ClCG06G011290 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G011290
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	CG_Chr06: 24066958 .. 24072335 (-)
RNA-Seq Expression	ClCG06G011290
Synteny	ClCG06G011290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATTTTACCCTGGAATGTACGTGGGTTAGGCTCTCCCTCCAAAAGAACCTTAATAAAAAATGTTATTTCCGGTTATTGTCCTGACTTTGTTCTTTTAACAGAAACTAAACTTCAAAATGTCTCCAAAAAAATCATCAAATCAATCTGGAGCTCAATTAGTATAAAATGGATATCCTTAAAAGCTAATGGCAGATCTGATGGTATCATCCTTAATTATATGGGATGATCTTTGACACACAGTGACAAGTTACATGGAGAAAGATTATTCGATTTCAGCAAACGTTATATTGTCTGATGGTTTCAGCTGCTAGAAAACGACTATTTATGGACTTGCCAAAAGAAAAGAAAGAAACAAATTATTGACGAAGATCTCCAGCCTCAACAAAACTTGCTCTCCAAATTGGTTATTGGGAGGAGACTTCAATATCATCTAATAATCCAACAAAATACAGCATGAAGAAGTTCGACTCAGTCATCAGCCGTCTCGGTGTAAGCACTGATTTGCGTTGCCAAGCGTTGAGGTGCGGCCATGCATTTGTGACTATGCGCTTCAAAGGAAGAAGTGGCCGGGAGCGAGAGTAAGAATTTTTGGAAAGTAAAATCCTGGCTAAGCGTTGGACAAGCCCATGCATCGAAGGATAAGTAATTCTAGCGAGGAAGAAATGTGTTTGAACCATGCGCTAAAGTCGCTCTGCGTTGAGGACAGTCATGTGCTGAATTCACTCTGCGTTGAGGACAGCCATGCGCTGAAGTCGATGCGTTGAAGACAGACATGAGTTGAAGTCGCTCCACGTCGAAGACAGAGTGGTCTTGACGTGACGAAGATAGTGGTGTATGACTGAGTTGTATGCGTCAAAAGTAGGAAGCGTTGAGGACGACGCCATGCGTTGGGTGAGGCTAGTTGCTGAAGGCGTTGGAGGAGAATTTTAACATGAGCGCCTCACGTCGAACTGAGAACCCCGCGCCGGCCTGCGGGTGAGGGGTAAGTCGGCAACATTAATCTTGGTGTTTGTGAAGGCTAAGTCGGTAATATATATAGTTGGATTAATTAAATGTTTATTCATTTTTTAAGACATTTTCGAGAGCTTAAGTCGGTTTCATATTCCAGATAAACTTCAGGAGGAGATTTAGGAAGGTGTTCTTGTAGTTTTTGGGCGAAATTCCACTCGTTTCGATGTTGAAAACGGAGCTGGAACAGAAGATGGATTGCAGTCGCACATACTGAACAGTGGTTGATATTTGGAGTAGAACATATAGAAGAAGCCGAGTTTAGAGCTGAAATCTGGAGGTCAGTAAGTTAACATAATTCCTAACAAATCTTGTGAAGGATGATAAAGCTGAAATTGAAATTTATAATCTTGTGAAGGATGATAAAGCTGAAATTGAAATTTATTATGTGAATCTTTAGGGAAAAGCAGCACTTACAAGATTGTTAAGCAATCTGGAGCGGTATGAAGTGATTTTGGAATAACGAGGGAATGAAGAAGAGTTAAGCCTTGAAATTTTGAGGTAAGCTATAAAACTCAATTCTCTATAAGTTTGTAGAAAGGAAGAAGTTCTAAATCCATTGGAAATCATGACTTTTAATAGATTGAAGTAAGAACAAGAGGAAAGAAAGAATCACAGTGCAGGATGCTGCTAAAACCAAGTATCGGTGCGTTGTCTAAGTACTAGTAGCGAGACGAGTACTGCTAAGACGCAAAGGAGTTGTCCGTCTCACAAAACTCGCTAGATATCGCTGGGTATCGCTACTAAGGTAAGGTAACGCTAGTGTCGCTCCATCAAGTATCGCTAGTAATAACTCTTGTTGGTTGGTGTCGCTATGATTCTCGTTTATTAAGTTAGTTTAGAAAAGGAAGAAGATTCAATGTTGAAAAACGCAAGGTACATGTCTCTTGCAGGCCAAGAAGAAATAGGGAAAGTGTATAACCCACGTAAAGCTTAGAAAGAGTTGTGAGTGACTATTTTATTTTTCAATTCTATTTAATTAAAAATGTTCTTATGAAGTATGATTTACAATGAACTGTTTAATATGCATAATGTTGATTGCATTACTCATAAGGCATGTTATACATTTCTAAAGTTGATAGAAAACATTTTTATGAAATGTTATTGAATAAAGTTTTGTATGATTTCTATGAAAGGATTTTCATATGAATTATTATATGAACGAAATTCTAAAACGTTTTTGAGGAGGCTTAGTGCTCAAGGACACGAGAAGGCACGTGAGTTTCCCCGGGACCCAGTACTCAAGGACATGAAAAGGTACATGGGCAACCCGTCATATTTCTATGTGCACATAGAGGTTGATTTGGCTGGTGCGTCGAGTTTGCTCCGCATTGAGCCAGGGACGATTTCGACGTTGGGAGTGTTGAGCTTTGCTCCACCCCAACTAAGGTGATTTTTCGACGTTGAGTGCGTAGAAGCATTGCTCCGCCTCAACTAAGGGAAGAGTTGAAAAACTAAACTGATATTGATAAACTCCTTGGAAACCGCTCCTTTATGATTTAAGATTTGATTTATGAGATTAATGGGATTTTATAGAAAGTATGTTTAATTTGAGCAAAATGTTAAACTCTTACTTATTTATTATACATAACATGCCTGTTTTCAATGAATGTTCGTTTTACAAAAATTGGTCACTCACTAGGCTGTTAGCTTATGTTTTCGAGTGTTTTCCTTTTCCCCCCCAGGTAGCAAGGACGTTCCCGGTGCTTAGCCTACTTCAGCTCACCCTGCCTAAGTCTCGAGTTCTCAAAATACAGTCAAGTCTGAGAGTTGTATGTTGTCTATATTTTTATGTAAATGGCATGTAGATCATGTAGGTTAGAGTGGGGACTGTTGGTGGAGTTGTACATTGTATAATGGTTATGAAAGTGGAATTATGCTATGTAATAAAAATGTACTCTATACATGGAATTAGATCAAGTTATAAGCATGTGTAGTATGACTGAGTTCTATGTATGTATATGAATAAATGTATGCGCAGCAAGGCAGATAAGAAGAGACAATATGCGTCACAAGAGGGGTGATGTTTATTGTCTTCACATTCCCTTTCAGGATAGGTAGGTAATTCGAGAGGGGGTGTGACACTCGGCCTCATTGAACCTCCCCTAACAAATGGTAAATTAACATGGTCCAACCTCAGAGCTCATGTTGTCTTATCAAGATTAGACCGATTCCAATACACTCCTTAATGGGAAGAAAAAATTACCTCTCATTTTACCAGAACTTTGGCTAGAGTTACTTCGAATCACTTTCCCCTCATCCTCGAGAATTCATAACTTAGCTAGGGTCCCAGTCCATTCTGTTTCAACAACATCAACTTGGAGCTATATATATATAGCTTCAACAAAAATGTAAAGGACTGGTGGGACTTTACTAGTTAAATTGGTTTCCCCGGTTATTCCTTCAACAAGAGACTCAAACAACTCTCCAATCAAATAAAAAGTTGGCAGGCTAGGCAAAAGAAGGTGACAAACGAAGAGAAGAAATCTTGGATTCAAGAAATTGAAAGGATTGATAAGCTCGAAAGTTAGCAAAACCTCAGTGAAATCGACAGTGCTCGTAGAACCTCTTTGAAAATCGATCTCAGCACCGAAGCCGCTACATAAGCTCTGTTTTGGGCTCAACAATATAAAAGGCTTTGGCTACATGATGGGGATGAAAACTTGGCTTTTTTTCACAAAGTCTTCACGACAAGGCAACGTCAAAGTTTTATCTCTAAGATCCTGATAAACATAGGAATAGCTGCACCACAAACAACTCTATTGAAAATGTCTTCGTACAACATTTCAAAGATATCTTCATTGGAAAACACAAAAAATAGTGGTTTATTGACAACCTTGATTGGCAACCCATTAACCAATCCCAACAATCGCTTCTTTGTAACCCCTTCACATAAAAAGAGATACATTATGCCCTGCTTTCTATTGGCAATAATAAAGCTCCCGGACCAAGCTTCACTATGGAATTTTTTAAAAAGTCATGGAACACATTCAAGCCTGATATATTGAAAGTGTTACAAGACTTTTTTCAAAATAGTATCACAAACAACAATGTTAATGACACTTATATTGCACTGATTGCCAAGAAGGAGAAATGTCTTAAAGCTACTGATTATAGACCGATCGGCCTCACAACATCCCTTTATAAGATCATTGCCAAGACACTTGCGGAGAGGCTCAAACAAACGCTTCCATCATCCATATCCGAAAACCAATTGGCTTTTGTGAAAAACAAACAGATTATTGATGTTATCCTTATGGCAAATGAGGCTATTGACTTCTGGAGAATAAAAAACGAGAGGCTTCGATATAAAGCTCGACATTGAAAAAGCCTTTGGCAAGAGTAGTTGGAAGTTCATAGACTTCATGCTAAACAAAAAAGGTTTTCCCGTACAATGGAGAAAATGGCTCATGGCGTGCATGTCCAATGTGCAGTACTCCATCCTCATAAATGGCAAATTGAATGGGTGCATAAAACCAAACAAAGGAATTAGGCAAGGCGATTCGTTATCACCATTCGTGTTTGTCATCGTCATGGACTACCTCAGTAAATTATTTCAGAAACTCGAAGAACAAGGAAAAGTTAGAGTTTATGTTTCAGAAAATTGTCATCTCACACATCTACTTTTTGCTAATGACATTCTCATCTTTGCCGAAGATAATGACGAAGGACTTGAGAATATACACAACATCATTAAAACCTTTGAAGTTGCTACTGGGTTCAACATTAATATGAAAAAATCCACCTTTTGTTTGCCATTAACGTAAACAAAATTTGTGCTGAGATTGCATATAGATGGGGCTTAACACACCATTTTCTCCTTATTAGCTACCTGGGGGTCCCTCTTGGTGGCAAGCCACACACAAGCTTTTTGGGAGCATATTTTAGAGAATAATCAAAAGAAGCTCAATAACTGGAAATACTTTATACATCTTCAAAGGAGGAAAACTCACACTTATCCAATCCTCCCTGGCCAGCCTACCTACTTACATGATGACTGTCTTCAAAGCCCCCAAATCGGTTTACAAAATCATTGGAAAAAAATTGCAGAAACTTTCTGTGGAAATATAAAAATGGAGGCCATTATACTCACCTTATAAATTCGCCGACGGTTACTTCCTCTAAAGACAAAGGTGGCCTTGACATCAATACCTTGGAAGTTACTAATTTCTCTTTGCTTTGTAAATGACTAGTGTTTTTATGAAGAAGGCAACCCCCTCTGGAAGAGATTGATCCTTGCAAAATACAAACACAACTTTGTTGGAGAAATTCCCATGATGAGCAGTTTTTGTAGCGCAAAATCCCCTTGGACGTCCATCGTTAAGGGCCTCGATTGGTTCAAATCCAACTTATCCTGGAAGATAA

mRNA sequence

ATGAAGATTTTACCCTGGAATGTACGTGGGTTAGGCTCTCCCTCCAAAAGAACCTTAATAAAAAATGTTATTTCCGGTTATTGTCCTGACTTTGTTCTTTTAACAGAAACTAAACTTCAAAATGTCTCCAAAAAAATCATCAAATCAATCTGGAGCTCAATTAGTATAAAATGGATATCCTTAAAAGCTAATGGCAGATCTGATGTGACAAGTTACATGGAGAAAGATTATTCGATTTCAGCAAACCTGCTAGAAAACGACTATTTATGGACTTGCCAAAAGAAAAGAAAGAAACAAATTATTGACGAAGATCTCCAGCCTCAACAAAACTTGCTCTCCAAATTGACCGATTCCAATACACTCCTTAATGGGAAGAAAAAATTACCTCTCATTTTACCAGAACTTTGGCTAGAGTTACTTCGAATCACTTTCCCCTCATCCTCGAGAATTCATAACTTAGCTAGGGTCCCAGTCCATTCTGTTTCAACAACATCAACTTGGAGCTATATATATATAGCTTCAACAAAAATGACTGGTGGGACTTTACTAGTTAAATTGGTTTCCCCGGCTAGGCAAAAGAAGGTGACAAACGAAGAGAAGAAATCTTGGATTCAAGAAATTGAAAGGATTGATAAGCTCGAAACACCGAAGCCGCTACATAAGCTCTGTTTTGGGCTCAACAATATAAAAGGCTTTGGCTACATGATGGGGATGAAAACTTGGCTTTTTTTCACAAAGTCTTCACGACAAGGCAACGTCAAAATCCTGATAAACATAGGAATAGCTGCACCACAAACAACTCTATTGAAAATGTCTTCGTACAACATTTCAAAGATATCTTCATTGGAAAACACAAAAAATAGTGGCCATTATACTCACCTTATAAATTCGCCGACGGTTACTTCCTCTAAAGACAAAGGTGGCCTTGACATCAATACCTTGGAATGTTTTTATGAAGAAGGCAACCCCCTCTGGAAGAGATTGATCCTTGCAAAATACAAACACAACTTTGTTGGAGAAATTCCCATGATGAGCACGCAAAATCCCCTTGGACGTCCATCGTTAAGGGCCTCGATTGGTTCAAATCCAACTTATCCTGGAAGATAA

Coding sequence (CDS)

ATGAAGATTTTACCCTGGAATGTACGTGGGTTAGGCTCTCCCTCCAAAAGAACCTTAATAAAAAATGTTATTTCCGGTTATTGTCCTGACTTTGTTCTTTTAACAGAAACTAAACTTCAAAATGTCTCCAAAAAAATCATCAAATCAATCTGGAGCTCAATTAGTATAAAATGGATATCCTTAAAAGCTAATGGCAGATCTGATGTGACAAGTTACATGGAGAAAGATTATTCGATTTCAGCAAACCTGCTAGAAAACGACTATTTATGGACTTGCCAAAAGAAAAGAAAGAAACAAATTATTGACGAAGATCTCCAGCCTCAACAAAACTTGCTCTCCAAATTGACCGATTCCAATACACTCCTTAATGGGAAGAAAAAATTACCTCTCATTTTACCAGAACTTTGGCTAGAGTTACTTCGAATCACTTTCCCCTCATCCTCGAGAATTCATAACTTAGCTAGGGTCCCAGTCCATTCTGTTTCAACAACATCAACTTGGAGCTATATATATATAGCTTCAACAAAAATGACTGGTGGGACTTTACTAGTTAAATTGGTTTCCCCGGCTAGGCAAAAGAAGGTGACAAACGAAGAGAAGAAATCTTGGATTCAAGAAATTGAAAGGATTGATAAGCTCGAAACACCGAAGCCGCTACATAAGCTCTGTTTTGGGCTCAACAATATAAAAGGCTTTGGCTACATGATGGGGATGAAAACTTGGCTTTTTTTCACAAAGTCTTCACGACAAGGCAACGTCAAAATCCTGATAAACATAGGAATAGCTGCACCACAAACAACTCTATTGAAAATGTCTTCGTACAACATTTCAAAGATATCTTCATTGGAAAACACAAAAAATAGTGGCCATTATACTCACCTTATAAATTCGCCGACGGTTACTTCCTCTAAAGACAAAGGTGGCCTTGACATCAATACCTTGGAATGTTTTTATGAAGAAGGCAACCCCCTCTGGAAGAGATTGATCCTTGCAAAATACAAACACAACTTTGTTGGAGAAATTCCCATGATGAGCACGCAAAATCCCCTTGGACGTCCATCGTTAAGGGCCTCGATTGGTTCAAATCCAACTTATCCTGGAAGATAA

Protein sequence

MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWISLKANGRSDVTSYMEKDYSISANLLENDYLWTCQKKRKKQIIDEDLQPQQNLLSKLTDSNTLLNGKKKLPLILPELWLELLRITFPSSSRIHNLARVPVHSVSTTSTWSYIYIASTKMTGGTLLVKLVSPARQKKVTNEEKKSWIQEIERIDKLETPKPLHKLCFGLNNIKGFGYMMGMKTWLFFTKSSRQGNVKILINIGIAAPQTTLLKMSSYNISKISSLENTKNSGHYTHLINSPTVTSSKDKGGLDINTLECFYEEGNPLWKRLILAKYKHNFVGEIPMMSTQNPLGRPSLRASIGSNPTYPGR

Homology

[Close]

BLAST of ClCG06G011290 vs. NCBI nr
Match: XP_011650214.1 (uncharacterized protein LOC105434766 [Cucumis sativus] >KAE8652281.1 hypothetical protein Csa_022537 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-16
Identity = 62/144 (43.06%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 1   MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
           MKIL WNVRG+GS  KR  IK+VIS Y PDFV L+ETKL NV+ K++KSIWSSISIK+I 
Sbjct: 1   MKILAWNVRGIGSTQKRVQIKHVISDYAPDFVCLSETKLLNVNNKLVKSIWSSISIKYIF 60

Query: 61  LKANGRS------------DVTSYMEKDYSISANLLEND-YLW-------TCQKKRKKQI 120
            + +GRS             + +Y+  +++IS N +E D Y W          + R+K  
Sbjct: 61  KQVSGRSGGILLMWDDLKHQLINYVIGEFTISTNFVEADGYNWWITSVYDLVNRSRRKSF 120

Query: 121 IDEDLQPQQNLLSKLTDSNTLLNG 125
             E +      L++   SN LL G
Sbjct: 121 WQELMN-----LAQTCGSNWLLAG 139

[Close]

BLAST of ClCG06G011290 vs. NCBI nr
Match: TYK11012.1 (uncharacterized protein E5676_scaffold874G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-15
Identity = 60/132 (45.45%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 1   MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
           MK+L WN RGLGSPSKR LIKN I  Y PDFV+LTET L+  +K+IIKS W S SI WI 
Sbjct: 472 MKLLTWNARGLGSPSKRALIKNAIISYSPDFVILTETMLKITNKRIIKSFWPSNSINWIV 531

Query: 61  LKANGRS------------DVTSYMEKDYSISAN-LLENDYLWTC------QKKRKKQII 114
             A+G S             + S  E  +S+SAN  L N+  W         K+RK+   
Sbjct: 532 KNASGSSGGILILWDAQSHSLLSQEEAIFSLSANFFLNNNSSWWLTGLYGPDKRRKRIHF 591

[Close]

BLAST of ClCG06G011290 vs. NCBI nr
Match: KAA0058980.1 (uncharacterized protein E6C27_scaffold98G001710 [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-15
Identity = 60/132 (45.45%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 1   MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
           MK+L WN RGLGSPSKR LIKN I  Y PDFV+LTET L+  +K+IIKS W S SI WI 
Sbjct: 472 MKLLTWNARGLGSPSKRALIKNAIISYSPDFVILTETMLKITNKRIIKSFWPSNSINWIV 531

Query: 61  LKANGRS------------DVTSYMEKDYSISAN-LLENDYLWTC------QKKRKKQII 114
             A+G S             + S  E  +S+SAN  L N+  W         K+RK+   
Sbjct: 532 KNASGSSGGILILWDAQSHSLLSQEEAIFSLSANFFLNNNSSWWLTGLYGPDKRRKRIHF 591

[Close]

BLAST of ClCG06G011290 vs. NCBI nr
Match: XP_022145142.1 (uncharacterized protein LOC111014657 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-13
Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 1  MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
          M IL WNVRGLGS SKR  IK+ I+  CPD V+L+ETK  +++ K IKS+WSSISI W S
Sbjct: 1  MNILAWNVRGLGSASKRATIKDTITSLCPDIVILSETKSSSINNKFIKSLWSSISIAWAS 60

Query: 61 LKANGRS 68
          L A+G S
Sbjct: 61 LDASGAS 67

[Close]

BLAST of ClCG06G011290 vs. NCBI nr
Match: TYJ97060.1 (hypothetical protein E5676_scaffold506G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 6.8e-12
Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 1  MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
          MK L WN RGLGSPSKR  IKN+IS Y  D V++TETKL   S   ++SIW+   +K+ S
Sbjct: 1  MKSLCWNTRGLGSPSKRAQIKNLISSYDTDLVIVTETKLHISSSFNLRSIWNKAGVKFPS 60

Query: 61 LKANGRS------------DVTSYMEKDYSISANLLEND 88
          L +NG S             V SY E+++S+S N+L  D
Sbjct: 61 LNSNGYSGGILILRNDINFKVASYKEENHSLSVNILNLD 99

[Close]

BLAST of ClCG06G011290 vs. ExPASy TrEMBL
Match: A0A5A7UV84 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001710 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-15
Identity = 60/132 (45.45%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 1   MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
           MK+L WN RGLGSPSKR LIKN I  Y PDFV+LTET L+  +K+IIKS W S SI WI 
Sbjct: 472 MKLLTWNARGLGSPSKRALIKNAIISYSPDFVILTETMLKITNKRIIKSFWPSNSINWIV 531

Query: 61  LKANGRS------------DVTSYMEKDYSISAN-LLENDYLWTC------QKKRKKQII 114
             A+G S             + S  E  +S+SAN  L N+  W         K+RK+   
Sbjct: 532 KNASGSSGGILILWDAQSHSLLSQEEAIFSLSANFFLNNNSSWWLTGLYGPDKRRKRIHF 591

[Close]

BLAST of ClCG06G011290 vs. ExPASy TrEMBL
Match: A0A5D3CI86 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00540 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-15
Identity = 60/132 (45.45%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 1   MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
           MK+L WN RGLGSPSKR LIKN I  Y PDFV+LTET L+  +K+IIKS W S SI WI 
Sbjct: 472 MKLLTWNARGLGSPSKRALIKNAIISYSPDFVILTETMLKITNKRIIKSFWPSNSINWIV 531

Query: 61  LKANGRS------------DVTSYMEKDYSISAN-LLENDYLWTC------QKKRKKQII 114
             A+G S             + S  E  +S+SAN  L N+  W         K+RK+   
Sbjct: 532 KNASGSSGGILILWDAQSHSLLSQEEAIFSLSANFFLNNNSSWWLTGLYGPDKRRKRIHF 591

[Close]

BLAST of ClCG06G011290 vs. ExPASy TrEMBL
Match: A0A6J1CVN2 (uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014657 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-13
Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 1  MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
          M IL WNVRGLGS SKR  IK+ I+  CPD V+L+ETK  +++ K IKS+WSSISI W S
Sbjct: 1  MNILAWNVRGLGSASKRATIKDTITSLCPDIVILSETKSSSINNKFIKSLWSSISIAWAS 60

Query: 61 LKANGRS 68
          L A+G S
Sbjct: 61 LDASGAS 67

[Close]

BLAST of ClCG06G011290 vs. ExPASy TrEMBL
Match: A0A5D3BB44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G001280 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.3e-12
Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 1  MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
          MK L WN RGLGSPSKR  IKN+IS Y  D V++TETKL   S   ++SIW+   +K+ S
Sbjct: 1  MKSLCWNTRGLGSPSKRAQIKNLISSYDTDLVIVTETKLHISSSFNLRSIWNKAGVKFPS 60

Query: 61 LKANGRS------------DVTSYMEKDYSISANLLEND 88
          L +NG S             V SY E+++S+S N+L  D
Sbjct: 61 LNSNGYSGGILILRNDINFKVASYKEENHSLSVNILNLD 99

[Close]

BLAST of ClCG06G011290 vs. ExPASy TrEMBL
Match: A0A438JKK7 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_190 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.9e-09
Identity = 31/84 (36.90%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 1  MKILPWNVRGLGSPSKRTLIKNVISGYCPDFVLLTETKLQNVSKKIIKSIWSSISIKWIS 60
          MKI+ WNVRGLGS +KR ++K+ +    PD V++ ETK +N  ++ + S+W+  +  W++
Sbjct: 1  MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVA 60

Query: 61 LKANGRSDVTSYMEKDYSISANLL 85
          L A+G S     +E++  ++++LL
Sbjct: 61 LPASGASANFDAIEQEGGLNSDLL 84

The following BLAST results are available for this feature:

BLAST of ClCG06G011290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650214.1	2.0e-16	43.06	uncharacterized protein LOC105434766 [Cucumis sativus] >KAE8652281.1 hypothetica...	[more]
TYK11012.1	6.5e-15	45.45	uncharacterized protein E5676_scaffold874G00540 [Cucumis melo var. makuwa]	[more]
KAA0058980.1	6.5e-15	45.45	uncharacterized protein E6C27_scaffold98G001710 [Cucumis melo var. makuwa]	[more]
XP_022145142.1	2.1e-13	61.19	uncharacterized protein LOC111014657 [Momordica charantia]	[more]
TYJ97060.1	6.8e-12	46.46	hypothetical protein E5676_scaffold506G001280 [Cucumis melo var. makuwa]	[more]

BLAST of ClCG06G011290 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG06G011290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UV84	3.2e-15	45.45	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3CI86	3.2e-15	45.45	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1CVN2	1.0e-13	61.19	uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5D3BB44	3.3e-12	46.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A438JKK7	9.9e-09	36.90	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]

BLAST of ClCG06G011290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 1..105 e-value: 3.3E-8 score: 35.6
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 1..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G011290.1	ClCG06G011290.1	mRNA