAGTTTGTCTGTATTTACTACTACTCATTTGCACTTTCCAGAGATTATACAAATATGAGAACAGAAGGAAGCTGCCATTTTACAACTTCGTAAAAGCATGTGTTGAGAATGTCTTTGTTACTTCATTATTTTGTACTTTTGGTGATTGTCTCTGATTATATTGCTCTTGTACCCCATTTCTTGCAACC

mRNA sequence

TCTTCATCCAAGTCAGCCACTCCCATTTTCTCTTTACTTCTCTCTTCCCGCGGACACCACCAAACAGATCCCGGCGGCGAATTCTGACTCGCGACGGACACCCGGCAGACAAGTAGATCCGGCCGCGGCGTTGATAGATCCTCGAACGATCAGCAGCGAACGGGAAGACCCGCAGCGAGGCGACCTGTTGATCTGCGATATCCGTAGGCTGCGGTTGCGTGCCACAACCCTAGAAATTGTGCAAATTCCTCCGACGCCCATTTTGATCATAGGAGAGCTTGAGAGATAAGTTAATCCATTGTAGCATCTATTAAACGAGCTGGTCTTACTCTCGTATACAATGGCAGATACAGGTGAAAATCAGCCGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACAAAGAACAAAAACATCAGAAAACGGACGGTTGATGAAGACGAAGAAGATGACTCTAAAACCGAGACTTCGTTGCTTCAAAATCAGAAGAAAGCCCCCAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGACCTTCTAAGAGTTCCTTGTCTAATGAGTCGAATGTGGAACCTGATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATTCGCGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGTAAAGGCAAGAGTTCTGGTAGTGAGAAGTTGTATAAAGGAGTCAATGCGTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCACTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACCGAGTGATGAAGATGAAGAAGATGCCTTGCCCTTCGCTTGTTTTATTTGTCGGGAGCCTTTTGTGGATCCTGTTGTGACCAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTTAAGCACCATGCAAAGAATAAGAAATGTTTCGTTTGCAACCAGCCTACACTCGGAATCTTCAACACGGCTCATGAGATACGCAAAAAGATGGCACAAAGTAAATAAGTATTTTCCCTTGATCTGCATTGGTCCCTTACCACAGTATTTCAATTTGTAGCAGGATTATCTTTCTCTTCCTTATTTTTTCTGAGGAATTCCAGTTTCCCATATCTAACATTTTGAAGCTTAAAATCAAGACCCCGTCGTAGCATGAGCTTAGAGAAAGCTTGGATACTATTTCTTGAAATATGGCCATATGGGAAAGGTCATTAAGAAGTAGTTTTGAGAAAAAGAAAACGGCTGTTTTTCTTTTTGTTAAAGTTCCTATCTGAATTGGATGATATGTTCTGTAAATATCCAGAAATCCTTCAAATCTTCCTTAGAGCTAGAAATTGAAAACTACCACTCTGACTATATAACATTTGGCGGCTAGAAGTTCATGAGATAGATAGTATTCAAGGTAGGTAGTGTTTCTATTGTCGTAGTCAACCTTTAGACTGGATGATACCAAGTTATATGCTTGAACATTAGTTTGTCTGTATTTACTACTACTCATTTGCACTTTCCAGAGATTATACAAATATGAGAACAGAAGGAAGCTGCCATTTTACAACTTCGTAAAAGCATGTGTTGAGAATGTCTTTGTTACTTCATTATTTTGTACTTTTGGTGATTGTCTCTGATTATATTGCTCTTGTACCCCATTTCTTGCAACC

Coding sequence (CDS)

ATGGCAGATACAGGTGAAAATCAGCCGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACAAAGAACAAAAACATCAGAAAACGGACGGTTGATGAAGACGAAGAAGATGACTCTAAAACCGAGACTTCGTTGCTTCAAAATCAGAAGAAAGCCCCCAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGACCTTCTAAGAGTTCCTTGTCTAATGAGTCGAATGTGGAACCTGATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATTCGCGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGTAAAGGCAAGAGTTCTGGTAGTGAGAAGTTGTATAAAGGAGTCAATGCGTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCACTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACCGAGTGATGAAGATGAAGAAGATGCCTTGCCCTTCGCTTGTTTTATTTGTCGGGAGCCTTTTGTGGATCCTGTTGTGACCAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTTAAGCACCATGCAAAGAATAAGAAATGTTTCGTTTGCAACCAGCCTACACTCGGAATCTTCAACACGGCTCATGAGATACGCAAAAAGATGGCACAAAGTAAATAA

Protein sequence

MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLYFSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK

Homology

[Close]

BLAST of ClCG08G004950 vs. NCBI nr
Match: XP_004149426.1 (zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypothetical protein Csa_018272 [Cucumis sativus])

HSP 1 Score: 619.8 bits (1597), Expect = 1.3e-173
Identity = 308/322 (95.65%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTG+ QP EQVCSFFRKPTKNKNIRKRTVDEDEE+DSK ETS L NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK+S SNESNVEP+KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDTSE SDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEIRK+MAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of ClCG08G004950 vs. NCBI nr
Match: XP_008466746.1 (PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_008466747.1 PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 616.3 bits (1588), Expect = 1.5e-172
Identity = 307/322 (95.34%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTG+ QP EQVCSFFRKPTKNKNIRKRTVDEDEE+DSK ETS L NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK+SLSNESNVEP+KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED+SE SDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEIRKKMAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQSK 322

[Close]

BLAST of ClCG08G004950 vs. NCBI nr
Match: XP_023548600.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548608.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023548618.1 zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >KAG7032517.1 Zinc finger CCCH domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 615.9 bits (1587), Expect = 1.9e-172
Identity = 304/322 (94.41%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTGENQ PEQVCSFF+KPTKNKNIRKRTVDEDEED   +ETS+LQNQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSSETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKS+L+NESNVE DKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +E SDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of ClCG08G004950 vs. NCBI nr
Match: XP_022958735.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 615.9 bits (1587), Expect = 1.9e-172
Identity = 304/322 (94.41%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTGENQ PEQVCSFF+KPTKNKNIRKRTVDEDEE+   TETS+LQNQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKS+L+NESNVE DKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +E SDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of ClCG08G004950 vs. NCBI nr
Match: XP_038884796.1 (zinc finger CCCH domain-containing protein 1 [Benincasa hispida] >XP_038884797.1 zinc finger CCCH domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 614.0 bits (1582), Expect = 7.4e-172
Identity = 310/320 (96.88%), Postives = 312/320 (97.50%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEE  SKTETSLL NQKKAPKTESKLY
Sbjct: 1   MTDTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEE-GSKTETSLLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK+SLSNES  EP+KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNES-AEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDTSE SDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQ 321
           NQPTLGIFNTAHEIRKKMAQ
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQ 318

[Close]

BLAST of ClCG08G004950 vs. ExPASy Swiss-Prot
Match: Q8GX84 (Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g01350 PE=2 SV=2)

HSP 1 Score: 478.0 bits (1229), Expect = 8.3e-134
Identity = 239/339 (70.50%), Postives = 280/339 (82.60%), Query Frame = 0


Query: 1   MADTGENQP----------------PEQVCSFFRKPTKNKNIRKRTVDEDEED-DSKTET 60
           M+D+GE +P                 +QVC+FF+KPTK+KNIRKRT+D DEED DSK+E+
Sbjct: 1   MSDSGEPKPSQQEEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSES 60

Query: 61  SLLQNQKKAPKTESKLYFSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATL 120
           S+LQN KK  K +SKLYFSSGPSKSS +      P++ +F ++SSKEIQV +DS ATATL
Sbjct: 61  SILQNLKKVAKPDSKLYFSSGPSKSSTTTSG--APERSVFHYDSSKEIQVQNDSGATATL 120

Query: 121 ETETDFSRDARAIRERVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSE 180
           ETETDF++DARAIRERVLK+A+EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSE
Sbjct: 121 ETETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSE 180

Query: 181 KAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEK 240
           KAGG+HGPLRASAHIR SARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EK
Sbjct: 181 KAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEK 240

Query: 241 EWEEVEKARKRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFC 300
           EWEE EK RKR  AM  +D D++  + SDED E+ALPFACFICREPFVDPVVTKCKHYFC
Sbjct: 241 EWEEAEKVRKRNKAMGVEDEDDEADKDSDED-ENALPFACFICREPFVDPVVTKCKHYFC 300

Query: 301 EHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 323
           EHCALKHH KNKKCFVCNQPT+GIFN AHEI+K+MA+ +
Sbjct: 301 EHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEER 336

[Close]

BLAST of ClCG08G004950 vs. ExPASy Swiss-Prot
Match: Q9FNG6 (Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=At5g06420 PE=2 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 4.1e-133
Identity = 232/321 (72.27%), Postives = 272/321 (84.74%), Query Frame = 0


Query: 3   DTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEED-DSKTETSLLQNQKKAPKTESKLYF 62
           D   NQ  +QVC+FF+KPTK+KNIRKRT+D DEED DSK+E+S+LQN KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGP     S  ++  P++P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIRKKMAQSK 323
           QPT+GIFN AHEI+K+MA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of ClCG08G004950 vs. ExPASy Swiss-Prot
Match: Q6K4V3 (Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0301000 PE=2 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.4e-117
Identity = 225/332 (67.77%), Postives = 254/332 (76.51%), Query Frame = 0


Query: 2   ADTGENQPPEQVCSFFRKPTKNKNIRKRTV-----DEDEEDDSKTETSLLQNQKKAPKTE 61
           A +G + P   VCSF RKP   KNIRKR       D+D+ED S    +     KKAP + 
Sbjct: 10  AGSGGSAP---VCSFVRKPP--KNIRKRPTAPAGSDDDDEDGSGAIAA--ARAKKAPSST 69

Query: 62  SKLYFSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAI 121
           SKL+FSS    S        EP +  FQ+ESS+ IQ   DSRATATLETET+F RDARAI
Sbjct: 70  SKLFFSSADGSS--------EPRR--FQYESSRTIQASTDSRATATLETETEFDRDARAI 129

Query: 122 RERVLKQAEEALK------GKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHG 181
           RER LKQAEE+LK           SGS ++YKG++ Y DYKAGFRREHT+SSEKAGG+HG
Sbjct: 130 RERQLKQAEESLKKNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREHTVSSEKAGGSHG 189

Query: 182 PLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEK 241
           PLRASAHIR SARFDYQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQ+EKEWEE EK
Sbjct: 190 PLRASAHIRLSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQIEKEWEEAEK 249

Query: 242 ARKRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKH 301
           ARKR++AM  D  D +  E  D+D+E+ALPFAC+ICREPFVDPVVTKCKHYFCEHCALKH
Sbjct: 250 ARKRRIAMGGDGSDYEAGEEDDDDDEEALPFACYICREPFVDPVVTKCKHYFCEHCALKH 309

Query: 302 HAKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 323
           H+KNKKCFVCN+PTLGIFN A EIRKKMAQ K
Sbjct: 310 HSKNKKCFVCNKPTLGIFNAAQEIRKKMAQDK 324

[Close]

BLAST of ClCG08G004950 vs. ExPASy Swiss-Prot
Match: Q67ER4 (E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.8e-49
Identity = 126/330 (38.18%), Postives = 187/330 (56.67%), Query Frame = 0


Query: 11  EQVCSF-FRKPTKN--KNIRKRTVDEDEEDDSKTET----SLLQNQKKAPKTESKLYFSS 70
           +QVC+F F+KP +      RKR +   E  DS + +    ++++ +KK       +  + 
Sbjct: 12  DQVCTFLFKKPGRKVAAGRRKRPICNQESGDSSSSSDEGNTVVRPEKKRAVHNPMIQKTR 71

Query: 71  GPSKSSLS---------NESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDAR 130
           G  K  ++          E+  E    +++   S +     D  ATA  E +T+  RDA+
Sbjct: 72  GSGKQKVAYGDLSSEEEEENKSESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGPL 190
           AI ER  K  EE L+G+      +K+Y+G+N   +Y+   + + T     + G    GP+
Sbjct: 132 AIFERSQKIQEE-LRGQ----EDDKIYRGIN---NYQKFMKPKDTSMGNASSGMVRKGPI 191

Query: 191 RASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKAR 250
           RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E     
Sbjct: 192 RAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGV 251

Query: 251 KRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHA 310
                      DE+    SDE+E   +PF CFICR+ F +PVVTKC+HYFCE CAL+H  
Sbjct: 252 YE---------DENYEVGSDEEE---IPFKCFICRQTFQNPVVTKCRHYFCESCALQHFR 311

Query: 311 KNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 323
              +C+VC+Q T G+FN A E+  K+ + +
Sbjct: 312 TTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of ClCG08G004950 vs. ExPASy Swiss-Prot
Match: O15541 (E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.4e-48
Identity = 128/330 (38.79%), Postives = 190/330 (57.58%), Query Frame = 0


Query: 11  EQVCSF-FRKPTKN--KNIRKRTVDEDEEDDSKTET----SLLQNQKKAPKTESKLYFS- 70
           +QVC+F F+KP +      RKR   + E  +S + +    ++++ +KK       +  + 
Sbjct: 12  DQVCTFLFKKPGRKGAAGRRKRPACDPEPGESGSSSDEGCTVVRPEKKRVTHNPMIQKTR 71

Query: 71  -SGPSKS-----SLSNESNVEPDKPIFQFESSKEIQV--HHDSRATATLETETDFSRDAR 130
            SG  K+     S   E   EP+     ++S++  +     D  ATA  E +T+  RDA+
Sbjct: 72  DSGKQKAAYGDLSSEEEEENEPESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGG--AHGPL 190
           AI ER  K  EE L+GK      +K+Y+G+N Y  Y    + + T     + G    GP+
Sbjct: 132 AIFERSQKIQEE-LRGK----EDDKIYRGINNYQKY---MKPKDTSMGNASSGMVRKGPI 191

Query: 191 RASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKAR 250
           RA  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E     
Sbjct: 192 RAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDE----- 251

Query: 251 KRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHA 310
                 +    +++  E   +DEE  +PF CFICR+ F +PVVTKC+HYFCE CAL+H  
Sbjct: 252 -----GRYGVYEDENYEVGSDDEE--IPFKCFICRQSFQNPVVTKCRHYFCESCALQHFR 311

Query: 311 KNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 323
              +C+VC+Q T G+FN A E+  K+ + +
Sbjct: 312 TTPRCYVCDQQTNGVFNPAKELIAKLEKHR 321

[Close]

BLAST of ClCG08G004950 vs. ExPASy TrEMBL
Match: A0A0A0KFS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 6.5e-174
Identity = 308/322 (95.65%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTG+ QP EQVCSFFRKPTKNKNIRKRTVDEDEE+DSK ETS L NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK+S SNESNVEP+KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDEDTSE SDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEIRK+MAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKRMAQSK 322

[Close]

BLAST of ClCG08G004950 vs. ExPASy TrEMBL
Match: A0A1S3CS03 (zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103504086 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.2e-173
Identity = 307/322 (95.34%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTG+ QP EQVCSFFRKPTKNKNIRKRTVDEDEE+DSK ETS L NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK+SLSNESNVEP+KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED+SE SDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEIRKKMAQSK
Sbjct: 301 NQPTLGIFNTAHEIRKKMAQSK 322

[Close]

BLAST of ClCG08G004950 vs. ExPASy TrEMBL
Match: A0A6J1H4B5 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459918 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 9.4e-173
Identity = 304/322 (94.41%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTGENQ PEQVCSFF+KPTKNKNIRKRTVDEDEE+   TETS+LQNQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKS+L+NESNVE DKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +E SDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC
Sbjct: 241 DDGDEDAAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of ClCG08G004950 vs. ExPASy TrEMBL
Match: A0A6J1I9H7 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111470453 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 6.1e-172
Identity = 303/322 (94.10%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTGENQ PEQVCSFF+KPTKNKNIRKRTVDEDEED   TETS+LQNQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKS+L+NESNVE DKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM+S
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMRS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300
           DDGDED +E SDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK HAKNKKCFVC
Sbjct: 241 DDGDEDVAEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKRHAKNKKCFVC 300

Query: 301 NQPTLGIFNTAHEIRKKMAQSK 323
           NQPTLGIFNTAHEI+KKMA+SK
Sbjct: 301 NQPTLGIFNTAHEIKKKMAESK 322

[Close]

BLAST of ClCG08G004950 vs. ExPASy TrEMBL
Match: A0A6J1BYC6 (zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111006576 PE=4 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 5.7e-170
Identity = 304/323 (94.12%), Postives = 313/323 (96.90%), Query Frame = 0


Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTGENQ PEQVCSFF+KPTKNKNIRKRT+DEDEE+DSKTETSLL NQKKA KTESKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTIDEDEEEDSKTETSLLLNQKKALKTESKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSKSSLSNESNVE DKPIFQFESSKEIQVHHDS+ATATLETET+FSRDARAIRERV
Sbjct: 61  FSSGPSKSSLSNESNVESDKPIFQFESSKEIQVHHDSKATATLETETEFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSE-KLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIR 180
           LKQA+EALKGKGKSSG E KLYKGVNAYVDYKAGFRRE TISSEKAGGAHGPLRASAHIR
Sbjct: 121 LKQADEALKGKGKSSGDEKKLYKGVNAYVDYKAGFRREQTISSEKAGGAHGPLRASAHIR 180

Query: 181 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMK 240
           ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM 
Sbjct: 181 ASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMG 240

Query: 241 SDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFV 300
           SD+GDEDT+E SDEDEEDALPFACFICREPFVDPV+TKCKHYFCEHCALKHHAKNKKCFV
Sbjct: 241 SDEGDEDTAEQSDEDEEDALPFACFICREPFVDPVMTKCKHYFCEHCALKHHAKNKKCFV 300

Query: 301 CNQPTLGIFNTAHEIRKKMAQSK 323
           CNQPTLGIFNTAHEIRKKMAQSK
Sbjct: 301 CNQPTLGIFNTAHEIRKKMAQSK 323

[Close]

BLAST of ClCG08G004950 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 478.0 bits (1229), Expect = 5.9e-135
Identity = 239/339 (70.50%), Postives = 280/339 (82.60%), Query Frame = 0


Query: 1   MADTGENQP----------------PEQVCSFFRKPTKNKNIRKRTVDEDEED-DSKTET 60
           M+D+GE +P                 +QVC+FF+KPTK+KNIRKRT+D DEED DSK+E+
Sbjct: 1   MSDSGEPKPSQQEEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSES 60

Query: 61  SLLQNQKKAPKTESKLYFSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATL 120
           S+LQN KK  K +SKLYFSSGPSKSS +      P++ +F ++SSKEIQV +DS ATATL
Sbjct: 61  SILQNLKKVAKPDSKLYFSSGPSKSSTTTSG--APERSVFHYDSSKEIQVQNDSGATATL 120

Query: 121 ETETDFSRDARAIRERVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSE 180
           ETETDF++DARAIRERVLK+A+EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSE
Sbjct: 121 ETETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSE 180

Query: 181 KAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEK 240
           KAGG+HGPLRASAHIR SARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EK
Sbjct: 181 KAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEK 240

Query: 241 EWEEVEKARKRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFC 300
           EWEE EK RKR  AM  +D D++  + SDED E+ALPFACFICREPFVDPVVTKCKHYFC
Sbjct: 241 EWEEAEKVRKRNKAMGVEDEDDEADKDSDED-ENALPFACFICREPFVDPVVTKCKHYFC 300

Query: 301 EHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 323
           EHCALKHH KNKKCFVCNQPT+GIFN AHEI+K+MA+ +
Sbjct: 301 EHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEER 336

[Close]

BLAST of ClCG08G004950 vs. TAIR 10
Match: AT5G06420.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 475.7 bits (1223), Expect = 2.9e-134
Identity = 232/321 (72.27%), Postives = 272/321 (84.74%), Query Frame = 0


Query: 3   DTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEED-DSKTETSLLQNQKKAPKTESKLYF 62
           D   NQ  +QVC+FF+KPTK+KNIRKRT+D DEED DSK+E+S+LQN KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGP     S  ++  P++P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIRKKMAQSK 323
           QPT+GIFN AHEI+K+MA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of ClCG08G004950 vs. TAIR 10
Match: AT5G06420.2 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 475.7 bits (1223), Expect = 2.9e-134
Identity = 232/321 (72.27%), Postives = 272/321 (84.74%), Query Frame = 0


Query: 3   DTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEED-DSKTETSLLQNQKKAPKTESKLYF 62
           D   NQ  +QVC+FF+KPTK+KNIRKRT+D DEED DSK+E+S+LQN KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGP     S  ++  P++P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALKHH KNKKCFVCN
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 QPTLGIFNTAHEIRKKMAQSK 323
           QPT+GIFN AHEI+K+MA+ +
Sbjct: 357 QPTMGIFNAAHEIKKRMAEER 371

[Close]

BLAST of ClCG08G004950 vs. TAIR 10
Match: AT4G01023.1 (RING/U-box superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-23
Identity = 51/114 (44.74%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 209 MHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICRE 268
           + D        +LEK  ++++K   RKL        E     + E+++DALP AC IC+ 
Sbjct: 40  VEDEDSNNESSRLEKLEKKIKKETARKL--------ETDFVLTGEEDDDALPLACSICQN 99

Query: 269 PFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKKMAQSK 323
           PF+DPVVT C HYFC+ CALKHH +N  CFVCN+PTLG+F+TA EI++++ + +
Sbjct: 100 PFLDPVVTNCNHYFCDKCALKHHTENDTCFVCNEPTLGLFDTAVEIKERIEEER 145

The following BLAST results are available for this feature:

BLAST of ClCG08G004950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149426.1	1.3e-173	95.65	zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypot...	[more]
XP_008466746.1	1.5e-172	95.34	PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_00846...	[more]
XP_023548600.1	1.9e-172	94.41	zinc finger CCCH domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_02...	[more]
XP_022958735.1	1.9e-172	94.41	zinc finger CCCH domain-containing protein 1 [Cucurbita moschata]	[more]
XP_038884796.1	7.4e-172	96.88	zinc finger CCCH domain-containing protein 1 [Benincasa hispida] >XP_038884797.1...	[more]

BLAST of ClCG08G004950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX84	8.3e-134	70.50	Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FNG6	4.1e-133	72.27	Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6K4V3	1.4e-117	67.77	Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX...	[more]
Q67ER4	4.8e-49	38.18	E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1	[more]
O15541	1.4e-48	38.79	E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1	[more]

BLAST of ClCG08G004950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFS0	6.5e-174	95.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1	[more]
A0A1S3CS03	7.2e-173	95.34	zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1H4B5	9.4e-173	94.41	zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I9H7	6.1e-172	94.10	zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1BYC6	5.7e-170	94.12	zinc finger CCCH domain-containing protein 1 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of ClCG08G004950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01350.1	5.9e-135	70.50	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.1	2.9e-134	72.27	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.2	2.9e-134	72.27	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT4G01023.1	2.7e-23	44.74	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 185..212 e-value: 1.8E-7 score: 40.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 186..211 e-value: 6.3E-10 score: 38.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 185..213 score: 14.577143
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 263..300 e-value: 8.2E-5 score: 32.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 263..301 score: 10.571388
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 261..320 e-value: 8.5E-16 score: 59.3
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 262..304 e-value: 5.4E-9 score: 35.8
None	No IPR available	GENE3D	4.10.1000.10		coord: 183..217 e-value: 1.8E-6 score: 29.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..78
None	No IPR available	PANTHER	PTHR12930:SF9	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 1..322
None	No IPR available	CDD	cd16539	RING-HC_RNF113A_B	coord: 261..301 e-value: 6.80597E-25 score: 92.6787
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 262..306
IPR039971	Pre-mRNA-splicing factor CWC24-like	PANTHER	PTHR12930	ZINC FINGER PROTEIN 183	coord: 1..322
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 278..287
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 184..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G004950.1	ClCG08G004950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034247	snoRNA splicing
cellular_component	GO:0000932	P-body
cellular_component	GO:0005684	U2-type spliceosomal complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding