ClCG06G012055 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTGGATCATGTGTGTTTGATGGAAGCATTTCGATACAACACTTTCTGATTGAACGAAGGCCTTACCATCGAAACTGTGGCTGTGCATTACACGACCATCGAAGAATAAAAAACGGAGCTGCTTGTTTGCATTCTCTCAAACTCAAAACCTCTGTTTCCTTTCTCAAAACCCAAAAATGGACAAAACCTTCTCTCCACTTACTTCATTCCTCTTCCAAACTCTCCTCTCAACAACTTAACTCTGAACCTCCTCCTTTTCTTTCCCAATTTTCAACTTCTTCATAG ATGGGGATTGGATCATGTGTGTTTGATGGAAGCATTTCGATACAACACTTTCTGATTGAACGAAGGCCTTACCATCGAAACTGTGGCTGTGCATTACACGACCATCGAAGAATAAAAAACGGAGCTGCTTGTTTGCATTCTCTCAAACTCAAAACCTCTGTTTCCTTTCTCAAAACCCAAAAATGGACAAAACCTTCTCTCCACTTACTTCATTCCTCTTCCAAACTCTCCTCTCAACAACTTAACTCTGAACCTCCTCCTTTTCTTTCCCAATTTTCAACTTCTTCATAG ATGGGGATTGGATCATGTGTGTTTGATGGAAGCATTTCGATACAACACTTTCTGATTGAACGAAGGCCTTACCATCGAAACTGTGGCTGTGCATTACACGACCATCGAAGAATAAAAAACGGAGCTGCTTGTTTGCATTCTCTCAAACTCAAAACCTCTGTTTCCTTTCTCAAAACCCAAAAATGGACAAAACCTTCTCTCCACTTACTTCATTCCTCTTCCAAACTCTCCTCTCAACAACTTAACTCTGAACCTCCTCCTTTTCTTTCCCAATTTTCAACTTCTTCATAG MGIGSCVFDGSISIQHFLIERRPYHRNCGCALHDHRRIKNGAACLHSLKLKTSVSFLKTQKWTKPSLHLLHSSSKLSSQQLNSEPPPFLSQFSTSS Homology
BLAST of ClCG06G012055 vs. NCBI nr
Match: KAA0050036.1 (hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK03640.1 hypothetical protein E5676_scaffold1369G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 132.1 bits (331), Expect = 2.5e-27 Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 0
BLAST of ClCG06G012055 vs. NCBI nr
Match: KGN65216.1 (hypothetical protein Csa_019753 [Cucumis sativus]) HSP 1 Score: 121.3 bits (303), Expect = 4.5e-24 Identity = 68/99 (68.69%), Postives = 77/99 (77.78%), Query Frame = 0
BLAST of ClCG06G012055 vs. NCBI nr
Match: XP_023531633.1 (uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 84.0 bits (206), Expect = 7.9e-13 Identity = 45/76 (59.21%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of ClCG06G012055 vs. NCBI nr
Match: KAG6587851.1 (hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 84.0 bits (206), Expect = 7.9e-13 Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of ClCG06G012055 vs. NCBI nr
Match: XP_023531631.1 (uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 82.0 bits (201), Expect = 3.0e-12 Identity = 48/94 (51.06%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of ClCG06G012055 vs. ExPASy TrEMBL
Match: A0A5A7U781 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00690 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27 Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 0
BLAST of ClCG06G012055 vs. ExPASy TrEMBL
Match: A0A0A0LZ02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.2e-24 Identity = 68/99 (68.69%), Postives = 77/99 (77.78%), Query Frame = 0
BLAST of ClCG06G012055 vs. ExPASy TrEMBL
Match: A0A2P6RIE3 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086591 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.6e-09 Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of ClCG06G012055 vs. ExPASy TrEMBL
Match: A0A2P6RIF2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086581 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.4e-09 Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of ClCG06G012055 vs. ExPASy TrEMBL
Match: A0A1R3G2J8 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29281 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 5.7e-09 Identity = 39/74 (52.70%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of ClCG06G012055 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07 Identity = 33/83 (39.76%), Postives = 43/83 (51.81%), Query Frame = 0
BLAST of ClCG06G012055 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 5.9e-06 Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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