
ClCG06G009310 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCAAAGACTCCCATGCCTATCTTGGCTGGACTAACCCAACCGGCAATTTCCGTCTTCCTGAATTGGGAGAGCAAGAACGAGTCTCTCCTTTTTTTGGGGGCAAAATGATTGTTCTAAAATGGCTATTCCTTACTACTCCTTGTGATGCAGTGGAACCATGGCAATTAGGATCTCAAGACGCAGCAACACCTATGATGCAAGGGATAATAGACTTACATCATGATATCTTTTTCTTCCTCAAGGACGAATTGAATAAGTGAGCATTCATCCCCAATGCCTTCTGTTAAGCTGCTGATACTCTTTCCCTTCGTTTGGCGGCAAGAGTCTTTCAAAAACTCGAGTTCAAGACCTCCGATTCAAATCCGATCGACTAGATCCGATCACATGATCAAGAAACTATTCATGAAGAAGAAGTTCCAGCCGAGAGACTTGTTCTTGCTCTCCCAATTCAGGAAGACGGAAATCGCCGGTTGGGTTGGTCCAACTTTAAGTTTCTCATTACCGCAGGAGTCCGTTTATGAAACATAA ATGCCCAAAGACTCCCATGCCTATCTTGGCTGGACTAACCCAACCGGCAATTTCCGTCTTCCTGAATTGGGAGAGCAAGAACGAGTCTCTCCTTTTTTTGGGGGCAAAATGATTGTTCTAAAATGGCTATTCCTTACTACTCCTTGTGATGCAGTGGAACCATGGCAATTAGGATCTCAAGACGCAGCAACACCTATGATGCAAGGGATAATAGACTTACATCATGATATCTTTTTCTTCCTCAAGGACGAATTGAATAATTCAAGACCTCCGATTCAAATCCGATCGACTAGATCCGATCACATGATCAAGAAACTATTCATGAAGAAGAAGTTCCAGCCGAGAGACTTGTTCTTGCTCTCCCAATTCAGGAAGACGGAAATCGCCGGTTGGGTTGGTCCAACTTTAAGTTTCTCATTACCGCAGGAGTCCGTTTATGAAACATAA ATGCCCAAAGACTCCCATGCCTATCTTGGCTGGACTAACCCAACCGGCAATTTCCGTCTTCCTGAATTGGGAGAGCAAGAACGAGTCTCTCCTTTTTTTGGGGGCAAAATGATTGTTCTAAAATGGCTATTCCTTACTACTCCTTGTGATGCAGTGGAACCATGGCAATTAGGATCTCAAGACGCAGCAACACCTATGATGCAAGGGATAATAGACTTACATCATGATATCTTTTTCTTCCTCAAGGACGAATTGAATAATTCAAGACCTCCGATTCAAATCCGATCGACTAGATCCGATCACATGATCAAGAAACTATTCATGAAGAAGAAGTTCCAGCCGAGAGACTTGTTCTTGCTCTCCCAATTCAGGAAGACGGAAATCGCCGGTTGGGTTGGTCCAACTTTAAGTTTCTCATTACCGCAGGAGTCCGTTTATGAAACATAA MPKDSHAYLGWTNPTGNFRLPELGEQERVSPFFGGKMIVLKWLFLTTPCDAVEPWQLGSQDAATPMMQGIIDLHHDIFFFLKDELNNSRPPIQIRSTRSDHMIKKLFMKKKFQPRDLFLLSQFRKTEIAGWVGPTLSFSLPQESVYET Homology
BLAST of ClCG06G009310 vs. NCBI nr
Match: KAB9173090.1 (hypothetical protein FH972_026993 [Carpinus fangiana]) HSP 1 Score: 147.9 bits (372), Expect = 6.9e-32 Identity = 70/92 (76.09%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of ClCG06G009310 vs. NCBI nr
Match: XP_015868752.1 (uncharacterized protein LOC107406162 [Ziziphus jujuba] >XP_015868754.1 uncharacterized protein LOC107406163 [Ziziphus jujuba]) HSP 1 Score: 139.8 bits (351), Expect = 1.9e-29 Identity = 66/90 (73.33%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of ClCG06G009310 vs. NCBI nr
Match: KAF3452243.1 (hypothetical protein FNV43_RR08341 [Rhamnella rubrinervis]) HSP 1 Score: 135.2 bits (339), Expect = 4.6e-28 Identity = 64/90 (71.11%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of ClCG06G009310 vs. NCBI nr
Match: KAA0050490.1 (cytochrome c oxidase subunit 2 [Cucumis melo var. makuwa]) HSP 1 Score: 132.9 bits (333), Expect = 2.3e-27 Identity = 64/85 (75.29%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of ClCG06G009310 vs. NCBI nr
Match: GFS28310.1 (hypothetical protein Acr_00g0001100 [Actinidia rufa]) HSP 1 Score: 129.0 bits (323), Expect = 3.3e-26 Identity = 64/91 (70.33%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy Swiss-Prot
Match: P92559 (Uncharacterized mitochondrial protein AtMg01280 OS=Arabidopsis thaliana OX=3702 GN=AtMg01280 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.5e-18 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy Swiss-Prot
Match: P93285 (Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=COX2 PE=1 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 5.0e-17 Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy Swiss-Prot
Match: P98012 (Cytochrome c oxidase subunit 2 OS=Beta vulgaris OX=161934 GN=COX2 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.2e-16 Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy Swiss-Prot
Match: P08744 (Cytochrome c oxidase subunit 2 OS=Pisum sativum OX=3888 GN=COX2 PE=3 SV=2) HSP 1 Score: 85.1 bits (209), Expect = 7.2e-16 Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy Swiss-Prot
Match: P05491 (Cytochrome c oxidase subunit 2 OS=Glycine max OX=3847 GN=COX2 PE=3 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 2.1e-15 Identity = 37/42 (88.10%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy TrEMBL
Match: A0A5N6L5W4 (Cytochrome c oxidase subunit 2 OS=Carpinus fangiana OX=176857 GN=FH972_026993 PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 3.3e-32 Identity = 70/92 (76.09%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy TrEMBL
Match: A0A6P3YWJ4 (Cytochrome c oxidase subunit 2 OS=Ziziphus jujuba OX=326968 GN=LOC107406162 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 9.1e-30 Identity = 66/90 (73.33%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy TrEMBL
Match: A0A5A7U5K2 (Cytochrome c oxidase subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001170 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 64/85 (75.29%), Postives = 67/85 (78.82%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy TrEMBL
Match: A0A7J0D8B7 (Cytochrome c oxidase subunit 2 OS=Actinidia rufa OX=165716 GN=Acr_00g0001450 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.6e-26 Identity = 64/91 (70.33%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of ClCG06G009310 vs. ExPASy TrEMBL
Match: A0A7J0D6G2 (Cytochrome c oxidase subunit 2 OS=Actinidia rufa OX=165716 GN=Acr_00g0001100 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.6e-26 Identity = 64/91 (70.33%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of ClCG06G009310 vs. TAIR 10
Match: AT2G07695.1 (Cytochrome C oxidase subunit II-like, transmembrane domain ) HSP 1 Score: 92.8 bits (229), Expect = 2.5e-19 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of ClCG06G009310 vs. TAIR 10
Match: ATMG00160.1 (cytochrome oxidase 2 ) HSP 1 Score: 92.8 bits (229), Expect = 2.5e-19 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of ClCG06G009310 vs. TAIR 10
Match: ATMG01280.1 (Cytochrome C oxidase subunit II-like, transmembrane domain ) HSP 1 Score: 92.8 bits (229), Expect = 2.5e-19 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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