ClCG06G009210 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G009210
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	ATP synthase subunit a
Location	CG_Chr06: 15200968 .. 15201449 (-)
RNA-Seq Expression	ClCG06G009210
Synteny	ClCG06G009210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTCACTTTTACATTTTCATTATTTTGCAATCCCTTGGGTATGCTACCTTATAGCTTCATAGTTTCAAGTCATTTTCTTATTACTTTAGGTCTCTAATTTTCTTTTTTTATTGATATTACTATGGTGGGATTTCAAAGAAATAGGCTTCATTTTTAAAGTTTCTCATTACCCTCAGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGGGCTAATCCCTTATTATTTTCGTGCATTTAGCTCAGGAATACGTTTAGTTACCAATGTGATGGTCGATCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATAATCTTTTCTATTTCATACGAGATCCTAGTTCTTTATTGTTCTTGCATTAACTGGTTTGGAATTAGGTGTAGCTATATCACAAGCTCATGTTTCTACAATCTCAAGATGTATTTACTTGAATGATGTTATTACCAATTAG

mRNA sequence

ATGTCTGTCACTTTTACATTTTCATTATTTTGCAATCCCTTGGGTATGCTACCTTATAGCTTCATAGTTTCAAGTCATTTTCTTATTACTTTAGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGGGCTAATCCCTTATTATTTTCGTGCATTTAGCTCAGGAATACGTTTAGTTACCAATGTGATGGTCGATCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATAATCTTTTCTATTTCATACGAGATCCTAGTGTAGCTATATCACAAGCTCATGTTTCTACAATCTCAAGATGTATTTACTTGAATGATGTTATTACCAATTAG

Coding sequence (CDS)

ATGTCTGTCACTTTTACATTTTCATTATTTTGCAATCCCTTGGGTATGCTACCTTATAGCTTCATAGTTTCAAGTCATTTTCTTATTACTTTAGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGGGCTAATCCCTTATTATTTTCGTGCATTTAGCTCAGGAATACGTTTAGTTACCAATGTGATGGTCGATCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATAATCTTTTCTATTTCATACGAGATCCTAGTGTAGCTATATCACAAGCTCATGTTTCTACAATCTCAAGATGTATTTACTTGAATGATGTTATTACCAATTAG

Protein sequence

MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLGVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIRDPSVAISQAHVSTISRCIYLNDVITN

Homology

[Close]

BLAST of ClCG06G009210 vs. NCBI nr
Match: ACD02170.1 (ATPase subunit 6, partial [Humiria wurdackii])

HSP 1 Score: 159.8 bits (403), Expect = 1.4e-35
Identity = 95/159 (59.75%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 62  ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVAFQRNGLHFLSFFLPA 121

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIP+ FRA SSGIRL  N+M  HS VKILSG AWTMLCMN+LFYFI
Sbjct: 122 GVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNDLFYFI 181

[Close]

BLAST of ClCG06G009210 vs. NCBI nr
Match: YP_009430479.1 (ATP synthase subunit 6 [Solanum lycopersicum] >ATD51584.1 ATP synthase subunit 6 [Solanum lycopersicum] >ATD51585.1 ATP synthase subunit 6 [Solanum lycopersicum])

HSP 1 Score: 158.7 bits (400), Expect = 3.1e-35
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 272 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 331

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 332 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 391

[Close]

BLAST of ClCG06G009210 vs. NCBI nr
Match: ATY70550.1 (Atp6, partial [Solanum commersonii] >ATY70557.1 Atp6, partial [Solanum commersonii])

HSP 1 Score: 158.7 bits (400), Expect = 3.1e-35
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 275 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 334

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 335 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 394

[Close]

BLAST of ClCG06G009210 vs. NCBI nr
Match: AUS83467.1 (Atp6, partial [Solanum tuberosum])

HSP 1 Score: 158.7 bits (400), Expect = 3.1e-35
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 253 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 312

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 313 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 372

[Close]

BLAST of ClCG06G009210 vs. NCBI nr
Match: YP_009919617.1 (ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97361.1 ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97688.1 ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97784.1 ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97883.1 ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97988.1 ATP synthase subunit 6 [Solanum aethiopicum])

HSP 1 Score: 158.7 bits (400), Expect = 3.1e-35
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 198 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQKNGLHFLSFLLPA 257

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 258 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 317

[Close]

BLAST of ClCG06G009210 vs. ExPASy Swiss-Prot
Match: P05499 (ATP synthase subunit a OS=Nicotiana tabacum OX=4097 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-37
Identity = 94/159 (59.12%), Postives = 99/159 (62.26%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 221 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 280

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+L YFI
Sbjct: 281 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFI 340

[Close]

BLAST of ClCG06G009210 vs. ExPASy Swiss-Prot
Match: P68526 (ATP synthase subunit a OS=Triticum timopheevii OX=4570 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-34
Identity = 90/157 (57.32%), Postives = 97/157 (61.78%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLF NP GM+P+SF V+SHFLITL                             
Sbjct: 218 ISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPA 277

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 115
           GVPLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTML +NN+FYFI
Sbjct: 278 GVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFI 337

[Close]

BLAST of ClCG06G009210 vs. ExPASy Swiss-Prot
Match: Q04654 (ATP synthase subunit a OS=Vicia faba OX=3906 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-34
Identity = 90/155 (58.06%), Postives = 94/155 (60.65%), Query Frame = 0


Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL-----------------------------GV 62
           VTFTF LFCN  GM+PYSF V+SHFLITL                             GV
Sbjct: 123 VTFTFLLFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFLLPAGV 182

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIRD 115
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN+L YFI D
Sbjct: 183 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDLLYFIGD 242

[Close]

BLAST of ClCG06G009210 vs. ExPASy Swiss-Prot
Match: P68527 (ATP synthase subunit a OS=Triticum aestivum OX=4565 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-34
Identity = 90/157 (57.32%), Postives = 97/157 (61.78%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLF NP GM+P+SF V+SHFLITL                             
Sbjct: 218 ISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPA 277

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 115
           GVPLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTML +NN+FYFI
Sbjct: 278 GVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFI 337

[Close]

BLAST of ClCG06G009210 vs. ExPASy Swiss-Prot
Match: P07925 (ATP synthase subunit a OS=Zea mays OX=4577 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-33
Identity = 88/157 (56.05%), Postives = 97/157 (61.78%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLF NP GM+P+SF V+SHFLITL                             
Sbjct: 115 ISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPA 174

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 115
           GVPLPLAPFLVLL LI + FRA SSGIRL  N+M  HS VKILSGFAWTML +NN+FYF+
Sbjct: 175 GVPLPLAPFLVLLELISHCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLFLNNIFYFL 234

[Close]

BLAST of ClCG06G009210 vs. ExPASy TrEMBL
Match: B2VPV2 (ATP synthase subunit a (Fragment) OS=Humiria wurdackii OX=289676 GN=atp6 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.8e-36
Identity = 95/159 (59.75%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 62  ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVAFQRNGLHFLSFFLPA 121

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIP+ FRA SSGIRL  N+M  HS VKILSG AWTMLCMN+LFYFI
Sbjct: 122 GVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNDLFYFI 181

[Close]

BLAST of ClCG06G009210 vs. ExPASy TrEMBL
Match: A0A290WL00 (ATP synthase subunit a OS=Solanum lycopersicum OX=4081 GN=atp6 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 272 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 331

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 332 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 391

[Close]

BLAST of ClCG06G009210 vs. ExPASy TrEMBL
Match: A0A7S9DFY2 (ATP synthase subunit 6 OS=Solanum stenotomum subsp. goniocalyx OX=1050191 GN=atp6 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 214 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 273

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 274 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 333

[Close]

BLAST of ClCG06G009210 vs. ExPASy TrEMBL
Match: A0A2H4T3Q7 (ATP synthase subunit a (Fragment) OS=Solanum commersonii OX=4109 GN=atp6 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 275 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 334

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 335 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 394

[Close]

BLAST of ClCG06G009210 vs. ExPASy TrEMBL
Match: A0A7S9DGW1 (ATP synthase subunit 6 OS=Solanum tuberosum subsp. andigenum OX=80418 GN=atp6 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35
Identity = 95/159 (59.75%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL----------------------------- 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL                             
Sbjct: 214 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 273

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 117
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 274 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 333

[Close]

BLAST of ClCG06G009210 vs. TAIR 10
Match: AT2G07741.1 (ATPase, F0 complex, subunit A protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-32
Identity = 85/157 (54.14%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL-----------------------------GV 62
           VTF F LFCN  GM+PYSF V+SHFLITL                             GV
Sbjct: 226 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGV 285

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI-- 117
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN++FYFI  
Sbjct: 286 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGA 345

[Close]

