ClCG06G014760 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G014760
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	VQ motif-containing protein 20-like
Location	CG_Chr06: 28203549 .. 28204262 (-)
RNA-Seq Expression	ClCG06G014760
Synteny	ClCG06G014760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCCTCAACAACAGCAGCTCCATGGAAAGAGGGACAATCAGAATCAGAGCATCAATAATGGCAATAAACCATTGTGTCCACCTCCATTGAAGATCAATAAGGATTCTCATTTGATTCGAAAATCTTCCTCTTCTTCTAATACTTCTTCTCCTTCCTCTTCTTCATCTTCCACCAACTCTCTCGTCAATGGCGTTGCTGCCGCCGCTGCTGCAGCTTCCATTAAGCCGCCTCAACGCCATCCGGTGATTATATACACGCATTCTCCCAAAATCATTCATACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATGACGAAGCTTCTACGAAGGCGACGAAATCTGTTGATGAGAATAATAAAGGATCTAAAGCCATTGTGAATGATGATAATGAATCGTCCTCTGTTGTGACGACGGATGAAAATTGCTGCGGCGGTGGTGTGGTGGAAGCTGGTCAGGTTAATTCGTGTTTTGCTCCTCCGATTTTTGAGCCACCGCCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATTCCGGCTTATAGGCCGAATTCGACGGAGTTTTTATGCTCTAATCAACCATTTTTTAACTACGATGATTCTTTGCTTTTTGGTGCTCCCAATATCCATTCTCTTTCACCCAATGGAATTAATGATTTCTGCGAATATAGTGAATTTTAG

mRNA sequence

ATGAGCCCTCAACAACAGCAGCTCCATGGAAAGAGGGACAATCAGAATCAGAGCATCAATAATGGCAATAAACCATTGTGTCCACCTCCATTGAAGATCAATAAGGATTCTCATTTGATTCGAAAATCTTCCTCTTCTTCTAATACTTCTTCTCCTTCCTCTTCTTCATCTTCCACCAACTCTCTCGTCAATGGCGTTGCTGCCGCCGCTGCTGCAGCTTCCATTAAGCCGCCTCAACGCCATCCGGTGATTATATACACGCATTCTCCCAAAATCATTCATACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATGACGAAGCTTCTACGAAGGCGACGAAATCTGTTGATGAGAATAATAAAGGATCTAAAGCCATTGTGAATGATGATAATGAATCGTCCTCTGTTGTGACGACGGATGAAAATTGCTGCGGCGGTGGTGTGGTGGAAGCTGGTCAGGTTAATTCGTGTTTTGCTCCTCCGATTTTTGAGCCACCGCCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATTCCGGCTTATAGGCCGAATTCGACGGAGTTTTTATGCTCTAATCAACCATTTTTTAACTACGATGATTCTTTGCTTTTTGGTGCTCCCAATATCCATTCTCTTTCACCCAATGGAATTAATGATTTCTGCGAATATAGTGAATTTTAG

Coding sequence (CDS)

ATGAGCCCTCAACAACAGCAGCTCCATGGAAAGAGGGACAATCAGAATCAGAGCATCAATAATGGCAATAAACCATTGTGTCCACCTCCATTGAAGATCAATAAGGATTCTCATTTGATTCGAAAATCTTCCTCTTCTTCTAATACTTCTTCTCCTTCCTCTTCTTCATCTTCCACCAACTCTCTCGTCAATGGCGTTGCTGCCGCCGCTGCTGCAGCTTCCATTAAGCCGCCTCAACGCCATCCGGTGATTATATACACGCATTCTCCCAAAATCATTCATACGCATCCTCGAGATTTCATGGCGTTGGTTCAAAAGCTAACCGGAATGTCTCGATCAGATGACGAAGCTTCTACGAAGGCGACGAAATCTGTTGATGAGAATAATAAAGGATCTAAAGCCATTGTGAATGATGATAATGAATCGTCCTCTGTTGTGACGACGGATGAAAATTGCTGCGGCGGTGGTGTGGTGGAAGCTGGTCAGGTTAATTCGTGTTTTGCTCCTCCGATTTTTGAGCCACCGCCACCTCCGCCACAACTGGCGAATTCTTACCTAACGAATATTCCGGCTTATAGGCCGAATTCGACGGAGTTTTTATGCTCTAATCAACCATTTTTTAACTACGATGATTCTTTGCTTTTTGGTGCTCCCAATATCCATTCTCTTTCACCCAATGGAATTAATGATTTCTGCGAATATAGTGAATTTTAG

Protein sequence

MSPQQQQLHGKRDNQNQSINNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTNSLVNGVAAAAAAASIKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATKSVDENNKGSKAIVNDDNESSSVVTTDENCCGGGVVEAGQVNSCFAPPIFEPPPPPPQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSPNGINDFCEYSEF

Homology

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BLAST of ClCG06G014760 vs. NCBI nr
Match: XP_038876677.1 (VQ motif-containing protein 20 [Benincasa hispida])

HSP 1 Score: 384.8 bits (987), Expect = 5.4e-103
Identity = 217/249 (87.15%), Postives = 219/249 (87.95%), Query Frame = 0


Query: 1   MSPQ-QQQLHGKRDNQNQSIN----NGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSS 60
           MSPQ QQQLHGKRDNQNQSIN    NGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSS
Sbjct: 1   MSPQPQQQLHGKRDNQNQSINNGNGNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSS 60

Query: 61  SSSTNSLVNGVAAAAAAASIKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD 120
           SSST SLVNGV         KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD
Sbjct: 61  SSSTTSLVNGV---------KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD 120

Query: 121 EASTKA-TKSVDENNKGS-KAIVNDDNESSSVVTTDENCCGG--GVVEAGQVNSCFAPPI 180
           EASTKA TKSVDENNKGS KA+VNDDNESSSVVTTDENCCGG  GVVE GQVNSCF   I
Sbjct: 121 EASTKATTKSVDENNKGSKKAVVNDDNESSSVVTTDENCCGGGSGVVEGGQVNSCFGAAI 180

Query: 181 FE--PPPPPPQLANSYLTNIPAYRPNSTEFLCSNQP-FFNYDDSLLFGAPNIHSLSPNGI 238
           FE  PPPPPPQLANSYLTNIP YRPNSTEFLC+NQP FFNYDDSLLFGA NI SLS NGI
Sbjct: 181 FEPPPPPPPPQLANSYLTNIPVYRPNSTEFLCTNQPSFFNYDDSLLFGAHNIPSLSSNGI 240

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BLAST of ClCG06G014760 vs. NCBI nr
Match: KAG7021613.1 (VQ motif-containing protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360.9 bits (925), Expect = 8.3e-96
Identity = 198/244 (81.15%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MSPQQQQLHGKRDNQNQSINNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTN 60
           MSP QQ L+GKRD    + NN  K LCPPPLKINKDSH IRKSSSS++TS  SSSSS+++
Sbjct: 1   MSP-QQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSSTSS 60

Query: 61  SLVNGVAAA-AAAASIK-PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
            LVNG+AAA A A S+K PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD+EAS
Sbjct: 61  QLVNGIAAAVAVAGSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEAS 120

Query: 121 TKATKSVDENNKGSKAIVNDDNESSSVVTTDENCCGGGVVEAGQVNSCFAPPIFEPPPPP 180
            KATKS DENNKGSKA+V+DDNESSSVV TDENCC GGVVE GQVNSCFAPPIFEPPPPP
Sbjct: 121 PKATKSGDENNKGSKAVVSDDNESSSVV-TDENCCSGGVVE-GQVNSCFAPPIFEPPPPP 180

Query: 181 PQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSP-----NGINDFCE 238
           PQLANSYLTNIP YRPNSTEFLCSNQPFFNYDDSLLFGAPNI SL+      NGINDFCE
Sbjct: 181 PQLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCE 240

[Close]

BLAST of ClCG06G014760 vs. NCBI nr
Match: KAG6587652.1 (VQ motif-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 359.8 bits (922), Expect = 1.8e-95
Identity = 197/244 (80.74%), Postives = 213/244 (87.30%), Query Frame = 0


Query: 1   MSPQQQQLHGKRDNQNQSINNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTN 60
           MSP QQ L+GKRD    + NN  K LCPPPLKINKDSH IRKSSSS++TS  SSSSS+++
Sbjct: 1   MSP-QQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSSTSS 60

Query: 61  SLVNGVAAA-AAAASIK-PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
            LVNG+AAA A A+S+K PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD+EAS
Sbjct: 61  QLVNGIAAAVAVASSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEAS 120

Query: 121 TKATKSVDENNKGSKAIVNDDNESSSVVTTDENCCGGGVVEAGQVNSCFAPPIFEPPPPP 180
            KATKS DENNKGSKA+V+DDNESSSVV T+ENCC GGVVE GQVNSCFAPPIFEPPPPP
Sbjct: 121 PKATKSGDENNKGSKAVVSDDNESSSVV-TEENCCSGGVVE-GQVNSCFAPPIFEPPPPP 180

Query: 181 PQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSP-----NGINDFCE 238
           PQLANSYLTNIP YRPNSTEFLCSNQPFFNYDDSLLFGAPNI SL+      NGINDFCE
Sbjct: 181 PQLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCE 240

[Close]

BLAST of ClCG06G014760 vs. NCBI nr
Match: XP_022933476.1 (VQ motif-containing protein 20-like [Cucurbita moschata])

HSP 1 Score: 359.8 bits (922), Expect = 1.8e-95
Identity = 198/244 (81.15%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MSPQQQQLHGKRDNQNQSINNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTN 60
           MSP QQ L+GKRD    + NN  K LCPPPLKINKDSH IRKSSSS++TS  SSSSS+++
Sbjct: 1   MSP-QQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSSTSS 60

Query: 61  SLVNGVAAA-AAAASIK-PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
            LVNGVAAA A A S+K PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD+EAS
Sbjct: 61  QLVNGVAAAVAVAGSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEAS 120

Query: 121 TKATKSVDENNKGSKAIVNDDNESSSVVTTDENCCGGGVVEAGQVNSCFAPPIFEPPPPP 180
            KATKS DENNKGSKA+V+DDNESSSVV T+ENCC GGVVE GQVNSCFAPPIFEPPPPP
Sbjct: 121 PKATKSGDENNKGSKAVVSDDNESSSVV-TEENCCSGGVVE-GQVNSCFAPPIFEPPPPP 180

Query: 181 PQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSP-----NGINDFCE 238
           PQLANSYLTNIP YRPNSTEFLCSNQPFFNYDDSLLFGAPNI SL+      NGINDFCE
Sbjct: 181 PQLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCE 240

[Close]

BLAST of ClCG06G014760 vs. NCBI nr
Match: XP_023531062.1 (VQ motif-containing protein 20 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94
Identity = 197/244 (80.74%), Postives = 211/244 (86.48%), Query Frame = 0


Query: 1   MSPQQQQLHGKRDNQNQSINNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTN 60
           MSP QQ L+GKRD    + NN  K LCPPPLKINKDSH IRKSSSS++TS  SSSSS+++
Sbjct: 1   MSP-QQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSSTSS 60

Query: 61  SLVNGVAAA-AAAASIK-PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
            LVNGVAAA A A S+K PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD+EAS
Sbjct: 61  QLVNGVAAAVAVAGSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEAS 120

Query: 121 TKATKSVDENNKGSKAIVNDDNESSSVVTTDENCCGGGVVEAGQVNSCFAPPIFEPPPPP 180
            KATKS DENNKGSKA+V+DDNESSSVV T+ENCC GGVVE GQVNSCFAPPIFEPPPPP
Sbjct: 121 PKATKSGDENNKGSKAVVSDDNESSSVV-TEENCCSGGVVE-GQVNSCFAPPIFEPPPPP 180

Query: 181 PQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSP-----NGINDFCE 238
           PQLANSYLTNIP YRPNSTEFLCSNQPFFNYDDSLLFGAPNI SL+      NG NDFCE
Sbjct: 181 PQLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGNNDFCE 240

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BLAST of ClCG06G014760 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 109/301 (36.21%), Postives = 145/301 (48.17%), Query Frame = 0


Query: 3   PQQQQLHGKRD-NQNQS--INNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSST 62
           P     H KR+ N+N S  +   +    PP LK+NKDSH+I+K        SPSS SS+ 
Sbjct: 15  PHHHHHHPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK------PPSPSSFSSAA 74

Query: 63  NSLVNGVAAAAAAASIKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS- 122
                           KP  RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD++   
Sbjct: 75  ----------------KP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGG 134

Query: 123 ---------------TKATKSVDE---------------------NNKG---SKAIVNDD 182
                          T +  +VD                      N KG   +  ++++D
Sbjct: 135 GNAMTDPGVVKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISED 194

Query: 183 NESSSVVTTDENCCGGGVVEAGQVNSCF----------APPIFEPPPPPPQLANSYLTNI 238
           +ESSSV+TT+EN     + E GQVNS             PP   PPPPPP + ++   N 
Sbjct: 195 SESSSVITTEEN-----IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINY 254

[Close]

BLAST of ClCG06G014760 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04
Identity = 42/123 (34.15%), Postives = 58/123 (47.15%), Query Frame = 0


Query: 21  NGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTNSLVNGVAAAAAAASIKPPQR 80
           NG++   P  LK+  +SH I+K+SS  +   P   +S                       
Sbjct: 10  NGSR---PSSLKLAGESHTIKKTSSCKSKPRPHGRAS----------------------- 69

Query: 81  HPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATKSVDENNKGSKAIVNDDN 140
            PVIIY HSPK+IHT   DFMALVQ+LTG+    DE   + T     +    +  V DDN
Sbjct: 70  -PVIIYAHSPKVIHTRAEDFMALVQRLTGL----DEIIRRNTSESSSSVVTEEVNVGDDN 101

Query: 141 ESS 144
            ++
Sbjct: 130 TAA 101

[Close]

BLAST of ClCG06G014760 vs. ExPASy TrEMBL
Match: A0A6J1EZ55 (VQ motif-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111440881 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 9.0e-96
Identity = 198/244 (81.15%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 1   MSPQQQQLHGKRDNQNQSINNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTN 60
           MSP QQ L+GKRD    + NN  K LCPPPLKINKDSH IRKSSSS++TS  SSSSS+++
Sbjct: 1   MSP-QQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSSTSS 60

Query: 61  SLVNGVAAA-AAAASIK-PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
            LVNGVAAA A A S+K PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD+EAS
Sbjct: 61  QLVNGVAAAVAVAGSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEAS 120

Query: 121 TKATKSVDENNKGSKAIVNDDNESSSVVTTDENCCGGGVVEAGQVNSCFAPPIFEPPPPP 180
            KATKS DENNKGSKA+V+DDNESSSVV T+ENCC GGVVE GQVNSCFAPPIFEPPPPP
Sbjct: 121 PKATKSGDENNKGSKAVVSDDNESSSVV-TEENCCSGGVVE-GQVNSCFAPPIFEPPPPP 180

Query: 181 PQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSP-----NGINDFCE 238
           PQLANSYLTNIP YRPNSTEFLCSNQPFFNYDDSLLFGAPNI SL+      NGINDFCE
Sbjct: 181 PQLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCE 240

[Close]

BLAST of ClCG06G014760 vs. ExPASy TrEMBL
Match: A0A6J1L266 (VQ motif-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111499724 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.9e-95
Identity = 199/245 (81.22%), Postives = 211/245 (86.12%), Query Frame = 0


Query: 1   MSPQQQQLHGKRDNQNQSINNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTN 60
           MSP QQ L+GKRD    + NN  K LCPPPLKINKDSH IRK SSSSN++SPSSSSSST+
Sbjct: 1   MSP-QQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHFIRK-SSSSNSASPSSSSSSTS 60

Query: 61  S-LVNGVAAAAAAA--SIKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEA 120
           S LVNGVAAA A A  +  PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD+EA
Sbjct: 61  SQLVNGVAAAVAVAGSAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEA 120

Query: 121 STKATKSVDENNKGSKAIVNDDNESSSVVTTDENCCGGGVVEAGQVNSCFAPPIFEPPPP 180
           S KATKS DENNKGSK +V+DDNESSSVV T+ENCC GGVVE GQVNSCFAPPIFEPPPP
Sbjct: 121 SPKATKSGDENNKGSKVVVSDDNESSSVV-TEENCCSGGVVE-GQVNSCFAPPIFEPPPP 180

Query: 181 PPQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSP-----NGINDFC 238
           PPQLANSYLTNIP YRPNSTEFLCSNQPFFNYDDSLLFGAPNI SL+      NGINDFC
Sbjct: 181 PPQLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFC 240

[Close]

BLAST of ClCG06G014760 vs. ExPASy TrEMBL
Match: A0A5A7V0G0 (VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001740 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.5e-90
Identity = 196/245 (80.00%), Postives = 202/245 (82.45%), Query Frame = 0


Query: 1   MSP--QQQQLHGKRDNQNQSINNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSS 60
           MSP  QQQQ+HGKRDNQ    NN NKPL PP LKINKDSHLIRKSSSSSNTSSPSSSSSS
Sbjct: 1   MSPQHQQQQIHGKRDNQIN--NNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSS 60

Query: 61  TNSLVNGVAAAAAAASIKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
           T SLVNGV  A A    KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS
Sbjct: 61  TTSLVNGVPTAVA----KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120

Query: 121 TKAT-KSVDENNKGSKAIVNDDNESSSVVTTDENCCGG----GVVEAGQVNSCFAPPIFE 180
           TKAT KSVDENNK SK +VNDDNESSSV+TTDENCC G    G VE GQVNSCF P  FE
Sbjct: 121 TKATAKSVDENNKVSK-VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFE 180

Query: 181 ----PPPPPPQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSPNGIN 235
               PPPPPPQLANSYLTN+P Y PNSTEFLC NQP FNYDDSLLFG  NI SLS NGI+
Sbjct: 181 PPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGIS 238

[Close]

BLAST of ClCG06G014760 vs. ExPASy TrEMBL
Match: A0A1S3BCI6 (VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.9e-90
Identity = 196/245 (80.00%), Postives = 202/245 (82.45%), Query Frame = 0


Query: 1   MSP--QQQQLHGKRDNQNQSINNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSS 60
           MSP  QQQQ+HGKRDNQ    NN NKPL PP LKINKDSHLIRKSSSSSNTSSPSSSSSS
Sbjct: 1   MSPQHQQQQIHGKRDNQIN--NNANKPLSPPSLKINKDSHLIRKSSSSSNTSSPSSSSSS 60

Query: 61  TNSLVNGVAAAAAAASIKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
           T SLVNGV  A A    KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS
Sbjct: 61  TTSLVNGVPTAVA----KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120

Query: 121 TKAT-KSVDENNKGSKAIVNDDNESSSVVTTDENCCGG----GVVEAGQVNSCFAPPIFE 180
           TKAT KSVDENNK SK +VNDDNESSSV+TTDENCC G    G VE GQVNSCF P  FE
Sbjct: 121 TKATAKSVDENNKISK-VVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFE 180

Query: 181 ----PPPPPPQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSPNGIN 235
               PPPPPPQLANSYLTN+P Y PNSTEFLC NQP FNYDDSLLFG  NI SLS NGI+
Sbjct: 181 PPPPPPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGIS 238

[Close]

BLAST of ClCG06G014760 vs. ExPASy TrEMBL
Match: A0A0A0LKA6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 196/244 (80.33%), Postives = 205/244 (84.02%), Query Frame = 0


Query: 1   MSP-QQQQLHGKRDNQNQSINNGNKPLCPPP-LKINKDSHLIRKSSSSSNTSSPSSSSSS 60
           MSP QQQQ+HGKRDNQ    NN NKPL PPP LKINKDSHLIRKSSSSSNTSSPSSSSSS
Sbjct: 1   MSPQQQQQIHGKRDNQTN--NNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSS 60

Query: 61  TNSLVNGVAAAAAAASIKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120
           T SL+NGV   AAA   KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS
Sbjct: 61  TTSLLNGVIPTAAA---KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS 120

Query: 121 TKATKS--VDENNKGSKAIVNDDNESSSVVTTDENCCGG----GVVEAGQVNSCFAPPIF 180
           TKAT    VDENNK SK +VNDDNESSSVVTTDENCCGG    G VE GQVNSCF P IF
Sbjct: 121 TKATAKSVVDENNKASK-VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIF 180

Query: 181 E--PPPPPPQLANSYLTNIPAYRPNSTEFLCSNQPFFNYDDSLLFGAPNIHSLSPNGIND 235
           E  PPPPPPQLA+SYL+NIP Y PNSTEFLC NQP FNYDDSLLFG+ NI SLS NG++D
Sbjct: 181 EPPPPPPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGS-NIPSLSSNGVSD 237

[Close]

BLAST of ClCG06G014760 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 109/301 (36.21%), Postives = 145/301 (48.17%), Query Frame = 0


Query: 3   PQQQQLHGKRD-NQNQS--INNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSST 62
           P     H KR+ N+N S  +   +    PP LK+NKDSH+I+K        SPSS SS+ 
Sbjct: 15  PHHHHHHPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK------PPSPSSFSSAA 74

Query: 63  NSLVNGVAAAAAAASIKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEAS- 122
                           KP  RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD++   
Sbjct: 75  ----------------KP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGG 134

Query: 123 ---------------TKATKSVDE---------------------NNKG---SKAIVNDD 182
                          T +  +VD                      N KG   +  ++++D
Sbjct: 135 GNAMTDPGVVKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISED 194

Query: 183 NESSSVVTTDENCCGGGVVEAGQVNSCF----------APPIFEPPPPPPQLANSYLTNI 238
           +ESSSV+TT+EN     + E GQVNS             PP   PPPPPP + ++   N 
Sbjct: 195 SESSSVITTEEN-----IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINY 254

[Close]

BLAST of ClCG06G014760 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05
Identity = 42/123 (34.15%), Postives = 58/123 (47.15%), Query Frame = 0


Query: 21  NGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTNSLVNGVAAAAAAASIKPPQR 80
           NG++   P  LK+  +SH I+K+SS  +   P   +S                       
Sbjct: 10  NGSR---PSSLKLAGESHTIKKTSSCKSKPRPHGRAS----------------------- 69

Query: 81  HPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATKSVDENNKGSKAIVNDDN 140
            PVIIY HSPK+IHT   DFMALVQ+LTG+    DE   + T     +    +  V DDN
Sbjct: 70  -PVIIYAHSPKVIHTRAEDFMALVQRLTGL----DEIIRRNTSESSSSVVTEEVNVGDDN 101

Query: 141 ESS 144
            ++
Sbjct: 130 TAA 101

[Close]

BLAST of ClCG06G014760 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.1e-04
Identity = 36/97 (37.11%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 28  PPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTNSLVNGVAAAAAAASIKPPQRHPVIIYT 87
           P PLK+  DSH I K    +    P      T+             S   P   PVIIYT
Sbjct: 16  PIPLKVRGDSHKIIKKPPLA-PPHPQPQPPQTHQ---------QEPSQSRPPPGPVIIYT 75

Query: 88  HSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATKS 125
            SP+IIHTHP +FM LVQ+LTG + +   +S+ ++ +
Sbjct: 76  VSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSST 102

[Close]

BLAST of ClCG06G014760 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 42.7 bits (99), Expect = 4.7e-04
Identity = 36/105 (34.29%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 20  NNGNKPLCPPPLKINKDSHLIRKSSSSSNTSSPSSSSSSTNSLVNGVAAAAAAASIKPPQ 79
           + GN    P PLK+  DSH I K    +    P      T+             S   P 
Sbjct: 8   SRGNMGPKPTPLKVRGDSHKIIKKPPLA-PPHPQPQPPQTHQ---------QEPSQSRPP 67

Query: 80  RHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATKS 125
             PV IYT +P+IIHTHP +FM LVQ+LTG + +   +S+ ++ +
Sbjct: 68  PGPVNIYTVTPRIIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSST 102

The following BLAST results are available for this feature:

BLAST of ClCG06G014760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876677.1	5.4e-103	87.15	VQ motif-containing protein 20 [Benincasa hispida]	[more]
KAG7021613.1	8.3e-96	81.15	VQ motif-containing protein 20, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6587652.1	1.8e-95	80.74	VQ motif-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022933476.1	1.8e-95	81.15	VQ motif-containing protein 20-like [Cucurbita moschata]	[more]
XP_023531062.1	1.2e-94	80.74	VQ motif-containing protein 20 [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG06G014760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS54	2.2e-27	36.21	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q9CA36	1.6e-04	34.15	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of ClCG06G014760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZ55	9.0e-96	81.15	VQ motif-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC11144088...	[more]
A0A6J1L266	9.9e-95	81.22	VQ motif-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111499724 ...	[more]
A0A5A7V0G0	1.5e-90	80.00	VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BCI6	1.9e-90	80.00	VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4...	[more]
A0A0A0LKA6	1.3e-89	80.33	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=...	[more]

BLAST of ClCG06G014760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18360.1	1.6e-28	36.21	VQ motif-containing protein	[more]
AT1G68450.1	1.1e-05	34.15	VQ motif-containing protein	[more]
AT1G21326.1	2.1e-04	37.11	VQ motif-containing protein	[more]
AT1G21320.1	4.7e-04	34.29	nucleotide binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 87..111 e-value: 1.7E-11 score: 43.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..60
IPR039832	VQ motif-containing protein 20	PANTHER	PTHR33143:SF4	VQ MOTIF-CONTAINING PROTEIN 20	coord: 1..234
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 1..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G014760.1	ClCG06G014760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding