ClCG07G012410 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG07G012410
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	ethylene-responsive transcription factor ERF003-like
Location	CG_Chr07: 28806666 .. 28808019 (-)
RNA-Seq Expression	ClCG07G012410
Synteny	ClCG07G012410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGACCTCAACAACGCTATCGAGGAGTTCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCACCCTTTACTGTAATTCTCTCTCTCTCTCTCTCTCTCCCTCCCATAATCACTTCCTCCAAAATCACTTCTCCATCTTCTTTTCCAACCTTTTCTCTCTAAATTATCCACACCATATTTCAAAGTGTGTTCATAATGATTTATATATATATATATATAAGTGCTTTTCATATAATTTTCTTTTTATTAATGTTTGATTTTTACACTTTTTAAATCTTATTTTCATGCATAAAAATTGAGCTTAATTGCATTTCTTCTCGGAGGTTCCATACTTCATTTTCATAATTGTTGTACTAAAAAAAATGTCACTTTCATACCATCAATAGTGACTTTGAGTTATTCAAAAGTTATTTGAGAATGAATGAACAAAATAAAAAGTAATTTTAATAATTTCAAAACTACTCTCAAACATACTTTCTTTGGTAATATACTTTTTCTTTTAATACAACGATGGTAGAAATGAGAGATGGAACCTTCGACCTCTAGAGAAGGTTATGTCAGGTAATACACTTTTTATGATCAATCCTTGGGTGCAATCTAGAAACAAGAGTTGCAAATATATTGTTTTAGAAGTGTCATTGGACATGAGTAAGTTGAAAAAGATTTCTACACTCAAGTTTATTTTTCTACTTTGAAATAATTATTCATAGTTCATGAAATTTAGTACAGAACACATTGACTATTTATTTTTAAATTTTCATAATTATGTAAACGGTAAAGTTGAAAATTTAAAATGAAAAATGGTTTTAAACTAAAGAAATAAAATCGTTTACTACATGAGATAAAAACCACACAAACAAAAATATTGATTTGTAAACCATTCTAAACGAATCAGGAAGACAAGGATATGGCTGGGCACTTTCGAAACGGCGGAAGACGCCGCCAGAGCATATGACGAAGCAGCTACAATTATGTGTTGCCCTAACAATCTCCCAACCAATCACAGTGCGCCACCTCACCTCTCGTCGGCGCCGCCGTCGTCTAAGCTTCTAACTCCCACTTTGATCGACAAGTTGCAAAGATGTCGAATGGCTTCCCTCCAAATGACCAAAACCCAATTCGCCCTCCGGAAATCCGCCGACCCAACTCACCGTCCGGCCACCAAACTCCACGACGGTCACTGGTCGGAAACAGAGGTCAAGTGGGTCGCCGGTGGGGAGGCTGAGGAGGTCCGCCGGCTTGAAGACGACCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATGATAATCATAATTTTGGTTCTACAAATAATTAG

mRNA sequence

ATGGCAAGACCTCAACAACGCTATCGAGGAGTTCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCACCCTTTACTGAAGACAAGGATATGGCTGGGCACTTTCGAAACGGCGGAAGACGCCGCCAGAGCATATGACGAAGCAGCTACAATTATGTGTTGCCCTAACAATCTCCCAACCAATCACAGTGCGCCACCTCACCTCTCGTCGGCGCCGCCGTCGTCTAAGCTTCTAACTCCCACTTTGATCGACAAGTTGCAAAGATGTCGAATGGCTTCCCTCCAAATGACCAAAACCCAATTCGCCCTCCGGAAATCCGCCGACCCAACTCACCGTCCGGCCACCAAACTCCACGACGGTCACTGGTCGGAAACAGAGGTCAAGTGGGTCGCCGGTGGGGAGGCTGAGGAGGTCCGCCGGCTTGAAGACGACCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATGATAATCATAATTTTGGTTCTACAAATAATTAG

Coding sequence (CDS)

ATGGCAAGACCTCAACAACGCTATCGAGGAGTTCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCACCCTTTACTGAAGACAAGGATATGGCTGGGCACTTTCGAAACGGCGGAAGACGCCGCCAGAGCATATGACGAAGCAGCTACAATTATGTGTTGCCCTAACAATCTCCCAACCAATCACAGTGCGCCACCTCACCTCTCGTCGGCGCCGCCGTCGTCTAAGCTTCTAACTCCCACTTTGATCGACAAGTTGCAAAGATGTCGAATGGCTTCCCTCCAAATGACCAAAACCCAATTCGCCCTCCGGAAATCCGCCGACCCAACTCACCGTCCGGCCACCAAACTCCACGACGGTCACTGGTCGGAAACAGAGGTCAAGTGGGTCGCCGGTGGGGAGGCTGAGGAGGTCCGCCGGCTTGAAGACGACCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATGATAATCATAATTTTGGTTCTACAAATAATTAG

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMTKTQFALRKSADPTHRPATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNHNFGSTNN

Homology

[Close]

BLAST of ClCG07G012410 vs. NCBI nr
Match: XP_008454208.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76
Identity = 145/170 (85.29%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAATIMCC PNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMTKTQFALRKSADPTHRPATKL 120
           L TNHSAP H S A PSSKLLTPTLI+KLQRCRMASLQMTK QFA+RKSADPT  PATKL
Sbjct: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 HDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNH 170
             GHW E E +WV+  E EEVRRLEDDHVEQMIQELLDLGSFEFCPN+N+
Sbjct: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 170

[Close]

BLAST of ClCG07G012410 vs. NCBI nr
Match: XP_031740459.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN52914.1 hypothetical protein Csa_015366 [Cucumis sativus])

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76
Identity = 149/180 (82.78%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAATIMCC PNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMTKTQFALRKSADPTHRPATKL 120
           L TNHSA  H SSAP SSKLLTPT I+KLQRCRMASLQMTK QFA+RKSADPT  PATKL
Sbjct: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 HDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN 177
             GHW E   +WV   E EEVRRLED+HVEQMIQELLDLGSFEFCPN+N   H+FGSTNN
Sbjct: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNNNHHHFGSTNN 180

[Close]

BLAST of ClCG07G012410 vs. NCBI nr
Match: XP_022949239.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 273.5 bits (698), Expect = 1.3e-69
Identity = 142/192 (73.96%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM------TKTQFALRKSADPTH 120
           PTNH+AP H LS+ PPSS LLTPTLI+KLQ+CR AS QM       KT F+ RKSA P+ 
Sbjct: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 RPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPND 177
           R  T   DG      H+ ET+ KWVAGGEA+E+ RLEDDHVEQMIQELLDLGSFEFCPN+
Sbjct: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

[Close]

BLAST of ClCG07G012410 vs. NCBI nr
Match: KAG7036532.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.3 bits (695), Expect = 2.9e-69
Identity = 141/192 (73.44%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNL
Sbjct: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 81

Query: 61  PTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM------TKTQFALRKSADPTH 120
           PTNH+AP H LS+ PPSS LLTPTLI+KLQ+CR AS QM       KT F+ RKSA P+ 
Sbjct: 82  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 141

Query: 121 RPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPND 177
           R  T   DG      H+ ET+ KWVAGG+A+E+ RLEDDHVEQMIQELLDLGSFEFCPN+
Sbjct: 142 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 201

[Close]

BLAST of ClCG07G012410 vs. NCBI nr
Match: XP_023525763.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.2 bits (692), Expect = 6.4e-69
Identity = 141/192 (73.44%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM------TKTQFALRKSADPTH 120
           PTNH++P H LS+ PPSS LLTPTLI+KLQ+CR AS QM       KT F+ RKSA P+ 
Sbjct: 61  PTNHNSPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 RPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPND 177
              T L+DG      H  ET+ KWVAGGEA+E+ RLEDDHVEQMIQELLDLGSFEFCPN+
Sbjct: 121 PHPTNLNDGYGASGVHLPETDAKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

[Close]

BLAST of ClCG07G012410 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.4e-44
Identity = 106/178 (59.55%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCP--- 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA +MC P   
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  NNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMTK-------TQFALRKSAD 120
            N P N +A P       SSKLL+ TL  KL +C MASLQMTK       TQ A  +SAD
Sbjct: 61  TNFPYNPNAIP-----TSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSAD 120

Query: 121 PTHRPATKLH--DGHWSETEVKWVAGGE--AEEVRRLEDDHVEQMIQELLDLGSFEFC 165
                A + H   G    TE+KW  G     +  R LE+DH+EQMI+ELL  GS E C
Sbjct: 121 SDGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of ClCG07G012410 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-30
Identity = 72/103 (69.90%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMC---CP 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAA +MC     
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  NNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMTK 101
            N P N +A     S   SSKLL+ TLI KL RC MASLQMT+
Sbjct: 61  TNFPYNPNA-----SQSSSSKLLSATLIAKLHRCYMASLQMTR 98

[Close]

BLAST of ClCG07G012410 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-19
Identity = 77/199 (38.69%), Postives = 97/199 (48.74%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPT 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA +M   N   N P 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NHSAPPHLS------------SAPPSSKLLTPTLIDKLQR-CRMASLQMTKTQFALRKSA 125
           N++     S            S+  SS  L+  L  KL++ C+  S  +T     LR   
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLT----CLRLDT 124

Query: 126 DPTH-----RPATKLHDGHW--------------------------SETEVKWVAGGEAE 158
             +H     + A    D  W                            TEV+   GG  E
Sbjct: 125 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVE--IGGSRE 184

[Close]

BLAST of ClCG07G012410 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.3e-19
Identity = 75/179 (41.90%), Postives = 99/179 (55.31%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIM---CCPNNLP- 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA +M       N P 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  --TNHSAPPHLSSAPPSSKLLTPTLIDKLQR-CRMASLQMTKTQFALRKSADPTHRPATK 125
             +N S    ++SA  S K L+  L  KL++ C+  +  +T     LR   D +H    +
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLT----CLRLDNDSSHIGVWQ 124

Query: 126 LHDGHWSETEVKWV------------AGGEAE----EVRR---LEDDHVE-QMIQELLD 158
              G  S+T   WV             GG+ E    +VR     EDD +  QMI+ELL+
Sbjct: 125 KRAG--SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQEDDQMAMQMIEELLN 177

[Close]

BLAST of ClCG07G012410 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-18
Identity = 58/132 (43.94%), Postives = 76/132 (57.58%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPT 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA +M   N   N P 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  NHSAPPHLSSAPPSSKLLTPTLIDKL--QRCRMASLQMTKTQFALRKSADPTHRPATKLH 125
             S          +S L++P  + +L   + R +   +T +   LR   D +H    +  
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 DGHWSETEVKWV 133
            G  S+T   WV
Sbjct: 125 AG--SKTSPTWV 134

[Close]

BLAST of ClCG07G012410 vs. ExPASy TrEMBL
Match: A0A0A0KVJ4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.3e-77
Identity = 149/180 (82.78%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAATIMCC PNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMTKTQFALRKSADPTHRPATKL 120
           L TNHSA  H SSAP SSKLLTPT I+KLQRCRMASLQMTK QFA+RKSADPT  PATKL
Sbjct: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 HDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN---HNFGSTNN 177
             GHW E   +WV   E EEVRRLED+HVEQMIQELLDLGSFEFCPN+N   H+FGSTNN
Sbjct: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNNNHHHFGSTNN 180

[Close]

BLAST of ClCG07G012410 vs. ExPASy TrEMBL
Match: A0A1S3BY29 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103494684 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.3e-77
Identity = 145/170 (85.29%), Postives = 152/170 (89.41%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCC-PNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAATIMCC PNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMTKTQFALRKSADPTHRPATKL 120
           L TNHSAP H S A PSSKLLTPTLI+KLQRCRMASLQMTK QFA+RKSADPT  PATKL
Sbjct: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 HDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDNH 170
             GHW E E +WV+  E EEVRRLEDDHVEQMIQELLDLGSFEFCPN+N+
Sbjct: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 170

[Close]

BLAST of ClCG07G012410 vs. ExPASy TrEMBL
Match: A0A6J1GC95 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111452652 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.3e-70
Identity = 142/192 (73.96%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHSAPPH-LSSAPPSSKLLTPTLIDKLQRCRMASLQM------TKTQFALRKSADPTH 120
           PTNH+AP H LS+ PPSS LLTPTLI+KLQ+CR AS QM       KT F+ RKSA P+ 
Sbjct: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 RPATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPND 177
           R  T   DG      H+ ET+ KWVAGGEA+E+ RLEDDHVEQMIQELLDLGSFEFCPN+
Sbjct: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

[Close]

BLAST of ClCG07G012410 vs. ExPASy TrEMBL
Match: A0A6J1KDM8 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111492899 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.0e-67
Identity = 138/191 (72.25%), Postives = 150/191 (78.53%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQM------TKTQFALRKSADPTHR 120
           PTN +AP H  SAPP S LLTPTLI+KLQ+CR AS QM       KT F+ RKSA P+  
Sbjct: 61  PTNRNAPLHSLSAPPPSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSRP 120

Query: 121 PATKLHDG------HWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN 177
             T L D       H+ ET+ KWVAG EA+E+ RLEDDHVEQMIQELLDLGSFEFCPN+N
Sbjct: 121 QPTNLDDAYGSSGVHFPETDAKWVAGEEAQEIARLEDDHVEQMIQELLDLGSFEFCPNNN 180

[Close]

BLAST of ClCG07G012410 vs. ExPASy TrEMBL
Match: A0A6J1DIX5 (ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3673 GN=LOC111020953 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.6e-57
Identity = 120/173 (69.36%), Postives = 132/173 (76.30%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPNNL 60
           MARPQ +YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA IMCCPNNL
Sbjct: 1   MARPQHKYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHSAPPHLSSAP----PSSKLLTPTLIDKLQRCRMASLQMTKTQFALRKS-ADPTHRP 120
            +NH+APP  SS+     P SKLLTPTLIDKL++CRMAS QM K +   +   +D + RP
Sbjct: 61  SSNHNAPPQYSSSASTLGPVSKLLTPTLIDKLEKCRMASFQMAKKKLPTKTHLSDRSRRP 120

Query: 121 ATKLHDGHWSETEVKWVAGGEAEEVRRLEDDHVEQMIQELLDLGSFEFCPNDN 169
           A KL  G         V   E +E  RLEDDHVEQMIQELLDLGSF FCPN+N
Sbjct: 121 AAKLDGG--------GVQSPETQEFHRLEDDHVEQMIQELLDLGSFHFCPNNN 165

[Close]

BLAST of ClCG07G012410 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-45
Identity = 106/178 (59.55%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCP--- 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAA +MC P   
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  NNLPTNHSAPPHLSSAPPSSKLLTPTLIDKLQRCRMASLQMTK-------TQFALRKSAD 120
            N P N +A P       SSKLL+ TL  KL +C MASLQMTK       TQ A  +SAD
Sbjct: 61  TNFPYNPNAIP-----TSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSAD 120

Query: 121 PTHRPATKLH--DGHWSETEVKWVAGGE--AEEVRRLEDDHVEQMIQELLDLGSFEFC 165
                A + H   G    TE+KW  G     +  R LE+DH+EQMI+ELL  GS E C
Sbjct: 121 SDGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of ClCG07G012410 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-20
Identity = 77/199 (38.69%), Postives = 97/199 (48.74%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPT 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA +M   N   N P 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NHSAPPHLS------------SAPPSSKLLTPTLIDKLQR-CRMASLQMTKTQFALRKSA 125
           N++     S            S+  SS  L+  L  KL++ C+  S  +T     LR   
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLT----CLRLDT 124

Query: 126 DPTH-----RPATKLHDGHW--------------------------SETEVKWVAGGEAE 158
             +H     + A    D  W                            TEV+   GG  E
Sbjct: 125 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVE--IGGSRE 184

[Close]

BLAST of ClCG07G012410 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-20
Identity = 75/179 (41.90%), Postives = 99/179 (55.31%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIM---CCPNNLP- 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA +M       N P 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  --TNHSAPPHLSSAPPSSKLLTPTLIDKLQR-CRMASLQMTKTQFALRKSADPTHRPATK 125
             +N S    ++SA  S K L+  L  KL++ C+  +  +T     LR   D +H    +
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLT----CLRLDNDSSHIGVWQ 124

Query: 126 LHDGHWSETEVKWV------------AGGEAE----EVRR---LEDDHVE-QMIQELLD 158
              G  S+T   WV             GG+ E    +VR     EDD +  QMI+ELL+
Sbjct: 125 KRAG--SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQEDDQMAMQMIEELLN 177

[Close]

BLAST of ClCG07G012410 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19
Identity = 58/132 (43.94%), Postives = 76/132 (57.58%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIMCCPN---NLPT 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA +M   N   N P 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  NHSAPPHLSSAPPSSKLLTPTLIDKL--QRCRMASLQMTKTQFALRKSADPTHRPATKLH 125
             S          +S L++P  + +L   + R +   +T +   LR   D +H    +  
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 DGHWSETEVKWV 133
            G  S+T   WV
Sbjct: 125 AG--SKTSPTWV 134

[Close]

BLAST of ClCG07G012410 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-17
Identity = 73/179 (40.78%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAATIM---CCPNNLP- 65
           +++RGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA +M       N P 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  --TNHSAPPHLSSAPPSSKLLTPTLIDKLQR-CRMASLQMTKTQFALRKSADPTHRPATK 125
             +N S    ++SA  S K L+  L  KL++ C+  +  +T     LR   D +H    +
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLT----CLRLDNDSSHIGVWQ 124

Query: 126 LHDGHWSETEVKWV------------AGGEAE----EVRR---LEDDHVE-QMIQELLD 158
              G  S+T   WV             GG+ E    +VR     EDD +  QMI+ELL+
Sbjct: 125 KRAG--SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQEDDQMAMQMIEELLN 174

The following BLAST results are available for this feature:

BLAST of ClCG07G012410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454208.1	1.1e-76	85.29	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
XP_031740459.1	1.1e-76	82.78	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN52914.1 hy...	[more]
XP_022949239.1	1.3e-69	73.96	ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]	[more]
KAG7036532.1	2.9e-69	73.44	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023525763.1	6.4e-69	73.44	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of ClCG07G012410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	4.4e-44	59.55	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	2.1e-30	69.90	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	2.8e-19	38.69	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	6.3e-19	41.90	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	2.4e-18	43.94	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of ClCG07G012410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVJ4	5.3e-77	82.78	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=...	[more]
A0A1S3BY29	5.3e-77	85.29	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1GC95	6.3e-70	73.96	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KDM8	1.0e-67	72.25	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1DIX5	3.6e-57	69.36	ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3...	[more]

BLAST of ClCG07G012410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	3.1e-45	59.55	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	2.0e-20	38.69	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	4.5e-20	41.90	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	1.7e-19	43.94	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	2.1e-17	40.78	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 8..19 score: 66.97 coord: 30..46 score: 70.91
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..67 e-value: 9.0E-29 score: 111.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..51 e-value: 3.9E-11 score: 43.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..65 score: 19.018858
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..55 e-value: 6.09559E-28 score: 97.3422
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..65 e-value: 5.8E-21 score: 76.4
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..165
None	No IPR available	PANTHER	PTHR31194:SF48	ETHYLENE RESPONSE FACTOR	coord: 1..165
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G012410.1	ClCG07G012410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0005515	protein binding