BLAST of ClCG06G009210 vs. TAIR 10
Match: ATMG01170.1 (ATPase, F0 complex, subunit A protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-32
Identity = 85/157 (54.14%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL-----------------------------GV 62
           VTF F LFCN  GM+PYSF V+SHFLITL                             GV
Sbjct: 190 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGV 249

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI-- 117
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN++FYFI  
Sbjct: 250 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGA 309

[Close]

BLAST of ClCG06G009210 vs. TAIR 10
Match: ATMG00410.1 (ATPase subunit 6-1 )

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-32
Identity = 85/157 (54.14%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL-----------------------------GV 62
           VTF F LFCN  GM+PYSF V+SHFLITL                             GV
Sbjct: 226 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGV 285

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI-- 117
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN++FYFI  
Sbjct: 286 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGA 345

The following BLAST results are available for this feature:

BLAST of ClCG06G009210 vs. NCBI nr


Match Name	E-value	Identity	Description
ACD02170.1	1.4e-35	59.75	ATPase subunit 6, partial [Humiria wurdackii]	[more]
YP_009430479.1	3.1e-35	59.75	ATP synthase subunit 6 [Solanum lycopersicum] >ATD51584.1 ATP synthase subunit 6...	[more]
ATY70550.1	3.1e-35	59.75	Atp6, partial [Solanum commersonii] >ATY70557.1 Atp6, partial [Solanum commerson...	[more]
AUS83467.1	3.1e-35	59.75	Atp6, partial [Solanum tuberosum]	[more]
YP_009919617.1	3.1e-35	59.75	ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97361.1 ATP synthase subunit 6 ...	[more]

BLAST of ClCG06G009210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05499	2.0e-37	59.12	ATP synthase subunit a OS=Nicotiana tabacum OX=4097 GN=ATP6 PE=3 SV=1	[more]
P68526	1.6e-34	57.32	ATP synthase subunit a OS=Triticum timopheevii OX=4570 GN=ATP6 PE=3 SV=1	[more]
Q04654	1.6e-34	58.06	ATP synthase subunit a OS=Vicia faba OX=3906 GN=ATP6 PE=3 SV=1	[more]
P68527	1.6e-34	57.32	ATP synthase subunit a OS=Triticum aestivum OX=4565 GN=ATP6 PE=3 SV=1	[more]
P07925	1.0e-33	56.05	ATP synthase subunit a OS=Zea mays OX=4577 GN=ATP6 PE=3 SV=1	[more]

BLAST of ClCG06G009210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B2VPV2	6.8e-36	59.75	ATP synthase subunit a (Fragment) OS=Humiria wurdackii OX=289676 GN=atp6 PE=3 SV...	[more]
A0A290WL00	1.5e-35	59.75	ATP synthase subunit a OS=Solanum lycopersicum OX=4081 GN=atp6 PE=3 SV=1	[more]
A0A7S9DFY2	1.5e-35	59.75	ATP synthase subunit 6 OS=Solanum stenotomum subsp. goniocalyx OX=1050191 GN=atp...	[more]
A0A2H4T3Q7	1.5e-35	59.75	ATP synthase subunit a (Fragment) OS=Solanum commersonii OX=4109 GN=atp6 PE=3 SV...	[more]
A0A7S9DGW1	1.5e-35	59.75	ATP synthase subunit 6 OS=Solanum tuberosum subsp. andigenum OX=80418 GN=atp6 PE...	[more]

BLAST of ClCG06G009210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07741.1	2.0e-32	54.14	ATPase, F0 complex, subunit A protein	[more]
ATMG01170.1	2.0e-32	54.14	ATPase, F0 complex, subunit A protein	[more]
ATMG00410.1	2.0e-32	54.14	ATPase subunit 6-1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000568	ATP synthase, F0 complex, subunit A	PRINTS	PR00123	ATPASEA	coord: 32..47 score: 48.41 coord: 99..114 score: 40.45 coord: 52..74 score: 36.44
IPR035908	ATP synthase, F0 complex, subunit A superfamily	GENE3D	1.20.120.220	ATP synthase, F0 complex, subunit A	coord: 22..118 e-value: 3.5E-8 score: 35.7
IPR035908	ATP synthase, F0 complex, subunit A superfamily	SUPERFAMILY	81336	F1F0 ATP synthase subunit A	coord: 4..111
IPR045083	ATP synthase, F0 complex, subunit A, bacterial/mitochondria	PANTHER	PTHR11410	ATP SYNTHASE SUBUNIT A	coord: 2..32 coord: 32..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G009210.1	ClCG06G009210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity