ClCG06G017330 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G017330
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	U-box domain-containing protein 33-like
Location	CG_Chr06: 30548137 .. 30552628 (+)
RNA-Seq Expression	ClCG06G017330
Synteny	ClCG06G017330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCACCTCCGCCTCCTCTTTCTCGGCCATAGTATGGAACTGGAGGAGGTTGATAGCCTTTGTACAAGGATTCACGCCCTACTATTGGCGGTGGCGCAGCAGGCTGTAAACCCACTAGGTCACTGCGCAAGAAATATCAAAAGTCACCCAGAAAAGGGTAGAGAGATCAGAAACACCATAGAGAAATCAAGGATAAGAAGGAGAGCTTCAAAGTACGAACATTACCTTCGGCGCTCGCGGTAGGAATTGGGATCGGCGTATCTATGGTCATAAGGATTCATGACTCTAGGATTTCGAAAGTGGAAGAAACGGAGTAGTCTAGTTCAGTGGTGGAATTTGAAACGGAAGATACCCGACCGGCCGTAGCCTTCAGAATTTCTTACTATTCCGGTTCGAAGTATTCAAGATCTACAGGCAAGAAGAGGAAGAAGAAGGGTCCATGTTTAGAGAAGAGAACAAAACAAAGTATGGAAATTACTCGGTCGGTGCCAATAATGATGGGCCTCGAGGCCCAATACAAATCGGCCGTGGGCTTACGGTCGAATTGGACGAGATCCAAAATTTAGGCCCATTTACACAATCGGGAGGTTCACAGGGCGGGAACACTTCTACGCCCCCCGTCCCCAACAGAATTTCTAAGGAAAAATGCAATAAAGTTGTTTCGATTTTGATGTTTTAAATGTTATATATTTAGACTTTCGTTTTTGGTTATTATTTGTTTTTTATTTTTATTTTTTTATAAAAAACTAAACTTATTTTCTCTCAATTTTTTACCCTAATTTACATCATTTTAAGTGCACGAGTTGAATTCTTAATCGAATTCTACAAACAAAAACAAATTTTTAAAAGCTATTTTTTTAGTTTTCATTCTTTAATTGCACGAGGTGGTATCAATGTTTATAGGCTTACTTTTCAAAAACGAAAAATAAAAAACCAAATAATTACCAAACTCGGCCTTAGTTTTTTTAGTTTGATTTCAATGTAGTCTCTAAATTTTAAAATGGTACAATTTTATCATTTAGATTTGAATTTCGTTTCAATTTAATCCCTACATTCAAAAGAAAAATAGTTGTGACTTGTGAGAGTTCAAATATAATCAACAATGCATTTTTTTCTTTAATTTAAATTTACATTAATCATTACCTCGAGATACATGAGAAAATAAAATCCTAGCGAATGGTATAATTTCTCTAGCCTTTGCTTTTAGATATAAATTGACATAAGAAAGTTTAATTTTCTTTTTTAATTAGAGCGATGATTCAAACATGTAATGCGCTTAAGATTTTGTTTGATATATTTTTTTTTATAATAAATATATTAAAATTAAGAGAATTATTAGATTTATTGAAGTTTTTTTTTTTATTGACAGAACCAAAAGTAAAGTTTCACTTGGATCAGAATGATGGACACCTACCAAAGTCATATTTTATGTGTCTTTAGATGAGGCTTATCTTGTTGTTTTGAAGAAAAATGAAGAGAAGTTAGAAAAGACTATACAGCTTCTCGAAGAATCTCTAGTGGCTGCATGTGCCACCACATCATCATATTCTATATTGGTCCCCATGACAAGTATGCAAATATTAAAGATTAATTGTGACAACCACCCATTCTAAATTTTTTTTTTCCTTTTTTATTTATAAGTATTTGTAGTCCAACTTACGACCATCTCGACTGATTTTATTGGACAACTCGCCTAATCATACAATACTTGATGTTAAAAAAACTCGTAAGATATTAAATTCTAAGTAGGTGGTTACCATAGATTGAACTCTTAATCGTGATGATTTGTTAATGTTTTTCATTTTTTCTTTCACCTTCGATATTCCTAAAAATGAATGGTTGGTAAGATCTAGAAATTGGCTCCGTTGTTTTTCTTAGAATATAGGTAACTAAAAGCTAGCTATCAAGTTGATTCAAAAGGATGAAAAAGTGTGGGAGGAAACAGAAAAATCAAACTGATAAGATCTTGTCAATCTTTTCAACTAAAGAGTTCTTTAATTCATGTGGTTAAAGCCTAGGGAAATAAAGGTCAAACTTTTCACTTTGAGAGGAGCAAAATCAAAAAGAATTTCTTTGGTTTTTTCACCTCTTTTGTTTGACTTAAACAAACACACACAACAAGGAGGAAAAAAAAAAAAAAAAAAAAAACAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAGCAAATGTTGACAGAACAAGAGAATCTATCCTCTCTTTTCTCTCTTTTCCTTTGTGGTTATGAGAGCAAAAATGTCTTTTCCTTTGTATACTTCCAACCCACTAAAACACATCCTTCTCATTTTCATTCTCAATTCTCATTCTCATTCTCATTGTTCTTTGTGCATACAGAGAGCAAAAGAGAAAGAGAGTTAAGAATGGAAGAAGAGTTTCAAGGGAGAGCAGCAGAGTTGCAACTCCAATACTACAGTGCAAGGATAATGTCCCCGGAAATCGTCGAGATTTGAGACGAAAGTAAGACTATTATTAGTAGCAGAGACGGCGGGGCAACCGATGTCTACGTCGCCGTCGGTAAAGATGACATAGATGTGCTTAAATGGGCCCTTGATCATGTTGTCTCACCTGGTTGTTGTGTATTTCTTGTCCATGTTTTTCCTCCTCTCACCTGTATCACTACACCAGGTAATCAAGATTTATGCTTTCTTTCCCTTTTTCCATCTTTCAAATCATAATCACACATCACTCAACCATTTTCCTTGGATGCTTTTCTTGCATAATCTGTCCGTTAAAAAATCGACAATCAAAGATAAACAAAAATTAATACAGAGATTTATGCGGTTCACAAACAGTGTGTTAATTATGTACACGGATAGAAGAAGAGAGCAGTTTATTAGATTACAAATTCAGAGGCATAATGCACTCCTCTAAACCCTTGAACCGAAATCGTAAATAACGTAAATATAAATACAAAGCATTCAAACACTGGTTTGATGCACATGGACCATATGGTAATGTATATATTTTCTTCCTTCTTCATCTTTTGATTGCCTGTGTTCCTTCCAAAAGAGTCAAACTCAAGCATAGATTGTAAAGATAAATTCTTATTTATAGGAAGAAAACTAAGTACAAAATTTGCTGAAGCTAAAGTGATCCTCTCCTCTTGTGGTTGAACAAAACATATTCTTGTTTATGCAATGAAAATTCTGTTCAAACACACAAGACAAGAAAAAGATATGATGAAGAGAATGTTAGCCATATTCATTGGGTTGAAATTCATGTATGTTCATGAATTGTTGTGAGTTGCAGAATTTTTACTTGCAAACCTATTTTGGTTTTCAGTTGGAAGATTAGCAAGGAGTCAACTAAGCCAAGAACAATTGAGAGTGTATATCAATGAAGAAAACAACAGAAGGAGAAATCTATTGCAAAAATACATCCGCTTATGCACTGATTCCAAGGTATTCCTAATTCTACTTTCCCTCTCTCGTCTACTGATATGAGCCACGGGTTCAGCAATTGTTGGAGTATCTACGTGTCGAATACGGATAAACTAACCAAATTAAAGTGTTCGTGCTTCTTAATAAAACATGGAAAAGGGGGAAAACTAATCTGAAACCTTAAACTCTCTGCTCCTAATTCCCATGTCTCAGGTGACAGTGGACACATTGCTTTTGGAGAGCAACACAACAGCCAAAGCAATCCTTCAACTATTCCAGTGCTCAATATCACCAATTTGGTCATAGGGACCAAAAAGCCACTTTCCACGAAGTTTGGAACTTTTCTTTTTTAATCCATTTTTTGGGTTTTTTTTCTCTTCAAATTGTTATCTGATTTGTGCAATTTCTTGATAGGCTACTTGGGAAAAGAATCGCAAAAGGAGAGTATGTGAAAAAGAACGCACCAAAATTTTGTGAGGTTACCATTGTTTATGAAGGCAAGAAAGTGGAAGAGTGTCAACAGGAAATGGGGTTGCTTCCTTCTTCTGAAGATTCCGATTGCCGGCGGCGGCGACGCTCTGGGAAGAACTTGTTAGAGTGGGTCTGCTTGTCGAGCAGGTCGGGTTGCGATTAA

mRNA sequence

AAGCACCTCCGCCTCCTCTTTCTCGGCCATAGTATGGAACTGGAGGAGGTTGATAGCCTTTGTACAAGGATTCACGCCCTACTATTGGCGGTGGCGCAGCAGGCTGTAAACCCACTAGGTCACTGCGCAAGAAATATCAAAAGTCACCCAGAAAAGGGTAGAGAGATCAGAAACACCATAGAGAAATCAAGGATAAGAAGGAGAGCTTCAAAGTACGAACATTACCTTCGGCGCTCGCGGTAGGAATTGGGATCGGCGTATCTATGGTCATAAGGATTCATGACTCTAGGATTTCGAAAGTGGAAGAAACGGAGTAGTCTAGTTCAGTGGTGGAATTTGAAACGGAAGATACCCGACCGGCCGTAGCCTTCAGAATTTCTTACTATTCCGGTTCGAAGTATTCAAGATCTACAGGCAAGAAGAGGAAGAAGAAGGGTCCATGTTTAGAGAAGAGAACAAAACAAAGTATGGAAATTACTCGGTCGGTGCCAATAATGATGGGCCTCGAGGCCCAATACAAATCGGCCGTGGGCTTACGGTCGAATTGGACGAGATCCAAAATTTAGGCCCATTTACACAATCGGGAGATGAGGCTTATCTTGTTGTTTTGAAGAAAAATGAAGAGAAGTTAGAAAAGACTATACAGCTTCTCGAAGAATCTCTAGTGGCTGCATGTGCCACCACATCATCATATTCTATATTGGTCCCCATGACAAACGAAAGTAAGACTATTATTAGTAGCAGAGACGGCGGGGCAACCGATGTCTACGTCGCCGTCGGTAAAGATGACATAGATGTGCTTAAATGGGCCCTTGATCATGTTGTCTCACCTGGTTGTTGTGTATTTCTTGTCCATGTTTTTCCTCCTCTCACCTGTATCACTACACCAGTTGGAAGATTAGCAAGGAGTCAACTAAGCCAAGAACAATTGAGAGTGTATATCAATGAAGAAAACAACAGAAGGAGAAATCTATTGCAAAAATACATCCGCTTATGCACTGATTCCAAGGTGACAGTGGACACATTGCTTTTGGAGAGCAACACAACAGCCAAAGCAATCCTTCAACTATTCCAGGACCAAAAAGCCACTTTCCACGAAGCTACTTGGGAAAAGAATCGCAAAAGGAGAGAAATGGGGTTGCTTCCTTCTTCTGAAGATTCCGATTGCCGGCGGCGGCGACGCTCTGGGAAGAACTTGTTAGAGTGGGTCTGCTTGTCGAGCAGGTCGGGTTGCGATTAA

Coding sequence (CDS)

ATGTTTAGAGAAGAGAACAAAACAAAGTATGGAAATTACTCGGTCGGTGCCAATAATGATGGGCCTCGAGGCCCAATACAAATCGGCCGTGGGCTTACGGTCGAATTGGACGAGATCCAAAATTTAGGCCCATTTACACAATCGGGAGATGAGGCTTATCTTGTTGTTTTGAAGAAAAATGAAGAGAAGTTAGAAAAGACTATACAGCTTCTCGAAGAATCTCTAGTGGCTGCATGTGCCACCACATCATCATATTCTATATTGGTCCCCATGACAAACGAAAGTAAGACTATTATTAGTAGCAGAGACGGCGGGGCAACCGATGTCTACGTCGCCGTCGGTAAAGATGACATAGATGTGCTTAAATGGGCCCTTGATCATGTTGTCTCACCTGGTTGTTGTGTATTTCTTGTCCATGTTTTTCCTCCTCTCACCTGTATCACTACACCAGTTGGAAGATTAGCAAGGAGTCAACTAAGCCAAGAACAATTGAGAGTGTATATCAATGAAGAAAACAACAGAAGGAGAAATCTATTGCAAAAATACATCCGCTTATGCACTGATTCCAAGGTGACAGTGGACACATTGCTTTTGGAGAGCAACACAACAGCCAAAGCAATCCTTCAACTATTCCAGGACCAAAAAGCCACTTTCCACGAAGCTACTTGGGAAAAGAATCGCAAAAGGAGAGAAATGGGGTTGCTTCCTTCTTCTGAAGATTCCGATTGCCGGCGGCGGCGACGCTCTGGGAAGAACTTGTTAGAGTGGGTCTGCTTGTCGAGCAGGTCGGGTTGCGATTAA

Protein sequence

MFREENKTKYGNYSVGANNDGPRGPIQIGRGLTVELDEIQNLGPFTQSGDEAYLVVLKKNEEKLEKTIQLLEESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKATFHEATWEKNRKRREMGLLPSSEDSDCRRRRRSGKNLLEWVCLSSRSGCD

Homology

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BLAST of ClCG06G017330 vs. NCBI nr
Match: XP_038879425.1 (U-box domain-containing protein 33-like [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 3.8e-65
Identity = 152/249 (61.04%), Postives = 168/249 (67.47%), Query Frame = 0


Query: 61  EEKLEKTIQLLEESLVAA-------CATTSSYSILVPMTNESKTIISSRDGGATDVYVAV 120
           E K E+ +++ EE    A       C+       ++ + +ESKTIISSRDG ATDVYVAV
Sbjct: 4   ESKRERELRMEEEFQGRAAELQLQYCSARIMSPEIIEIEDESKTIISSRDGDATDVYVAV 63

Query: 121 GKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENN 180
           GKDDIDVL+WALDH VSPGCCVFLVHVFPPLT I+TPVGRLARSQLSQEQLRVY NEENN
Sbjct: 64  GKDDIDVLQWALDHAVSPGCCVFLVHVFPPLTYISTPVGRLARSQLSQEQLRVYTNEENN 123

Query: 181 RRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT---------------- 240
           RRRNLLQKYIRLCTD+KV+VD LLLESNTTAKAILQL      T                
Sbjct: 124 RRRNLLQKYIRLCTDTKVSVDALLLESNTTAKAILQLIPVLNITNLVIGTKKPLSTKLLG 183

Query: 241 ---------------FHEATWEKNRKR-----REMGLLPSSEDSDCRRRRRSGKNLLEWV 267
                          F E T     K+     REMGLLPSSEDSDC+ RRRS KNL EWV
Sbjct: 184 KRMAKGEFVKKNAPEFCEVTIVYEGKKVDECQREMGLLPSSEDSDCQPRRRSSKNLFEWV 243

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BLAST of ClCG06G017330 vs. NCBI nr
Match: XP_038876192.1 (U-box domain-containing protein 33-like [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 3.8e-65
Identity = 147/230 (63.91%), Postives = 161/230 (70.00%), Query Frame = 0


Query: 73  ESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPG 132
           E  +  C+       +V +  ESK+IISSRD GATDVYVAVGKDDIDVLKWAL+H V+PG
Sbjct: 11  ELQLQCCSARIMSPEIVEIGEESKSIISSRDSGATDVYVAVGKDDIDVLKWALNHAVTPG 70

Query: 133 CCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVT 192
           CCVFLVHVFPPLT I TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTD+KVT
Sbjct: 71  CCVFLVHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVT 130

Query: 193 VDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEA 252
           VDTLLLESNTTAKAILQL      T                               F E 
Sbjct: 131 VDTLLLESNTTAKAILQLIPVLNITNLVIGTKKPLSTRLLGKRMTKGEFVKKNAPEFCEV 190

Query: 253 T-----WEKNRKRREMGLLPSSEDSDCRRRRRSGKNLLEWVCLSSRSGCD 267
           T      + + +++EMGLL SS+DSDC RRRRSGKNL EWVCLS RSGCD
Sbjct: 191 TIVYEGKKVDERQQEMGLLSSSQDSDCGRRRRSGKNLFEWVCLSRRSGCD 240

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BLAST of ClCG06G017330 vs. NCBI nr
Match: XP_022135422.1 (U-box domain-containing protein 33-like [Momordica charantia])

HSP 1 Score: 255.4 bits (651), Expect = 5.5e-64
Identity = 147/215 (68.37%), Postives = 157/215 (73.02%), Query Frame = 0


Query: 88  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCI 147
           +V +  ESKTIISSRD GA DVYVAVGKDDIDVLKWALDH VSPGCCVFLVHVFPPLT I
Sbjct: 27  IVEIGEESKTIISSRDSGANDVYVAVGKDDIDVLKWALDHAVSPGCCVFLVHVFPPLTYI 86

Query: 148 TTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAI 207
            TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTD+KVTVDTLLLESNTTAKAI
Sbjct: 87  PTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVTVDTLLLESNTTAKAI 146

Query: 208 LQLFQDQKAT-------------------------------FHEAT--WEKNR---KRRE 267
           LQL      T                               F E T  +E  +   +++E
Sbjct: 147 LQLIPVLNITNLVIGTKKPLSTRLLGKRMAKGEFVKKNAPDFCEVTIVYEGRKVDDRQQE 206

[Close]

BLAST of ClCG06G017330 vs. NCBI nr
Match: XP_004138091.1 (U-box domain-containing protein 52 [Cucumis sativus] >KGN63540.1 hypothetical protein Csa_013542 [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 8.8e-62
Identity = 143/215 (66.51%), Postives = 156/215 (72.56%), Query Frame = 0


Query: 88  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCI 147
           +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I
Sbjct: 26  IVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHAVSPGCCVFLLHVFPPLTYI 85

Query: 148 TTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAI 207
            TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTD+KVTVDTLLLESNTTAKAI
Sbjct: 86  PTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVTVDTLLLESNTTAKAI 145

Query: 208 LQLFQDQKAT-------------------------------FHEAT-----WEKNRKRRE 267
           LQL      T                               + E T      + N  ++E
Sbjct: 146 LQLIPVLNITNLVIGTKKPLSSKLLGKRMTKGEFVKKNAPEYCEVTVVYEGKKVNECQQE 205

[Close]

BLAST of ClCG06G017330 vs. NCBI nr
Match: KAA0057823.1 (U-box domain-containing protein 33-like [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 2.0e-61
Identity = 143/215 (66.51%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 88  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCI 147
           +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I
Sbjct: 26  IVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHAVSPGCCVFLLHVFPPLTYI 85

Query: 148 TTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAI 207
            TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTD+KVTVDTLLLE NTTAKAI
Sbjct: 86  PTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVTVDTLLLEGNTTAKAI 145

Query: 208 LQLFQDQKAT-------------------------------FHEAT-----WEKNRKRRE 267
           LQL      T                               + E T      + N  ++E
Sbjct: 146 LQLIPVLNITNLVIGTKKPLSTKLLGKRMTKGEFVKKNAPEYCEVTIVYEGKKVNECQQE 205

[Close]

BLAST of ClCG06G017330 vs. ExPASy TrEMBL
Match: A0A6J1C2N1 (U-box domain-containing protein 33-like OS=Momordica charantia OX=3673 GN=LOC111007380 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.7e-64
Identity = 147/215 (68.37%), Postives = 157/215 (73.02%), Query Frame = 0


Query: 88  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCI 147
           +V +  ESKTIISSRD GA DVYVAVGKDDIDVLKWALDH VSPGCCVFLVHVFPPLT I
Sbjct: 27  IVEIGEESKTIISSRDSGANDVYVAVGKDDIDVLKWALDHAVSPGCCVFLVHVFPPLTYI 86

Query: 148 TTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAI 207
            TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTD+KVTVDTLLLESNTTAKAI
Sbjct: 87  PTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVTVDTLLLESNTTAKAI 146

Query: 208 LQLFQDQKAT-------------------------------FHEAT--WEKNR---KRRE 267
           LQL      T                               F E T  +E  +   +++E
Sbjct: 147 LQLIPVLNITNLVIGTKKPLSTRLLGKRMAKGEFVKKNAPDFCEVTIVYEGRKVDDRQQE 206

[Close]

BLAST of ClCG06G017330 vs. ExPASy TrEMBL
Match: A0A0A0LNU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004060 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 4.3e-62
Identity = 143/215 (66.51%), Postives = 156/215 (72.56%), Query Frame = 0


Query: 88  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCI 147
           +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I
Sbjct: 26  IVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHAVSPGCCVFLLHVFPPLTYI 85

Query: 148 TTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAI 207
            TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTD+KVTVDTLLLESNTTAKAI
Sbjct: 86  PTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVTVDTLLLESNTTAKAI 145

Query: 208 LQLFQDQKAT-------------------------------FHEAT-----WEKNRKRRE 267
           LQL      T                               + E T      + N  ++E
Sbjct: 146 LQLIPVLNITNLVIGTKKPLSSKLLGKRMTKGEFVKKNAPEYCEVTVVYEGKKVNECQQE 205

[Close]

BLAST of ClCG06G017330 vs. ExPASy TrEMBL
Match: A0A5A7UPM8 (U-box domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001080 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 9.5e-62
Identity = 143/215 (66.51%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 88  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCI 147
           +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I
Sbjct: 26  IVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHAVSPGCCVFLLHVFPPLTYI 85

Query: 148 TTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAI 207
            TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTD+KVTVDTLLLE NTTAKAI
Sbjct: 86  PTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVTVDTLLLEGNTTAKAI 145

Query: 208 LQLFQDQKAT-------------------------------FHEAT-----WEKNRKRRE 267
           LQL      T                               + E T      + N  ++E
Sbjct: 146 LQLIPVLNITNLVIGTKKPLSTKLLGKRMTKGEFVKKNAPEYCEVTIVYEGKKVNECQQE 205

[Close]

BLAST of ClCG06G017330 vs. ExPASy TrEMBL
Match: A0A5D3BHA8 (U-box domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001100 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 142/215 (66.05%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 88  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCI 147
           +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I
Sbjct: 26  IVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHAVSPGCCVFLLHVFPPLTYI 85

Query: 148 TTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAI 207
            TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTD+KVTVDTLLLE NTTAKAI
Sbjct: 86  PTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVTVDTLLLEGNTTAKAI 145

Query: 208 LQLFQDQKAT-------------------------------FHEAT-----WEKNRKRRE 267
           LQL      T                               + E T      + N  ++E
Sbjct: 146 LQLIPVLNITNLVIGTKKPLSTKLLGKRMTKGEFVKKNAPEYCEVTIVYEGKKVNECQQE 205

[Close]

BLAST of ClCG06G017330 vs. ExPASy TrEMBL
Match: A0A1S3CN70 (U-box domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103502375 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 142/215 (66.05%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 88  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCI 147
           +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I
Sbjct: 26  IVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHAVSPGCCVFLLHVFPPLTYI 85

Query: 148 TTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAI 207
            TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTD+KVTVDTLLLE NTTAKAI
Sbjct: 86  PTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVTVDTLLLEGNTTAKAI 145

Query: 208 LQLFQDQKAT-------------------------------FHEAT-----WEKNRKRRE 267
           LQL      T                               + E T      + N  ++E
Sbjct: 146 LQLIPVLNITNLVIGTKKPLSTKLLGKRMTKGEFVKKNAPEYCEVTIVYEGKKVNECQQE 205

[Close]

BLAST of ClCG06G017330 vs. TAIR 10
Match: AT5G47740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-18
Identity = 47/109 (43.12%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 105 GATDVYVAVGKDD--IDVLKWALDHVV-SPGCCVFLVHVFPPLTCITTPVGRLARSQLSQ 164
           G  +VYV VGK D  ++ L+WA+D+++ S    +FL+HVFP    I  P+GR+ R + SQ
Sbjct: 41  GEDNVYVGVGKGDSSMEALRWAIDNLMTSSSTLLFLIHVFPETRFIPYPLGRITRERASQ 100

Query: 165 EQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQL 211
           EQ+  ++++E  +RR LL K++  C+ SKV V+T+L+ES++ AKA+  L
Sbjct: 101 EQVESFMSQEREKRRTLLLKFLHACSASKVKVETILVESDSVAKAVQDL 149

[Close]

BLAST of ClCG06G017330 vs. TAIR 10
Match: AT5G47740.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 4.1e-17
Identity = 47/111 (42.34%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 105 GATDVYVAVGKDD--IDVLKWALDHVV-SPGCCVFLVHVFPPLTCITTPVGRLARSQLSQ 164
           G  +VYV VGK D  ++ L+WA+D+++ S    +FL+HVFP    I  P+GR+ R + SQ
Sbjct: 41  GEDNVYVGVGKGDSSMEALRWAIDNLMTSSSTLLFLIHVFPETRFIPYPLGRITRERASQ 100

Query: 165 EQLRVYINEENNRRRNLLQKYIRLCTDSK--VTVDTLLLESNTTAKAILQL 211
           EQ+  ++++E  +RR LL K++  C+ SK  V V+T+L+ES++ AKA+  L
Sbjct: 101 EQVESFMSQEREKRRTLLLKFLHACSASKEQVKVETILVESDSVAKAVQDL 151

[Close]

BLAST of ClCG06G017330 vs. TAIR 10
Match: AT3G61390.1 (RING/U-box superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.1e-04
Identity = 37/154 (24.03%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 67  TIQLLEESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDID---VLKW 126
           T+++  + +V    +  S+ I +P + E    I+ ++     +YVAV + D++    L W
Sbjct: 2   TLKIPIQEMVKMVGSLRSHGIDIPESME----INKKE----KIYVAVTEKDLESKSSLVW 61

Query: 127 ALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYI 186
           A+ +      C+  VHV  P          +      +++LR+Y  E++   +N  +KY+
Sbjct: 62  AIQNSGGKEFCI--VHVHQP----------IPGEMFHEQKLRLYRKEKDKAHKN-SEKYL 121

Query: 187 RLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT 218
           ++C   +VT + + +E+++  K ILQL   +  T
Sbjct: 122 QICRQMQVTAEIIYIETDSVEKGILQLISQRGVT 134

[Close]

BLAST of ClCG06G017330 vs. TAIR 10
Match: AT3G61390.2 (RING/U-box superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.1e-04
Identity = 37/154 (24.03%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 67  TIQLLEESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDID---VLKW 126
           T+++  + +V    +  S+ I +P + E    I+ ++     +YVAV + D++    L W
Sbjct: 2   TLKIPIQEMVKMVGSLRSHGIDIPESME----INKKE----KIYVAVTEKDLESKSSLVW 61

Query: 127 ALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYI 186
           A+ +      C+  VHV  P          +      +++LR+Y  E++   +N  +KY+
Sbjct: 62  AIQNSGGKEFCI--VHVHQP----------IPGEMFHEQKLRLYRKEKDKAHKN-SEKYL 121

Query: 187 RLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT 218
           ++C   +VT + + +E+++  K ILQL   +  T
Sbjct: 122 QICRQMQVTAEIIYIETDSVEKGILQLISQRGVT 134

The following BLAST results are available for this feature:

BLAST of ClCG06G017330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879425.1	3.8e-65	61.04	U-box domain-containing protein 33-like [Benincasa hispida]	[more]
XP_038876192.1	3.8e-65	63.91	U-box domain-containing protein 33-like [Benincasa hispida]	[more]
XP_022135422.1	5.5e-64	68.37	U-box domain-containing protein 33-like [Momordica charantia]	[more]
XP_004138091.1	8.8e-62	66.51	U-box domain-containing protein 52 [Cucumis sativus] >KGN63540.1 hypothetical pr...	[more]
KAA0057823.1	2.0e-61	66.51	U-box domain-containing protein 33-like [Cucumis melo var. makuwa]	[more]

BLAST of ClCG06G017330 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG06G017330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2N1	2.7e-64	68.37	U-box domain-containing protein 33-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0LNU1	4.3e-62	66.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004060 PE=4 SV=1	[more]
A0A5A7UPM8	9.5e-62	66.51	U-box domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BHA8	2.1e-61	66.05	U-box domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CN70	2.1e-61	66.05	U-box domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103502375 ...	[more]

BLAST of ClCG06G017330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47740.1	1.3e-18	43.12	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT5G47740.2	4.1e-17	42.34	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G61390.1	3.1e-04	24.03	RING/U-box superfamily protein	[more]
AT3G61390.2	3.1e-04	24.03	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 54..74
None	No IPR available	PANTHER	PTHR47382:SF1	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	coord: 83..211
None	No IPR available	PANTHER	PTHR47382	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	coord: 83..211
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 115..216
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 109..218 e-value: 2.2E-6 score: 30.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G017330.2	ClCG06G017330.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity