ClCG06G009060 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G009060
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Pentatricopeptide repeat-containing protein
Location	CG_Chr06: 14276924 .. 14278742 (+)
RNA-Seq Expression	ClCG06G009060
Synteny	ClCG06G009060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGTTCTTATTGTTCCTTTTCCAGTTTGATGCAGATCATTCTGCACCCAGGAAGACCAAACATCTCTAAGGTAAGTCGATTTACTTGTGGAAGTTATTGTGCTTCTGCTTTAGCATAATTGCAGTGCAGCTTGTGGATTGCTTTTGTAATGAATAAATCCAGCAATTATGTCTTACAGCCAATTTATCACAGTTCATATTTATAATCTTTTTGCTTTCTTTAATGTTTTATGCTGAGCGACGGATACATTGTTGAGTTAAATGGTTTTGAGTTTCAAGTCTGGTTGCATGTTAAATTGTCTGCTCATTTGATTTCACTTTTATCTTTTCTTGATTTGAAGGCAGAGCTGAAGGAAAAGTTAGCAAGAATATATGATGTGAAGGATGCAAATGCAATTTGTTTTTAAGGTCCGATCTCACTTCGGAGGTGGAAAATCAACTAGGCTTGGTTTGATTTATGATTATGTTGAAAATGCCAAAAAATATGAGCCCAAGTACATTTGTCTCATCCGCCATTTCAGTACGTCAAACTCTTCTTGGAGTGGCTCCGTCGCGCCTTCTAAAGATGACTATTTTGCCGCAATCCACCATATCTCCCACATTGTTCGCCGAGACTTCTACATGGAGCGCACCCTCAACAAGCTCCAAATCTCCTACCTCAATTCTGAGCTTGTTTTTAGAGTCCTTCGCGCTTGCTCCAACTCTGGTACTGAGTCCTTCCGTTTCTTCAATTGGGCTTGCACTCACAACCCCTCTTACAAACCCACTACCCTTGAATTCGAAGAGCTCGTCAAAACCCTAGCTCGGACCAAAAAGTATACCACAATGTGGAAAGTTCTTCTTCAGATGAAGACGCAGAATCTCAAAATTTCACCGGAAACGATATCATTCATAATTCAAGAGTATGGTAAGCAAGGCCTTGTCGATAATGCAGTTACCATATTCAATCAATGTTCTAAATCTATCGATTGTCCACAAACAGTTGAGGTCTATAACGCATTACTTTTTGCGCTTTGTGAGGTTAAGATGTTTCATGGAGCTTATGCGTTGATTAGGAGGATGATTAGAAAAGGGGTAACTCCTGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAGGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTAGAAGGATTGCTGAATGCAGGGTATTTAGAATCTGCTAAGGATATGGTTAGAAAAATGACAAAAGAAGGATTTGTGCCTGATATAGGGACTTTTAATTCTCTGATTAATGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATAAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTAATTCCAGCAACTTCAAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTGTATGGAGGATGGACATATACCGTTTCCAAGTCTTTATGGACCAATACTTAAAGGAATGTGTAAAATGGGTCAGTTTGATGATGCATTTTGCTTTTTCAGTGATATGAAACATAAGGGGCATCCACCAAATCGGCCAGTGTACACAATGTTGATAACAATGTGTGGACGTGGAGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAAATGGCTGAATTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACTGATGGATTAAAGAACTGTGGAAAGCATGATTTAGCTAAGAAGATCGAGCAGCTTGAAGTTTCTATTCGAGGCATTTGA

mRNA sequence

TTTAGTTCTTATTGTTCCTTTTCCAGTTTGATGCAGATCATTCTGCACCCAGGAAGACCAAACATCTCTAAGGTCCGATCTCACTTCGGAGGTGGAAAATCAACTAGGCTTGGTTTGATTTATGATTATGTTGAAAATGCCAAAAAATATGAGCCCAAGTACATTTGTCTCATCCGCCATTTCAGTACGTCAAACTCTTCTTGGAGTGGCTCCGTCGCGCCTTCTAAAGATGACTATTTTGCCGCAATCCACCATATCTCCCACATTGTTCGCCGAGACTTCTACATGGAGCGCACCCTCAACAAGCTCCAAATCTCCTACCTCAATTCTGAGCTTGTTTTTAGAGTCCTTCGCGCTTGCTCCAACTCTGGTACTGAGTCCTTCCGTTTCTTCAATTGGGCTTGCACTCACAACCCCTCTTACAAACCCACTACCCTTGAATTCGAAGAGCTCGTCAAAACCCTAGCTCGGACCAAAAAGTATACCACAATGTGGAAAGTTCTTCTTCAGATGAAGACGCAGAATCTCAAAATTTCACCGGAAACGATATCATTCATAATTCAAGAGTATGGTAAGCAAGGCCTTGTCGATAATGCAGTTACCATATTCAATCAATGTTCTAAATCTATCGATTGTCCACAAACAGTTGAGGTCTATAACGCATTACTTTTTGCGCTTTGTGAGGTTAAGATGTTTCATGGAGCTTATGCGTTGATTAGGAGGATGATTAGAAAAGGGGTAACTCCTGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAGGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTAGAAGGATTGCTGAATGCAGGGTATTTAGAATCTGCTAAGGATATGGTTAGAAAAATGACAAAAGAAGGATTTGTGCCTGATATAGGGACTTTTAATTCTCTGATTAATGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATAAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTAATTCCAGCAACTTCAAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTGTATGGAGGATGGACATATACCGTTTCCAAGTCTTTATGGACCAATACTTAAAGGAATGTGTAAAATGGGTCAGTTTGATGATGCATTTTGCTTTTTCAGTGATATGAAACATAAGGGGCATCCACCAAATCGGCCAGTGTACACAATGTTGATAACAATGTGTGGACGTGGAGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAAATGGCTGAATTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACTGATGGATTAAAGAACTGTGGAAAGCATGATTTAGCTAAGAAGATCGAGCAGCTTGAAGTTTCTATTCGAGGCATTTGA

Coding sequence (CDS)

TTTAGTTCTTATTGTTCCTTTTCCAGTTTGATGCAGATCATTCTGCACCCAGGAAGACCAAACATCTCTAAGGTCCGATCTCACTTCGGAGGTGGAAAATCAACTAGGCTTGGTTTGATTTATGATTATGTTGAAAATGCCAAAAAATATGAGCCCAAGTACATTTGTCTCATCCGCCATTTCAGTACGTCAAACTCTTCTTGGAGTGGCTCCGTCGCGCCTTCTAAAGATGACTATTTTGCCGCAATCCACCATATCTCCCACATTGTTCGCCGAGACTTCTACATGGAGCGCACCCTCAACAAGCTCCAAATCTCCTACCTCAATTCTGAGCTTGTTTTTAGAGTCCTTCGCGCTTGCTCCAACTCTGGTACTGAGTCCTTCCGTTTCTTCAATTGGGCTTGCACTCACAACCCCTCTTACAAACCCACTACCCTTGAATTCGAAGAGCTCGTCAAAACCCTAGCTCGGACCAAAAAGTATACCACAATGTGGAAAGTTCTTCTTCAGATGAAGACGCAGAATCTCAAAATTTCACCGGAAACGATATCATTCATAATTCAAGAGTATGGTAAGCAAGGCCTTGTCGATAATGCAGTTACCATATTCAATCAATGTTCTAAATCTATCGATTGTCCACAAACAGTTGAGGTCTATAACGCATTACTTTTTGCGCTTTGTGAGGTTAAGATGTTTCATGGAGCTTATGCGTTGATTAGGAGGATGATTAGAAAAGGGGTAACTCCTGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAGGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTAGAAGGATTGCTGAATGCAGGGTATTTAGAATCTGCTAAGGATATGGTTAGAAAAATGACAAAAGAAGGATTTGTGCCTGATATAGGGACTTTTAATTCTCTGATTAATGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATAAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTAATTCCAGCAACTTCAAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTGTATGGAGGATGGACATATACCGTTTCCAAGTCTTTATGGACCAATACTTAAAGGAATGTGTAAAATGGGTCAGTTTGATGATGCATTTTGCTTTTTCAGTGATATGAAACATAAGGGGCATCCACCAAATCGGCCAGTGTACACAATGTTGATAACAATGTGTGGACGTGGAGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAAATGGCTGAATTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACTGATGGATTAAAGAACTGTGGAAAGCATGATTTAGCTAAGAAGATCGAGCAGCTTGAAGTTTCTATTCGAGGCATTTGA

Protein sequence

FSSYCSFSSLMQIILHPGRPNISKVRSHFGGGKSTRLGLIYDYVENAKKYEPKYICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI

Homology

[Close]

BLAST of ClCG06G009060 vs. NCBI nr
Match: XP_038879743.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Benincasa hispida] >XP_038879744.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Benincasa hispida] >XP_038879746.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Benincasa hispida] >XP_038879747.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Benincasa hispida])

HSP 1 Score: 900.6 bits (2326), Expect = 6.1e-258
Identity = 436/480 (90.83%), Postives = 443/480 (92.29%), Query Frame = 0


Query: 14  ILHPGRPNISKVRSHFGGGKSTRLGLIYDYVENAKKYEPKYICLIRHFSTSNSSWSGSVA 73
           +LHPGRPN+S                             KYICLIRHFSTSNSSW+GSVA
Sbjct: 15  VLHPGRPNVS-----------------------------KYICLIRHFSTSNSSWNGSVA 74

Query: 74  PSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNW 133
           PSKDDYFAAIHHISHIVRRDFYMERTLNKL+ISYLNSELVFRVLRACSNSGTESFRFFNW
Sbjct: 75  PSKDDYFAAIHHISHIVRRDFYMERTLNKLRISYLNSELVFRVLRACSNSGTESFRFFNW 134

Query: 134 ACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQ 193
           ACTHNPSY+PTTLEFEELVKTLARTKKY TMWKVL QMK QNLKISPETISFIIQEYGKQ
Sbjct: 135 ACTHNPSYQPTTLEFEELVKTLARTKKYATMWKVLQQMKMQNLKISPETISFIIQEYGKQ 194

Query: 194 GLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKT 253
           GLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKT
Sbjct: 195 GLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKT 254

Query: 254 YGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMT 313
           YGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGY ESAKDMVRKMT
Sbjct: 255 YGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYFESAKDMVRKMT 314

Query: 314 KEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRID 373
           KEG VPDIGTFNSLI+VICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRID
Sbjct: 315 KEGSVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRID 374

Query: 374 EAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPVYTMLI 433
           EAFRLLHCC+EDGHIPFPSLYGPILKGMCK  QFDDAFCFFSDMK KGHPPNRPVYTMLI
Sbjct: 375 EAFRLLHCCIEDGHIPFPSLYGPILKGMCKRSQFDDAFCFFSDMKRKGHPPNRPVYTMLI 434

Query: 434 TMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 493
           TMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI
Sbjct: 435 TMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 465

[Close]

BLAST of ClCG06G009060 vs. NCBI nr
Match: XP_004142520.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis sativus] >KGN66807.1 hypothetical protein Csa_007547 [Cucumis sativus])

HSP 1 Score: 877.5 bits (2266), Expect = 5.5e-251
Identity = 420/441 (95.24%), Postives = 430/441 (97.51%), Query Frame = 0


Query: 53  KYICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSEL 112
           +YI L RHFS SNS  +GS APSKDDYFAAIHHISHIVRRDFYMERTLNKL+IS LNSEL
Sbjct: 15  RYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSEL 74

Query: 113 VFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMK 172
           VFRVLRACSNSGTESFRFFNWAC+HNPSY+PTTLEFEELVKTLART+KYTTMWKVLLQMK
Sbjct: 75  VFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMK 134

Query: 173 TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF 232
           TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF
Sbjct: 135 TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF 194

Query: 233 HGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLL 292
           HGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKM+EAQEFLEEMSQKGFNPPLRGRDLL
Sbjct: 195 HGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLL 254

Query: 293 VEGLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGL 352
           VEGLLNAGYLESAKDMVRKMTKEG VPDIGTFNSLI+VICNSGEVDFCINIFHEVCKLGL
Sbjct: 255 VEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGL 314

Query: 353 CPDINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFC 412
           CPDINTYKILIPATSKVGRIDEAFRLLHCC+EDGH+PFPSLYGPILKGMCK GQFDDAFC
Sbjct: 315 CPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYGPILKGMCKRGQFDDAFC 374

Query: 413 FFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLK 472
           FF DMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE GLPPISRCFDMVTDGLK
Sbjct: 375 FFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLK 434

Query: 473 NCGKHDLAKKIEQLEVSIRGI 494
           NCGKHDLAKKIEQLEVSIRGI
Sbjct: 435 NCGKHDLAKKIEQLEVSIRGI 455

[Close]

BLAST of ClCG06G009060 vs. NCBI nr
Match: XP_008462724.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis melo] >KAA0062598.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK29718.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 869.0 bits (2244), Expect = 2.0e-248
Identity = 415/440 (94.32%), Postives = 429/440 (97.50%), Query Frame = 0


Query: 54  YICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELV 113
           YI LIR FS SNSS +GS APSKDDYFAAIHHISHIVRRDFYMERTLNKL+ISYLNSELV
Sbjct: 16  YISLIRCFSNSNSSVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISYLNSELV 75

Query: 114 FRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKT 173
           FRVLRACSN GTESFRFFNWAC+HNPSY+PTTLE EELVKTLART+KYTTMWKVLLQMKT
Sbjct: 76  FRVLRACSNCGTESFRFFNWACSHNPSYQPTTLELEELVKTLARTRKYTTMWKVLLQMKT 135

Query: 174 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 233
           QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH
Sbjct: 136 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 195

Query: 234 GAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLV 293
           GAYALIRRMI+KGVTPDKKTYGTLVTGWCSAGKM+EAQEFLEEMSQKGFNPPLRGRDLLV
Sbjct: 196 GAYALIRRMIKKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLV 255

Query: 294 EGLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLC 353
           EGLLNAGYLESAKDMVRKMTKEG VPDIGTFNSLI+VICNSGEVDFCINIFHEVCKLGLC
Sbjct: 256 EGLLNAGYLESAKDMVRKMTKEGCVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLC 315

Query: 354 PDINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCF 413
           PDINTYKILIPATSKVGRIDEAFRLL+CC+EDGH+PFPSLYGPI+KGMCK GQFDDAFCF
Sbjct: 316 PDINTYKILIPATSKVGRIDEAFRLLNCCIEDGHVPFPSLYGPIIKGMCKRGQFDDAFCF 375

Query: 414 FSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKN 473
           F DMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE GLPPISRCFDMVTDGLK+
Sbjct: 376 FGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLKS 435

Query: 474 CGKHDLAKKIEQLEVSIRGI 494
           CGKHDLAKKIE+LEVSIRGI
Sbjct: 436 CGKHDLAKKIEKLEVSIRGI 455

[Close]

BLAST of ClCG06G009060 vs. NCBI nr
Match: XP_022988097.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita maxima])

HSP 1 Score: 852.8 bits (2202), Expect = 1.4e-243
Identity = 407/438 (92.92%), Postives = 427/438 (97.49%), Query Frame = 0


Query: 55  ICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVF 114
           I LIRHFSTSNSS +GS  PSKDDYFAAIHHIS+IVRRD YMERTLNKL+ISYLNSELVF
Sbjct: 29  IFLIRHFSTSNSSSNGSGTPSKDDYFAAIHHISNIVRRDIYMERTLNKLRISYLNSELVF 88

Query: 115 RVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQ 174
           RVLRACSNSGTESFRFFNWAC++NPSY+PTTLEFEELVKTLARTKKYTTMWKVL QMKTQ
Sbjct: 89  RVLRACSNSGTESFRFFNWACSNNPSYQPTTLEFEELVKTLARTKKYTTMWKVLHQMKTQ 148

Query: 175 NLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHG 234
           NLKISPETISF+I+EYGKQGLVD AVTIFNQCSKSIDCPQTVEVYNALLFALCE+KMFHG
Sbjct: 149 NLKISPETISFVIEEYGKQGLVDGAVTIFNQCSKSIDCPQTVEVYNALLFALCEIKMFHG 208

Query: 235 AYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVE 294
           AYALIRRMIRKGVTPDKKTYG LVTGWCS+GKM+EAQ+FLEEMSQKGFNPPLRGRDLLVE
Sbjct: 209 AYALIRRMIRKGVTPDKKTYGILVTGWCSSGKMKEAQQFLEEMSQKGFNPPLRGRDLLVE 268

Query: 295 GLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCP 354
           GLLNAGYLESAK+MVRKMTKEG VPD+GTFNSLINVIC+SGEVDFCINI+HEVCKLGLCP
Sbjct: 269 GLLNAGYLESAKNMVRKMTKEGSVPDLGTFNSLINVICDSGEVDFCINIYHEVCKLGLCP 328

Query: 355 DINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFF 414
           DINTYKILIPATSKVGRIDEAFRLL+ C+EDGHIPFPSLYGPI+KGMCK GQFDDAFCFF
Sbjct: 329 DINTYKILIPATSKVGRIDEAFRLLNYCIEDGHIPFPSLYGPIIKGMCKRGQFDDAFCFF 388

Query: 415 SDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNC 474
           SDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLK+C
Sbjct: 389 SDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKSC 448

Query: 475 GKHDLAKKIEQLEVSIRG 493
           GKHDLAKKIEQLEVSIRG
Sbjct: 449 GKHDLAKKIEQLEVSIRG 466

[Close]

BLAST of ClCG06G009060 vs. NCBI nr
Match: XP_022960812.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita moschata])

HSP 1 Score: 848.2 bits (2190), Expect = 3.6e-242
Identity = 406/438 (92.69%), Postives = 425/438 (97.03%), Query Frame = 0


Query: 55  ICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVF 114
           I LIRHFSTSNSS +GS  PSKDDYFAAIHHIS+IVRRD YMERTLNKL+ISYLNSELVF
Sbjct: 29  IFLIRHFSTSNSSSNGSGTPSKDDYFAAIHHISNIVRRDIYMERTLNKLRISYLNSELVF 88

Query: 115 RVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQ 174
           RVLRACSNSGTESFRFFNWAC++NPSY+PTTLEFEELVKTLARTKKYTTMWKVL QMKTQ
Sbjct: 89  RVLRACSNSGTESFRFFNWACSNNPSYQPTTLEFEELVKTLARTKKYTTMWKVLHQMKTQ 148

Query: 175 NLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHG 234
           NLKISPETISF+I+EYGKQGLVD AVTIFNQCSKSIDCPQTVEVYNALLFALCE+KMFHG
Sbjct: 149 NLKISPETISFVIEEYGKQGLVDGAVTIFNQCSKSIDCPQTVEVYNALLFALCEIKMFHG 208

Query: 235 AYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVE 294
           AYALIRRMIRKGVTPDKKTYG LVTGWCS+GKM+EAQ+FLEEMSQKGFNPPLRGRDLLVE
Sbjct: 209 AYALIRRMIRKGVTPDKKTYGILVTGWCSSGKMKEAQQFLEEMSQKGFNPPLRGRDLLVE 268

Query: 295 GLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCP 354
           GLLNAGYLESAK+MVRKM KEG VPD+GTFNSLINVICNSGEVDFCINI+HEVCKLGLCP
Sbjct: 269 GLLNAGYLESAKNMVRKMIKEGSVPDLGTFNSLINVICNSGEVDFCINIYHEVCKLGLCP 328

Query: 355 DINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFF 414
           DINTYKILIPATSKVGRIDEAFRLL+ C+EDGHIPFPSLYGPI+KGMCK GQFDDAFCFF
Sbjct: 329 DINTYKILIPATSKVGRIDEAFRLLNYCIEDGHIPFPSLYGPIIKGMCKRGQFDDAFCFF 388

Query: 415 SDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNC 474
           SDMK KGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLK+C
Sbjct: 389 SDMKLKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKSC 448

Query: 475 GKHDLAKKIEQLEVSIRG 493
           GKHDLAKKIEQLEVSIRG
Sbjct: 449 GKHDLAKKIEQLEVSIRG 466

[Close]

BLAST of ClCG06G009060 vs. ExPASy Swiss-Prot
Match: Q94JX6 (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g18390 PE=2 SV=2)

HSP 1 Score: 632.1 bits (1629), Expect = 5.3e-180
Identity = 303/436 (69.50%), Postives = 356/436 (81.65%), Query Frame = 0


Query: 58  IRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVFRVL 117
           IRHF++     S    P+K DYFAAI+H+ +IVRR+ + ER+LN L++  + SE VFRVL
Sbjct: 26  IRHFNSLEPLQSSDSTPTKGDYFAAINHVVNIVRREIHPERSLNSLRLP-VTSEFVFRVL 85

Query: 118 RACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLK 177
           RA S S  +S RFFNWA   NPSY PT++E+EEL K+LA  KKY +MWK+L QMK  +L 
Sbjct: 86  RATSRSSNDSLRFFNWA-RSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLD 145

Query: 178 ISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYA 237
           IS ET+ FII++YGK G VD AV +FN   K++ C QTV+VYN+LL ALC+VKMFHGAYA
Sbjct: 146 ISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYA 205

Query: 238 LIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLL 297
           LIRRMIRKG+ PDK+TY  LV GWCSAGKM+EAQEFL+EMS++GFNPP RGRDLL+EGLL
Sbjct: 206 LIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLL 265

Query: 298 NAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDIN 357
           NAGYLESAK+MV KMTK GFVPDI TFN LI  I  SGEV+FCI +++  CKLGLC DI+
Sbjct: 266 NAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDID 325

Query: 358 TYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDM 417
           TYK LIPA SK+G+IDEAFRLL+ C+EDGH PFPSLY PI+KGMC+ G FDDAF FFSDM
Sbjct: 326 TYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 385

Query: 418 KHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKH 477
           K K HPPNRPVYTMLITMCGRGG+FVDAANYL+EM E GL PISRCFDMVTDGLKN GKH
Sbjct: 386 KVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKH 445

Query: 478 DLAKKIEQLEVSIRGI 494
           DLA +IEQLEV +RG+
Sbjct: 446 DLAMRIEQLEVQLRGV 459

[Close]

BLAST of ClCG06G009060 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.8e-40
Identity = 111/407 (27.27%), Postives = 197/407 (48.40%), Query Frame = 0


Query: 75  SKDDYFAAIHHISHIVRRDFY-----MERTLNKLQISYLNSELVFRVLRACSNSGTESFR 134
           SK D FA+    S+ + R F+     +E  LN+  +  L   L+ RVL  C ++G   +R
Sbjct: 74  SKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVE-LRPGLIERVLNRCGDAGNLGYR 133

Query: 135 FFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLK-ISPETISFIIQ 194
           FF WA    P Y  +   ++ +VK L++ +++  +W ++ +M+ +N + I PE    ++Q
Sbjct: 134 FFVWA-AKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQ 193

Query: 195 EYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVT 254
            +    +V  A+ + ++  K    P    V+  LL ALC+      A  L   M R    
Sbjct: 194 RFASADMVKKAIEVLDEMPKFGFEPDEY-VFGCLLDALCKHGSVKDAAKLFEDM-RMRFP 253

Query: 255 PDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDM 314
            + + + +L+ GWC  GKM EA+  L +M++ GF P +     L+ G  NAG +  A D+
Sbjct: 254 VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL 313

Query: 315 VRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSK 374
           +R M + GF P+   +  LI  +C    ++  + +F E+ +     D+ TY  L+    K
Sbjct: 314 LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 373

Query: 375 VGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPV 434
            G+ID+ + +L   ++ G +P    Y  I+    K   F++       M+   + P+  +
Sbjct: 374 WGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI 433

Query: 435 YTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCG 476
           Y ++I +  + G   +A     EM E GL P    F ++ +GL + G
Sbjct: 434 YNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476

[Close]

BLAST of ClCG06G009060 vs. ExPASy Swiss-Prot
Match: Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-38
Identity = 105/413 (25.42%), Postives = 183/413 (44.31%), Query Frame = 0


Query: 112 LVFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQM 171
           LV  VL+   N G ++ +FF++   H+  Y      F+  +   AR   + T+W ++ +M
Sbjct: 58  LVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM 117

Query: 172 KTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKM 231
           ++  +  SP+T + + + Y   G  D AV +F    +   C Q +  +N +L  LC+ K 
Sbjct: 118 RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEH-GCFQDLASFNTILDVLCKSKR 177

Query: 232 FHGAYALIR----------------------------------RMIRKGVTPDKKTYGTL 291
              AY L R                                   M+ +G+ P+  TY T+
Sbjct: 178 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 237

Query: 292 VTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGF 351
           + G+  AG++R A EF  EM ++     +     +V G   AG ++ A+++  +M +EG 
Sbjct: 238 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 297

Query: 352 VPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFR 411
           +P + T+N++I V+C    V+  + +F E+ + G  P++ TY +LI      G       
Sbjct: 298 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 357

Query: 412 LLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPVYTMLIT--- 471
           L+     +G  P    Y  +++   +  + + A   F  M      PN   Y +LI+   
Sbjct: 358 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 417

Query: 472 MCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLE 488
           +  R    V A   L+EM E G  P    F+ V +GL   G    AK+I +L+
Sbjct: 418 VRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQ 469

[Close]

BLAST of ClCG06G009060 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 5.0e-37
Identity = 97/346 (28.03%), Postives = 163/346 (47.11%), Query Frame = 0


Query: 143 PTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQ-----EYGKQGLVD 202
           P  + +  L+    + +K    +K+L  M  + L+  P  IS+ +        G+   V 
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE--PNLISYNVVINGLCREGRMKEVS 297

Query: 203 NAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTL 262
             +T  N+   S+D       YN L+   C+   FH A  +   M+R G+TP   TY +L
Sbjct: 298 FVLTEMNRRGYSLD----EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 357

Query: 263 VTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGF 322
           +   C AG M  A EFL++M  +G  P  R    LV+G    GY+  A  ++R+M   GF
Sbjct: 358 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 417

Query: 323 VPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFR 382
            P + T+N+LIN  C +G+++  I +  ++ + GL PD+ +Y  ++    +   +DEA R
Sbjct: 418 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 477

Query: 383 LLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCG 442
           +    +E G  P    Y  +++G C+  +  +A   + +M   G PP+   YT LI    
Sbjct: 478 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 537

Query: 443 RGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKI 484
             G    A     EM E G+ P    + ++ +GL    +   AK++
Sbjct: 538 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

[Close]

BLAST of ClCG06G009060 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 1.6e-35
Identity = 93/338 (27.51%), Postives = 162/338 (47.93%), Query Frame = 0


Query: 138 NPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVD 197
           N   +P  + +  L++ L    +++   ++L  M  + +  +  T S +I  + K+G + 
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342

Query: 198 NAVTIFNQCSK-SIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGT 257
            A  ++++  K SID    +  Y++L+   C       A  +   MI K   P+  TY T
Sbjct: 343 EAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 402

Query: 258 LVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEG 317
           L+ G+C A ++ E  E   EMSQ+G        + L++GL  AG  + A+ + +KM  +G
Sbjct: 403 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 462

Query: 318 FVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAF 377
             PDI T++ L++ +C  G+++  + +F  + K  + PDI TY I+I    K G++++ +
Sbjct: 463 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 522

Query: 378 RLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMC 437
            L       G  P   +Y  ++ G C+ G  ++A   F +MK  G  PN   Y  LI   
Sbjct: 523 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 582

Query: 438 GRGGRFVDAANYLMEMAEFGL----PPISRCFDMVTDG 471
            R G    +A  + EM   G       IS   +M+ DG
Sbjct: 583 LRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618

[Close]

BLAST of ClCG06G009060 vs. ExPASy TrEMBL
Match: A0A0A0M105 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695420 PE=4 SV=1)

HSP 1 Score: 877.5 bits (2266), Expect = 2.7e-251
Identity = 420/441 (95.24%), Postives = 430/441 (97.51%), Query Frame = 0


Query: 53  KYICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSEL 112
           +YI L RHFS SNS  +GS APSKDDYFAAIHHISHIVRRDFYMERTLNKL+IS LNSEL
Sbjct: 15  RYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSEL 74

Query: 113 VFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMK 172
           VFRVLRACSNSGTESFRFFNWAC+HNPSY+PTTLEFEELVKTLART+KYTTMWKVLLQMK
Sbjct: 75  VFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMK 134

Query: 173 TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF 232
           TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF
Sbjct: 135 TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF 194

Query: 233 HGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLL 292
           HGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKM+EAQEFLEEMSQKGFNPPLRGRDLL
Sbjct: 195 HGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLL 254

Query: 293 VEGLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGL 352
           VEGLLNAGYLESAKDMVRKMTKEG VPDIGTFNSLI+VICNSGEVDFCINIFHEVCKLGL
Sbjct: 255 VEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGL 314

Query: 353 CPDINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFC 412
           CPDINTYKILIPATSKVGRIDEAFRLLHCC+EDGH+PFPSLYGPILKGMCK GQFDDAFC
Sbjct: 315 CPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYGPILKGMCKRGQFDDAFC 374

Query: 413 FFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLK 472
           FF DMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE GLPPISRCFDMVTDGLK
Sbjct: 375 FFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLK 434

Query: 473 NCGKHDLAKKIEQLEVSIRGI 494
           NCGKHDLAKKIEQLEVSIRGI
Sbjct: 435 NCGKHDLAKKIEQLEVSIRGI 455

[Close]

BLAST of ClCG06G009060 vs. ExPASy TrEMBL
Match: A0A5A7V4T7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3607G00300 PE=4 SV=1)

HSP 1 Score: 869.0 bits (2244), Expect = 9.5e-249
Identity = 415/440 (94.32%), Postives = 429/440 (97.50%), Query Frame = 0


Query: 54  YICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELV 113
           YI LIR FS SNSS +GS APSKDDYFAAIHHISHIVRRDFYMERTLNKL+ISYLNSELV
Sbjct: 16  YISLIRCFSNSNSSVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISYLNSELV 75

Query: 114 FRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKT 173
           FRVLRACSN GTESFRFFNWAC+HNPSY+PTTLE EELVKTLART+KYTTMWKVLLQMKT
Sbjct: 76  FRVLRACSNCGTESFRFFNWACSHNPSYQPTTLELEELVKTLARTRKYTTMWKVLLQMKT 135

Query: 174 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 233
           QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH
Sbjct: 136 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 195

Query: 234 GAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLV 293
           GAYALIRRMI+KGVTPDKKTYGTLVTGWCSAGKM+EAQEFLEEMSQKGFNPPLRGRDLLV
Sbjct: 196 GAYALIRRMIKKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLV 255

Query: 294 EGLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLC 353
           EGLLNAGYLESAKDMVRKMTKEG VPDIGTFNSLI+VICNSGEVDFCINIFHEVCKLGLC
Sbjct: 256 EGLLNAGYLESAKDMVRKMTKEGCVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLC 315

Query: 354 PDINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCF 413
           PDINTYKILIPATSKVGRIDEAFRLL+CC+EDGH+PFPSLYGPI+KGMCK GQFDDAFCF
Sbjct: 316 PDINTYKILIPATSKVGRIDEAFRLLNCCIEDGHVPFPSLYGPIIKGMCKRGQFDDAFCF 375

Query: 414 FSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKN 473
           F DMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE GLPPISRCFDMVTDGLK+
Sbjct: 376 FGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLKS 435

Query: 474 CGKHDLAKKIEQLEVSIRGI 494
           CGKHDLAKKIE+LEVSIRGI
Sbjct: 436 CGKHDLAKKIEKLEVSIRGI 455

[Close]

BLAST of ClCG06G009060 vs. ExPASy TrEMBL
Match: A0A1S3CJ74 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501022 PE=4 SV=1)

HSP 1 Score: 869.0 bits (2244), Expect = 9.5e-249
Identity = 415/440 (94.32%), Postives = 429/440 (97.50%), Query Frame = 0


Query: 54  YICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELV 113
           YI LIR FS SNSS +GS APSKDDYFAAIHHISHIVRRDFYMERTLNKL+ISYLNSELV
Sbjct: 16  YISLIRCFSNSNSSVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISYLNSELV 75

Query: 114 FRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKT 173
           FRVLRACSN GTESFRFFNWAC+HNPSY+PTTLE EELVKTLART+KYTTMWKVLLQMKT
Sbjct: 76  FRVLRACSNCGTESFRFFNWACSHNPSYQPTTLELEELVKTLARTRKYTTMWKVLLQMKT 135

Query: 174 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 233
           QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH
Sbjct: 136 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 195

Query: 234 GAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLV 293
           GAYALIRRMI+KGVTPDKKTYGTLVTGWCSAGKM+EAQEFLEEMSQKGFNPPLRGRDLLV
Sbjct: 196 GAYALIRRMIKKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLV 255

Query: 294 EGLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLC 353
           EGLLNAGYLESAKDMVRKMTKEG VPDIGTFNSLI+VICNSGEVDFCINIFHEVCKLGLC
Sbjct: 256 EGLLNAGYLESAKDMVRKMTKEGCVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLC 315

Query: 354 PDINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCF 413
           PDINTYKILIPATSKVGRIDEAFRLL+CC+EDGH+PFPSLYGPI+KGMCK GQFDDAFCF
Sbjct: 316 PDINTYKILIPATSKVGRIDEAFRLLNCCIEDGHVPFPSLYGPIIKGMCKRGQFDDAFCF 375

Query: 414 FSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKN 473
           F DMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE GLPPISRCFDMVTDGLK+
Sbjct: 376 FGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLKS 435

Query: 474 CGKHDLAKKIEQLEVSIRGI 494
           CGKHDLAKKIE+LEVSIRGI
Sbjct: 436 CGKHDLAKKIEKLEVSIRGI 455

[Close]

BLAST of ClCG06G009060 vs. ExPASy TrEMBL
Match: A0A6J1JC50 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111485446 PE=4 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 7.0e-244
Identity = 407/438 (92.92%), Postives = 427/438 (97.49%), Query Frame = 0


Query: 55  ICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVF 114
           I LIRHFSTSNSS +GS  PSKDDYFAAIHHIS+IVRRD YMERTLNKL+ISYLNSELVF
Sbjct: 29  IFLIRHFSTSNSSSNGSGTPSKDDYFAAIHHISNIVRRDIYMERTLNKLRISYLNSELVF 88

Query: 115 RVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQ 174
           RVLRACSNSGTESFRFFNWAC++NPSY+PTTLEFEELVKTLARTKKYTTMWKVL QMKTQ
Sbjct: 89  RVLRACSNSGTESFRFFNWACSNNPSYQPTTLEFEELVKTLARTKKYTTMWKVLHQMKTQ 148

Query: 175 NLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHG 234
           NLKISPETISF+I+EYGKQGLVD AVTIFNQCSKSIDCPQTVEVYNALLFALCE+KMFHG
Sbjct: 149 NLKISPETISFVIEEYGKQGLVDGAVTIFNQCSKSIDCPQTVEVYNALLFALCEIKMFHG 208

Query: 235 AYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVE 294
           AYALIRRMIRKGVTPDKKTYG LVTGWCS+GKM+EAQ+FLEEMSQKGFNPPLRGRDLLVE
Sbjct: 209 AYALIRRMIRKGVTPDKKTYGILVTGWCSSGKMKEAQQFLEEMSQKGFNPPLRGRDLLVE 268

Query: 295 GLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCP 354
           GLLNAGYLESAK+MVRKMTKEG VPD+GTFNSLINVIC+SGEVDFCINI+HEVCKLGLCP
Sbjct: 269 GLLNAGYLESAKNMVRKMTKEGSVPDLGTFNSLINVICDSGEVDFCINIYHEVCKLGLCP 328

Query: 355 DINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFF 414
           DINTYKILIPATSKVGRIDEAFRLL+ C+EDGHIPFPSLYGPI+KGMCK GQFDDAFCFF
Sbjct: 329 DINTYKILIPATSKVGRIDEAFRLLNYCIEDGHIPFPSLYGPIIKGMCKRGQFDDAFCFF 388

Query: 415 SDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNC 474
           SDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLK+C
Sbjct: 389 SDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKSC 448

Query: 475 GKHDLAKKIEQLEVSIRG 493
           GKHDLAKKIEQLEVSIRG
Sbjct: 449 GKHDLAKKIEQLEVSIRG 466

[Close]

BLAST of ClCG06G009060 vs. ExPASy TrEMBL
Match: A0A6J1H8G8 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111461504 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.7e-242
Identity = 406/438 (92.69%), Postives = 425/438 (97.03%), Query Frame = 0


Query: 55  ICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVF 114
           I LIRHFSTSNSS +GS  PSKDDYFAAIHHIS+IVRRD YMERTLNKL+ISYLNSELVF
Sbjct: 29  IFLIRHFSTSNSSSNGSGTPSKDDYFAAIHHISNIVRRDIYMERTLNKLRISYLNSELVF 88

Query: 115 RVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQ 174
           RVLRACSNSGTESFRFFNWAC++NPSY+PTTLEFEELVKTLARTKKYTTMWKVL QMKTQ
Sbjct: 89  RVLRACSNSGTESFRFFNWACSNNPSYQPTTLEFEELVKTLARTKKYTTMWKVLHQMKTQ 148

Query: 175 NLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHG 234
           NLKISPETISF+I+EYGKQGLVD AVTIFNQCSKSIDCPQTVEVYNALLFALCE+KMFHG
Sbjct: 149 NLKISPETISFVIEEYGKQGLVDGAVTIFNQCSKSIDCPQTVEVYNALLFALCEIKMFHG 208

Query: 235 AYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVE 294
           AYALIRRMIRKGVTPDKKTYG LVTGWCS+GKM+EAQ+FLEEMSQKGFNPPLRGRDLLVE
Sbjct: 209 AYALIRRMIRKGVTPDKKTYGILVTGWCSSGKMKEAQQFLEEMSQKGFNPPLRGRDLLVE 268

Query: 295 GLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCP 354
           GLLNAGYLESAK+MVRKM KEG VPD+GTFNSLINVICNSGEVDFCINI+HEVCKLGLCP
Sbjct: 269 GLLNAGYLESAKNMVRKMIKEGSVPDLGTFNSLINVICNSGEVDFCINIYHEVCKLGLCP 328

Query: 355 DINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFF 414
           DINTYKILIPATSKVGRIDEAFRLL+ C+EDGHIPFPSLYGPI+KGMCK GQFDDAFCFF
Sbjct: 329 DINTYKILIPATSKVGRIDEAFRLLNYCIEDGHIPFPSLYGPIIKGMCKRGQFDDAFCFF 388

Query: 415 SDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNC 474
           SDMK KGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLK+C
Sbjct: 389 SDMKLKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKSC 448

Query: 475 GKHDLAKKIEQLEVSIRG 493
           GKHDLAKKIEQLEVSIRG
Sbjct: 449 GKHDLAKKIEQLEVSIRG 466

[Close]

BLAST of ClCG06G009060 vs. TAIR 10
Match: AT5G18390.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 632.1 bits (1629), Expect = 3.7e-181
Identity = 303/436 (69.50%), Postives = 356/436 (81.65%), Query Frame = 0


Query: 58  IRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVFRVL 117
           IRHF++     S    P+K DYFAAI+H+ +IVRR+ + ER+LN L++  + SE VFRVL
Sbjct: 26  IRHFNSLEPLQSSDSTPTKGDYFAAINHVVNIVRREIHPERSLNSLRLP-VTSEFVFRVL 85

Query: 118 RACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLK 177
           RA S S  +S RFFNWA   NPSY PT++E+EEL K+LA  KKY +MWK+L QMK  +L 
Sbjct: 86  RATSRSSNDSLRFFNWA-RSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLD 145

Query: 178 ISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYA 237
           IS ET+ FII++YGK G VD AV +FN   K++ C QTV+VYN+LL ALC+VKMFHGAYA
Sbjct: 146 ISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYA 205

Query: 238 LIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLL 297
           LIRRMIRKG+ PDK+TY  LV GWCSAGKM+EAQEFL+EMS++GFNPP RGRDLL+EGLL
Sbjct: 206 LIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLL 265

Query: 298 NAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDIN 357
           NAGYLESAK+MV KMTK GFVPDI TFN LI  I  SGEV+FCI +++  CKLGLC DI+
Sbjct: 266 NAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDID 325

Query: 358 TYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDM 417
           TYK LIPA SK+G+IDEAFRLL+ C+EDGH PFPSLY PI+KGMC+ G FDDAF FFSDM
Sbjct: 326 TYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 385

Query: 418 KHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKH 477
           K K HPPNRPVYTMLITMCGRGG+FVDAANYL+EM E GL PISRCFDMVTDGLKN GKH
Sbjct: 386 KVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKH 445

Query: 478 DLAKKIEQLEVSIRGI 494
           DLA +IEQLEV +RG+
Sbjct: 446 DLAMRIEQLEVQLRGV 459

[Close]

BLAST of ClCG06G009060 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 167.2 bits (422), Expect = 3.4e-41
Identity = 111/407 (27.27%), Postives = 197/407 (48.40%), Query Frame = 0


Query: 75  SKDDYFAAIHHISHIVRRDFY-----MERTLNKLQISYLNSELVFRVLRACSNSGTESFR 134
           SK D FA+    S+ + R F+     +E  LN+  +  L   L+ RVL  C ++G   +R
Sbjct: 74  SKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVE-LRPGLIERVLNRCGDAGNLGYR 133

Query: 135 FFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLK-ISPETISFIIQ 194
           FF WA    P Y  +   ++ +VK L++ +++  +W ++ +M+ +N + I PE    ++Q
Sbjct: 134 FFVWA-AKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQ 193

Query: 195 EYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVT 254
            +    +V  A+ + ++  K    P    V+  LL ALC+      A  L   M R    
Sbjct: 194 RFASADMVKKAIEVLDEMPKFGFEPDEY-VFGCLLDALCKHGSVKDAAKLFEDM-RMRFP 253

Query: 255 PDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDM 314
            + + + +L+ GWC  GKM EA+  L +M++ GF P +     L+ G  NAG +  A D+
Sbjct: 254 VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL 313

Query: 315 VRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSK 374
           +R M + GF P+   +  LI  +C    ++  + +F E+ +     D+ TY  L+    K
Sbjct: 314 LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 373

Query: 375 VGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPV 434
            G+ID+ + +L   ++ G +P    Y  I+    K   F++       M+   + P+  +
Sbjct: 374 WGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI 433

Query: 435 YTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCG 476
           Y ++I +  + G   +A     EM E GL P    F ++ +GL + G
Sbjct: 434 YNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476

[Close]

BLAST of ClCG06G009060 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 157.1 bits (396), Expect = 3.5e-38
Identity = 97/346 (28.03%), Postives = 163/346 (47.11%), Query Frame = 0


Query: 143 PTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQ-----EYGKQGLVD 202
           P  + +  L+    + +K    +K+L  M  + L+  P  IS+ +        G+   V 
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE--PNLISYNVVINGLCREGRMKEVS 297

Query: 203 NAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTL 262
             +T  N+   S+D       YN L+   C+   FH A  +   M+R G+TP   TY +L
Sbjct: 298 FVLTEMNRRGYSLD----EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 357

Query: 263 VTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGF 322
           +   C AG M  A EFL++M  +G  P  R    LV+G    GY+  A  ++R+M   GF
Sbjct: 358 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 417

Query: 323 VPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFR 382
            P + T+N+LIN  C +G+++  I +  ++ + GL PD+ +Y  ++    +   +DEA R
Sbjct: 418 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 477

Query: 383 LLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCG 442
           +    +E G  P    Y  +++G C+  +  +A   + +M   G PP+   YT LI    
Sbjct: 478 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 537

Query: 443 RGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKI 484
             G    A     EM E G+ P    + ++ +GL    +   AK++
Sbjct: 538 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

[Close]

BLAST of ClCG06G009060 vs. TAIR 10
Match: AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 152.9 bits (385), Expect = 6.7e-37
Identity = 85/322 (26.40%), Postives = 157/322 (48.76%), Query Frame = 0


Query: 112 LVFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQM 171
           LV  VL+   N G ++ +FF++   H+  Y      F+  +   AR   + T+W ++ +M
Sbjct: 58  LVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM 117

Query: 172 KTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKM 231
           ++  +  SP+T + + + Y   G  D AV +F    +   C Q +  +N +L  LC+ K 
Sbjct: 118 RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEH-GCFQDLASFNTILDVLCKSKR 177

Query: 232 FHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDL 291
              AY L  R +R   + D  TY  ++ GWC   +  +A E L+EM ++G NP L   + 
Sbjct: 178 VEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 237

Query: 292 LVEGLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLG 351
           +++G   AG +  A +   +M K     D+ T+ ++++    +GE+    N+F E+ + G
Sbjct: 238 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 297

Query: 352 LCPDINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAF 411
           + P + TY  +I    K   ++ A  +    +  G+ P  + Y  +++G+   G+F    
Sbjct: 298 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 357

Query: 412 CFFSDMKHKGHPPNRPVYTMLI 434
                M+++G  PN   Y M+I
Sbjct: 358 ELMQRMENEGCEPNFQTYNMMI 377

[Close]

BLAST of ClCG06G009060 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 1.1e-36
Identity = 93/338 (27.51%), Postives = 162/338 (47.93%), Query Frame = 0


Query: 138 NPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVD 197
           N   +P  + +  L++ L    +++   ++L  M  + +  +  T S +I  + K+G + 
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342

Query: 198 NAVTIFNQCSK-SIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGT 257
            A  ++++  K SID    +  Y++L+   C       A  +   MI K   P+  TY T
Sbjct: 343 EAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 402

Query: 258 LVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEG 317
           L+ G+C A ++ E  E   EMSQ+G        + L++GL  AG  + A+ + +KM  +G
Sbjct: 403 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 462

Query: 318 FVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAF 377
             PDI T++ L++ +C  G+++  + +F  + K  + PDI TY I+I    K G++++ +
Sbjct: 463 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 522

Query: 378 RLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMC 437
            L       G  P   +Y  ++ G C+ G  ++A   F +MK  G  PN   Y  LI   
Sbjct: 523 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 582

Query: 438 GRGGRFVDAANYLMEMAEFGL----PPISRCFDMVTDG 471
            R G    +A  + EM   G       IS   +M+ DG
Sbjct: 583 LRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618

The following BLAST results are available for this feature:

BLAST of ClCG06G009060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879743.1	6.1e-258	90.83	pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Benincasa ...	[more]
XP_004142520.1	5.5e-251	95.24	pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis sa...	[more]
XP_008462724.1	2.0e-248	94.32	PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial ...	[more]
XP_022988097.1	1.4e-243	92.92	pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita ...	[more]
XP_022960812.1	3.6e-242	92.69	pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita ...	[more]

BLAST of ClCG06G009060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX6	5.3e-180	69.50	Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidop...	[more]
Q9FH87	4.8e-40	27.27	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
Q9S7R4	1.2e-38	25.42	Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop...	[more]
Q9FIX3	5.0e-37	28.03	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LQ14	1.6e-35	27.51	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]

BLAST of ClCG06G009060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M105	2.7e-251	95.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695420 PE=4 SV=1	[more]
A0A5A7V4T7	9.5e-249	94.32	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CJ74	9.5e-249	94.32	pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucumis ...	[more]
A0A6J1JC50	7.0e-244	92.92	pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucurbit...	[more]
A0A6J1H8G8	1.7e-242	92.69	pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucurbit...	[more]

BLAST of ClCG06G009060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18390.1	3.7e-181	69.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G65820.1	3.4e-41	27.27	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	3.5e-38	28.03	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74900.1	6.7e-37	26.40	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62930.1	1.1e-36	27.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 115..288 e-value: 2.3E-28 score: 101.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 290..367 e-value: 5.1E-16 score: 60.5 coord: 368..488 e-value: 1.6E-19 score: 72.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 394..425 e-value: 3.3E-7 score: 28.1 coord: 428..459 e-value: 3.9E-4 score: 18.4 coord: 292..321 e-value: 3.3E-4 score: 18.6 coord: 218..250 e-value: 4.0E-6 score: 24.7 coord: 253..284 e-value: 1.4E-4 score: 19.8 coord: 323..356 e-value: 6.0E-5 score: 20.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 245..278 e-value: 2.1E-10 score: 40.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 319..365 e-value: 3.5E-8 score: 33.5 coord: 396..436 e-value: 2.8E-9 score: 37.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 292..317 e-value: 0.56 score: 10.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 355..389 score: 9.602157
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 320..354 score: 10.205028
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 390..424 score: 10.588674
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 425..459 score: 10.073492
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 215..249 score: 10.840783
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 250..284 score: 12.693243
None	No IPR available	GENE3D	3.30.70.3370		coord: 14..69 e-value: 7.3E-9 score: 37.3
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 54..492
None	No IPR available	PANTHER	PTHR45613:SF30	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 54..492
IPR001976	Ribosomal protein S24e	PFAM	PF01282	Ribosomal_S24e	coord: 22..56 e-value: 1.0E-8 score: 35.0
IPR012678	Ribosomal protein L23/L15e core domain superfamily	SUPERFAMILY	54189	Ribosomal proteins S24e, L23 and L15e	coord: 13..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G009060.1	ClCG06G009060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003735	structural constituent of ribosome