ClCG06G009420 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G009420
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Ulp1-like peptidase
Location	CG_Chr06: 15777698 .. 15778782 (-)
RNA-Seq Expression	ClCG06G009420
Synteny	ClCG06G009420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGTGAGGAAGACGCGGCTAGTCCTTCCTTAGTTGTACTTATCGACCCTAAGCCTGAGGTATGCTCTATTTTAATCTAGTATTCCATGTAGAACTATTAATTTCGTTAATGCTTTCTCCAATCATGTAGGCTGAGGAGTTCGATGATGTTGTTCTACTTTCCGGACTAGTACCAGTTGGGAGAGACAGAACTACGAGGAAGAGGAGAGCCCCATGGAAGCTCCATAGTCTAGTACATTCCCAACTAGGTGGGAGGAAGAAGTGTAAGATAAAGTTGTACAATCTAATGTCCAAGATCCCTGTTCATAACGAACAAAAATCCAAGACGTACATGGACACGATAGATAACATTCATCAGACTCGGAGGACTGTCCAATCGATTCAGAGAAAGCCGTGGTTCGAGAGCTTGTTGACACCGAACACATTTACAAACGATGATGTGAGTACTTTTCATTCGTTTACTTATGACTTATGTATTTGATTTATGTTCATAGACAATAGACACAATATTCTTATTCCTCCATAAGAAGATATTGGACCATGCGCATGCAACCCAAGTGAAGAAGAGCTTCATCGCCGTTGACAGAGTTGTCGCAATGAGTCAAAATTTCTTATCCAACTCCTTAAATTTATTTCTTATTTCTATGCACTGAATTCCTTACCTTGTTTGAAGTACTTTTCCCGTCATAGTCTCAAATTATACGAGGAGCTTAAGCAAGGGACTAACCCCTTGGAGTTGAAGTACACTTGGTTGAATGACTCCACCTTGCTTAACTATGTGGATGGGAAACAGTCGGACTACAACATCTCTTGGTGCATGGTCGACTACATTTACATGTCATACAACGTCGCAGGATGCCACTGGGTGTTGTTGGTGATTGATATGGTTGTGGGGCAGATATTGGTTTGGGACTCATTGATTGCCCTTACATCAAATGTTAACTTATCAAAGAAGCTAAATAATATGCGGACGATACTTCCCGCGTTATTAAAGAAGGTGGTGTTTCCTACTGTCGAAGCCGCAATTGCCAGTGACACCTTAGAGGGTTTATCGAGTGAACACAGCACCAGAGCAGACTAG

mRNA sequence

ATGTCAGGTGAGGAAGACGCGGCTAGTCCTTCCTTAGTTGTACTTATCGACCCTAAGCCTGAGGCTGAGGAGTTCGATGATGTTGTTCTACTTTCCGGACTAGTACCAGTTGGGAGAGACAGAACTACGAGGAAGAGGAGAGCCCCATGGAAGCTCCATAGTCTAGTACATTCCCAACTAGGTGGGAGGAAGAAGTGTAAGATAAAGTTGTACAATCTAATGTCCAAGATCCCTGTTCATAACGAACAAAAATCCAAGACGTACATGGACACGATAGATAACATTCATCAGACTCGGAGGACTGTCCAATCGATTCAGAGAAAGCCGTGGTTCGAGAGCTTGTTGACACCGAACACATTTACAAACGATGATTACTTTTCCCGTCATAGTCTCAAATTATACGAGGAGCTTAAGCAAGGGACTAACCCCTTGGAGTTGAAGTACACTTGGTTGAATGACTCCACCTTGCTTAACTATGTGGATGGGAAACAGTCGGACTACAACATCTCTTGGTGCATGGTCGACTACATTTACATGTCATACAACGTCGCAGGATGCCACTGGGTGTTGTTGGTGATTGATATGGTTGTGGGGCAGATATTGGTTTGGGACTCATTGATTGCCCTTACATCAAATGTTAACTTATCAAAGAAGCTAAATAATATGCGGACGATACTTCCCGCGTTATTAAAGAAGGTGGTGTTTCCTACTGTCGAAGCCGCAATTGCCAGTGACACCTTAGAGGGTTTATCGAGTGAACACAGCACCAGAGCAGACTAG

Coding sequence (CDS)

ATGTCAGGTGAGGAAGACGCGGCTAGTCCTTCCTTAGTTGTACTTATCGACCCTAAGCCTGAGGCTGAGGAGTTCGATGATGTTGTTCTACTTTCCGGACTAGTACCAGTTGGGAGAGACAGAACTACGAGGAAGAGGAGAGCCCCATGGAAGCTCCATAGTCTAGTACATTCCCAACTAGGTGGGAGGAAGAAGTGTAAGATAAAGTTGTACAATCTAATGTCCAAGATCCCTGTTCATAACGAACAAAAATCCAAGACGTACATGGACACGATAGATAACATTCATCAGACTCGGAGGACTGTCCAATCGATTCAGAGAAAGCCGTGGTTCGAGAGCTTGTTGACACCGAACACATTTACAAACGATGATTACTTTTCCCGTCATAGTCTCAAATTATACGAGGAGCTTAAGCAAGGGACTAACCCCTTGGAGTTGAAGTACACTTGGTTGAATGACTCCACCTTGCTTAACTATGTGGATGGGAAACAGTCGGACTACAACATCTCTTGGTGCATGGTCGACTACATTTACATGTCATACAACGTCGCAGGATGCCACTGGGTGTTGTTGGTGATTGATATGGTTGTGGGGCAGATATTGGTTTGGGACTCATTGATTGCCCTTACATCAAATGTTAACTTATCAAAGAAGCTAAATAATATGCGGACGATACTTCCCGCGTTATTAAAGAAGGTGGTGTTTCCTACTGTCGAAGCCGCAATTGCCAGTGACACCTTAGAGGGTTTATCGAGTGAACACAGCACCAGAGCAGACTAG

Protein sequence

MSGEEDAASPSLVVLIDPKPEAEEFDDVVLLSGLVPVGRDRTTRKRRAPWKLHSLVHSQLGGRKKCKIKLYNLMSKIPVHNEQKSKTYMDTIDNIHQTRRTVQSIQRKPWFESLLTPNTFTNDDYFSRHSLKLYEELKQGTNPLELKYTWLNDSTLLNYVDGKQSDYNISWCMVDYIYMSYNVAGCHWVLLVIDMVVGQILVWDSLIALTSNVNLSKKLNNMRTILPALLKKVVFPTVEAAIASDTLEGLSSEHSTRAD

Homology

[Close]

BLAST of ClCG06G009420 vs. NCBI nr
Match: KAA0067914.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 4.8e-20
Identity = 49/100 (49.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 133 LYEELKQGTNPLELKYTWLNDSTLLNYVDGKQSDYNISWCMVDYIYMSYNVAGCHWVLLV 192
           LYEE+++GT+P+++ Y W+ D+T+L Y+ GK  DY+ +W  V++IYM YN+ GCH VL+ 
Sbjct: 135 LYEEIQRGTHPIDIGYIWIKDATILKYMMGKLPDYDKTWMDVNFIYMPYNIKGCHCVLIR 194

Query: 193 IDMVVGQILVWDSLIALTSNVNLSKKLNNMRTILPALLKK 233
           + MV G+I VWDS I LT +++L K+L+NMR ++P LL +
Sbjct: 195 LHMVEGKINVWDSFIDLTLDLDLDKELDNMRCVVPILLHR 234

[Close]

BLAST of ClCG06G009420 vs. NCBI nr
Match: TYK04300.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-19
Identity = 48/100 (48.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 133 LYEELKQGTNPLELKYTWLNDSTLLNYVDGKQSDYNISWCMVDYIYMSYNVAGCHWVLLV 192
           LYEE+++GT+P+++ Y W+ D+T+L Y+ GK  DY+ +W  V++IYM YN+ GCH VL++
Sbjct: 158 LYEEIQRGTHPIDIGYIWIKDATILKYMMGKLPDYDKTWMDVNFIYMPYNIKGCHCVLIM 217

Query: 193 IDMVVGQILVWDSLIALTSNVNLSKKLNNMRTILPALLKK 233
           + MV  +I VWDS I LT +++L K+L+NMR ++P LL +
Sbjct: 218 LHMVEEKINVWDSFIDLTLDLDLDKELDNMRCVVPILLHR 257

[Close]

BLAST of ClCG06G009420 vs. NCBI nr
Match: XP_022158807.1 (uncharacterized protein LOC111025273 [Momordica charantia])

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-14
Identity = 57/174 (32.76%), Postives = 80/174 (45.98%), Query Frame = 0


Query: 89  MDTIDNIHQTRRTVQSIQRKPWFESLLTPNTFTNDDYFS-------------RHSLKL-- 148
           MD       +R T   I+ K WF  LL P    +D+Y               +H L++  
Sbjct: 1   MDDPSTDDNSRSTSVGIKYKSWFGLLLDPQFQLDDEYIDSLMMLTARKVEKCKHLLRVQF 60

Query: 149 -----------------YEELKQGTNPLELKYTWLNDSTLLNYVDGKQSDYNISWCMVDY 208
                            Y  +K G  P +  Y W  + T+  YV G+QSDY+  W   D 
Sbjct: 61  AIGDVLLSNLLRRTDGPYAAMKPGVLPSKCTYDWRQERTIFRYVLGRQSDYDTLWSEADI 120

Query: 209 IYMSYNVAGCHWVLLVIDMVVGQILVWDSLIALTSNVNLSKKLNNMRTILPALL 231
           +Y   N+ G HWV++ ID+V G + VWDSL A+T   +L K L  M TI+PA+L
Sbjct: 121 VYTRMNIGGNHWVMIGIDLVEGDLTVWDSLQAITPLEDLEKALKPMCTIIPAIL 174

[Close]

BLAST of ClCG06G009420 vs. NCBI nr
Match: XP_022148308.1 (uncharacterized protein LOC111016993 [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 3.7e-12
Identity = 51/171 (29.82%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 98  TRRTVQSIQRKPWFESLLTPNTFTNDDYFSRHSLKLYEELKQGTNPLELKYT-------- 157
           TR+TV SI+ K WF +LL P  +   +      + L ++L+Q  +    K+T        
Sbjct: 110 TRKTVYSIKNKAWFRNLLRPGNWCTAEVVDELFMLLRKKLEQRPDLCSRKFTTGDLVLAN 169

Query: 158 ---------------------------W-LNDSTLLNYVDGKQSDYNISWCMVDYIYMSY 217
                                      W   D +++ Y DG  +DY + W  VD IY+ +
Sbjct: 170 YFRRKDDJYACMQSDSSLPSKVAAEYDWDGRDESIMGYTDGTHTDYPLRWMEVDAIYIPF 229

Query: 218 NVAGCHWVLLVIDMVVGQILVWDSLIALTSNVNLSKKLNNMRTILPALLKK 233
           N+ G HWV++ ID+  G+I+VWDSL ++T++  +   L  M TI+P +L K
Sbjct: 230 NIRGKHWVMVCIDLEEGEIVVWDSLNSMTTDHAMEDHLKVMHTIIPVMLFK 280

[Close]

BLAST of ClCG06G009420 vs. NCBI nr
Match: XP_022148137.1 (uncharacterized protein LOC111016890 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 6.2e-12
Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 146 LKYTWLNDSTLLNYVDGKQSDYNISWCMVDYIYMSYNVAGCHWVLLVIDMVVGQILVWDS 205
           + Y W  ++T+  YV G+QSD+N+ W   D +Y   NV G HWV+L ID+V G I VWDS
Sbjct: 10  INYPWXEENTIWRYVHGRQSDHNVPWSDADIVYTPMNVGGNHWVMLGIDLVQGDITVWDS 69

Query: 206 LIALTSNVNLSKKLNNMRTILPALL 231
           L   T    L K+L  M TILP LL
Sbjct: 70  LQTATPLDELEKELKPMCTILPTLL 94

[Close]

BLAST of ClCG06G009420 vs. ExPASy TrEMBL
Match: A0A5A7VKG9 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00800 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-20
Identity = 49/100 (49.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 133 LYEELKQGTNPLELKYTWLNDSTLLNYVDGKQSDYNISWCMVDYIYMSYNVAGCHWVLLV 192
           LYEE+++GT+P+++ Y W+ D+T+L Y+ GK  DY+ +W  V++IYM YN+ GCH VL+ 
Sbjct: 135 LYEEIQRGTHPIDIGYIWIKDATILKYMMGKLPDYDKTWMDVNFIYMPYNIKGCHCVLIR 194

Query: 193 IDMVVGQILVWDSLIALTSNVNLSKKLNNMRTILPALLKK 233
           + MV G+I VWDS I LT +++L K+L+NMR ++P LL +
Sbjct: 195 LHMVEGKINVWDSFIDLTLDLDLDKELDNMRCVVPILLHR 234

[Close]

BLAST of ClCG06G009420 vs. ExPASy TrEMBL
Match: A0A5D3BYV2 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00290 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.7e-20
Identity = 48/100 (48.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 133 LYEELKQGTNPLELKYTWLNDSTLLNYVDGKQSDYNISWCMVDYIYMSYNVAGCHWVLLV 192
           LYEE+++GT+P+++ Y W+ D+T+L Y+ GK  DY+ +W  V++IYM YN+ GCH VL++
Sbjct: 158 LYEEIQRGTHPIDIGYIWIKDATILKYMMGKLPDYDKTWMDVNFIYMPYNIKGCHCVLIM 217

Query: 193 IDMVVGQILVWDSLIALTSNVNLSKKLNNMRTILPALLKK 233
           + MV  +I VWDS I LT +++L K+L+NMR ++P LL +
Sbjct: 218 LHMVEEKINVWDSFIDLTLDLDLDKELDNMRCVVPILLHR 257

[Close]

BLAST of ClCG06G009420 vs. ExPASy TrEMBL
Match: A0A6J1DY60 (uncharacterized protein LOC111025273 OS=Momordica charantia OX=3673 GN=LOC111025273 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.5e-15
Identity = 57/174 (32.76%), Postives = 80/174 (45.98%), Query Frame = 0


Query: 89  MDTIDNIHQTRRTVQSIQRKPWFESLLTPNTFTNDDYFS-------------RHSLKL-- 148
           MD       +R T   I+ K WF  LL P    +D+Y               +H L++  
Sbjct: 1   MDDPSTDDNSRSTSVGIKYKSWFGLLLDPQFQLDDEYIDSLMMLTARKVEKCKHLLRVQF 60

Query: 149 -----------------YEELKQGTNPLELKYTWLNDSTLLNYVDGKQSDYNISWCMVDY 208
                            Y  +K G  P +  Y W  + T+  YV G+QSDY+  W   D 
Sbjct: 61  AIGDVLLSNLLRRTDGPYAAMKPGVLPSKCTYDWRQERTIFRYVLGRQSDYDTLWSEADI 120

Query: 209 IYMSYNVAGCHWVLLVIDMVVGQILVWDSLIALTSNVNLSKKLNNMRTILPALL 231
           +Y   N+ G HWV++ ID+V G + VWDSL A+T   +L K L  M TI+PA+L
Sbjct: 121 VYTRMNIGGNHWVMIGIDLVEGDLTVWDSLQAITPLEDLEKALKPMCTIIPAIL 174

[Close]

BLAST of ClCG06G009420 vs. ExPASy TrEMBL
Match: A0A6J1D3R7 (uncharacterized protein LOC111016993 OS=Momordica charantia OX=3673 GN=LOC111016993 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-12
Identity = 51/171 (29.82%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 98  TRRTVQSIQRKPWFESLLTPNTFTNDDYFSRHSLKLYEELKQGTNPLELKYT-------- 157
           TR+TV SI+ K WF +LL P  +   +      + L ++L+Q  +    K+T        
Sbjct: 110 TRKTVYSIKNKAWFRNLLRPGNWCTAEVVDELFMLLRKKLEQRPDLCSRKFTTGDLVLAN 169

Query: 158 ---------------------------W-LNDSTLLNYVDGKQSDYNISWCMVDYIYMSY 217
                                      W   D +++ Y DG  +DY + W  VD IY+ +
Sbjct: 170 YFRRKDDLYACMQSDSSLPSKVAAEYDWDGRDESIMGYTDGTHTDYPLRWMEVDAIYIPF 229

Query: 218 NVAGCHWVLLVIDMVVGQILVWDSLIALTSNVNLSKKLNNMRTILPALLKK 233
           N+ G HWV++ ID+  G+I+VWDSL ++T++  +   L  M TI+P +L K
Sbjct: 230 NIRGKHWVMVCIDLEEGEIVVWDSLNSMTTDHAMEDHLKVMHTIIPVMLFK 280

[Close]

BLAST of ClCG06G009420 vs. ExPASy TrEMBL
Match: A0A6J1D492 (uncharacterized protein LOC111016890 OS=Momordica charantia OX=3673 GN=LOC111016890 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-12
Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 146 LKYTWLNDSTLLNYVDGKQSDYNISWCMVDYIYMSYNVAGCHWVLLVIDMVVGQILVWDS 205
           + Y W  ++T+  YV G+QSD+N+ W   D +Y   NV G HWV+L ID+V G I VWDS
Sbjct: 10  INYPWXEENTIWRYVHGRQSDHNVPWSDADIVYTPMNVGGNHWVMLGIDLVQGDITVWDS 69

Query: 206 LIALTSNVNLSKKLNNMRTILPALL 231
           L   T    L K+L  M TILP LL
Sbjct: 70  LQTATPLDELEKELKPMCTILPTLL 94

The following BLAST results are available for this feature:

BLAST of ClCG06G009420 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067914.1	4.8e-20	49.00	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
TYK04300.1	1.4e-19	48.00	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
XP_022158807.1	1.3e-14	32.76	uncharacterized protein LOC111025273 [Momordica charantia]	[more]
XP_022148308.1	3.7e-12	29.82	uncharacterized protein LOC111016993 [Momordica charantia]	[more]
XP_022148137.1	6.2e-12	48.24	uncharacterized protein LOC111016890 [Momordica charantia]	[more]

BLAST of ClCG06G009420 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG06G009420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VKG9	2.3e-20	49.00	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G...	[more]
A0A5D3BYV2	6.7e-20	48.00	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G...	[more]
A0A6J1DY60	6.5e-15	32.76	uncharacterized protein LOC111025273 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D3R7	1.8e-12	29.82	uncharacterized protein LOC111016993 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1D492	3.0e-12	48.24	uncharacterized protein LOC111016890 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of ClCG06G009420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.395.10	Adenoviral Proteinase; Chain A	coord: 71..245 e-value: 5.3E-7 score: 31.2
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PFAM	PF02902	Peptidase_C48	coord: 174..233 e-value: 9.2E-9 score: 35.5
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 148..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G009420.1	ClCG06G009420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016020	membrane
molecular_function	GO:0008234	cysteine-type peptidase activity