
ClCG06G009290 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTATATGGGGGGGTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTTGCATGAAAGAATCAAACTTTTCGTCCCCCAGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAAGTAGGAGTAACGGGTACTATTTTTGATGTCCCTAGAAGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAATGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTGCACCAATCGAAGTTTCGCGCATTGTAGATGGTGGTAA ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTATATGGGGGGGTTGGATGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAACTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTGCACCAATCGAAGTTTCGCGCATTGTAGATGGTGGTAA ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTATATGGGGGGGTTGGATGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAACTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTGCACCAATCGAAGTTTCGCGCATTGTAGATGGTGGTAA MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLDAQTGCDVIKLMVDAIENIKPICEVENYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW Homology
BLAST of ClCG06G009290 vs. NCBI nr
Match: XP_023521058.1 (uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.1 bits (401), Expect = 2.3e-35 Identity = 98/185 (52.97%), Postives = 103/185 (55.68%), Query Frame = 0
BLAST of ClCG06G009290 vs. NCBI nr
Match: XP_038876459.1 (ribosomal protein S7, mitochondrial [Benincasa hispida]) HSP 1 Score: 151.8 bits (382), Expect = 3.7e-33 Identity = 96/185 (51.89%), Postives = 100/185 (54.05%), Query Frame = 0
BLAST of ClCG06G009290 vs. NCBI nr
Match: MBA0790852.1 (hypothetical protein [Gossypium harknessii]) HSP 1 Score: 116.7 bits (291), Expect = 1.3e-22 Identity = 74/158 (46.84%), Postives = 79/158 (50.00%), Query Frame = 0
BLAST of ClCG06G009290 vs. NCBI nr
Match: KAF9660742.1 (hypothetical protein SADUNF_SadunfMtG0004900 [Salix dunnii]) HSP 1 Score: 115.5 bits (288), Expect = 2.9e-22 Identity = 61/83 (73.49%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of ClCG06G009290 vs. NCBI nr
Match: XP_021840260.1 (uncharacterized protein LOC110780146 [Spinacia oleracea]) HSP 1 Score: 113.6 bits (283), Expect = 1.1e-21 Identity = 73/159 (45.91%), Postives = 78/159 (49.06%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy Swiss-Prot
Match: Q01902 (Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.7e-20 Identity = 57/109 (52.29%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy Swiss-Prot
Match: P92557 (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.8e-20 Identity = 57/109 (52.29%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy Swiss-Prot
Match: Q9MF82 (Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 1.8e-19 Identity = 55/109 (50.46%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy Swiss-Prot
Match: P26867 (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=3 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13 Identity = 44/105 (41.90%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy Swiss-Prot
Match: A7HM56 (30S ribosomal protein S7 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) OX=381764 GN=rpsG PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.8e-06 Identity = 37/107 (34.58%), Postives = 50/107 (46.73%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy TrEMBL
Match: A0A7J9FZT5 (Ribosomal_S7 domain-containing protein OS=Gossypium harknessii OX=34285 GN=Gohar_015473 PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 6.4e-23 Identity = 74/158 (46.84%), Postives = 79/158 (50.00%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy TrEMBL
Match: A0A803N8Z9 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 5.4e-22 Identity = 73/159 (45.91%), Postives = 78/159 (49.06%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy TrEMBL
Match: A0A803N7E0 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 5.4e-22 Identity = 73/159 (45.91%), Postives = 78/159 (49.06%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy TrEMBL
Match: A0A803MBG4 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.7e-21 Identity = 71/159 (44.65%), Postives = 78/159 (49.06%), Query Frame = 0
BLAST of ClCG06G009290 vs. ExPASy TrEMBL
Match: A0A142BZ01 (Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20 Identity = 62/109 (56.88%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of ClCG06G009290 vs. TAIR 10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein ) HSP 1 Score: 99.4 bits (246), Expect = 2.0e-21 Identity = 57/109 (52.29%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of ClCG06G009290 vs. TAIR 10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7 ) HSP 1 Score: 99.4 bits (246), Expect = 2.0e-21 Identity = 57/109 (52.29%), Postives = 62/109 (56.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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