ClCG06G011880 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGCCGTCCTCCCGCCCCCAGCTGAAAAAACCTAACCCTTCCACTTTGCTTCCCTCCTTTTCACCTTGTACGTTCGTTTGAGGACGCAGGGATGACGAAATTGATGTGGTTGATCCTTTTAGCTGGTAATCTTTGCCACTTTGCGTTAGCTGATCAGATCTTCCCAGCTCAATTAGGTGACATTCTTCTCCCTCATTTTCTTTTTCTTGAAATTTTTCCATGAAAACTTGCGAAATAGATGTGATTGATGAATTTGTATTGTTGGTAGTTCCTCCGATAATTTATTTACTCGCATATTGGAATTAGCGAACTCCTGAGGGTGATAGTTCATAGGTTGTTTAGCACGACTTGAAACTTGAAACATTTATTACTTTTGCTTATTATGACAGTAACTTGTTAGTATGAAGTTTTATTTTCTCTTCTTTCTGATTGTTGATTAGCAGGTGGTACATTTAGTCGCAACTCACGTGGGCCAAAATACAATATTGAATTCCATCCACAAGACTCTCCTTACAGTCCTGTAAGCTTTTTAATATACTTAGTTGTTGATTCTTGATATTGATAGGACCCTGTTGGTTTATATAATGAAATTAGATGGGGAGCTTTTGGGTCTTAGGTATCCCTCCCTCTTTCTTGTTAACTCGGAGTGTTGTGTAACTTTGTTCAAGATATCTTCAATTAAGCAACCCAGCATATAGTAATGTACAGCTTTACGAAGTCAAAGATTATAGATTCCAGTATCTTCATATACTAGACGCTTGCTAATCAGTACCTAATCCTCAAAATTGTAACCTTCCAATGGTATATAAGCTACTAATACGTTTTTTCCCAAAGCAAGTTCGTCATCAACAATAGGAGCATTGTCTGCTAAATTTTGCCATTTTTTAATATATTTACCCTGGTTCACTTGGGATTTTTGCTGCATACAAGTTCCTTTTTTTGTTTATTTTATTTTATTTTATTTTATTTTTTTCTATGTTAGAGTTTATACATAACTAAGGGAATTCTTCGAGTATACCCATTGCCTGAAAAAAACGATCTTGTCAATATCGGTATAAATGATTTTTTCCCTGTGTTTGGCTATAATGGAAACCCCTATATCCCAAGCCACTTGGTGTGCCAACCCAGTCGACAATGCACTTTTCGGACCAAAAAAACGAGACTGCTTGATGTTGCATATTAGAACTCATTAAAGCATGATTCACATCGTAATGTTCGATAAAGGGAATGAGGGAAGCTCCAATAGAAAAATATTGGAAGGGAAAAAGACTTTGAAGATGAACTTGTTCCCATTCAATAGTCAAGAATTATTAATGGTATCGAGCTGGGACAATATGTTCTTCATTTCTCCGCACTTTCATTATTCAATCTCTAGTTATCTTATTTTGTTGTTTCTTTGTTTGAATTTATCATCGCATGTTTTCTCTGTTGGCCTAATCTTTTAGTTTTATACAATATCTTGTTTCCCACTCTGTGAAATATATTCGTTAGTTGCCTTCTTTATCTGAGACAGAGGATTTGAGGAAGGGCTTTTGGAGATTGACAGTTGATTGTTTTGTTTGGCATGACTAAATACTTTAAATAAATAAGGAGAAATTTTCTGTGTTACATTGATCCATGGCACCAAAATTTGAACCAAATTAAAATTGTAGTTTCATCCTTTTGGTATTAAGCAATAGGAATATTTGGTATGCAAATGATTTCTTGAACTCGGAGACCCTCTTAGATGGCCTCTACATGAGTCTGGTCGTTAAGATGCACTATGGAAGAGGAGTTGGGAAGATGGCCTCTGTGTGCACTATATCACTTAGATGCTTGATAATAAAGTCATTGATGTGCTGAATTCTACTGCAATTGTAAGTGCAAATTAAAAACACCCTCACGGTGCATTAAATTTTATTGGTAATGTTCTCCATCAACTTGAAGAGTTGAGATATTGAGCCTGTAATCTGTACCTGTACCCAGATGTGAGGGAAAGTCACATTTCCATTTACAATCCCATTTGCCTTACAAGTTACTGTGTTCTTTCCTTATGATAGACTTCCTACAGAATCTTCTTTCCCTAAGCTGTATGATATCTGTCTTCAGAATTCAAGAATATGTAGGTATGTCGTATACCACTTGAACTTACTATGTTTTTGTGATTTTGCAGGACGAAGACCAGGAATCTGTGTTTATGCCCAATAAAAATGGAAAGAATTACTTATGTTACTTGCCTAAGGTGGAGAAGTCCAAGAGCGGAAAGCCAACTGTTCAACTGAACATGAGTAGCATGATTGTGGAATCTGAGAAGCGAGTCAAATTGAAGACTCCAGATGAGCTGCTTGAGGCATTAAAAGAGCAATGCTTTGTCCGGGTTAGGATCTGTCGCTGAATATTGTTTTGCATGCGTATAATGACTATTATCTACATTTTAGAATCATATCTCAAAAGAAAAGTAAAGCTGTAAGCTGTGTTTTTGAATGTGTGCCTTTAGAAATCGGCATCCCAATGAAAAGTTGAGGCCCATTTGATAACCTTTTTATTTTTAATTTGTGGTTTTTGAAAATTAAACTTCTAAAAACTACTTCCACCAATTACTATTGGTAGTTTTAAAAACTAGAAAAAGTAGTTTTTAAAAATATTGTTATTTGTTTTTTGAATTTGGCTAAGAATCCAAATTCTTCCGTAAGAAAGATGACAACAATCCTATAGAAATTGTGGGCAAGCAAGCTTAATTTTCTCCATGGTGCTCACCTATAGGATTTAATATCCTTTGGATTTCCTTGACACTCAAATGTTGTAGGATCAGACAGGTTGTCTTGTGAGATTAGTTGAGGTGCGCATAAGTTGGCCCAGACACTCACGGATATAAAAAAGAGAAAAAAAAAAAACTTAATTTTCAAAAACCAAAAAACTGATGGTTATCAAATGAGGCTTAAAGAAAGGTTAATTTTATTTCAAACAATGCCTAAAGAAATTAAGACATTTTCTTCCTTATGTTTAAATAATACACATGTATTAAAAGTAAACAATGTATTTATAAAATGCAAGTGAAGTGTGTGCTTTGGGGTTGCCTTGCCTCTCGTGAGACAAAGTGCCTTTCTTGCGCTCAACACTAATAAAGCTATTAAATACTAAGGTCGTTTGTGGTAAAATATATGCATTTTTAAGTAAAACATGTGATGATTATGTCCTGAACAATTGACATGTTGACCTTGCATCATCAACTCCTTTTTGCAGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACACTAAGACAATTTCATTTGGAGGATGAGAAGGTAGTCTCCTATAGTGCCTTATAATGCATTCTATATGTGATTCTCTAATCTTAGCTTATGAATAAGGAAGGCAACTGTCATGGTTTGTTGCTTAATTTAAAACGTAAAATCATGCTTTGGTAAGTAGTAAAGACGTTGAAGTTTCTGTCATTTTATCTTACAGGTAGTTCAGGAGTTTGTATTGGGCGTCTATGATGCAGAGGCAACTGCTAATCTCAATGAGAATCTCTCTGATATATCTACTTTGAAGGATCCTCGCTCAAAAGATGCATCCCAAAGGTGTGCTTTTATTTTCATTAGTTACGAGTAAAGAAATGATGAACAGGCTTTACATAATAGGAAAAGCCGATCTTCAATCAATAAAGCTTGTTATTTTCGTTGTTCTATCACTTCTCAAAAGTAGTAAGTTGGATTCATACATGGAAAAGCAGAAATCTGTGTGAGTTTTCATCTGGCGTTCTAGTATTAATTTGGCTTTGTGTTTCTTCCACAGTCAATTCTTACATGTGCCAAATATAACACAATGATACTGAAGACATGAAACAGAAAGCTAGTATGAATTTAGTGTTTGAAAGGTTTGATTGATCATATAAGTAGAACAACACAATTGTATTCCCTATAGAACAGATTCTGTTCAAGTAAGGTAGTAATGGTTGACCATATAAGTGTGTTAAACAGTGCACAAGAGTAAGATTGGTGCTTGGTTGAGTTATCTCATACATAAGAATTGTGCGATAGATATAAGATCTATTATTTGATAAATAGAAAACTAATCTCAATATCTCAAATTAATTATCGATCTACATGACTCACTCAGGTATCATGCTCATCAGTACACAAATGGAACCATGTGTGATCTCACAAATCAACCGCGAGAAACTGAGGTACAAATAATTAATGATTTACCGTGTCACATTTTTTTTTATTCTCCATTACTGATATTTATTCTTAATTACATTGCAGGTTAGATTTGTTTGCTCAGAGCCCAGAGCCATGATTAATTCTATCACAGAACTATCGACATGCAAGTATGCGCTTACAGTGCGATGCCCAACGCTTTGCAAGCATCCGTAAATCTCTCACTCTCACTCTTTGCTCTTTTTACTTACACAAACACATCCATTTTGCTCATTGTTACCTGAAATATAATTACAAAAACAAGCGTTACTCGCTTAAGTTTGTGATGGGGAACCAAGAAAACAAGAACCCTGCTCTTGCAACCGAACTACTTTAAAGAACAGCCTGATAGAAGATAGGGAACTAGTATAGGAACTTAAAAGAATTGAAGTTGTCGAGTTCACATCAAGATGCCAATTTTATTGATAGATATAGTTTTCATTTCTCTTATTCGATCATTTTGTTTCGACCGTGCAGGTTATTCCAGGAAGAGAGACCAGTGTGGTACATCATTAACTGCAACGTGCTCCCCGACAATTACAAGGAAACAGAGCGGAGTGAAGAATTAGCAGATGAGATTGTCATGGTTACAGACGTCAAATATCCAAAAAATGAATCTGAAGATTAATGTGAATATTTATATCATAGAAGTTTTATCGACCAAACTGACCTTACAAAAGAAGCTCTTCCTCTGTAGATTTTTTTCTCAAATTCAAATTATACAATTGCTATGGAGATCAAGCGATCGATTTTCAAGCCCCACGACGAAAATTACTTGCATGGAATTTAGTATGCTTTGATCATATTTGAATATATAGGTCAACCTGAAAGCTACTGATATAGGAGTCATTTGATGAGATTTATTGTTTTTGACAATGATCCAACTTATTGTAGGGGAAAAGTAATGAGTTTGAATTGGTAAACTCATAGGTTGCTTTTATTGAGACATTTACATCACTACCACAATAATAAACAATTGAAAGACCATTATTTGAGCC TAGCCGTCCTCCCGCCCCCAGCTGAAAAAACCTAACCCTTCCACTTTGCTTCCCTCCTTTTCACCTTGTACGTTCGTTTGAGGACGCAGGGATGACGAAATTGATGTGGTTGATCCTTTTAGCTGGTAATCTTTGCCACTTTGCGTTAGCTGATCAGATCTTCCCAGCTCAATTAGGTGGTACATTTAGTCGCAACTCACGTGGGCCAAAATACAATATTGAATTCCATCCACAAGACTCTCCTTACAGTCCTGACGAAGACCAGGAATCTGTGTTTATGCCCAATAAAAATGGAAAGAATTACTTATGTTACTTGCCTAAGGTGGAGAAGTCCAAGAGCGGAAAGCCAACTGTTCAACTGAACATGAGTAGCATGATTGTGGAATCTGAGAAGCGAGTCAAATTGAAGACTCCAGATGAGCTGCTTGAGGCATTAAAAGAGCAATGCTTTGTCCGGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACACTAAGACAATTTCATTTGGAGGATGAGAAGGTAGTAGTTCAGGAGTTTGTATTGGGCGTCTATGATGCAGAGGCAACTGCTAATCTCAATGAGAATCTCTCTGATATATCTACTTTGAAGGATCCTCGCTCAAAAGATGCATCCCAAAGGTGTGCTTTTATTTTCATTAGTTACGAGTATCATGCTCATCAGTACACAAATGGAACCATGTGTGATCTCACAAATCAACCGCGAGAAACTGAGGTTAGATTTGTTTGCTCAGAGCCCAGAGCCATGATTAATTCTATCACAGAACTATCGACATGCAAGTATGCGCTTACAGTGCGATGCCCAACGCTTTGCAAGCATCCGTTATTCCAGGAAGAGAGACCAGTGTGGTACATCATTAACTGCAACGTGCTCCCCGACAATTACAAGGAAACAGAGCGGAGTGAAGAATTAGCAGATGAGATTGTCATGGTTACAGACGTCAAATATCCAAAAAATGAATCTGAAGATTAATGTGAATATTTATATCATAGAAGTTTTATCGACCAAACTGACCTTACAAAAGAAGCTCTTCCTCTGTAGATTTTTTTCTCAAATTCAAATTATACAATTGCTATGGAGATCAAGCGATCGATTTTCAAGCCCCACGACGAAAATTACTTGCATGGAATTTAGTATGCTTTGATCATATTTGAATATATAGGTCAACCTGAAAGCTACTGATATAGGAGTCATTTGATGAGATTTATTGTTTTTGACAATGATCCAACTTATTGTAGGGGAAAAGTAATGAGTTTGAATTGGTAAACTCATAGGTTGCTTTTATTGAGACATTTACATCACTACCACAATAATAAACAATTGAAAGACCATTATTTGAGCC ATGACGAAATTGATGTGGTTGATCCTTTTAGCTGGTAATCTTTGCCACTTTGCGTTAGCTGATCAGATCTTCCCAGCTCAATTAGGTGGTACATTTAGTCGCAACTCACGTGGGCCAAAATACAATATTGAATTCCATCCACAAGACTCTCCTTACAGTCCTGACGAAGACCAGGAATCTGTGTTTATGCCCAATAAAAATGGAAAGAATTACTTATGTTACTTGCCTAAGGTGGAGAAGTCCAAGAGCGGAAAGCCAACTGTTCAACTGAACATGAGTAGCATGATTGTGGAATCTGAGAAGCGAGTCAAATTGAAGACTCCAGATGAGCTGCTTGAGGCATTAAAAGAGCAATGCTTTGTCCGGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACACTAAGACAATTTCATTTGGAGGATGAGAAGGTAGTAGTTCAGGAGTTTGTATTGGGCGTCTATGATGCAGAGGCAACTGCTAATCTCAATGAGAATCTCTCTGATATATCTACTTTGAAGGATCCTCGCTCAAAAGATGCATCCCAAAGGTGTGCTTTTATTTTCATTAGTTACGAGTATCATGCTCATCAGTACACAAATGGAACCATGTGTGATCTCACAAATCAACCGCGAGAAACTGAGGTTAGATTTGTTTGCTCAGAGCCCAGAGCCATGATTAATTCTATCACAGAACTATCGACATGCAAGTATGCGCTTACAGTGCGATGCCCAACGCTTTGCAAGCATCCGTTATTCCAGGAAGAGAGACCAGTGTGGTACATCATTAACTGCAACGTGCTCCCCGACAATTACAAGGAAACAGAGCGGAGTGAAGAATTAGCAGATGAGATTGTCATGGTTACAGACGTCAAATATCCAAAAAATGAATCTGAAGATTAA MTKLMWLILLAGNLCHFALADQIFPAQLGGTFSRNSRGPKYNIEFHPQDSPYSPDEDQESVFMPNKNGKNYLCYLPKVEKSKSGKPTVQLNMSSMIVESEKRVKLKTPDELLEALKEQCFVRQEGWWTYEFCYQKTLRQFHLEDEKVVVQEFVLGVYDAEATANLNENLSDISTLKDPRSKDASQRCAFIFISYEYHAHQYTNGTMCDLTNQPRETEVRFVCSEPRAMINSITELSTCKYALTVRCPTLCKHPLFQEERPVWYIINCNVLPDNYKETERSEELADEIVMVTDVKYPKNESED Homology
BLAST of ClCG06G011880 vs. NCBI nr
Match: XP_038878474.1 (protein OS-9 homolog isoform X2 [Benincasa hispida]) HSP 1 Score: 576.6 bits (1485), Expect = 1.2e-160 Identity = 286/302 (94.70%), Postives = 289/302 (95.70%), Query Frame = 0
BLAST of ClCG06G011880 vs. NCBI nr
Match: XP_038878473.1 (protein OS-9 homolog isoform X1 [Benincasa hispida]) HSP 1 Score: 572.0 bits (1473), Expect = 3.0e-159 Identity = 286/303 (94.39%), Postives = 289/303 (95.38%), Query Frame = 0
BLAST of ClCG06G011880 vs. NCBI nr
Match: XP_008443924.1 (PREDICTED: protein OS-9 homolog isoform X2 [Cucumis melo]) HSP 1 Score: 555.4 bits (1430), Expect = 2.9e-154 Identity = 275/303 (90.76%), Postives = 284/303 (93.73%), Query Frame = 0
BLAST of ClCG06G011880 vs. NCBI nr
Match: XP_008443923.1 (PREDICTED: protein OS-9 homolog isoform X1 [Cucumis melo]) HSP 1 Score: 550.8 bits (1418), Expect = 7.2e-153 Identity = 275/304 (90.46%), Postives = 284/304 (93.42%), Query Frame = 0
BLAST of ClCG06G011880 vs. NCBI nr
Match: XP_023530346.1 (protein OS-9 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 548.9 bits (1413), Expect = 2.7e-152 Identity = 264/302 (87.42%), Postives = 284/302 (94.04%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy Swiss-Prot
Match: Q8GWH3 (Protein OS-9 homolog OS=Arabidopsis thaliana OX=3702 GN=OS9 PE=1 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.2e-86 Identity = 160/281 (56.94%), Postives = 203/281 (72.24%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy Swiss-Prot
Match: Q67WM9 (Protein OS-9 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=OS9 PE=2 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 2.5e-71 Identity = 143/287 (49.83%), Postives = 193/287 (67.25%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy Swiss-Prot
Match: Q13438 (Protein OS-9 OS=Homo sapiens OX=9606 GN=OS9 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21 Identity = 81/302 (26.82%), Postives = 135/302 (44.70%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy Swiss-Prot
Match: Q3MHX6 (Protein OS-9 OS=Bos taurus OX=9913 GN=OS9 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.8e-21 Identity = 76/263 (28.90%), Postives = 119/263 (45.25%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy Swiss-Prot
Match: Q8K2C7 (Protein OS-9 OS=Mus musculus OX=10090 GN=Os9 PE=1 SV=2) HSP 1 Score: 100.9 bits (250), Expect = 2.6e-20 Identity = 84/310 (27.10%), Postives = 136/310 (43.87%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy TrEMBL
Match: A0A1S3B9X7 (protein OS-9 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487399 PE=4 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 1.4e-154 Identity = 275/303 (90.76%), Postives = 284/303 (93.73%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy TrEMBL
Match: A0A1S3B986 (protein OS-9 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487399 PE=4 SV=1) HSP 1 Score: 550.8 bits (1418), Expect = 3.5e-153 Identity = 275/304 (90.46%), Postives = 284/304 (93.42%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy TrEMBL
Match: A0A6J1EY24 (protein OS-9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111439427 PE=4 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151 Identity = 263/302 (87.09%), Postives = 283/302 (93.71%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy TrEMBL
Match: A0A0A0LWI4 (PRKCSH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G264000 PE=4 SV=1) HSP 1 Score: 544.3 bits (1401), Expect = 3.3e-151 Identity = 272/304 (89.47%), Postives = 282/304 (92.76%), Query Frame = 0
BLAST of ClCG06G011880 vs. ExPASy TrEMBL
Match: A0A6J1C180 (protein OS-9 homolog OS=Momordica charantia OX=3673 GN=LOC111007445 PE=4 SV=1) HSP 1 Score: 537.7 bits (1384), Expect = 3.1e-149 Identity = 258/302 (85.43%), Postives = 281/302 (93.05%), Query Frame = 0
BLAST of ClCG06G011880 vs. TAIR 10
Match: AT5G35080.1 (INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011), Glucosidase II beta subunit-like (InterPro:IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 321.2 bits (822), Expect = 8.7e-88 Identity = 160/281 (56.94%), Postives = 203/281 (72.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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