ClCG07G003760 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG07G003760
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPentatricopeptide repeat-containing protein
LocationCG_Chr07: 4156101 .. 4158588 (+)
RNA-Seq ExpressionClCG07G003760
SyntenyClCG07G003760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTAAGGTGTGAGCTTTCATGGGTGGCTTTGATTCATATCTGTAATTTGTGTTGCGCCCTTCTTTATCCTAAATGAATTAACCCCTTTGACCAGAGAGAGCCCAAACTCAAACAGAGCGCTGAAATTTGAAATTTTTGATGTTGGTTTTCCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGGTAAGCAAGAAACTTCAAACTTCCTCAATTTCGTTTTAACAATTTCTAAGTGTTTAATCAGACAATTTTCCCCTTTATGTTATAGATCTATTGCATTTACTATCACAACAAATTGACATTTAGAGCTACCATTGTCAATTGTGTCCACAAGCAAGCTGCACAACCGCTTACTAGTTTCATCACAGCTGAGAGGTGTGCTTCTTTTTTTTCCTTTTCTGTTCTTGCCTTCTGAGTTTCCTTTCAACCCCATGATTTTGATTTTGATGTTACTTCGATTAAATATAGACGTATTGTTAAGAAGGTTGGGAAGGAGGAACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTAAGCCCATTTTGTTGAATGCCCCTCCAATATTGAGAGGAAAGAGTGGTAATGTCAATTAGTTTGAAATTCAAATGTTTTTCTAACATACTGTAGGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAATCAATGGAAGCGTGTCATTCAAGTATGAATAAGTTTGGTTTTACTCATTGTCTTTTTTGGCCTTTGGCAAATTGGTACCTTGCTCATGATGTTGATTCTAAAGTATGCAGTTGTGTCTGTTAAGAAATCATCTTTGTCCAGCTCTTACTACTATTTCTTTGCTCATCCTTTGGTCAGCTAATCTACTCGTGTGTTAGATTTTTATTGTAACTTTGCGTTTATTTGATAAGTTGTGGTTTGTTCAGTTTTTATATTGAAGTTTGATCTTGAACCTTGGTCATTTGAACTTTCTTATTGTTAAAAATATGATTGAAGAAACAAGAGATAACACTTTGGATTGGTTGATAAATCAAGTTTCATAATTCCTGTTTAAGATTTAGCTTTATGAGCAGAGAGCTGATGGCTGTTGGTTCCAGAGTTGTGAATGATGAAACAACAGCGAGTCCGTGTCTTTGAGATAAATGCTTCTCCAACTAGAACACCATATTGCTTAAAGCAATGGAAGCCTCGGTGTTGGACTTGCAAGTTACTTAGGTTTTGACATATGAAAAGATTCTCTGATTAACAAGGAAAGTTAGAAGAAGAAAAGTTGTTGTCTTTACCTTATGTCAATTGCCTAAAGTCCTTTCCTGTAGTAAAGTTTGGGCTTATGAATATTTATGATGGTTTCTGTATGCAATATCCAATATTCAATAGTTGCCATTTTTCCTCCACAAGAAAACTGATAACTTAAGACCTTTTCACCTATTGATATCACTTTCATATGTTGAAGTGCCTTGGCTTGATGAGAGTCGGTTAATCAATGCTTCTTATTACTCAGGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACACATACACGGTCCATCTCTAAGAGATTGTTTTCTAGGATGATCTCTTTGTATGAACACCATGACTTGCAAGATAAGATTATCGAGGTATTGGGCATTGGATTTCCACATATCGGTTGTACACCTACGGTCTTACTTCCTGTTCCCCTCTATTTTGAATCTTTTCTTCATACCTTATCATTGATCTCGTGCTTCAACTTCTTCTCTCTTGGTACAGATATTTGCAGACATGGAAGAGTTGGGTGTAAAACCAGATGAAGATACCGTCAGAAGAGTCGGCCGTGCCTTTCAAAAACTAGGACAAGAAGAAAACCGGAAAATCGTCTATAAAAGATATGGATGCCAATGGAAATACATACACTTCAAGGGTGAGAGAGTTAGAGTGCGAAGAGATGAATGGGATGAAGATGATGTATGATTGAAGAGCAGAGATGTCTGAACATTAGCATGAACAAGTTCATTGGATCATAAGGTATCTATCTACTGATCGCCGCTAATTATATGCACTTAAGCACGCTGAAACCTAGATTTGCAGTCATAACCTAGTTTTTCTCCTCTGCTCTGATTGAATATTTTAGAACTGCTAACATAGATGATGCGAACATTGTAAGATATATGAATAAGATATGAAAAAAAAAATATATGTAGTGTATATGTTAACCGAAGTTGAAACTTGTTTTCTTGAATCTTGATTCTATTTTAGGCTTGAGGTATGAAAAGAATAGCAGTAGGATTGTTTTCATTGGAACAAAC

mRNA sequence

GGTAAGGTGTGAGCTTTCATGGGTGGCTTTGATTCATATCTGTAATTTGTGTTGCGCCCTTCTTTATCCTAAATGAATTAACCCCTTTGACCAGAGAGAGCCCAAACTCAAACAGAGCGCTGAAATTTGAAATTTTTGATGTTGGTTTTCCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGATCTATTGCATTTACTATCACAACAAATTGACATTTAGAGCTACCATTGTCAATTGTGTCCACAAGCAAGCTGCACAACCGCTTACTAGTTTCATCACAGCTGAGAGACGTATTGTTAAGAAGGTTGGGAAGGAGGAACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAATCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACACATACACGGTCCATCTCTAAGAGATTGTTTTCTAGGATGATCTCTTTGTATGAACACCATGACTTGCAAGATAAGATTATCGAGATATTTGCAGACATGGAAGAGTTGGGTGTAAAACCAGATGAAGATACCGTCAGAAGAGTCGGCCGTGCCTTTCAAAAACTAGGACAAGAAGAAAACCGGAAAATCGTCTATAAAAGATATGGATGCCAATGGAAATACATACACTTCAAGGGTGAGAGAGTTAGAGTGCGAAGAGATGAATGGGATGAAGATGATGTATGATTGAAGAGCAGAGATGTCTGAACATTAGCATGAACAAGTTCATTGGATCATAAGGTATCTATCTACTGATCGCCGCTAATTATATGCACTTAAGCACGCTGAAACCTAGATTTGCAGTCATAACCTAGTTTTTCTCCTCTGCTCTGATTGAATATTTTAGAACTGCTAACATAGATGATGCGAACATTGTAAGATATATGAATAAGATATGAAAAAAAAAATATATGTAGTGTATATGTTAACCGAAGTTGAAACTTGTTTTCTTGAATCTTGATTCTATTTTAGGCTTGAGGTATGAAAAGAATAGCAGTAGGATTGTTTTCATTGGAACAAAC

Coding sequence (CDS)

ATGTTGGTTTTCCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGATCTATTGCATTTACTATCACAACAAATTGACATTTAGAGCTACCATTGTCAATTGTGTCCACAAGCAAGCTGCACAACCGCTTACTAGTTTCATCACAGCTGAGAGACGTATTGTTAAGAAGGTTGGGAAGGAGGAACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAATCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACACATACACGGTCCATCTCTAAGAGATTGTTTTCTAGGATGATCTCTTTGTATGAACACCATGACTTGCAAGATAAGATTATCGAGATATTTGCAGACATGGAAGAGTTGGGTGTAAAACCAGATGAAGATACCGTCAGAAGAGTCGGCCGTGCCTTTCAAAAACTAGGACAAGAAGAAAACCGGAAAATCGTCTATAAAAGATATGGATGCCAATGGAAATACATACACTTCAAGGGTGAGAGAGTTAGAGTGCGAAGAGATGAATGGGATGAAGATGATGTATGA

Protein sequence

MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIVYKRYGCQWKYIHFKGERVRVRRDEWDEDDV
Homology
[Close]
BLAST of ClCG07G003760 vs. NCBI nr
Match: XP_008464896.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis melo] >KAA0051555.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 507.3 bits (1305), Expect = 8.2e-140
Identity = 248/269 (92.19%), Postives = 254/269 (94.42%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIVKKVG 60
           MLV HGSSTGFDALVPKI CIYYHNK  FR   V CVH QAAQP TSF T ERR+VKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 YKRYGCQWKYIHFKGERVRVRRDEWDEDD 270
           YKRY CQWKYIHFKGERVRVR+D WDEDD
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDD 269

[Close]
BLAST of ClCG07G003760 vs. NCBI nr
Match: XP_011654973.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis sativus] >KGN50596.1 hypothetical protein Csa_021408 [Cucumis sativus])

HSP 1 Score: 502.3 bits (1292), Expect = 2.6e-138
Identity = 246/268 (91.79%), Postives = 254/268 (94.78%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIVKKVG 60
           MLVFHG+STGFDAL+PKI CIYYHNK TF  + V CVH QAAQPLTSF T ERR+VKKVG
Sbjct: 1   MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV  AFQKLGQE+NRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240

Query: 241 YKRYGCQWKYIHFKGERVRVRRDEWDED 269
           YKRY CQWKYIHFKGERVRVRRD WDED
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 268

[Close]
BLAST of ClCG07G003760 vs. NCBI nr
Match: XP_038892676.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa hispida])

HSP 1 Score: 493.8 bits (1270), Expect = 9.4e-136
Identity = 246/269 (91.45%), Postives = 252/269 (93.68%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIVKKVG 60
           MLV+HGSSTGFDALVPKI CIY++NKLTFRA  V CVHKQ          AERRIVKKVG
Sbjct: 1   MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQ----------AERRIVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAF KLGQEEN+K+V
Sbjct: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMV 240

Query: 241 YKRYGCQWKYIHFKGERVRVRRDEWDEDD 270
           YKRYGCQWKYIHFKGERVRVRRD WDEDD
Sbjct: 241 YKRYGCQWKYIHFKGERVRVRRDGWDEDD 259

[Close]
BLAST of ClCG07G003760 vs. NCBI nr
Match: XP_031740922.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 4.6e-135
Identity = 243/268 (90.67%), Postives = 251/268 (93.66%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIVKKVG 60
           MLVFHG+STGFDAL+PKI CIYYHNK TF  + V CVH QAAQPLTSF T ERR+VKKVG
Sbjct: 1   MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNL   VSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KETHHLWKKRDSAGSGQKALNL---VSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV  AFQKLGQE+NRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240

Query: 241 YKRYGCQWKYIHFKGERVRVRRDEWDED 269
           YKRY CQWKYIHFKGERVRVRRD WDED
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 265

[Close]
BLAST of ClCG07G003760 vs. NCBI nr
Match: XP_023541595.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023541609.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 487.3 bits (1253), Expect = 8.8e-134
Identity = 242/270 (89.63%), Postives = 251/270 (92.96%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIV-KKV 60
           ML + GSSTGFDALVPK  CIY +NKL FRA  V CVHKQAAQ LTS  TAERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60

Query: 61  GKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKAL 120
           GKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKR+QWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKI 240
           SISKRLFSRMISLY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV  AF+KLGQEEN K+
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKL 240

Query: 241 VYKRYGCQWKYIHFKGERVRVRRDEWDEDD 270
           VYKRYGC+WKYIHFKGERVRVRRD WDEDD
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDEDD 270

[Close]
BLAST of ClCG07G003760 vs. ExPASy Swiss-Prot
Match: Q2V3H0 (Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g18975 PE=2 SV=2)

HSP 1 Score: 342.4 bits (877), Expect = 4.6e-93
Identity = 163/213 (76.53%), Postives = 189/213 (88.73%), Query Frame = 0 

Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKIVYKRYGCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]
BLAST of ClCG07G003760 vs. ExPASy Swiss-Prot
Match: Q8LG95 (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.2e-46
Identity = 93/203 (45.81%), Postives = 129/203 (63.55%), Query Frame = 0 

Query: 66  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKR 125
           +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL   
Sbjct: 45  VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104

Query: 126 NQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRL 185
            +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DEAE LWN +   H     ++ 
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164

Query: 186 FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIVYKRY- 245
           F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  VG+ F KL  ++  + + K+Y 
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224

Query: 246 GCQWKYIHFKGERVRVRRDEWDE 268
             QW++ + KG RV+V+  + +E
Sbjct: 225 PPQWEFRYIKGRRVKVKAKQLNE 247

[Close]
BLAST of ClCG07G003760 vs. ExPASy Swiss-Prot
Match: Q9M8W9 (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g04130 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 8.8e-04
Identity = 45/181 (24.86%), Postives = 81/181 (44.75%), Query Frame = 0 

Query: 58  KVGKEEHHLWKKRDSAGSGQKA-----LNLVRIVSQCPNEKEAVYGELNKWIAWETEFPL 117
           K  + E  LW  ++  G G +        ++R   Q   E   VY  L++  A  +    
Sbjct: 236 KANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ-QFEFIKVYEMLSEMEANGSPPNS 295

Query: 118 IAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNM 177
           I     +  L  + +++  ++VA  M   G       Y+ L+       R++EAE ++ +
Sbjct: 296 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 355

Query: 178 ILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGV-KPDEDTVRRVGRAFQKL 233
            +     SI+   ++ MI++Y HHD +DK IE+  +ME   +  PD  T + + R+  K 
Sbjct: 356 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 415

[Close]
BLAST of ClCG07G003760 vs. ExPASy TrEMBL
Match: A0A5A7UD21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00890 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.0e-140
Identity = 248/269 (92.19%), Postives = 254/269 (94.42%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIVKKVG 60
           MLV HGSSTGFDALVPKI CIYYHNK  FR   V CVH QAAQP TSF T ERR+VKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 YKRYGCQWKYIHFKGERVRVRRDEWDEDD 270
           YKRY CQWKYIHFKGERVRVR+D WDEDD
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDD 269

[Close]
BLAST of ClCG07G003760 vs. ExPASy TrEMBL
Match: A0A1S3CP50 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502655 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.0e-140
Identity = 248/269 (92.19%), Postives = 254/269 (94.42%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIVKKVG 60
           MLV HGSSTGFDALVPKI CIYYHNK  FR   V CVH QAAQP TSF T ERR+VKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 YKRYGCQWKYIHFKGERVRVRRDEWDEDD 270
           YKRY CQWKYIHFKGERVRVR+D WDEDD
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDD 269

[Close]
BLAST of ClCG07G003760 vs. ExPASy TrEMBL
Match: A0A0A0KSA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 246/268 (91.79%), Postives = 254/268 (94.78%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIVKKVG 60
           MLVFHG+STGFDAL+PKI CIYYHNK TF  + V CVH QAAQPLTSF T ERR+VKKVG
Sbjct: 1   MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV  AFQKLGQE+NRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240

Query: 241 YKRYGCQWKYIHFKGERVRVRRDEWDED 269
           YKRY CQWKYIHFKGERVRVRRD WDED
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 268

[Close]
BLAST of ClCG07G003760 vs. ExPASy TrEMBL
Match: A0A6J1FWG3 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447531 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 241/270 (89.26%), Postives = 250/270 (92.59%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIV-KKV 60
           ML + GSSTGFDALVPK  CIY +NKL FRA  V CVHKQAAQ LT   TAERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKV 60

Query: 61  GKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKAL 120
           GKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKR+QWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKI 240
           SISKRLFSRMISLY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV  AF+KLGQEEN K+
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKM 240

Query: 241 VYKRYGCQWKYIHFKGERVRVRRDEWDEDD 270
           VYKRYGC+WKYIHFKGERVRVRRD WDEDD
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDEDD 270

[Close]
BLAST of ClCG07G003760 vs. ExPASy TrEMBL
Match: A0A6J1K6G2 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491588 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132
Identity = 240/270 (88.89%), Postives = 249/270 (92.22%), Query Frame = 0 

Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNCVHKQAAQPLTSFITAERRIV-KKV 60
           ML + GSSTGFDALVPK  CIY +NKL FRA  V CVHKQAAQ LTS  TAERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60

Query: 61  GKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKAL 120
           GKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKR+QWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKI 240
           SISKRLFSRMI+LY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV  AF+KLGQEEN K 
Sbjct: 181 SISKRLFSRMIALYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKT 240

Query: 241 VYKRYGCQWKYIHFKGERVRVRRDEWDEDD 270
           VYKRYGC+WKYIHFK ERVRVRRD WDEDD
Sbjct: 241 VYKRYGCKWKYIHFKSERVRVRRDGWDEDD 270

[Close]
BLAST of ClCG07G003760 vs. TAIR 10
Match: AT4G18975.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 3.2e-94
Identity = 163/213 (76.53%), Postives = 189/213 (88.73%), Query Frame = 0 

Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKIVYKRYGCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]
BLAST of ClCG07G003760 vs. TAIR 10
Match: AT4G18975.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 3.2e-94
Identity = 163/213 (76.53%), Postives = 189/213 (88.73%), Query Frame = 0 

Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 42  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 101

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 102 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 161

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 162 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 221

Query: 230 KLGQEENRKIVYKRYGCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 222 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 254

[Close]
BLAST of ClCG07G003760 vs. TAIR 10
Match: AT4G18975.3 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 3.2e-94
Identity = 163/213 (76.53%), Postives = 189/213 (88.73%), Query Frame = 0 

Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKIVYKRYGCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]
BLAST of ClCG07G003760 vs. TAIR 10
Match: AT4G18975.4 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 3.2e-94
Identity = 163/213 (76.53%), Postives = 189/213 (88.73%), Query Frame = 0 

Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKIVYKRYGCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]
BLAST of ClCG07G003760 vs. TAIR 10
Match: AT4G21190.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-47
Identity = 93/203 (45.81%), Postives = 129/203 (63.55%), Query Frame = 0 

Query: 66  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKR 125
           +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL   
Sbjct: 45  VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104

Query: 126 NQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRL 185
            +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DEAE LWN +   H     ++ 
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164

Query: 186 FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIVYKRY- 245
           F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  VG+ F KL  ++  + + K+Y 
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224

Query: 246 GCQWKYIHFKGERVRVRRDEWDE 268
             QW++ + KG RV+V+  + +E
Sbjct: 225 PPQWEFRYIKGRRVKVKAKQLNE 247

The following BLAST results are available for this feature:
BLAST of ClCG07G003760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464896.18.2e-14092.19PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic ... [more]
XP_011654973.12.6e-13891.79pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... [more]
XP_038892676.19.4e-13691.45pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa ... [more]
XP_031740922.14.6e-13590.67pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ... [more]
XP_023541595.18.8e-13489.63pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita ... [more]
BLAST of ClCG07G003760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2V3H04.6e-9376.53Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidop... [more]
Q8LG953.2e-4645.81Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX... [more]
Q9M8W98.8e-0424.86Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidop... [more]
BLAST of ClCG07G003760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UD214.0e-14092.19Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CP504.0e-14092.19pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... [more]
A0A0A0KSA51.3e-13891.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1[more]
A0A6J1FWG31.6e-13389.26pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit... [more]
A0A6J1K6G21.0e-13288.89pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit... [more]
BLAST of ClCG07G003760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G18975.13.2e-9476.53Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18975.23.2e-9476.53Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18975.33.2e-9476.53Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18975.43.2e-9476.53Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G21190.12.3e-4745.81Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 76..244
e-value: 4.5E-14
score: 54.2
IPR044646Pentatricopeptide repeat-containing protein EMB1417-likePANTHERPTHR46782OS01G0757700 PROTEINcoord: 26..266
NoneNo IPR availablePANTHERPTHR46782:SF2OS07G0545900 PROTEINcoord: 26..266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 8.506026

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G003760.1ClCG07G003760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding