ClCG07G003240 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG07G003240
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	serine/arginine-rich SC35-like splicing factor SCL30
Location	CG_Chr07: 3361248 .. 3378380 (-)
RNA-Seq Expression	ClCG07G003240
Synteny	ClCG07G003240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCATCCACCTGGAGGCTGGAAGAACCAATTTTTGTGGGGGCAAAGGCACCTCAAGGAAAGCTTGATAGAGATGGATATGAAGAATGGGGGGGCAGCCAGCACATCCAGGTCTGCTTATTCTATAACTCTAAATTCACAGGTTGTTCTACATTGTTGTGCAGCTAAATTTGAGATACGGTGGAGCATTGAGGGGGGATCGGATCGTTCATTTATCGACGTAGTACAGTAGGGAATACCAATGGTTTCTTGGCTCTTAAATCTAAATCATTAATTTCTGAGGGAGGAGAAATTTAAAAGAGGCTTATATTTAACTACTTATCCACTAGCTGAAATTATGCTTGTTAAGTGATTTCATTGCATATTTCCTTTTTGAACTTCTTATTTGTGTAAGGCTATCTAAACCTGTTTACTGATGAATATATGGTTCAAATTTTCAATTAGATGTCAATTTAGAGTTGTTTTATTTTCTCATGTATATCACTGACTTTAGGATGATTTATTTGTTGCCATTTTTGGTTGCATCAATCTGGCTCCCTTTAATGAACCTTTATGATTATAATGTAAACACACAACTTATATGTATCATGTGGATTTCAAACTCCCCACTTCAGGTCAATTGTTGTACATTTTTATATCCACTTTTTCCCACTAATTTTTGAATTTTCTAATAAATAATATTGATATTCAATATATAGTAACAACTGTTTATGGTTTGTTTGATATTTTCTATTTAAAAAAAAAGTTGATGATACCCATTTTAATTCTTGAAATCCTAGCTTCAATTTAAAAACTAAAACTAGAAAAAGAGTAACTGTCTGAATATAAGAGAATTTTGTTAAATAAGAAGAAAAAAAAAAAAAAAAACTTGTCAAGTTGTATAAATTTAAACTTTAAACTTATAATTTTGTCAAATTTCACCTCAAATTTCGTTGAGTATTGCAATAATAATATCCTTGTAATAAGCTCTTGTTTTCAATATCTAAATTATATAAACATTTGGAGGTAATTTGGCCCAACTTAACTTCACTATCGAACTTGCATACTTATTGAATAACTCCATTTTCTAATTTTTTTTATATATATTTTTCACATTTATCAAGGAATTTTATCTTTTCCTCTATCTCTACTTCACACATTTACTAAATAACTTCATCTTACTTTCTTCATCTAATTTCATAATTATCGAAAAATTCAATCTTACAACTCTATACTTCAAATACAAACTTACTAACTCCATATTTATTAACTCCACTCATTGGGTCAAACGCCCCTTCAGATAAAGGAAAAAAGAAAAGAAAAAAAGGCATCACAAAAAATTTTATTTGGTCAAGTGTCTAGACTATTGTTATTATTTTAATGATCTAGACATATTCAAATTAGGCTAAATTATTTTTTTTAAAAAAATCCCTAAACCTTGTCATTTGTCTAAAAAAAAATATCTTTACTAAAGGTGTAATATTATCAGACTTTGTAAACATTTCAAAACTACTCTTGGAGTATAAATTCTTCTAGACTTCAAACAAAAGCTAGCACTTGAATCAGTTTAGTAATCCAAAATTTTGTTCTAGACCACCTCGGACATACCATTCATGGCCCCTATTTCCATCTAAAGTTCTAAAAGATTTCTAGTCCAAAAGTAGATTTGAAACATTTATGAAAAGTCAAGATAATACTGCAACTTTTGGAAGAATAATGATATTCTTTTTTTAAAAAAAAATAATAAAGTATAGGTGGAAAATATTTTTAAAAATTAATTGATTTGTTCTACCATCTACATTTGGATTTTATGATTATTATAATTTTTTTATGGAATTCTAAGCTTTCTATTGTTTAGTAGATTTGTGTTTAAAAATATTGAATAGACATTGATCTATTGACACAAAATTTTCATAAATTTATTGAACACTTTTTAAAATTGAAGTACCTTGAATATAAAATCGAAACTTCAACATTTATTCAAAGAATAATAACCAATTACTTTATTATCATGGTGTAAATTTTTTATTTAAATCTCAAATTTTCAAGGTTTTGAAGTGCTCTAAACTTCATTAGAAAAATTCTCATTTTAATGGAAACTTTGAGATTTAAAAAATGTAGAACAAAATCTTAGAAAAAATCGAAAAAAGAATATTGATGGATTTGGAGTAATAAGAAAAAAACTTGTAGATTTGTATGATTTGATGGCTTACATTATTTGGAAGACAAATTCTTGAAAATTGATGAATATTTTTCTCTCAATAATGATAAATTTGCAAATAATTCCTTCTTTCTTCATTATTTATATATTTAACTGTTTTTCTACAATATCATTTAGTTTACTTTTTAACTTTCCACATCAACAAACATAAAATCTTCCATCAAAATTTACAATTTTCCAAATATCTAATACAAAAAAATATTTGAATTAAAGTTTCTATTTCATATTTTTATACATTTTTTAAATTTTCTACCACTAATAAATATCCATTATTCCATTTTCAATTTCTTCACACCTCAATTTCAATCCTCTCTTCAAATCTCTCAAATTCTCTCAATCTTATTTCTTAAATTAGATCTTTAGTTTCTATTTTACTGTAAATTTTCATCATTTAAGTTAGAATTGAAGGTTAATGTCTTTTTGTTTTTTATTAGACATATACATATTATAATAAATAATTCATATATTTTGTATCCAAATATTTTATGTCTCCTCTAATTTTATAATCAATTACCAAGATTCAACATTGTTTTGTAATTATTTTTCATTTTATTTTTGAAACTTATGCTCTTGCACCAACATTTTCACATACATTTACAACATATATCTTTTTCTTTGACAATACATTTATAATATACATACAAATATTGTCTTACTTTATAGAAATAATAATTAATAGGCTAAATTATATGTATATAAAAAAAGCCCCTAAACTCTGTACTTAATGTCAAATTTACCCTGAATTTTCAAAAGTTTCAAACATACTTTTGAACTTTCAAAAAAATTTAAAAAAATACCATTGTCATTAGTTTTGAAGGAAACCGTTAAAGTTTTATTTAAAAAAATACCCATGAACTTGCAAAGTTTAAAAAATACCCTCAACTTAAAAAAAGTTTAAAAATACCATCAACTTAAGTATATGAACAAAAACCATTAATACATCATTGCAAAAATAACTTTAAAATTAAAAGAAAAATTCAAAATCGCTCCTAACGTTAATATGGTGACCGATTTTCATATAGATAGTCTCATTTCTCTTGATCTTCCAATCTTAGTTTACACCAATTTTGTGAGCAACTAAAATTTTAAATTAAAACATAAAATCCAAAAAAATATTACAAAATTCCAAAATCAAATTACGATAAATAATCAAATAAAAAATATATTTGACTATTAACACATTCAACTAGTAAGGTACAATTTTGTTAAAACATTTAAGTCTTAAAATATTTTGGTGATTTATTTATTTTCTTTCTTCTTATTATAATTCATATACCAGAAATTGCTATTTTTAACCAAAAAAGTTTTTGATGGGACAAAACCTCTTTTTTTAAAAGTTCTAGCCCATTTTTCAACTACAGAATTTCAGAGATGGGTTCCACATGGTGAAATGACATGAATACTCCAAAGATCTTGTTCCTCAACACTCAAACCATATCTTCCCCGAGACCATCTACTTCATAAGAGTCCTTTTTTTTAGTACTTTCTAATGTCTGTCATTTGTTGTAAAATCCATCCTATGTGACCTGATTTTCTAGAAATAAACCCACAAAAAACTTCTTTGAAACGTTGATTTTTGTAAATTTTGGGTTTTCGAATAGTTTGCGGTAAAAAACAGAAAAGAAAATCCAAAATTTTCATGTAAAGGAGGTCTAATATGTGTAGGAATATCTGAAATCATCAAGAAAAAGAATTCGGCATGCGTTTTTTGCTCGCTGTCATTTTTTCGGTAAGTTCATGTTTCCTGTAAGTTGATGGAATTGACGAGAAAAGTGACAAGATGCCCAAATACACGCCAACTTTCGGGAAATTTGGGCATTCTGTCACTTTTCCTTTAAGGTTTCTAACAGAATGCCCAAATACACGCTAAGAGAAATTCGGGCATTCTGTCACTTTTCCTTTAAGGTTTCTAACAGAATGCCCAAATACACGCTAAGAGAAATTCGGGCATTTTGTCACTTTTTACGTAAGGTTTCTAACAAGATCTTACGGAAAAGGTCACAAAATGCCTAAATACACACCAACTTTCGGAAAATTTGGTCATTCTGTCACTTTTCCCGTTTTCCGTAAGATTTCTAACAAGATCTTACGGGAAAAGTGACAGAATGCCCAAATACACGTCGACTTTTGGAAAATTTGGGCATTCTGTCACTTTTCCCTAAGGTTTCGATCTTACGGGAAAAGTCATAGAATGCCCAAATGTCTTGAAAGTTGGCGTATATTTGGGCATTCTGTCACTTTTTCCGTCAACTCCATCAATTTACGGGAAACATGAACTTATCGAAAAAATGATAGCGAGCAAAAAACACATGCTGAATTCTTTTTCTTGGTGATTTCAGACATTCCTACACATATTAGACCTCCTTTACATGAAAATTTTGGATTTTCTTTCCCATTTTTTACTGCAAACTATTCGAAAACCCAAAATTTCTAGAAATTAGCGTTTCAAAAAAGTTTTTTGTGGGTTTGTTTCCAGAAAATCGGGTCACATAGGATGAGTTTTACAATAAATGACAGACATTAGAGAGTACTGAAAAAAATGGACTCTTGTGAAGAAGATAGTATTAGGTAAGAGGTGGTTTGAGCGTTGAGGAACAAGATCTTTGGGTATTCACGTCATTTCACCACGTGGGACCTATCCCTGAAATTCTGAAAATTTGAAAAATGAGTTAGAAAAAAACTTTTTAAAAAAGAGGTTAGTTTTGTATCACAAAAAATTTTTGGGTTAGAAATAACAATTTCACTCATACCTTAACTAGAGAGAGAGAGAGCACAATAGGGTATTAAATAAGGTAGGAAAGAAAAAAAGATGGAAAATAGAAAAGTAAATGGTATTGATGGTTTCGGTTCATCTAAGGTGTTTTTGAATTTTTTTTCCTTAAAATTGAAAGGGCATTTTTGAAACTTTTTGAAAGTTTAAGNAAAAGAGGTTAGTTTTGTATCACAAAAAATTTTTGGGTTAGAAATAACAATTTCACTCATACCTTAACTAGAGAGAGAGAGAGAGCACAATAGGGTATTAAATAAGGTAGGAAAGAAAAAAAGATGGAAAATAGAAAAGTAAATGGTATTGATGGTTTCGGTTCATCTAAGGTGTTTTTGAATTTTTTTTCCTTAAAATTGAAAGGGCATTTTTGAAACTTTTGAAAGTTTAAATTATTTTTTATTCAAAACATTAATAGTTTCATCCAACTTAAAATTTTTCAAAATTTTTATCGATAGTCATATCTCTATCAAAATTTTCACATAATCTAAATGTGGATATTTTCAGCGAGATCAACATTTAGAGGATGGTATATAAATTGAATAGATAGTTTTCATTTATTTATTTGTTGTGAAAAAAAGGTAAAAGTTATAAGAAACTTAATTTTAAAACACCCATTTGAAGGAAACAGAGTTATAAAAATCTAAACCCTACCATACGCATCGCAGTCTTTTGCTTCGAGAGTTCATAGAAATCAGATCGAGGAAGAATCTCTCTTTCCCCTCTTCCTTCTCTTTCCTTCAGGTAATTTTACACTTCCCATACCTGAATTCACTATTTCTTTTATGGATGCATACATGATTCTTAATCGAACCCAAACCCACAAGAAGCTAGTTGTTCACCGCCGCTTTCTTTGTTTCGATCATTTCGAATTAGCTGTTTAGTAGTTTGAATTATCCTTTTCTTTGGGTGAAGAATTGGGAAAGGCGAAGAGAGGAGCCTTTTCGTCCAACCTTCTCAATTCCCTTTTAATATACTTAGTTCTTTTCTTTCTTCTTCGGTGGGTTTGTGATCTTCAACTTCTTTATATGTATCTTAGCGGGCAATTGAGAGGTTTGACAGTCGAATCGGGAATCCTGAGCCTGTGAAGTGTTGTTTAGGGTTTAACAGTCAGAACCCAGTTTTCAGTTTAGGATGACGAGTGGGTTTCATTGGATTAACGACCATTCTATTTATTACTTTTTTTTTTTCCTATTTAGATAGTAATTAGTTTGAATTGGTTGGAAGTTTTGAGAATATGCATCTTAATTGCAGACCTCACCTGATAATTGTCTTGGACAGGTCGAAACATGAGAAGATACAGCCCACCATATCATAGTCCTCCGAGAAGAGGATACGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGCGGTGGTGGCGGCGGGGGGTATGGAAGACGAAGAGAACAGCCTCATGGTAGCCTTCTGGTTAGAAATATTCCTATGGATTGCAGGTCAGGATTTCACCACTTTTTCAGCTTCCTTATTGCTTTGTCCAATTTAGGTTTCAGTAGTAACTACTATTCTAATTGATGAATTTGTTGTGTTTCTCTCACTGCATTTTAAGAGCTTGTCTTCTGGTTGTCTTGGTACATATAGGCCAGAGGAGCTTAGAGTGCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATTCCAAAGGACTATTACACAGGGTGAGCATCTTGTGTTTATTTTTCTTACTTATATATTCACACCAGTCCATCCATGGTATGTGTTGGATTTATTGAGCTGTTATTCCAGCTGATTCTGAATGTGTACTTCTACAATCCTTGTGAGTTAATTTGATGATGACACATCATTATATGGTTAATATCTGAACTTCTGACCTCCAATTTGCATAAAGATTAATCAAATTAACCTCAGTCAGGGTTGGGAATTTTAGGTTTACTTGTTAAGCAATAAGCAAAGCCTTTTGCGTTAGAAATTGTGCCTGATTACTTTCTCTTGTTTGATGCTCTCAGCCGTGTGCTAAGCTTCTTATTTAGGCCAATCATGATCATAGTCAATATATACAGAGCACATTTAATGCTTTTCTCATTTGCATTTCAAGATTCTTCTTGAGGGTGTACGTTTGTGCACTGAGTTCTAATTTTTTTAGACAAAATTTTTAGATCATATGGAACAACCAGTTGAGTTTGTTATTCATAGTCAGGGAATGAAGAGGATGAACAATGTCAAATGAAAGTTTCACCGGACCTTATTTTTTCTGGATGGATCTTATTCCCATTTCATAGTGTGTTTTGAACTGCTTTGTCAGGGGGCATATTGGTTTGAACTTTGAAGTTAAAACAAGCCCAAGCCCCTGTTAATGAGGGTCTACTACCTTTCACTGCCTAACATATAGCTCATCAAGAATGTAAAGAATAATATCGAAATGAGGGTGTCTCTCTCTGGGGAGATATTAGATAACTACACCCATCAATAGAAGTTGATGAGGAAGAAGGTAGATTCTTGAGCAATTGAAGCCAACAAGTTGAAGGTTTTAAAGTTGTGGAATGTTTGTTCAAGTGCTTCATGTTCCAAGTGTTTGAAGAATTTCAAGTCACGAATTTTTGGTTTCAAGTATTTATATCAAGAAATGTGAAAGGAAGAAGGTATATTCTTGAGCAATTGAAGCCAACAAGGTGAAGGTTGTAAGGTTGTGGAATGTTTGTTCAAGTGCTTCATGTGTTCCAAGTGTGTGAAGAGTTTTCAAGTCATGAATTGTTGGTTACTTATATCAAGAAATGTGAAGGTTTTTCAAGTCAAGTTACGTTGAATTGAAGTGCTTATAGTTACAAGAATATGAAGATTTATCAAGTCACTTGCCTCTTTCATGCTTGATTGTAAAGATAAGGTTAGCTACTGAACTTTGAAATTAGCTGCTTTATGTAACTCCAGCCTCAGCTTTGAAGAAAGCTGTCTGAAGTTAATATTGGATTTGAAAAGAAAGCTATTTAGTTAATGGCATCCCAAATCCTTTTAGCCATGAAAAAGTATATTAATGTAATCATTCAATCTAGTTACCCAAGATTTGTGTCCAGAGTGTTTCTTATTTTCATCACTTATTATTATTATTTTTTTTTAATTCTTTGTAGTGAGCCTCGAGGATTTGCGTTCGTGGAGTTTGTTGATCCTTATGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAAATGCGGCAAAGGAGTAGAAGGTAGTTTGTTTATTCTCTTTTTCCTCTTTATAAATGGTTTCAAGGGACTGCAAATGTACAATCCACACTCCCAGATCTTTTCATTCACTGTGTTCAATGGCTATCAGCCTTTTAAGATGTTTATTTAGTTGCAATCTACATGTGTTTTACTATTCTTTTTTTCCTCTTTGTAGGGGACCATCTAGCTATGGTGGACGCCGTTCTCATTATGGTATGGGTACAAGTAGTCTCCCTTAGAATTTCACCAGTCTCAACTTAAATAACTTTTATAGTTAAGTGAAAACCCCAACAACAATGAAATGTGGGAAGACCTCTTATATTCAAATTCTCAATTTTCTAGTTCATGTTACTTCTGCTTATTGATTGTTCAAGAAGTCTATAGCATTATGTATTGTTCTCCCCTCACAATGTACCTGCAAAGCTTGGTTATGAGCACAACACAACAATTTTAAGGGCAATAGCACTGTTCTATTGATAGGGAAAGGTTGAAGACACTAGATAACTATTCTATTGGTTATGGCAGAACTTAAAAGATGAAGAAAACAGAAAGATAACATCCAGCTATAGCCGAGAGAGCTGTTTCTCTCCTACCCAAGCCTCCAGCCCCAAAATGCCACAATGAGGCTCTCCTTTCCCCCCAAACCCCACATAATTAACCTTGCCCTTCACAAACAAACCAACCACGTCCCATTAGCCCACAAACTAACCGCCAGATTTTGAATTTCTTGACTAGCCCCTTCTATAATATGTCTTCACATTGGGGGGCTCAGACATTACTACTTGTTATGGAACTCATGGACATTACAACTTGAAGAAGTAGTATATGGGAATTATTTCTAAGATGTTAGATTGCACGTGTATTCTTATTTGACTTTTCTCGAGACATAAAGATTGGTATATTTATATACCTATCAATGCAATCTAGTTAAGTGGTCTTATAATATCCTTTAGATGGATTTTTTATTTTAGTTTATTTTATTTTTTATGTAATGAACTGAGAAGCTTCTCACATGTCACATACAGACAGATGAATTTTGGTATTTGATGGATCCTTTTACTTGAATCATTCTTTCCGTAGTATGATGCTTTGGTTAGGAGATATTGCCTCTAGGGTCTAAACCTTTTGTTTCCATGTGTAGCTTCTTTTTGGGTTAGTTGGGTTCCTTTAGTCTGTGTGTGTGTTAAGTTAGCATAATAATGGCACTCTTTTGTTATGAAATTTTGAATGTGTGGTCTTGCAGGTTTTGTTGATTGATTAAATTAAAAACACAAACCTCCTCTGTACATTGTATTTGTTTGTGGTATCATGGGTTTCAATTTGTTACTAACACATACTAAAGCTTGGAATCAAATCAATCATTAATTATTGTACTAGACAATATATGTCCATATTGGATTTTTGCATGCAATGATCAACCTGGTTTCAGGCAGTAGTTGATCACTTGATTTTTTTTTTTTTTGGGTACATTATAGGGCGTTCTAGATCTCGTTCATTATCCAGGTCACGCTCCCCCCGTCATCCATCGGGTTCAAGAAGTAGATACCGATCAAGGTAATCTATTTAAAACACATGGTTCATATTTATTAATGCTTTAGATAGAAGTAAATATGCCTTATGAAATTGTCAGGTCCTACTCTCCTGCTCCAAGATGGCGAGGTGACTATTCTGTTTCCCCTGGTAGAAGGCATGCAGATTACCCTGAATCACCCAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGAAGTCGACAAGTATATTCTCCCGGTTATGATAATGCTAATGACCACGATCACAATGGAAATGGAAATGGAAATGGAAATGGATATCATGAGTAAGTTGAATGATTTACCGATGACTTTTGTCCTTCTTGTTGCAACATGATCTTTTCCCATAATTTAAGCCATTTTGCAATTTTGACTTCATTGCTTTTCGGCAGTATCTTGAATATGAAACTATTCTTGGTGTTTCTGTGTTTTTGCATGTGTTGCTAGTCTCATGGTTGAGATTTGAGAATGTTCTCTTTCATTTTGTTTAATCGTAAACTTATCATCTTTGTTTACTACGCTTGTTTTGAAATGTGTTCTGTTCTGTTCTGTTTTATTTATTTGTCGAACCATTCTCTCTTCTCTAGCAAGTCTGCATTTGAAGGGGAGGATGCACGAGCTAATTGGAGGTCATCTCCTGGTAGAACATCAAGATCTCCTTCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACATGGTAGATGATTTCTCTTTGGGAAAACATGGTAGTAGATGATGTAAACCATCGTTTCTAATATTAAAACATTTGTTACTATCCACTATCCAGAAAAAGTTTTTAGATTGTATTTTGTACGATGTTCTTAGTGTGTTCGGATTTTCTAGATGGGGGATTTCCTTTGCTCTCATTTGAAGTTAAAAATTATTATGTTTGACCCATCCAACGTCTTGGTACTTTTCTGGATTGCCAATGCTCTTCTTCTTCATGCATCTCATTAGCATTATCGACAACACCACGACCCTTCTCAGTCATGACGTGCTACTGATGTGATCTCCATGACGTTCTTCACAAGCAATTCTTCTTCATAATATGTTCTGGTGTTGAGAGAAGGGTTGTAGTTACTTTTGCCAATGCATCTTCTCACACCAGTTAAATTCAAAGTAGAACAACTGTTTTTTTTTAGTTCAAACTTTTATTTTAGAGTGTTTTACCAATCTTGCAATCTCAACTTGCTACTGTCTTGGATTTTCTCTGCAGGATCGAAGAATAGTTCAGACATATACTCTCGACCATCACCACCTTAATGTCAAGGGGTGAATTTATTTGGGAAAAAATGATTTAAGGCTTCTCTCTGTTTCCACATGAACCAGAACTGTTTGCTCCAATCCAATCTCTATCTCTTGCAATGAATGTGTCAAAGCTAGAAATTATGAAGAATTGGGATGGAAATTTGGATGGAGTGGTGGGGCTTGTGTCAAAATTAAATTTTAAAAATGAAACATTTTAGTCCCCTAGGTCAATTTGATTTCTATTGTTTTTTTTTTTTCTTTTTATTTTTAAATTTTTAAATATCATATAATTATTCCTAAAAAATCAAAAGAAAAAAATACTTGAAGGATTTTTTAAATTTATTTTTAGAAACTTAGAGACTGAAAAAGTATATTTTGAAAACTAAGTAACCAAATGAACCAATTTTTATAAACTTGGGACTAAAAGAAGTACATTTTTAAAATTCGGACACTAAATGTCCATATTATTCAAATTTGAGACTAAAAAAGTAATTTTTTTGAAATTTCATTTCAACATTTTAACGAAATTTCATTTCCATGGTTATTTTGAAACATTAATTTATGATTAAAGAATAATATTATAACTTTTGGAAAGAAAAAAAACATGTATGTATATTTTTCCCAAAAAAAAAACATGTATGTATATTTTCAAGTGTTACACTTCTCTATAAGTAATTTTCTTTATGAAATTTTTAAAATTATTCTGATTATAATATGAAACTTATCAAACTTTTAATGAGTTGTTTAGGGTATTAAGCTGAGATGTAGAGATATGATGTTTGTGAGATTCATATGTATAGAGATATCGGCGTAGTTTTTTTTTACATAAATAATCTATTTTTTATGATGATTATTTTTGTTTGGAAACTTTTTTATTCAATAATTTTACATATATATTTTTTTTAATAAATCATACATTGCACTTTATTTTAATGTTTTTAAGCATACATGTATTGTTGAGAGTTTTAGGAAATGGGGTTTTGGGTTTACTATAGGTGATGCATTTCTTTTTATTATTATTAAAATTTTTTTATATAAATTTAAGCAATCAGTGCATGTGACGTTTCCAATTAATTCATTTTTATTTTAATATCTTTGATTAAAAAAAAAACTTTTTAAAATAAATACACAAGGGTGTCTAACAATTTTTTTTTTCTCTCAAAAGTGTTTTTAGATACAAATTGTTTGATTTATTACATGATAAAAACATTTTATTAAACCTAAATTACTATAAAGAATGACTATAAAATACTATAAACTAATACAAAAGTTGGGAATTCACACGGAACTTACGTACTTTTAAACAACAAATATGCTTTTATTGACAATCTTGTGCGTCAACTTAAGAATAATTAATAGATATTTTTAATCTTTAAATTAAGGTTTTATAAAGGGTCACATGTCACAAGCGCCAACAAAACAAAAAACTCATGCATCAACAAAACTCAAATTTGTAATAGTCGTAATTTAAAATAATGGTCGTCAGAGTTGGTGGAGTGGCTGCCATCGGAGGTCGCGGAAATTGGCTGTCGGAAGTGGTTACCGGAGTTAGCCGTTGAAGGTGGTCACTTAAATTGGTCATCGAAAATGGTCACTTGTGAGGAAGGTTGAGTGCACTATTAGTGGATATGGTATAAAATATCGATGACATACAATGTTGGCCTCCCAAACAATAAGTTGAGTTCATATCTCAACTCATCTCCTCATTCCAAATACCTCGTAAGTTATAATATTATTAGATTATAAACGCTATTCAAAAAGTTAAAAGGTTAATTAGAGTTCCTTAATGCTCTCTCCAACATTTTTTTAATCTTCAATTTTCCTTAAGAAGCTTGCGACCTTTTTACAATTCATGTAACGGTTTTATTTTTATGCACTCTATATATTTGTTTTAAATCCACGTTTAATAATTTTGATAATAATTGTGATTTTTTCTTTCTCCATATTTGTGTCATTCAAAAAATGGAAACTGAGCAATACTCTCAATACTCAATGTAATTTGCTTCAAATTAAATTTGTATGTCTAATTAAGTAGCAAAATACACACAAATCTTGATAGATCCTACAATTTTGAAAATGGGTGGGGATTAAAGTTCCTCCCTTTAATTATTATAGTTATGTACTTCGTATGCAATATTTAGCATTTACTAAAATTACCAAAATCATCTATATTTGTCTTGTTAAAAAATAGTTTATATCTTAATTGAGGGTCCATTAGTCCTATTTCCATTTGAAATTAGAAATACCAAAAATATATAAGTATATATATAATGGGGGAAGTTCTTGCCTCATATCCATCTATGTTGTTTTCAAATTTATTTGTTTTGTTTTCTCAAAGATTAAATTAAGTGTAAGATATAAAGTAGAGGATGTGAACCTAGTTGAAGTCAAGTGTGTATATTTTATGTCAGTTCAAATAATAATGACAATAACAATATAATGGTTACAGATCTTTTCTTTTAGATATAATTTTTTTTTGTTAAAGATTAATTCAATTATCTTTTGATCGACTAATAACTAAGCCGTCTTAGCTCAGTGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATCCCCACAGACGGCGCACATTGTTGGTTTTTTATCACTTGTGTTTTATAATTGAATTTTGAAAATTTATTTCATATTTCTACCCTTCATATGGTCGTGGGTTGGATGTTTCTTTGTAATGCTTCTTAAACTTACGATTTTTTTTTTTTTTTCTCTTTTTTCTTTTTTAGAACGCATGTTGATAGAAAAAGAATCCTAAAATTGAACTTTCGTTTCATTGCTTATTTTTTTCTTAATTACTTTTTTTGATTGATTCCAAAAGAGGGAGAGGTAATATGAAAAATGAAAACACATTATTGAATATATAATTTGTTTTCAAGTTAATTAAAATTATATGTGTTGATTGTGATTCAAGTTCATATTTTACATCACACACTTCTTTAGAATTTATTTTTATTGAGTAGTTTGTCATCATAAAAAAATGGGAGATCGTTGGCTTTTTGGTCAAAAAATGGGAGATCGTTGGGAGTAGTTTGTCACTTCCATTTTTTGATTAATCTCAAATTAATTAATTAATTAATCAAAAAATGGGAGTGACATTTGGTAACTTTTTTATTTTTTGATTGGTGTTAAAAATAATATGAATTTAATATTATTTTATGTTTGTGTCTAATAGTTAGTTGACTTAAAAAAATATTACAATACTTTTAATCTAAACCATTCTTTTTTTTTTACAAAGATCTAAAGGCCCAAATTAAATTTGGTTTTCACATACTATTGCCTCTTTTTAAACTCATAATCTTCTCAAAATTATAACTTTTATTATTTTCAATCCTCCATAATTCACCAATCTACCATTGTTGCTCTTTCCAAGCTTCAAGTTTTCTCCTGCTCATCTAATTCTCGAGAGAGATTTATGTATGGTGATGATTGATTTGTTGTAAACTCAAAATTTGTAGATCCACTCTTTTAGATAGTTTCTCAAATGTGTTCTTTAATTTTTCCAAACATTTTGTAAGGGTTGCTCTTGATTTGAAAAAGAGAAGTTGAAACGATTTGATCGTTATCAATATAAATGATTGAGTTTGCTCTTGAACTTACAAAAAAAGCAGTGCAGCAGTTGGACTCTAATTCTTGGAAAGAGTTGGCAAGATTTCTAATGACATACTCAAGAGGAGTTTAGGAAATGGATGTAGGCCGGGTTGTGCCAAACCACTATAAAATTACAGTGTCATTTCTCTATTCGTATCCTATTTAATTTTGCAATTAATTTGTTATTGCATTTTTATGCTTGAAATTAATTGCTATTTTTGTTTTTGGAATTAAGTGCTTGTATTGATTTATTTTGATTGATAGTTCTTAAATTTATATATACTTTACCAATCTTACCATTAGAATTAAATAGGGTGTTATAAAGTATTATCGTTAATTTCTTGATTAATTCATTGTGATTTTATTTGCATAAAATTTTTGTTCAAATTACTTATTTGCAAAGAGTTTGTTAATTTGCTTGATTGGGCCCACATTAGGAAAACGTTTAAATTAGTTTTAATAAACTCTATTCACTCCCCTTTAAGGTTGCCGTACCGATCCTACAAAAATTTTAAGTAATTGTTTAGTATGTTAAATTTTGTTTCTTATAGATTAAATTTTAAATATTAAGGAAAATAGTTTTATTTTAAAAAAACCAATATTATATATCTTTAGAAAAAAAGATGCATTTTACTCACGAAAAATATAAAATAAATTTGATTAGGTGAAAAATAGATAAATATATAAAATGAATCTTCCCTTTAAAGTATAAAATTGAAAACTAAATATTTATTAAAAATTTACCCGATTTCAGGAAAATCTAAAATCTAGTAAAATAATGTTTTCAAAGTAAGCATGAAATTAACGTGTTTTTAGAGGTGATTTAACCGATTTAATTTAAACCTATTTCACCAAATGCAAAAAATGGTTAAGATTTTTTCCAAATAATTTTTTTTTTTGACACAGCTAACCAATGTCAAATGTAGCCTTAATCCCTTTTCATTTCTATACAATTATTCACACATTGTATAAGGAACAGAATTGTCCTAAGTAAAACATCATGAATTTGGTAGGTCAAATTAATTGTTTTCACTTTTTCCTTATTCTTCTATCATTTTATTTTACAAAAATGAAATCATTTTCTTCCATTTTGTTAATATATTTACTTTGGTATCTTTCTTCGTTTTATTTGTGATATTAGCACATTTAAAAATTGATAAATAGGAAATTAAAAAAAGTTAAAAGTAAATATATAATTTTATAATTATGCCTATCAAATGGAGAAATATTGCAAAAAAAAAAAAAATGATTTTAATTTTATACAAAATATAAAACAAAAAAATTCATCAAAACTTATTTTGAATTTTAAAAACAAAAAGCAAAAACACAACTATCAAATATGCTTATAGTTTTTCATTTTTTAGAAAAACATATAACAATTACCACCAACGTTTTTGAATTTTTACTTTTTTTAAAGATAGAAAATAAAAAATAATTATCAAATATTTTTATTTTTTTTTAAATAAAAAATAATTACTAAATAATTTTATTTTTAAAATTTGACTAAGAATTCAAATATTTATTCGAGTAATCTAAAACCCAAAGTATGAACATAACATAAAATTTAAAACCAAAAAATTAAAACAAAATTCATTGATAAGTGGTGCCTAATTTTTTATTCTTGGTTTTTAAAAATTAATCTTCTTAATACTACACCACATAATTTTTTTTAATGGTTTACGAGTTTTAAGAATGTTTTGAATTTGTTTTTTAAAAAGGTTATTTTTAACCAATTATTTTTACTTTTAGAATTTAGCTTATACTTTCAATAAAGATAAAATAAACTTACCAAAACTTTAATTTTATTTATTTATTTTTTAAAAAAGAGCAGAAGGTCAAGAGTTAGATTTGAATTTTCCTTGGGAGGATCCATATATACTTTTAGAACATTCTAAAAAAAGAACGTGTAATATGTCTTACATTATCTAAATTTATTATTTAAATAATTACTCAAGATGAAAATATCTCTCCTGTAAAAAAAAAAAAAAAAAATAGAAATGAAAATATCTCCGGGTCCAAATTTTACATTTAGGCCACCGCTAGAAAATAGGAGGTGGGACCCACTCCCACGCAATATAGAAGGAAGGAAGAACACGAAAATTTTAAAAATGAATAATAATAATAATAATAATAATAATAATAAAAATTCAACGGCACGCCGAAGAAGAAGAAAATTAAAAATGATAGTAATAATAAAAAAAAAGAAAAAAAAAATTAAAATAAAGAAAGGAATAAAAAGCGCAGCTGGGCTGGTTCGGTCTGAGGCCAAGGCAAGGCAGTATCGCTTTTCGGCGATTTGAGGGTTTCGAATTTCTTCGCCATTTCGGTATGTTACAATATTTGTATCATCTTCATTGCTAATCTTACTGTTAGTTTTTGATTGTTTCTGTTGTTTGTTCTTCTTTGTCTCGATCTGAATTGTTACAGAATTGTCTAGTGGAAGCTGCAGATGTATGTGATTGGGTAGAAAGAAAGTCTGAGAAATATTGA

mRNA sequence

ATGTTGCATCCACCTGGAGGCTGGAAGAACCAATTTTTGTGGGGGCAAAGGCACCTCAAGGAAAGCTTGATAGAGATGGATATGAAGAATGGGGGGGCAGCCAGCACATCCAGGTCTGCTTATTCTATAACTCTAAATTCACAGTCTTTTGCTTCGAGAGTTCATAGAAATCAGATCGAGGAAGAATCTCTCTTTCCCCTCTTCCTTCTCTTTCCTTCAGGTCGAAACATGAGAAGATACAGCCCACCATATCATAGTCCTCCGAGAAGAGGATACGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGCGGTGGTGGCGGCGGGGGGTATGGAAGACGAAGAGAACAGCCTCATGGTAGCCTTCTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGTGCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCGTTCGTGGAGTTTGTTGATCCTTATGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAAATGCGGCAAAGGAGTAGAAGGGGACCATCTAGCTATGGTGGACGCCGTTCTCATTATGGGCGTTCTAGATCTCGTTCATTATCCAGGTCACGCTCCCCCCGTCATCCATCGGGTTCAAGAAGTAGATACCGATCAAGGTCCTACTCTCCTGCTCCAAGATGGCGAGGTGACTATTCTGTTTCCCCTGGTAGAAGGCATGCAGATTACCCTGAATCACCCAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGAAGTCGACAAGTATATTCTCCCGGTTATGATAATGCTAATGACCACGATCACAATGGAAATGGAAATGGAAATGGAAATGGATATCATGACAAGTCTGCATTTGAAGGGGAGGATGCACGAGCTAATTGGAGGTCATCTCCTGGTAGAACATCAAGATCTCCTTCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACATGGATCGAAGAATAAGTTGGTGGAGTGGCTGCCATCGGAGGTCGCGGAAATTGGCTGTCGGAAGTGGTTACCGGAGTTAGCCGTTGAAGGCAAGGCAGTATCGCTTTTCGGCGATTTGAGGGTTTCGAATTTCTTCGCCATTTCGAATTGTCTAGTGGAAGCTGCAGATGTATGTGATTGGGTAGAAAGAAAGTCTGAGAAATATTGA

Coding sequence (CDS)

ATGTTGCATCCACCTGGAGGCTGGAAGAACCAATTTTTGTGGGGGCAAAGGCACCTCAAGGAAAGCTTGATAGAGATGGATATGAAGAATGGGGGGGCAGCCAGCACATCCAGGTCTGCTTATTCTATAACTCTAAATTCACAGTCTTTTGCTTCGAGAGTTCATAGAAATCAGATCGAGGAAGAATCTCTCTTTCCCCTCTTCCTTCTCTTTCCTTCAGGTCGAAACATGAGAAGATACAGCCCACCATATCATAGTCCTCCGAGAAGAGGATACGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGCGGTGGTGGCGGCGGGGGGTATGGAAGACGAAGAGAACAGCCTCATGGTAGCCTTCTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGTGCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCGTTCGTGGAGTTTGTTGATCCTTATGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAAATGCGGCAAAGGAGTAGAAGGGGACCATCTAGCTATGGTGGACGCCGTTCTCATTATGGGCGTTCTAGATCTCGTTCATTATCCAGGTCACGCTCCCCCCGTCATCCATCGGGTTCAAGAAGTAGATACCGATCAAGGTCCTACTCTCCTGCTCCAAGATGGCGAGGTGACTATTCTGTTTCCCCTGGTAGAAGGCATGCAGATTACCCTGAATCACCCAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGAAGTCGACAAGTATATTCTCCCGGTTATGATAATGCTAATGACCACGATCACAATGGAAATGGAAATGGAAATGGAAATGGATATCATGACAAGTCTGCATTTGAAGGGGAGGATGCACGAGCTAATTGGAGGTCATCTCCTGGTAGAACATCAAGATCTCCTTCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACATGGATCGAAGAATAAGTTGGTGGAGTGGCTGCCATCGGAGGTCGCGGAAATTGGCTGTCGGAAGTGGTTACCGGAGTTAGCCGTTGAAGGCAAGGCAGTATCGCTTTTCGGCGATTTGAGGGTTTCGAATTTCTTCGCCATTTCGAATTGTCTAGTGGAAGCTGCAGATGTATGTGATTGGGTAGAAAGAAAGTCTGAGAAATATTGA

Protein sequence

MLHPPGGWKNQFLWGQRHLKESLIEMDMKNGGAASTSRSAYSITLNSQSFASRVHRNQIEEESLFPLFLLFPSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHGSKNKLVEWLPSEVAEIGCRKWLPELAVEGKAVSLFGDLRVSNFFAISNCLVEAADVCDWVERKSEKY

Homology

[Close]

BLAST of ClCG07G003240 vs. NCBI nr
Match: KAG6601004.1 (Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 540.8 bits (1392), Expect = 1.1e-149
Identity = 304/412 (73.79%), Postives = 320/412 (77.67%), Query Frame = 0


Query: 1   MLHPPGGWKNQFLWGQRHLKESLIEMDMKNGGAASTSRSAYSITLNSQSFASRVHRNQIE 60
           +L+ P GWKNQF  G +  +  L        G     ++AY +      F  R  RNQIE
Sbjct: 9   VLYTPKGWKNQFFCGAKAPQGKL-----DRDGYEGWRQAAYPVV-----FLLRSIRNQIE 68

Query: 61  EESLFPLFLLFP---SGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGYGR 120
            +    +FL+FP   SGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGYGR
Sbjct: 69  GKFSLRIFLVFPLFSSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGYGR 128

Query: 121 RREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE 180
           RREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYE
Sbjct: 129 RREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE 188

Query: 181 ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLS 240
           ASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+S
Sbjct: 189 ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVS 248

Query: 241 RSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQV 300
           RSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RRHADYP SPRGA RERDGERSRQV
Sbjct: 249 RSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQV 308

Query: 301 YSPGYDNANDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADA 360
           YSPGYDNA+  D   +GNGNGNGYHDK AFEGEDARANWR SP RTSRSPSGSRSRSADA
Sbjct: 309 YSPGYDNADGPD--VDGNGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADA 368

Query: 361 SPRHGSKNKLVEWLPSEVAEIGCRKWLPELAVEGKAVSLFGDLRVSNFFAIS 407
           SPRH                                VSLF D RVSNFFAIS
Sbjct: 369 SPRH--------------------------------VSLFADFRVSNFFAIS 376

[Close]

BLAST of ClCG07G003240 vs. NCBI nr
Match: XP_008461655.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461656.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461657.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo])

HSP 1 Score: 514.2 bits (1323), Expect = 1.1e-141
Identity = 268/285 (94.04%), Postives = 271/285 (95.09%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRP 136
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 137 EELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 196
           EELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 197 VLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSY 256
           VLAAESRKRPEQMRQRSRRGPS YGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 257 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGNGNGN 316
           SPAPRWRGDYSVSPGRRHADYPESPRGAPRERD ERSRQVYSPGYDNA++HD       N
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQ------N 240

Query: 317 GNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG 360
           GNGYHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHG
Sbjct: 241 GNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHG 279

[Close]

BLAST of ClCG07G003240 vs. NCBI nr
Match: XP_038892248.1 (serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispida])

HSP 1 Score: 510.8 bits (1314), Expect = 1.2e-140
Identity = 268/288 (93.06%), Postives = 272/288 (94.44%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMD 136
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGGGYGRRREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 137 CRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 196
           CRPEELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 197 ITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRS 256
           ITVVLAAESRKRPEQMRQRSRRGPS YGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRS
Sbjct: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSISRSRSPRHPSGSRSRYRS 180

Query: 257 RSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGNG 316
           RSYSPAPRWRGDYSVSP RRHADYPESPRG PRERD ER+RQVYSPGYDNA+DH+H    
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPESPRG-PRERDAERNRQVYSPGYDNADDHNH---- 240

Query: 317 NGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG 360
             NGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
Sbjct: 241 --NGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG 281

[Close]

BLAST of ClCG07G003240 vs. NCBI nr
Match: KAG7031619.1 (Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506.9 bits (1304), Expect = 1.7e-139
Identity = 267/295 (90.51%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 65  FPLFLLFPSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLL 124
           F +F LF SGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGYGRRREQPHGSLL
Sbjct: 15  FLVFPLFSSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGYGRRREQPHGSLL 74

Query: 125 VRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNG 184
           VRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNG
Sbjct: 75  VRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNG 134

Query: 185 KKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSG 244
           KKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+SRSRSPRHPSG
Sbjct: 135 KKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSG 194

Query: 245 SRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNAND 304
           SRSR+RSRSYSPAPRWRGDYSVSP RRHADYP SPRGA RERDGERSRQVYSPGYDNA+ 
Sbjct: 195 SRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADG 254

Query: 305 HDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG 360
            D     +GNGNGYHDK AFEGEDARANWR SP RTSRSPSGSRSRSADASPRHG
Sbjct: 255 PD----VDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHG 303

[Close]

BLAST of ClCG07G003240 vs. NCBI nr
Match: XP_038892246.1 (serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida] >XP_038892247.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida])

HSP 1 Score: 505.4 bits (1300), Expect = 4.9e-139
Identity = 268/291 (92.10%), Postives = 272/291 (93.47%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMD 136
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGGGYGRRREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 137 CRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 196
           CRPEELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 197 ITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHY---GRSRSRSLSRSRSPRHPSGSRSR 256
           ITVVLAAESRKRPEQMRQRSRRGPS YGGRRSHY   GRSRSRS+SRSRSPRHPSGSRSR
Sbjct: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGSMGRSRSRSISRSRSPRHPSGSRSR 180

Query: 257 YRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHN 316
           YRSRSYSPAPRWRGDYSVSP RRHADYPESPRG PRERD ER+RQVYSPGYDNA+DH+H 
Sbjct: 181 YRSRSYSPAPRWRGDYSVSPSRRHADYPESPRG-PRERDAERNRQVYSPGYDNADDHNH- 240

Query: 317 GNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG 360
                NGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
Sbjct: 241 -----NGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG 284

[Close]

BLAST of ClCG07G003240 vs. ExPASy Swiss-Prot
Match: Q8L3X8 (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.8e-75
Identity = 182/290 (62.76%), Postives = 203/290 (70.00%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDC 136
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGG  G RR   HGSLLVRNIP+DC
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGG--GGRRGSSHGSLLVRNIPLDC 60

Query: 137 RPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREI 196
           RPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD Y+A EAQ  MN + FAGREI
Sbjct: 61  RPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREI 120

Query: 197 TVVLAAESRKRPEQMRQRSR-RGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRS 256
           TVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRS
Sbjct: 121 TVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRS 180

Query: 257 RSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDN----ANDHDH 316
           RSYSPAPR RG                PRG   E D   SR+ YSPGY+     A D D 
Sbjct: 181 RSYSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDRDR 240

Query: 317 NGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPR 358
           NG+     N   +K  +E ED R   R+     SRSPSGSRSRS + SPR
Sbjct: 241 NGD-----NEIREKPGYEAEDRRRGGRA----VSRSPSGSRSRSVEVSPR 262

[Close]

BLAST of ClCG07G003240 vs. ExPASy Swiss-Prot
Match: Q9SEU4 (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.5e-34
Identity = 108/218 (49.54%), Postives = 134/218 (61.47%), Query Frame = 0


Query: 78  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEEL 137
           R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+L
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG------GRSRDLP-TSLLVRNLRHDCRQEDL 63

Query: 138 RVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLA 197
           R  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV A
Sbjct: 64  RKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFA 123

Query: 198 AESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRS-YSP 257
            E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP
Sbjct: 124 EENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRSGDYYSP 183

Query: 258 APRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQV 295
            PR     S+SP     D   S   +P   DG R R +
Sbjct: 184 PPRRHHPRSISPREERYDGRRSYSRSPAS-DGSRGRSL 203

[Close]

BLAST of ClCG07G003240 vs. ExPASy Swiss-Prot
Match: Q9LHP2 (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.6e-30
Identity = 119/290 (41.03%), Postives = 157/290 (54.14%), Query Frame = 0


Query: 78  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEEL 137
           R Y+P   SPP RGYG RGRSP  RG  GG       R      SLLVRN+  DCR E+L
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGGS------RDSDLPTSLLVRNLRHDCRQEDL 63

Query: 138 RVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLA 197
           R PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV A
Sbjct: 64  RRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFA 123

Query: 198 AESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPA 257
            E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+  
Sbjct: 124 EENRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNS- 183

Query: 258 PRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGNGNGNGN- 317
                     P +RH     SP+    E++   SR   SP         HNG+   +G+ 
Sbjct: 184 ---------PPAKRHQSRSVSPQDRRYEKERSYSR---SP--------PHNGSRVRSGSP 243

Query: 318 ---GYHDKSAFEGEDARANWRSSPGRT-SRSPSGSRSRSADASPRHGSKN 363
                H +S       R N   +P +  S+SP   +SRS    PR G++N
Sbjct: 244 GRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSRSPTPVPR-GAQN 255

[Close]

BLAST of ClCG07G003240 vs. ExPASy Swiss-Prot
Match: Q1PDV2 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.3e-21
Identity = 92/226 (40.71%), Postives = 117/226 (51.77%), Query Frame = 0


Query: 78  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMD 137
           R YS  P   SPP  R+GY        P  R +   G  G           LL+RN+P+D
Sbjct: 9   RSYSPRPRDRSPPRERKGYDDNRLRERPSSRDHESSGPSG-----------LLIRNLPLD 68

Query: 138 CRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 197
            RP +LR  FERFG ++D+Y+P++YYTGEPRGF FV++    +A+EA   MN K   GRE
Sbjct: 69  ARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGRE 128

Query: 198 ITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRS 257
           I +V A E+RK P++M  R+  G S   GR   Y R+  RS  R    R+ S SRSR   
Sbjct: 129 IAIVFAEENRKTPQEM--RTTNGTS---GRHGDYKRTSHRSPRR----RYRSHSRSRSPP 188

Query: 258 RSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSP 298
           R  S   + R D   SP RR      SP   PR     +SR   SP
Sbjct: 189 RRESRHSKVREDDLYSPRRRSRSISRSP--LPRNEREYKSRNCRSP 212

[Close]

BLAST of ClCG07G003240 vs. ExPASy Swiss-Prot
Match: Q9BRL6 (Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.9e-17
Identity = 95/253 (37.55%), Postives = 126/253 (49.80%), Query Frame = 0


Query: 122 SLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 181
           +L V N+     P+ LR  FE++G V DVYIP++ +T  PRGFAFV F D  +A +A+  
Sbjct: 15  TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74

Query: 182 MNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---SYGGRRSHYGR----SRSRSLS 241
           M+G +  GRE+ V +A   R+   + RQ   RG S    YG R   YGR     R R  S
Sbjct: 75  MDGAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYGRRSRSPRRRHRS 134

Query: 242 RSRSPR-HPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQ 301
           RSR P    S SRSRYR   YS +P  R  YS       + Y  SP    R R+      
Sbjct: 135 RSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYS------RSRYSRSPYSRSRYRESRYGGS 194

Query: 302 VY-SPGYDNA--NDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSR 361
            Y S GY N+  + +  + + + +G+    +SA   + + A  RS     SRS S SRS 
Sbjct: 195 HYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSAR-RSKSSSVSRSRSRSRSS 254

Query: 362 SADASPRHGSKNK 364
           S   SP   SK K
Sbjct: 255 SMTRSPPRVSKRK 260

[Close]

BLAST of ClCG07G003240 vs. ExPASy TrEMBL
Match: A0A1S3CFP8 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=LOC103500205 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 5.1e-142
Identity = 268/285 (94.04%), Postives = 271/285 (95.09%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRP 136
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 137 EELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 196
           EELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 197 VLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSY 256
           VLAAESRKRPEQMRQRSRRGPS YGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 257 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGNGNGN 316
           SPAPRWRGDYSVSPGRRHADYPESPRGAPRERD ERSRQVYSPGYDNA++HD       N
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQ------N 240

Query: 317 GNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG 360
           GNGYHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHG
Sbjct: 241 GNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHG 279

[Close]

BLAST of ClCG07G003240 vs. ExPASy TrEMBL
Match: A0A6J1H0N2 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=3662 GN=LOC111458935 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 1.3e-137
Identity = 260/283 (91.87%), Postives = 267/283 (94.35%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEE 136
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEE
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEE 60

Query: 137 LRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVL 196
           LR PFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI VVL
Sbjct: 61  LRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVL 120

Query: 197 AAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSP 256
           AAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+SRSRSPRHPSGSRSR+RSRSYSP
Sbjct: 121 AAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSP 180

Query: 257 APRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGNGNGNGN 316
           APRWRGDYSVSP RRHADYP SPRGA RERDGER+RQVYSPGYDNA+  D     +GNGN
Sbjct: 181 APRWRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPD----VDGNGN 240

Query: 317 GYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG 360
           GYHDK AFEGEDARANWR SP RTSRSPSGSRSRSADASPRHG
Sbjct: 241 GYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHG 279

[Close]

BLAST of ClCG07G003240 vs. ExPASy TrEMBL
Match: A0A6J1JIZ1 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661 GN=LOC111485002 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 4.2e-136
Identity = 261/288 (90.62%), Postives = 267/288 (92.71%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMD 136
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGGGYGRRREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 137 CRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 196
           CRPEELR PFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 197 ITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRS 256
           I VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+SRSRSPRHPSGSRSR+RS
Sbjct: 121 IAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRS 180

Query: 257 RSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGNG 316
           RSYSPAPRWRGDYSVSP RRHADYP SPRGA RERDGERSRQVYSPGYDNA+  D     
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPD----V 240

Query: 317 NGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG 360
           +GNGNGYHDK AFEGEDARANWR SP RTSRSPSGSRSRSADASPRHG
Sbjct: 241 DGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHG 284

[Close]

BLAST of ClCG07G003240 vs. ExPASy TrEMBL
Match: A0A0A0KNV5 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G181460 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 1.3e-134
Identity = 261/291 (89.69%), Postives = 267/291 (91.75%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRSPPGRGY------GGGGGGGYGRRREQPHGSLLVRNIPM 136
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY      GGGGGGGYGRRREQPHGSLLVRNIPM
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPM 60

Query: 137 DCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 196
           DCRPEELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR
Sbjct: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120

Query: 197 EITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYR 256
           EITVVLAAESRKRPEQMRQRSRRGPS YGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYR
Sbjct: 121 EITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYR 180

Query: 257 SRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGN 316
           SRSYSPAPRWRGDYSVSPGRRH DYPESPRGAPRERD ERSRQVYSPGYDNA++H     
Sbjct: 181 SRSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQ--- 240

Query: 317 GNGNGNGYHDKS-AFEGED-ARANWRSSPGRTSRSPSGSRSRSADASPRHG 360
              NGNGYHDKS + E +D  R NWR+SPGRTSRSPSGSRSRSADASPRHG
Sbjct: 241 ---NGNGYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGSRSRSADASPRHG 285

[Close]

BLAST of ClCG07G003240 vs. ExPASy TrEMBL
Match: A0A6J1CBL6 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3673 GN=LOC111010084 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 1.3e-134
Identity = 259/291 (89.00%), Postives = 265/291 (91.07%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRP 136
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQ HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQSHGSLLVRNIPMDCRP 60

Query: 137 EELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 196
           EELR PFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYSGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 197 VLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSY 256
           VLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+SRSRSP HPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180

Query: 257 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGNGNGN 316
           SPAPRWRGDYSVSP RRHADYP SPRGAP ERDGERS+Q YSPGYDNA+ HDH      +
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPHERDGERSQQAYSPGYDNADGHDH------D 240

Query: 317 GNGYHDKSAFEGEDARANW------RSSPGRTSRSPSGSRSRSADASPRHG 360
           GNGYHDKSAFEG D RANW      RSSPGR SRSPSGSRSRSADASPRHG
Sbjct: 241 GNGYHDKSAFEGGDVRANWRSSPGRRSSPGRISRSPSGSRSRSADASPRHG 285

[Close]

BLAST of ClCG07G003240 vs. TAIR 10
Match: AT3G55460.1 (SC35-like splicing factor 30 )

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-76
Identity = 182/290 (62.76%), Postives = 203/290 (70.00%), Query Frame = 0


Query: 77  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDC 136
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGG  G RR   HGSLLVRNIP+DC
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGG--GGRRGSSHGSLLVRNIPLDC 60

Query: 137 RPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREI 196
           RPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD Y+A EAQ  MN + FAGREI
Sbjct: 61  RPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREI 120

Query: 197 TVVLAAESRKRPEQMRQRSR-RGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRS 256
           TVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRS
Sbjct: 121 TVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRS 180

Query: 257 RSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDN----ANDHDH 316
           RSYSPAPR RG                PRG   E D   SR+ YSPGY+     A D D 
Sbjct: 181 RSYSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDRDR 240

Query: 317 NGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPR 358
           NG+     N   +K  +E ED R   R+     SRSPSGSRSRS + SPR
Sbjct: 241 NGD-----NEIREKPGYEAEDRRRGGRA----VSRSPSGSRSRSVEVSPR 262

[Close]

BLAST of ClCG07G003240 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 )

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-35
Identity = 108/218 (49.54%), Postives = 134/218 (61.47%), Query Frame = 0


Query: 78  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEEL 137
           R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+L
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG------GRSRDLP-TSLLVRNLRHDCRQEDL 63

Query: 138 RVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLA 197
           R  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV A
Sbjct: 64  RKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFA 123

Query: 198 AESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRS-YSP 257
            E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP
Sbjct: 124 EENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRSGDYYSP 183

Query: 258 APRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQV 295
            PR     S+SP     D   S   +P   DG R R +
Sbjct: 184 PPRRHHPRSISPREERYDGRRSYSRSPAS-DGSRGRSL 203

[Close]

BLAST of ClCG07G003240 vs. TAIR 10
Match: AT1G55310.2 (SC35-like splicing factor 33 )

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-35
Identity = 108/218 (49.54%), Postives = 134/218 (61.47%), Query Frame = 0


Query: 78  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEEL 137
           R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+L
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG------GRSRDLP-TSLLVRNLRHDCRQEDL 63

Query: 138 RVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLA 197
           R  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV A
Sbjct: 64  RKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFA 123

Query: 198 AESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRS-YSP 257
            E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP
Sbjct: 124 EENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRSGDYYSP 183

Query: 258 APRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQV 295
            PR     S+SP     D   S   +P   DG R R +
Sbjct: 184 PPRRHHPRSISPREERYDGRRSYSRSPAS-DGSRGRSL 203

[Close]

BLAST of ClCG07G003240 vs. TAIR 10
Match: AT1G55310.3 (SC35-like splicing factor 33 )

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-31
Identity = 126/286 (44.06%), Postives = 154/286 (53.85%), Query Frame = 0


Query: 78  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEEL 137
           R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+L
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG------GRSRDLP-TSLLVRNLRHDCRQEDL 63

Query: 138 RVPFERFGLVRDVYIPKDYYTG------------EPRGFAFVEFVDPYEASEAQYHMNGK 197
           R  FE+FG V+D+Y+P+DYYTG            +PRGF FV+F+DP +A++A++HM+G 
Sbjct: 64  RKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGY 123

Query: 198 KFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGS 257
              GRE+TVV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P   
Sbjct: 124 LLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRR----RTPPRYYSRSRSP-PPRRG 183

Query: 258 RSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDH 317
           RSR RS          GDY   P RRH     SPR      DG RS    SP  D     
Sbjct: 184 RSRSRS----------GDYYSPPPRRHHPRSISPR--EERYDGRRSYS-RSPASD----- 243

Query: 318 DHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRS 352
              G+   +      KS       R +   SP R SRSPS  R+RS
Sbjct: 244 ---GSRGRSLTPVRGKSRSLSPSPRRSISRSP-RRSRSPSPKRNRS 251

[Close]

BLAST of ClCG07G003240 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A )

HSP 1 Score: 133.3 bits (334), Expect = 4.7e-31
Identity = 119/290 (41.03%), Postives = 157/290 (54.14%), Query Frame = 0


Query: 78  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEEL 137
           R Y+P   SPP RGYG RGRSP  RG  GG       R      SLLVRN+  DCR E+L
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGGS------RDSDLPTSLLVRNLRHDCRQEDL 63

Query: 138 RVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLA 197
           R PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV A
Sbjct: 64  RRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFA 123

Query: 198 AESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPA 257
            E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+  
Sbjct: 124 EENRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNS- 183

Query: 258 PRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNANDHDHNGNGNGNGN- 317
                     P +RH     SP+    E++   SR   SP         HNG+   +G+ 
Sbjct: 184 ---------PPAKRHQSRSVSPQDRRYEKERSYSR---SP--------PHNGSRVRSGSP 243

Query: 318 ---GYHDKSAFEGEDARANWRSSPGRT-SRSPSGSRSRSADASPRHGSKN 363
                H +S       R N   +P +  S+SP   +SRS    PR G++N
Sbjct: 244 GRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSRSPTPVPR-GAQN 255

The following BLAST results are available for this feature:

BLAST of ClCG07G003240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601004.1	1.1e-149	73.79	Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyros...	[more]
XP_008461655.1	1.1e-141	94.04	PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >...	[more]
XP_038892248.1	1.2e-140	93.06	serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispi...	[more]
KAG7031619.1	1.7e-139	90.51	Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyros...	[more]
XP_038892246.1	4.9e-139	92.10	serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispi...	[more]

BLAST of ClCG07G003240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3X8	1.8e-75	62.76	Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=...	[more]
Q9SEU4	1.5e-34	49.54	Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=...	[more]
Q9LHP2	6.6e-30	41.03	Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX...	[more]
Q1PDV2	4.3e-21	40.71	Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=...	[more]
Q9BRL6	4.9e-17	37.55	Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=...	[more]

BLAST of ClCG07G003240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFP8	5.1e-142	94.04	serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1H0N2	1.3e-137	91.87	serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=36...	[more]
A0A6J1JIZ1	4.2e-136	90.63	serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661...	[more]
A0A0A0KNV5	1.3e-134	89.69	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G181460 PE=4 SV...	[more]
A0A6J1CBL6	1.3e-134	89.00	serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3...	[more]

BLAST of ClCG07G003240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55460.1	1.3e-76	62.76	SC35-like splicing factor 30	[more]
AT1G55310.1	1.1e-35	49.54	SC35-like splicing factor 33	[more]
AT1G55310.2	1.1e-35	49.54	SC35-like splicing factor 33	[more]
AT1G55310.3	1.2e-31	44.06	SC35-like splicing factor 33	[more]
AT3G13570.1	4.7e-31	41.03	SC35-like splicing factor 30A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 122..195 e-value: 6.9E-21 score: 85.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 123..193 e-value: 2.4E-18 score: 65.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 121..199 score: 17.676954
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 113..236 e-value: 1.2E-27 score: 98.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..247
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 90..357
None	No IPR available	PANTHER	PTHR23147:SF96	OS02G0252100 PROTEIN	coord: 90..357
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 117..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G003240.2	ClCG07G003240.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding