ClCG07G001840 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG07G001840
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein FAM98A isoform X1
Location	CG_Chr07: 1979697 .. 1985415 (+)
RNA-Seq Expression	ClCG07G001840
Synteny	ClCG07G001840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGGTACCAGAAGGTCGAGAAACCTAAACCTGAATCTCCGATAAACGAAAATGAAATCCGCATCACCAGTCAAGGCGCTATTCGAAACTACATCACTTATGCTTCCACCCTGCTTCAGGTGTCATTTCACTGCTTCTTTTATTGTTTTCATTTATCATTGTATCTCATTTCACTTTTTCTTGTTGGTGTTCTGTGATATGCTGAATCTGTCTTATGAGGTTAGGTTTATGCTGTTTGGATTGTGGATGCACTAGACGTATTAGAAGATTTTCTTGGTTTTGATTATTTTTCATTTTCTTGGAATGTTAGCCGACATTTATTGGTTTGCTACATTTGCTGGTATATTGATTTCATTTCTTCTACTTGTGACTTTTGAGGAATAGTTGCTCGCTGGCTGATGCTTTGCCGTATATGCATTGTATGTGGAAGTGTCTGTTAGTTTAATGCACGAGCTATGGTACTTCTTAACATACGATAGCTCGTGAAATATCACCTGTTCTGTTGATTGTCTACAGTACATATAGTTTTTTCTTCTAGCTTATCGTGAATTAGTAGCTACTTCATTTTTCTTCACTTTACCTTGTAAAAAGAATAAAGATACGGTTGAATTTATGGTTTATAGTTTATACTGTATTCTCAGATCGAGTAATTACGCTAAGGCAGTGATCATGTGGAGCTTGGTGTTTCTATATTATCTTGACGTGATTTTTGCCTCAGGTTTCTACTATTCGTATACATTTCTTAATATATAAATTTACCATCACGATATAGCTACGAAGTTCTCTTTCTTATTAAAAGAATCATATGCACTAGAGCTTATGTTTCACAATGTATTACGATTACCAAATCTATTAAGTATGGTCATACAGTGATCGCATTTAAATGGTCATTTCTTTATTTTTGGCTCATGGGTTTCTTCAATTTGTTTAGTACTATTTTTTTAGTTTTGAAGAAGTTAATTATCGATGTTATTCATGGGTCAAGTTTAATGTCCTATGTTTATATATTCAATTAGCAGATGCATTGTTCTCAATATTGGCCAACATGAGCTATCGCACCTAATCGAGGCACTCTACCCCCTACCATAAGGCCTGAAATTTGAATCTGCACTCTACACACCATTGAATATTTCAAATCCTGATAGGCTTGGATTGCAAAAGTTAGGAATATTTAATCTTGGCCCAATTGAACGATTGTGGACAATTTTCATTATAACTGGAGCAACAGGAATTTCTTCTTCTTAAGTTAGTGTATAGTTCCTGAGTGTTCAGAATGTGTCAGTTTTGTCATCTGCTTTTATGATTGTTCATTTTGCTCCATTGTTTCACTACTTAAGTTGAAACCCTGGGTCTCCAAGTCTGGTTGTTCTAAAAGCTAGGTACTGAGATGAATTCATGCACAGCAATTAGTTTTTTCTGTTTGAGGGCTCTATATAATATCAAATCCTCTAAAGATATCAGAATAAAATAAATGATTGTGGTTTTGAAATAACATATGATGTTAACTTAATTTTGACTTATGGGAATTAAGTCCTTCAGAGAGTACCTTTCAGCTTTAGAAAATCATATGAAGTTGTTCCTCTCCGTTTCTGAAAACCCAACTATTTCCTCCCTCAAGGCTGAGCAAAGTTTTGTTTGTTTGGTTTTTAGGCTGAACCTAATCCTTACAAACTCAATTGTGTGCACCCAAGGAATCAAAGAATTTTCTTTTTCCACAAACGTCAATCCATGTTCAAAAAATGTCCTGCATTATTCTTCTTTCTCCTGATAAGTTCCATTTCTGGGGCATCTTGATGAAGGCTCTAGGATTAGTGTTTAATAGGTTTTGAGATTGAGGACCTGTCTCTATTTATCATTCCATTTACTTGATCAACTAGTCATTTGTGTGGGGGGAAGGGATTCCATATCTTGGCTTTTGAAGCCCTCTTAGGGCTTTTCCAGCAGTTCTTTCTTTGGGATCCTTTTTACCCCTTCTCCCTCTTGAGGATCCTCTTCGTTTTTCTTTTGAAGGTCAAAACTAAGAGTTTTAAATTTTAGAGTGAATACTCAAGATCAAATCCAGAGGCTGTTGCTGCCTCAATGGTGTCTCATTTATATGAAACATGAAGAAGGATCTTGACCATTTAATTTGGGATTGTGATTTTGCTACCTCTCTTTGGAACAGGTTCGTTTGGACCTTTGGGTTTGTGCTGGCTCGTAATAGAGGTTGTTGTTCGATGTTTGAGGAGGTGTTCTTGAATTCTCCTTTTTGTGTCAAAGGAAAGATTCTTTAGCAGTCTTATTCTTTTTGCTTTGTTGTGTGGCATTTGGCTTGAGAGGAATATTTTTTGTGGGGTTTGTGCTTGCTTGTAATAGAGGTTATTGTTTGATGTTAGAGGAGGTGTTCTTGAATTCTCCTTTTCGGGTCAAGGGAAAGATTCTTTAGCAGTCTTATTCTTTTTGCTTTGTTGCGGAGCATTTGGCTTGAGAGGAATATTTTTTGTGGGGTGGAGTAGTCTGGGGAGGACTTTGCGGTTACACTTAGGTTTAATGATGTTTACGTGTTATGTTTCTATTTGTTTGAAACCGAAAGTTGGAAAACTGGTTTGGATCATTCTCTATATTTGGATTTTGTGATTTCAAAATAAAATTTTATGATCTTTCATTTAACATAGTCAACAATAGAAAAAATATAGAAAGAAAACTAGAGAAAGTGAGTTGCTTAGACATGGCTTTACCAGCAATTGAAAATGTATTGCAGAGAGTATGTAATAAATGCACAGTTATTTGGGAACTCGTATAGTGCAACAGTTACTTGAAGACTGTTTTTCTAAGATATCCTTAGACATCAAAAATATTTTTGAAATCATACTTGAACATGAATTGAATTAAACCAGAATGATTTTGAAAAGGAAAAGAAAAAAGAAAGAAAATGTACCTTGTCAGCTAGTTCAATTTTGATTAGATAAATTTTAGTTGTTAGCTAATTTTTGATCCCCCTTGGTATCTTTGCTGTTTAAAAATGAACCTAGATATATAAGATCAAGGCTTTTTTTCCCTTGTTTATTCATATGTTTCTAAGCATTTGCTTACTGTCGGCTGAGAATGAATCCTTTTGTGTTTTGGTTTCATATTTTGTTTTCACTTTTAATCCAGGACAAACATGTTAAAGAGATAGTGTTGAAAGCCATGGGGCAGGCAATCAGTAAAGCGGTTGCCATTGCAGAAATTTTAAAGGTTTGAGTCCTTTACATTCTGCAACTGTGCATATGTAACCTATTTTATACTTAACAGGCCAGTTTCATTCTGAAACAGAAGAGAACTCCACGACTGCATCAAGAAACTTCCATCAGCTCAGTAAGCATAACTGATGTATGGGAACCTATTGAAGAAGGTCTTGTGCCGTAAGTTTTTAGTCTCTAGAATTATTCTCTGTTAATTGCCTGATGAAGACCTATACACGTACTCACGGTTTTGCCTTATGTGGGTTGGTACTCTTTAGTTTGCAATTGCAAATTTGCTTATTGTTTCTGCTGTGGGTATGTAGCTTTAGCGTTCTCTTTTGCAGATGTATAATAAATAACATCTGACATATGATGCAGTGTGGAGATGACTCGTCATGTCTCAATGATATCAATTACCTTGTCAAATCGAGAACTAAATAAAAACTCTCCTGGGTAAGAAAGTTTGGAAACTGTAGCTGTAGAATATGAAAGTCTACTCTTTGATGTGCTGTTTTCCATTTTTTACATTCAAGTTTCTTATTGCGAATGTTTTAGGATGAAAATTTTTGTTATTTGTAGGTATCAGGCTCCACAATTTGTGGAGCAGCCAAAGCAACAATATAATCAACAGCAACAGCCCAGACAGTCTCGTCCTTATTACAATGCTGTTAATGAAGGTGGTCCTTTTGTCTGGAAAATATAATATACTATTATTGTGAGATGTAGAGAATTTGACATCTTCCACCCTATTTTAGTGCAGCAACAGAAATACGTTAAAAAAACACGGAAACAGAATCATAAAATTAATGGCAACGGGGAGGGGCCGGAGATACACTCCTCATCCCTGTGCCCGCAGGGATTTTCCATCCATCCCCTCCCCATTCCCCGTTGTTCAGGTCTCCACATGAAAAATCTCCAATCTCCAATCTTCATGTTTTTATTTTTCTTTATTGTTTTTTTGATTAAATATTAATAAAAAGTTGATAAATATATTAAAATTGTATATACTTTTATATTTAAGTTAGTATTATCCTATTGCCAATGCCCCTAAACTCTAACTCTTAAGGCGATTTTGAAGGTAGACTGGATGTGGGTTTGAGATACTGGTTGGGAATCTAAAAGAAAGGAATCACTTGATGTTAATGGAGAATAACAGAATTTCATATTATAAGCACAAACCACAAAGATTTTCGCCTTATTGATTAGTAGCTTCCAATTAATTTTAATTCAATGCGGAGGTCACAGTTAATGTGTCTGGAAAATCTGTAAACAAAATTTAATGGAGATCATACTATTAACTGTTGGATTATGGTCCTCTTATGAACTCTGAGACTTTCCTGCATTTGGCAGATCCATATCGCCAAAGCCGAGGTCGAGGTAGAGGGAGAGGGAGAGGTTGGGGCAGAGGTGGATATGGAAACTACCAAGGGGGATATGGCAACTCCCAGGGTGGATATGGCCACTACCAGGGTGGATACGGCCACTACCAGGGCGGATCTGGTTATTACCAAGGCGGATCTGGCCACTATCAAGGTGGATCTGGCCACTATCAAGGTGGATCAAGCGGCTACCAAGGTGGATCCGGCGGCTACCAAGGCAACTATCAAGGTAGATAAGGTTTTGTCCTCTTTCTGTTACGGTCATGCTAATTCTTGAGTTAAGACCTAATTTTTAGTTTCTACTTTGTCGACATAGATAATGGTGGGTACTCAAATTGGAGTAGAGGTGGTGGGCGAGGCAGGGGTTGGACATATCGTGGTAAGTTTCTTTCTCAACTTTCTTCTCTTGTTCAGAATCTAACAAACTGTCATTTTACCGACTTTGTTGATTTTTGGTGCCACCTAACTCTTGATTAATCTCATGGAGGTATGAATTATGATCTGTATTTTTCAGGATTTCTTAAGAAAAAGAGATGGAATGTTTTCAAAGTGACCTCTTTAACTATTTCTTGGTTTAACCAATATTGGGTATTGAATTTTTGTAGGCGTCGTATGGCCCACCAACTTCTTAAGTTGGTGTAAACAACTCAATTTCAATAATAAACACTATTGAACTTGCACATATATTGAGTAACTTCATCTTCCCATTTATTTTTATATTTTTCACATTTACCAAGGAATTCTATCTTCTCCCATCTATACTTTTCACATTTACCAAGCTAATTCCATCCTACTTTCTTAATCTACTTTTTGTTATTATCGAGGAACTCAATTTTACAACTTTACATCCCAAACACAAACTTACTAGCAACATATTAACCTCATACTTATTAACTCTCCTCAATGGGTCAAACGCCCCATTGGTTTATGTCAAATCCATATCCTTCTAGAATGTGTTGAAAATGATCAAGTGTGGATAGAATGGATCAAGCTGATTGTTCGAATCAATTGCATTCCTTTCAGGAACTGGCTATGATAGAGGCAGAGGGGGTAGGAGTTACAGTCGAGGTCGGGGGCGGATAGGCGGACTAACAAGGGATGGTGGTGGGGGCGGTGGTAGAAACCAGGTTTAG

mRNA sequence

ATGGATAGGTACCAGAAGGTCGAGAAACCTAAACCTGAATCTCCGATAAACGAAAATGAAATCCGCATCACCAGTCAAGGCGCTATTCGAAACTACATCACTTATGCTTCCACCCTGCTTCAGGACAAACATGTTAAAGAGATAGTGTTGAAAGCCATGGGGCAGGCAATCAGTAAAGCGGTTGCCATTGCAGAAATTTTAAAGAAGAGAACTCCACGACTGCATCAAGAAACTTCCATCAGCTCAGTAAGCATAACTGATGTATGGGAACCTATTGAAGAAGGTCTTGTGCCTGTGGAGATGACTCGTCATGTCTCAATGATATCAATTACCTTGTCAAATCGAGAACTAAATAAAAACTCTCCTGGGTATCAGGCTCCACAATTTGTGGAGCAGCCAAAGCAACAATATAATCAACAGCAACAGCCCAGACAGTCTCGTCCTTATTACAATGCTGTTAATGAAGATCCATATCGCCAAAGCCGAGGTCGAGGTAGAGGGAGAGGGAGAGGTTGGGGCAGAGGTGGATATGGAAACTACCAAGGGGGATATGGCAACTCCCAGGGTGGATATGGCCACTACCAGGGTGGATACGGCCACTACCAGGGCGGATCTGGTTATTACCAAGGCGGATCTGGCCACTATCAAGGTGGATCTGGCCACTATCAAGGTGGATCAAGCGGCTACCAAGGTGGATCCGGCGGCTACCAAGGCAACTATCAAGATAATGGTGGGTACTCAAATTGGAGTAGAGGTGGTGGGCGAGGCAGGGGTTGGACATATCGTGGAACTGGCTATGATAGAGGCAGAGGGGGTAGGAGTTACAGTCGAGGTCGGGGGCGGATAGGCGGACTAACAAGGGATGGTGGTGGGGGCGGTGGTAGAAACCAGGTTTAG

Coding sequence (CDS)

ATGGATAGGTACCAGAAGGTCGAGAAACCTAAACCTGAATCTCCGATAAACGAAAATGAAATCCGCATCACCAGTCAAGGCGCTATTCGAAACTACATCACTTATGCTTCCACCCTGCTTCAGGACAAACATGTTAAAGAGATAGTGTTGAAAGCCATGGGGCAGGCAATCAGTAAAGCGGTTGCCATTGCAGAAATTTTAAAGAAGAGAACTCCACGACTGCATCAAGAAACTTCCATCAGCTCAGTAAGCATAACTGATGTATGGGAACCTATTGAAGAAGGTCTTGTGCCTGTGGAGATGACTCGTCATGTCTCAATGATATCAATTACCTTGTCAAATCGAGAACTAAATAAAAACTCTCCTGGGTATCAGGCTCCACAATTTGTGGAGCAGCCAAAGCAACAATATAATCAACAGCAACAGCCCAGACAGTCTCGTCCTTATTACAATGCTGTTAATGAAGATCCATATCGCCAAAGCCGAGGTCGAGGTAGAGGGAGAGGGAGAGGTTGGGGCAGAGGTGGATATGGAAACTACCAAGGGGGATATGGCAACTCCCAGGGTGGATATGGCCACTACCAGGGTGGATACGGCCACTACCAGGGCGGATCTGGTTATTACCAAGGCGGATCTGGCCACTATCAAGGTGGATCTGGCCACTATCAAGGTGGATCAAGCGGCTACCAAGGTGGATCCGGCGGCTACCAAGGCAACTATCAAGATAATGGTGGGTACTCAAATTGGAGTAGAGGTGGTGGGCGAGGCAGGGGTTGGACATATCGTGGAACTGGCTATGATAGAGGCAGAGGGGGTAGGAGTTACAGTCGAGGTCGGGGGCGGATAGGCGGACTAACAAGGGATGGTGGTGGGGGCGGTGGTAGAAACCAGGTTTAG

Protein sequence

MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKAVAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKNSPGYQAPQFVEQPKQQYNQQQQPRQSRPYYNAVNEDPYRQSRGRGRGRGRGWGRGGYGNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGYQGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGRIGGLTRDGGGGGGRNQV

Homology

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BLAST of ClCG07G001840 vs. NCBI nr
Match: XP_022963612.1 (protein FAM98A isoform X3 [Cucurbita moschata])

HSP 1 Score: 457.6 bits (1176), Expect = 8.2e-125
Identity = 263/304 (86.51%), Postives = 268/304 (88.16%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDK V+EIVLKAMGQAISK 
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKT 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V+IAEILKKRTP+LHQETSISSVSI DVWEPIEEGLVPVEMTRHVSMISITLSNRELNK+
Sbjct: 61  VSIAEILKKRTPQLHQETSISSVSIIDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKD 120

Query: 121 SPGYQAPQFVEQPKQQY--NQQQQPRQSRPYYNAVNEDPYRQSRGRGR--GRGRGWGRGG 180
           SPGYQAPQFVEQPKQQY   QQQQPRQSRPYYNAVNEDPY QSRGRGR  GRGRGWGRGG
Sbjct: 121 SPGYQAPQFVEQPKQQYKQQQQQQPRQSRPYYNAVNEDPYGQSRGRGRGGGRGRGWGRGG 180

Query: 181 YGNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGY 240
           YGNYQGGYGN QGGYGHYQGGYGHYQGG G+YQGGSG YQG             GG GGY
Sbjct: 181 YGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQG-------------GGPGGY 240

Query: 241 QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGR--IGGLTRDGGGGGG 299
           QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGR Y RGRGR  I G TRD   GG 
Sbjct: 241 QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRGYGRGRGRGQIDGQTRD--NGGS 289

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BLAST of ClCG07G001840 vs. NCBI nr
Match: KAG6571577.1 (Protein SULFUR DEFICIENCY-INDUCED 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 455.3 bits (1170), Expect = 4.1e-124
Identity = 262/304 (86.18%), Postives = 267/304 (87.83%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDK V+EIVLKAMGQAISK 
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKT 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V+IAEILKKRTP+LHQETSISSVSI DVWEPIEEGLVPVEMTRHVSMISITLSNRELNK+
Sbjct: 61  VSIAEILKKRTPQLHQETSISSVSIIDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKD 120

Query: 121 SPGYQAPQFVEQPKQQY--NQQQQPRQSRPYYNAVNEDPYRQSRGRGR--GRGRGWGRGG 180
           SPGYQAPQFVEQPKQQY   QQQQPRQSRPYYNAVNEDPY QSRGRGR  GRGRGWGRGG
Sbjct: 121 SPGYQAPQFVEQPKQQYKQQQQQQPRQSRPYYNAVNEDPYGQSRGRGRGGGRGRGWGRGG 180

Query: 181 YGNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGY 240
           YGNYQGGYGN QGGYGHYQGGYGHYQGG G+YQGGSG YQG             GG GGY
Sbjct: 181 YGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQG-------------GGPGGY 240

Query: 241 QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGR--IGGLTRDGGGGGG 299
           QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGR Y RGRGR  I G TRD   GG 
Sbjct: 241 QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRGYGRGRGRGQIDGQTRD--NGGS 289

[Close]

BLAST of ClCG07G001840 vs. NCBI nr
Match: XP_038887999.1 (ribonuclease P protein subunit p25-like isoform X9 [Benincasa hispida])

HSP 1 Score: 454.1 bits (1167), Expect = 9.1e-124
Identity = 259/300 (86.33%), Postives = 261/300 (87.00%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDK V+EIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPQFVEQPKQQYNQQ--QQPRQSRPYYNAVNEDPYRQSRGRGRGRGRGWGRGGYG 180
           SPGYQA QFVEQPKQQYNQQ  QQPRQSRPYYNAVNED Y QS+GRGRGRGRGWGRGGYG
Sbjct: 121 SPGYQASQFVEQPKQQYNQQQHQQPRQSRPYYNAVNEDLYGQSQGRGRGRGRGWGRGGYG 180

Query: 181 NYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGYQG 240
           NYQGGYGN QGGYGHYQGG GHYQGG                      S YQGGSGGYQG
Sbjct: 181 NYQGGYGNYQGGYGHYQGGSGHYQGG----------------------SSYQGGSGGYQG 240

Query: 241 NYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGRIGGLTRDGGGGGGRNQV 299
           NYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRG R YSRGRGRIGG T     GGGRNQV
Sbjct: 241 NYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGSRGYSRGRGRIGGRT----SGGGRNQV 274

[Close]

BLAST of ClCG07G001840 vs. NCBI nr
Match: XP_022159880.1 (protein FAM98A-like [Momordica charantia])

HSP 1 Score: 451.8 bits (1161), Expect = 4.5e-123
Identity = 260/301 (86.38%), Postives = 266/301 (88.37%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPE PINENEIRITSQGAIRNYITYASTLLQDK V+EIV KAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPEYPINENEIRITSQGAIRNYITYASTLLQDKRVREIVFKAMGQAISKA 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPQFVEQPKQQYN----QQQQPRQSRPYYNAVNEDPYRQSRGRGRGRGRGWGRGG 180
           SPGYQAP FVEQPKQQ+N    QQQQPRQ+RPYYNAVNEDPY QSRGRGRGRGRGWGRGG
Sbjct: 121 SPGYQAPHFVEQPKQQFNYQQQQQQQPRQARPYYNAVNEDPYGQSRGRGRGRGRGWGRGG 180

Query: 181 YGNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGY 240
           YGNYQGGYGN QGGYGHYQGGYG YQGGSG  QGGSG+YQ G     G  + YQGGS   
Sbjct: 181 YGNYQGGYGNYQGGYGHYQGGYGQYQGGSGNCQGGSGNYQQG-----GSGNNYQGGS--- 240

Query: 241 QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGRIGGLTRDGGGGGGRN 298
            G YQDNGGYSNW RGGGRGRGWTYRGTGYDRGRGGR Y RGRGR+GG TR  GGG GR 
Sbjct: 241 -GYYQDNGGYSNWGRGGGRGRGWTYRGTGYDRGRGGRGYGRGRGRMGGRTR--GGGAGRT 290

[Close]

BLAST of ClCG07G001840 vs. NCBI nr
Match: XP_023533405.1 (keratin, type I cytoskeletal 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.8 bits (1161), Expect = 4.5e-123
Identity = 259/300 (86.33%), Postives = 270/300 (90.00%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDK V+EIVLKAMGQAISK 
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGL+PVEMTR+VSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRYVSMISITLSNRELNKN 120

Query: 121 SPGYQAPQFVEQPKQQYN---QQQQPRQSRPYYNAVNEDPYRQSRGRGRGRGRGWGRGGY 180
           +PGYQAP  VEQPKQQYN   QQQQPRQSRPYYNA+NEDPY QSRGRGRGRGRGWGRGGY
Sbjct: 121 APGYQAPHVVEQPKQQYNLQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRGGY 180

Query: 181 GNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGYQ 240
           GNYQGGYGN QGGYG+YQGGYG+YQGG G YQGGSG+ QGGSG      +GYQGGSG   
Sbjct: 181 GNYQGGYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNGQGGSG------NGYQGGSG--- 240

Query: 241 GNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGRIGGLTRDGGGGGGRNQ 298
            NYQDNGGYSNW RGGGRGRGW YRG+GYDRGRGGR Y RGRGR+GG TR  GGG GRNQ
Sbjct: 241 DNYQDNGGYSNWGRGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTR--GGGVGRNQ 289

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BLAST of ClCG07G001840 vs. ExPASy Swiss-Prot
Match: Q9SL15 (Glycine-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=GRP3 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.0e-05
Identity = 53/91 (58.24%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 168 RGRGWGRGGY---GNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQG 227
           RG G   G Y   G YQGG GN QGG G+YQGG G+YQGG G YQGG G YQGG G YQG
Sbjct: 42  RGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGGGRYQG 101

Query: 228 GSSGYQGGSGGYQGNYQDNG----GYSNWSR 252
           G  G QGG GG  G+Y  +G    GY+  SR
Sbjct: 102 G-GGRQGG-GGSGGSYCRHGCCYRGYNGCSR 130

[Close]

BLAST of ClCG07G001840 vs. ExPASy TrEMBL
Match: A0A6J1HFQ0 (protein FAM98A isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111463892 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 4.0e-125
Identity = 263/304 (86.51%), Postives = 268/304 (88.16%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDK V+EIVLKAMGQAISK 
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKT 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V+IAEILKKRTP+LHQETSISSVSI DVWEPIEEGLVPVEMTRHVSMISITLSNRELNK+
Sbjct: 61  VSIAEILKKRTPQLHQETSISSVSIIDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKD 120

Query: 121 SPGYQAPQFVEQPKQQY--NQQQQPRQSRPYYNAVNEDPYRQSRGRGR--GRGRGWGRGG 180
           SPGYQAPQFVEQPKQQY   QQQQPRQSRPYYNAVNEDPY QSRGRGR  GRGRGWGRGG
Sbjct: 121 SPGYQAPQFVEQPKQQYKQQQQQQPRQSRPYYNAVNEDPYGQSRGRGRGGGRGRGWGRGG 180

Query: 181 YGNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGY 240
           YGNYQGGYGN QGGYGHYQGGYGHYQGG G+YQGGSG YQG             GG GGY
Sbjct: 181 YGNYQGGYGNYQGGYGHYQGGYGHYQGGYGHYQGGSGGYQG-------------GGPGGY 240

Query: 241 QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGR--IGGLTRDGGGGGG 299
           QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGR Y RGRGR  I G TRD   GG 
Sbjct: 241 QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRGYGRGRGRGQIDGQTRD--NGGS 289

[Close]

BLAST of ClCG07G001840 vs. ExPASy TrEMBL
Match: A0A6J1E011 (protein FAM98A-like OS=Momordica charantia OX=3673 GN=LOC111026164 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.2e-123
Identity = 260/301 (86.38%), Postives = 266/301 (88.37%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPE PINENEIRITSQGAIRNYITYASTLLQDK V+EIV KAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPEYPINENEIRITSQGAIRNYITYASTLLQDKRVREIVFKAMGQAISKA 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPQFVEQPKQQYN----QQQQPRQSRPYYNAVNEDPYRQSRGRGRGRGRGWGRGG 180
           SPGYQAP FVEQPKQQ+N    QQQQPRQ+RPYYNAVNEDPY QSRGRGRGRGRGWGRGG
Sbjct: 121 SPGYQAPHFVEQPKQQFNYQQQQQQQPRQARPYYNAVNEDPYGQSRGRGRGRGRGWGRGG 180

Query: 181 YGNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGY 240
           YGNYQGGYGN QGGYGHYQGGYG YQGGSG  QGGSG+YQ G     G  + YQGGS   
Sbjct: 181 YGNYQGGYGNYQGGYGHYQGGYGQYQGGSGNCQGGSGNYQQG-----GSGNNYQGGS--- 240

Query: 241 QGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGRIGGLTRDGGGGGGRN 298
            G YQDNGGYSNW RGGGRGRGWTYRGTGYDRGRGGR Y RGRGR+GG TR  GGG GR 
Sbjct: 241 -GYYQDNGGYSNWGRGGGRGRGWTYRGTGYDRGRGGRGYGRGRGRMGGRTR--GGGAGRT 290

[Close]

BLAST of ClCG07G001840 vs. ExPASy TrEMBL
Match: A0A6J1EY76 (glycine-rich RNA-binding protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437293 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.1e-122
Identity = 256/302 (84.77%), Postives = 265/302 (87.75%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDK V+EIVLKAMGQAISK 
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGL+PVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPQFVEQPKQQYN-----QQQQPRQSRPYYNAVNEDPYRQSRGRGRGRGRGWGRG 180
           +PGYQAP  VEQPKQQYN     QQQQPRQSRPYYNA+NEDPY QSRGRGRGRGRGWGRG
Sbjct: 121 APGYQAPHVVEQPKQQYNLQQQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRG 180

Query: 181 GYGNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGG 240
           GYGNYQGGYGN QGGYG+YQGGYG+YQGGSG YQGGSG             +GYQGGSG 
Sbjct: 181 GYGNYQGGYGNYQGGYGNYQGGYGNYQGGSGNYQGGSG-------------NGYQGGSG- 240

Query: 241 YQGNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGRIGGLTRDGGGGGGR 298
              NYQDNGGYSNW RGGGRGRGW YRG+GYDRGRGGR Y RGRGR+GG TR  GGG GR
Sbjct: 241 --DNYQDNGGYSNWGRGGGRGRGWAYRGSGYDRGRGGRGYVRGRGRMGGRTR--GGGVGR 284

[Close]

BLAST of ClCG07G001840 vs. ExPASy TrEMBL
Match: A0A6J1K2C9 (protein FAM98A-like OS=Cucurbita maxima OX=3661 GN=LOC111491085 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.3e-120
Identity = 253/300 (84.33%), Postives = 264/300 (88.00%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPESPI+ENEIRITSQGAIRNYITYASTLLQDK V+EIVLKAMGQAISK 
Sbjct: 1   MDRYQKVEKPKPESPISENEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKG 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGL+PVEMTRHVSMISITLSNRELNKN
Sbjct: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLIPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPQFVEQPKQQYN---QQQQPRQSRPYYNAVNEDPYRQSRGRGRGRGRGWGRGGY 180
           +PGYQAP  VEQPKQQYN   QQQQPRQSRPYYNA+NEDPY QSRGRGRGRGRGWGRGGY
Sbjct: 121 APGYQAPNVVEQPKQQYNLQQQQQQPRQSRPYYNAINEDPYGQSRGRGRGRGRGWGRGGY 180

Query: 181 GNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGYQ 240
           GNYQGGYGN QGGYG+YQGGYG+YQGGSG YQGGSG             +GYQGGSG   
Sbjct: 181 GNYQGGYGNYQGGYGNYQGGYGNYQGGSGNYQGGSG-------------NGYQGGSG--- 240

Query: 241 GNYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGRIGGLTRDGGGGGGRNQ 298
            NYQDNGG+SNW RGGGRGRGW YRG+GYDRGRGGR Y RGRGR+GG TR  G G GRNQ
Sbjct: 241 DNYQDNGGFSNWGRGGGRGRGWAYRGSGYDRGRGGRGYIRGRGRMGGRTR--GSGVGRNQ 282

[Close]

BLAST of ClCG07G001840 vs. ExPASy TrEMBL
Match: A0A6J1HRM7 (protein FAM98A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466871 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.1e-119
Identity = 250/300 (83.33%), Postives = 258/300 (86.00%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQKVEKPKPESP+N+NEIRITSQGAIRNYITYASTLLQDK V+EIVLKAMGQAISK 
Sbjct: 1   MDRYQKVEKPKPESPLNKNEIRITSQGAIRNYITYASTLLQDKRVREIVLKAMGQAISKT 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V+IAEILKKRTP+LHQETSISSVSI DVWEPIEEGLVPVEMTR+VSMISITLSNRELNK+
Sbjct: 61  VSIAEILKKRTPQLHQETSISSVSIIDVWEPIEEGLVPVEMTRYVSMISITLSNRELNKD 120

Query: 121 SPGYQAPQFVEQPKQQY--NQQQQPRQSRPYYNAVNEDPYRQSRGRGRGRGRGWGRGGYG 180
           SPGYQAPQFVEQPKQQY   QQQQPRQSRPYYNAVNEDPY QS+GRGRGRGRGWGRGGYG
Sbjct: 121 SPGYQAPQFVEQPKQQYKQQQQQQPRQSRPYYNAVNEDPYGQSQGRGRGRGRGWGRGGYG 180

Query: 181 NYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQGGSSGYQGGSGGYQG 240
           NYQGGYGN QGGYGHYQGGYGHYQGGSG YQG                    GG GGYQG
Sbjct: 181 NYQGGYGNYQGGYGHYQGGYGHYQGGSGGYQG--------------------GGPGGYQG 240

Query: 241 NYQDNGGYSNWSRGGGRGRGWTYRGTGYDRGRGGRSYSRGRGRIGGLTRDGGGGGGRNQV 299
           NYQDNGGYSNWSRGGGRGRGW YRGTGYDRGRGG  Y RGRGRI   TRD    G RNQV
Sbjct: 241 NYQDNGGYSNWSRGGGRGRGWIYRGTGYDRGRGGSGYDRGRGRIDRQTRD--NVGSRNQV 278

[Close]

BLAST of ClCG07G001840 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 191.8 bits (486), Expect = 7.8e-49
Identity = 179/362 (49.45%), Postives = 207/362 (57.18%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MDRYQ+V KPKPESPINENEIRITS+G IRNYI+YA++LLQ+K VK+IVLKAMGQAISK 
Sbjct: 1   MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           VAI+EILK + P LHQ+ +ISS+SITDVWEP EEGL PVE+TRHVSMISITLS  ELNK+
Sbjct: 61  VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120

Query: 121 SPGYQAPQFVEQPKQQYNQQQQPRQSRPYYNAVNED-------------PYRQSRGRGRG 180
           SPGYQAP   +Q K QY Q QQ RQ+R  YNA  E+                 ++G  + 
Sbjct: 121 SPGYQAPAQSDQSKPQY-QPQQGRQARLPYNAYGEEGEVVAEGEAGEEVDMETTKGVMKE 180

Query: 181 RGRG------------------------------WGRGGY-GNYQGGYGNSQ-GGYGHYQ 240
           + +G                               GRGGY G   GGYG  +  GYG  +
Sbjct: 181 KTKGTIKKIIKTMKVGIQTRAEAVDVVDEAMAIVGGRGGYGGGRDGGYGGGRDDGYGERR 240

Query: 241 G-GYGH-------------YQGG--SGYYQGGSGHYQGGSGHYQGG-----SSGYQGGSG 294
             GYG              Y GG   GY  G +  Y G  G ++GG       GY GG G
Sbjct: 241 NDGYGERRNDRYGGGRDDGYGGGRDDGYGGGRNDGYGGRRGGFRGGRGGGRDEGYGGGRG 300

[Close]

BLAST of ClCG07G001840 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 176.4 bits (446), Expect = 3.4e-44
Identity = 160/343 (46.65%), Postives = 184/343 (53.64%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MD+YQ+V KPK ++PI+ NEIRITSQG  RNYITYA TLLQDK   E+V KAMG+AI+K 
Sbjct: 1   MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V I E++K+R P LHQ TSI S  ITD WEP EEGL+P+E TRHVSMI+ITLS  ELN +
Sbjct: 61  VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNTS 120

Query: 121 SPGYQAPQFVEQPKQQYNQQQQPRQSRP-----------------------YYNAVNED- 180
           S GYQ P  +E  K   +   + R+  P                       Y N  +ED 
Sbjct: 121 SVGYQCPIPIELVKPMGDIDYEGREGSPGGRGRGRGRGRGRGRGRGGRGNAYVNVEHEDG 180

Query: 181 ------PYRQSRGRGRGR-GRGWGRGGYGNYQGGYGNSQ-GGYGH----------YQGGY 240
                  Y + RGRGRGR  RG GRGGY      Y   Q GGYG+           +GGY
Sbjct: 181 GWEREQSYGRGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDGGYGYDAPHEHRGYDDRGGY 240

Query: 241 GHYQGGSGYYQG--GSGHYQGGSGH--YQG---GSSGYQG---GSGGYQGNYQDNGGYSN 292
                G G Y G  G G Y G  G   Y G   G  GY G   G GGY G  Q  GGY  
Sbjct: 241 DAPPQGRGGYDGPQGRGGYDGPQGRRGYDGPPQGRGGYDGPSQGRGGYDGPSQGRGGYDG 300

[Close]

BLAST of ClCG07G001840 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-34
Identity = 144/320 (45.00%), Postives = 170/320 (53.12%), Query Frame = 0


Query: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQDKHVKEIVLKAMGQAISKA 60
           MD+YQ+VEKPK ++PI ENEIRITS G  RNYITYA  LLQ+    E++ KAMG+AI+K+
Sbjct: 1   MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60

Query: 61  VAIAEILKKRTPRLHQETSISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120
           V I E++K+R P LHQ TSI S  ITD WEP EEGL  +E TRHVSMI+ITLS  +LN +
Sbjct: 61  VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNTS 120

Query: 121 SPGYQAPQFVEQPKQQYNQQQQPRQSRPYYNAVNEDPYRQSRGRGRGRGRGWGRGGYGN- 180
           S GYQ P  +E  K       + +   P             RGRG GRGRG GRGG GN 
Sbjct: 121 SVGYQCPIPIEMVKPLAEIDYEGQDGSPRGRG-------GRRGRG-GRGRGRGRGGRGNG 180

Query: 181 -----------YQGGYGNSQGGYGHYQGGYGHYQGGSGY---------------YQGGSG 240
                       +GG GN      +  GG G    GSGY               Y  G G
Sbjct: 181 PANVEYDDGGRGRGGRGNGYVNNEYDDGGRGRGGRGSGYVNNEYNDGGMEQDRSYGRGRG 240

Query: 241 HYQGGSGHYQGGSSGYQGGSGGYQGNYQDNG--GYSNWSRGGGRG-RGWTYRGTGYDRGR 291
             +GG G    G  GY G    Y    QD G  GY+N +     G  G   +G G  RGR
Sbjct: 241 RGRGG-GRGGRGRGGYNGPPPPYYEAQQDGGDYGYNNVAPPADHGYDGPPPQGRGRGRGR 300

[Close]

BLAST of ClCG07G001840 vs. TAIR 10
Match: AT2G05520.1 (glycine-rich protein 3 )

HSP 1 Score: 50.4 bits (119), Expect = 2.8e-06
Identity = 53/91 (58.24%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 168 RGRGWGRGGY---GNYQGGYGNSQGGYGHYQGGYGHYQGGSGYYQGGSGHYQGGSGHYQG 227
           RG G   G Y   G YQGG GN QGG G+YQGG G+YQGG G YQGG G YQGG G YQG
Sbjct: 42  RGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGGGRYQG 101

Query: 228 GSSGYQGGSGGYQGNYQDNG----GYSNWSR 252
           G  G QGG GG  G+Y  +G    GY+  SR
Sbjct: 102 G-GGRQGG-GGSGGSYCRHGCCYRGYNGCSR 130

[Close]

BLAST of ClCG07G001840 vs. TAIR 10
Match: AT2G05440.2 (GLYCINE RICH PROTEIN 9 )

HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04
Identity = 49/103 (47.57%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 160 QSRGRGRGRGRGWGRGGYGNYQGGYGNSQGGYGH----YQGGYGHYQGGSGYYQGGSGHY 219
           Q  G G G G   G GG G +  G+G   GG GH    Y GG GHY GG G+Y GG GHY
Sbjct: 39  QPEGYGGGHGGHGGHGGGGGH--GHGGHNGGGGHGLDGYGGGGGHYGGGGGHYGGGGGHY 98

Query: 220 QGGSGHYQGGSSGYQGGSGGYQGNYQDNGGYSNWSRGGGRGRG 259
            GG GHY GG   Y GG GG+ G     GG   +  GGG   G
Sbjct: 99  GGGGGHYGGGGGHYGGGGGGHGGGGHYGGGGGGYGGGGGHHGG 139

The following BLAST results are available for this feature:

BLAST of ClCG07G001840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963612.1	8.2e-125	86.51	protein FAM98A isoform X3 [Cucurbita moschata]	[more]
KAG6571577.1	4.1e-124	86.18	Protein SULFUR DEFICIENCY-INDUCED 1, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_038887999.1	9.1e-124	86.33	ribonuclease P protein subunit p25-like isoform X9 [Benincasa hispida]	[more]
XP_022159880.1	4.5e-123	86.38	protein FAM98A-like [Momordica charantia]	[more]
XP_023533405.1	4.5e-123	86.33	keratin, type I cytoskeletal 9-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG07G001840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SL15	4.0e-05	58.24	Glycine-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=GRP3 PE=1 SV=1	[more]

BLAST of ClCG07G001840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFQ0	4.0e-125	86.51	protein FAM98A isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111463892 PE=4 SV=...	[more]
A0A6J1E011	2.2e-123	86.38	protein FAM98A-like OS=Momordica charantia OX=3673 GN=LOC111026164 PE=4 SV=1	[more]
A0A6J1EY76	4.1e-122	84.77	glycine-rich RNA-binding protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1K2C9	1.3e-120	84.33	protein FAM98A-like OS=Cucurbita maxima OX=3661 GN=LOC111491085 PE=4 SV=1	[more]
A0A6J1HRM7	1.1e-119	83.33	protein FAM98A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466871 PE=4 ...	[more]

BLAST of ClCG07G001840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07030.1	7.8e-49	49.45	Alba DNA/RNA-binding protein	[more]
AT1G76010.1	3.4e-44	46.65	Alba DNA/RNA-binding protein	[more]
AT1G20220.1	1.9e-34	45.00	Alba DNA/RNA-binding protein	[more]
AT2G05520.1	2.8e-06	58.24	glycine-rich protein 3	[more]
AT2G05440.2	1.5e-04	47.57	GLYCINE RICH PROTEIN 9	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 19..82 e-value: 2.1E-17 score: 62.6
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 14..117 e-value: 6.4E-34 score: 117.8
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 16..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..172
None	No IPR available	PANTHER	PTHR13516	RIBONUCLEASE P SUBUNIT P25	coord: 1..282
None	No IPR available	PANTHER	PTHR13516:SF3	ALBA DNA/RNA-BINDING PROTEIN	coord: 1..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G001840.2	ClCG07G001840.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding