ClCG07G017220 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCTATCGCTATGCTACCTTCCACTAAACTGCACCAAAATCAACTTCCCCGTTCTAGCTTCCGCGGAACCCCACTCCCACCATCCGCCATTTCTTCTACCTCAAACAAACAGGTTCAATTGCTGTTGCTGTTTTTTGCTTAATCTCCTTCCGTACAACTGGGTGCTTCGTTTGATCCCCATTTCTATCAAAATTGTTCCCCCTCGTTGATGGCTTGAGAACTCTAAATGTTTGTTTGTCTATATGTATCTATATATGTGTATGTATGTACGTATATATTAAAAGTGCTACAACACGTTGCAAGAGCTCGAACACTAATCTCTCACTTGTTTTTAAATGATCATGACCCAATAATTGACCTTCAAAGTTGAATAGGGAGGAGATGAAGTTGCAAAAATTTGAACACAGGACTCCTCCTTATTTAATACCATATTAAAACGTTATTAAATTGGATCTTAATAATCTAGTGCACAAACATGAGAAAGACACACACACACATATATATCAATTTTGTACTAGAAGGATATTCAATTTCAACGAATCGTTGCTATTTTTTGTGTTGAAAATTTTGAGTGCTTCTGCTTAACAATGTTGGACCCATTGTGTACAATTGTTGTCTAACATATGTCTACAGTTCTAATAACAAGTGTTCGATACATGTATAATAAAGGCCAGAGTGCCCAAGTATTCGACATATATGTCGGGTGACTCGGACACGTTACTCAAACTAAAGTGTTTGCATTTTTTATTAGACATGTCTAATCCTTTATACATGTTTTAACAGGCATATTAAATTTAGATCAATAATAATGAACATAGTATACAGAGAGTCAAAACTTCACAATTAGTTTACTCCTTATTTGATTCAGTAGTTTACATGTGACTTCTTGTGCTATTGACAGTGTTATGAATGTATTGTAGAGGTTAAATTTAGCATCTTATATAGCGTTGTGGTTTAAGATTTTGGATCTAGACTCGAGAAGTTCTGAAACTACCTGTAATTTAAGTTCACCGGCAAACTTTTTGACGGTATAAATGTAATGCAAGCGTGGCTGAATTAAGCTTAAAATTTGTTTTATGTGTGGAACAGAAACAACATGTTTCAAAGACTTGTCTCACCAAAATCACTGCGAAGTTTGACCTGAAGCCTCCTCCATATCCTCTGGTATGTTTGGCTTGTAATATCACTTAGTTCAACTCTTAATGCTCTCTAATTTTTAGAACGTTTAGTAGCTGTAAATGTTTCATGGCTTTTAGCCTTATACCAGGAATTGCTTCACTAATTATGTTCTTGGAATTCAGTTGGACTTTACTTGATTTAACTATATAATGTCCCTAGGATGTTCTTTTCGAGTCTCGAGTTTTGGGGAAAACTGGATATTGTTATTAATCATTTCAGGATACCAAACAGATCTTGGACTTTATATCATTGCTGGATGAGCTGGTGAATGGATTAGCCCATCTTGTCGTAAAGTTTGGCAAAGTGAATGAAATGAAGGACTTCTCTCTTGTTAAATATTCTTTTTTCCTATAACCGGTGTGACTACGCAATCTAATCCTGAGGGTAACTCGTCCATCCTAAGGCCAACTTCGAGAGATTTCAAAGAGCAGAAGAGTTCATTTTCCTAAGCTTGAACTCAAGATTTAGGTGTTCCTAGATTCTATGTATTCTCAGTCCTTACCTACGGGATCACTCCTCAGGGACTCTGTAGTTCAATATGAAAAATGATGCATATGATCATGAACTTGTTATTAGTACCAATGAACACTACAAGATTTACATCCCAACGTAACTCATCATTTATTTGAGAATAACCACCATGAATAAAAGCATCTGCCATTGGTCAAATGAATTAGCTCTCTAGTCTGCTATCTTCTCTTGATGTATCACTTGTTAGTTATTTCGTTTGCTTCTGTTCCTAATAAATATACGATCGAAAATTCACCATTATGCTTTTAGGAGCACAAATTAACATATAATAACAAACCTTATGCTACAAACTCGTAGTCAAAATTTCTAATACAGTGTCTTTTTTTAATAGAAATGTGACAAAAATAGTCGCTTTGAAGATCCATGGCTTTACATTTGCATTATATGTACTTGTAAATAGGACTATCTCTTACTTTTACAAAGTATACTTCATAGGATGCCTTGGAACCACATATGAGCCGTTCAACCCTCGAGTATCATTGGGGAAAACACCACAGAGCTTATGTGGACAACCTAAATAGACAGATAGAAGGAACTGAGCTGGAGGAATTGTCACTAGAAGATATCATAACTAAAACATACAACAAAGGTGATATCCTTCCACAGTTCAACAATGCAGCACAGGTACACACCCTTCACATAATTACCGACATCTGACTCATCGGTTTTTCACAAGATAGTAATCTTATGAGTAAAGAGCGAATTGTGGTTTGGTGATCATTGTTCTTTTATGGTTAAAATCATATTTTAGTTCATGAAAGTTACTTTCTTTTGGTCCTTGAACTATCGAACATTATGTTTTGATTCCTGAACATTGCATAGACTATTTTGATTTTGACTCCTTGCCATAGACATGTGTTCTGTTTATTTAGTTAACGAGTAGATATCTGCATAAACAAGTGTTTGAAGATATTTGAAGTAGGTTTGACGTTGAGTTTTCAAATGTATTTATATGTTCTTGTTAAATGATTATTGAAAAATTACCGTTAAAGGACAGATAGTTTTTCTCACCAAAATAGGATTTGAGCCTTTCATAAAACGGGAAAAAAAAATCTTCAATCCAAGAAATATCAACAACGAAGTCCTATAACCCACCATCATAACTGCAAATTTGTAGATCTGGAATCACGATTTTCTCTGGGAGTCCATCAAACCTGGGGGAGGAGGGAAGCCATCAGGGGAACTCCTAGAACTGATTGAGAGAGACTTTGGTTCTTTTGAAAAGTTTTTGGAAGAATTCAAGTCTGCTGCTACAACACAGTTTGGTTCTGGTTGGGCTTGGCTTGCATGTGAGTTATATACTCATATTACTTTGAATTGATTTTTTAAGTGTTTAAAAAGAAATTTCTAAGTGAAAAAAAAAAAAGTATTTTTTAGCACTTAGAAAGTCAATTCAAATAGGTCCTCGGTCTCATTTCTCTCCTACTATCAATCACTTTTGCTTTGAATTATGCTAAGTTGGGTCTCGTTTTCTCTTTTTTAGATAAGGATAACACGGTTGACCATCCACGTCCATCAGAGAAGGACAAAAAGCTTGTTATTCTAAAGAGTCCTAATGCCGTTAACCCACTTGTTTGGGACTATGCTGTGAGTACTGCATCATCTTTTGTCGCATTAACATAGAGAAAAAAGGGAATAAGATAATAATTAGCACAGTAAAGTAGAAACAGAGGAAGCAAAATTTCAGTGTGGTTTTAATTTGCCGTCTATAATTCAAAAGTTTCATCATAATCCCTATGGTTTTATTAAATTTACCAAAAAAGCCCTGTTATTACTACATGCTAGCAGCGTTCTTACATCTCAAAGAGAAAATGAGTTGACCTCTAATGTTATTTGAAAGTTAAATTGGCTGATCCTGTATAGACGCACACAAAATATCAGCTGACTATTCCATTTTGTGCACATAAGAAACTTTTTAACAGCTAGTAGGGCGAGTGGAGACATTTTAGACCGTTAATGTCCCATTTGATAACTATTTAACGTTTTTTATTATTATTTTTAAAAAATAAGCTTATGTTACTACTCTCATCTATGACCTTACTTGAGGAGGATCTGTTTTATAGGTTTCACAACTATGTCCTTGAGTTCTAAAGCCACTACTCCCATCTATAAGTTTCTTTGTTTTGGTATTCAAAAAACCAAGCCACGTTTTGGGGGAAAAAGGAATAATAAAGATTTGTCTTTGGTTTTGGAATTTGACTAAAATTCAAATGTTATTTAAGAAATGTGAAAACCATGGTAAGAAAATGTATTGACAACAAACATAAAAAGGGAAAACTAAAACAAAATTGAGGAATGATAATTTAACCTTATTTTTACTTTCCCAATTTTTTTTTGCAGCCACTTCTTACTATCGACGTTTGGGAGGTAATTGATTATATTTATCATCTTATGTCCTTTATTTTTTTGCTGTCGGGTTTTCGGGGTGGGATGTAGAGTTATGTTTGCTTTTGAGAAAAGAGAAATGACCTCCTTTCTTCATTACTAATGTTGTGGTTTCTTATTTTTTTGGATTTGATCTCAACAGCATGCTTATTACCTAGACTTCCAGGTTAGACTTGACCTTATATCTTATGAATTAAATTATCTTGTTCTTCGCCTCTCAATTCTTGACTGGTCTGTCCTTGTACCGTCGTGACTCGTTAAAACTGTTTTTCTTGCAGAATCGGCGGCCTGATTATATATCAACCTTTGTTTCAAACCTCATATCATGGGAAGCAGCAGACTCAAGGCTGCAGAAAGCCAAGGTTGAAGCTGCTGAAAGAGCAAAGGAAAAAGAGAAGAAAAAGGAGAAGAAAAAGGCCAAAGGTAGCGATGAAGAGGTCTACGTCGACAGCAGTTCAAGCGAGTCGGATTCGGATTCTGATTAA ATGGCATCTATCGCTATGCTACCTTCCACTAAACTGCACCAAAATCAACTTCCCCGTTCTAGCTTCCGCGGAACCCCACTCCCACCATCCGCCATTTCTTCTACCTCAAACAAACAGAAACAACATGTTTCAAAGACTTGTCTCACCAAAATCACTGCGAAGTTTGACCTGAAGCCTCCTCCATATCCTCTGGATGCCTTGGAACCACATATGAGCCGTTCAACCCTCGAGTATCATTGGGGAAAACACCACAGAGCTTATGTGGACAACCTAAATAGACAGATAGAAGGAACTGAGCTGGAGGAATTGTCACTAGAAGATATCATAACTAAAACATACAACAAAGGTGATATCCTTCCACAGTTCAACAATGCAGCACAGATCTGGAATCACGATTTTCTCTGGGAGTCCATCAAACCTGGGGGAGGAGGGAAGCCATCAGGGGAACTCCTAGAACTGATTGAGAGAGACTTTGGTTCTTTTGAAAAGTTTTTGGAAGAATTCAAGTCTGCTGCTACAACACAGTTTGGTTCTGGTTGGGCTTGGCTTGCATATAAGGATAACACGGTTGACCATCCACGTCCATCAGAGAAGGACAAAAAGCTTGTTATTCTAAAGAGTCCTAATGCCGTTAACCCACTTGTTTGGGACTATGCTCCACTTCTTACTATCGACGTTTGGGAGCATGCTTATTACCTAGACTTCCAGAATCGGCGGCCTGATTATATATCAACCTTTGTTTCAAACCTCATATCATGGGAAGCAGCAGACTCAAGGCTGCAGAAAGCCAAGGTTGAAGCTGCTGAAAGAGCAAAGGAAAAAGAGAAGAAAAAGGAGAAGAAAAAGGCCAAAGGTAGCGATGAAGAGGTCTACGTCGACAGCAGTTCAAGCGAGTCGGATTCGGATTCTGATTAA ATGGCATCTATCGCTATGCTACCTTCCACTAAACTGCACCAAAATCAACTTCCCCGTTCTAGCTTCCGCGGAACCCCACTCCCACCATCCGCCATTTCTTCTACCTCAAACAAACAGAAACAACATGTTTCAAAGACTTGTCTCACCAAAATCACTGCGAAGTTTGACCTGAAGCCTCCTCCATATCCTCTGGATGCCTTGGAACCACATATGAGCCGTTCAACCCTCGAGTATCATTGGGGAAAACACCACAGAGCTTATGTGGACAACCTAAATAGACAGATAGAAGGAACTGAGCTGGAGGAATTGTCACTAGAAGATATCATAACTAAAACATACAACAAAGGTGATATCCTTCCACAGTTCAACAATGCAGCACAGATCTGGAATCACGATTTTCTCTGGGAGTCCATCAAACCTGGGGGAGGAGGGAAGCCATCAGGGGAACTCCTAGAACTGATTGAGAGAGACTTTGGTTCTTTTGAAAAGTTTTTGGAAGAATTCAAGTCTGCTGCTACAACACAGTTTGGTTCTGGTTGGGCTTGGCTTGCATATAAGGATAACACGGTTGACCATCCACGTCCATCAGAGAAGGACAAAAAGCTTGTTATTCTAAAGAGTCCTAATGCCGTTAACCCACTTGTTTGGGACTATGCTCCACTTCTTACTATCGACGTTTGGGAGCATGCTTATTACCTAGACTTCCAGAATCGGCGGCCTGATTATATATCAACCTTTGTTTCAAACCTCATATCATGGGAAGCAGCAGACTCAAGGCTGCAGAAAGCCAAGGTTGAAGCTGCTGAAAGAGCAAAGGAAAAAGAGAAGAAAAAGGAGAAGAAAAAGGCCAAAGGTAGCGATGAAGAGGTCTACGTCGACAGCAGTTCAAGCGAGTCGGATTCGGATTCTGATTAA MASIAMLPSTKLHQNQLPRSSFRGTPLPPSAISSTSNKQKQHVSKTCLTKITAKFDLKPPPYPLDALEPHMSRSTLEYHWGKHHRAYVDNLNRQIEGTELEELSLEDIITKTYNKGDILPQFNNAAQIWNHDFLWESIKPGGGGKPSGELLELIERDFGSFEKFLEEFKSAATTQFGSGWAWLAYKDNTVDHPRPSEKDKKLVILKSPNAVNPLVWDYAPLLTIDVWEHAYYLDFQNRRPDYISTFVSNLISWEAADSRLQKAKVEAAERAKEKEKKKEKKKAKGSDEEVYVDSSSSESDSDSD Homology
BLAST of ClCG07G017220 vs. NCBI nr
Match: XP_038888698.1 (superoxide dismutase [Fe], chloroplastic-like [Benincasa hispida]) HSP 1 Score: 572.8 bits (1475), Expect = 1.8e-159 Identity = 289/304 (95.07%), Postives = 295/304 (97.04%), Query Frame = 0
BLAST of ClCG07G017220 vs. NCBI nr
Match: APO14280.1 (superoxide dismutase [Luffa aegyptiaca]) HSP 1 Score: 558.1 bits (1437), Expect = 4.5e-155 Identity = 278/304 (91.45%), Postives = 290/304 (95.39%), Query Frame = 0
BLAST of ClCG07G017220 vs. NCBI nr
Match: XP_022141312.1 (superoxide dismutase [Fe], chloroplastic-like [Momordica charantia]) HSP 1 Score: 552.4 bits (1422), Expect = 2.5e-153 Identity = 275/304 (90.46%), Postives = 291/304 (95.72%), Query Frame = 0
BLAST of ClCG07G017220 vs. NCBI nr
Match: XP_004146889.2 (superoxide dismutase [Fe], chloroplastic [Cucumis sativus] >KGN53188.1 hypothetical protein Csa_014742 [Cucumis sativus]) HSP 1 Score: 548.9 bits (1413), Expect = 2.8e-152 Identity = 277/303 (91.42%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of ClCG07G017220 vs. NCBI nr
Match: XP_008453838.1 (PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X1 [Cucumis melo]) HSP 1 Score: 547.0 bits (1408), Expect = 1.0e-151 Identity = 275/303 (90.76%), Postives = 285/303 (94.06%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy Swiss-Prot
Match: Q9LU64 (Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD2 PE=1 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 7.2e-95 Identity = 165/257 (64.20%), Postives = 205/257 (79.77%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy Swiss-Prot
Match: P28759 (Superoxide dismutase [Fe], chloroplastic OS=Glycine max OX=3847 GN=SODB PE=2 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.3e-93 Identity = 160/222 (72.07%), Postives = 185/222 (83.33%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy Swiss-Prot
Match: P22302 (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia OX=4092 GN=SODB PE=2 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.2e-86 Identity = 148/210 (70.48%), Postives = 171/210 (81.43%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy Swiss-Prot
Match: P21276 (Superoxide dismutase [Fe] 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD1 PE=1 SV=4) HSP 1 Score: 318.2 bits (814), Expect = 1.0e-85 Identity = 148/218 (67.89%), Postives = 173/218 (79.36%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy Swiss-Prot
Match: Q9FMX0 (Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD3 PE=1 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 5.2e-69 Identity = 119/237 (50.21%), Postives = 171/237 (72.15%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy TrEMBL
Match: A0A1L5JHX0 (Superoxide dismutase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1) HSP 1 Score: 558.1 bits (1437), Expect = 2.2e-155 Identity = 278/304 (91.45%), Postives = 290/304 (95.39%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy TrEMBL
Match: A0A6J1CJI8 (Superoxide dismutase OS=Momordica charantia OX=3673 GN=LOC111011738 PE=3 SV=1) HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153 Identity = 275/304 (90.46%), Postives = 291/304 (95.72%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy TrEMBL
Match: A0A0A0KUG0 (Superoxide dismutase OS=Cucumis sativus OX=3659 GN=Csa_4G025180 PE=3 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 1.3e-152 Identity = 277/303 (91.42%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy TrEMBL
Match: A0A1S3BY07 (Superoxide dismutase OS=Cucumis melo OX=3656 GN=LOC103494442 PE=3 SV=1) HSP 1 Score: 547.0 bits (1408), Expect = 5.1e-152 Identity = 275/303 (90.76%), Postives = 285/303 (94.06%), Query Frame = 0
BLAST of ClCG07G017220 vs. ExPASy TrEMBL
Match: A0A1S4E016 (Superoxide dismutase OS=Cucumis melo OX=3656 GN=LOC103494442 PE=3 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.7e-144 Identity = 267/303 (88.12%), Postives = 277/303 (91.42%), Query Frame = 0
BLAST of ClCG07G017220 vs. TAIR 10
Match: AT5G51100.1 (Fe superoxide dismutase 2 ) HSP 1 Score: 348.6 bits (893), Expect = 5.1e-96 Identity = 165/257 (64.20%), Postives = 205/257 (79.77%), Query Frame = 0
BLAST of ClCG07G017220 vs. TAIR 10
Match: AT4G25100.1 (Fe superoxide dismutase 1 ) HSP 1 Score: 318.2 bits (814), Expect = 7.4e-87 Identity = 148/218 (67.89%), Postives = 173/218 (79.36%), Query Frame = 0
BLAST of ClCG07G017220 vs. TAIR 10
Match: AT4G25100.3 (Fe superoxide dismutase 1 ) HSP 1 Score: 318.2 bits (814), Expect = 7.4e-87 Identity = 148/218 (67.89%), Postives = 173/218 (79.36%), Query Frame = 0
BLAST of ClCG07G017220 vs. TAIR 10
Match: AT4G25100.2 (Fe superoxide dismutase 1 ) HSP 1 Score: 318.2 bits (814), Expect = 7.4e-87 Identity = 148/218 (67.89%), Postives = 173/218 (79.36%), Query Frame = 0
BLAST of ClCG07G017220 vs. TAIR 10
Match: AT4G25100.5 (Fe superoxide dismutase 1 ) HSP 1 Score: 318.2 bits (814), Expect = 7.4e-87 Identity = 148/218 (67.89%), Postives = 173/218 (79.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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