ClCG06G008995 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G008995
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	TF-B3 domain-containing protein
Location	CG_Chr06: 13773382 .. 13776177 (+)
RNA-Seq Expression	ClCG06G008995
Synteny	ClCG06G008995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAGGTACGTTACACGTACAATAACAAGATAGTTGAGAAGGATGTGTACGAAACAGCTTTGATTATTTGTGACATAAAGAGTAAAAGCATGGAACCATTTGAGTTGATGGAGTTGATGCGGCGTTTGAAAACTCGATTTCCAGGTTCAACTTCCACTACTTCTATAGGAAATGAGCAACCACCTGTAATCAACAACAATCAAAATGTGGCAGCGGTGCTTGGTGGGGCTGGGGATAGAATTCTTCGGCTACTACCTGGTGGAGCTTTGGATAGACTTCCGCCGGTGGCGGTGATCAGAAACGTAATTGGAGTGTGTAGTCGGGCGTTTGTGAAGCAATTAACAAAAAGCGATTTGACAGATGGGTTAGGGAGATTGGCACTTCATAAGGAATTTGTGAATCGTGATTTGGTTCCAATGTTCAATGATAATGAGGATTTGGTTGAGGGAATTGATGTTATAGCTTTTGATAGTGAAGGGAGGCAATACGACATGACGTTCAAGCTTTGGACTTCTAAGCTTTACGTGCTCACCAAAAGTTGGAAGGAGTTTTACAAGACCAATAATTTGACACAATCTGGTGAGTACGTCACTGTTTGGATGTTTCGACATGTCGTCAATCACAATCTTTGCTTTGCTATTATTCAAGGAAGGTTTGAACGACCTTGAGCTTCGGGGTAACGTGCCTCCATTATTGCGTCCTCTCCAAATGGACTACGTTTTATCATTACCACATTATACTTTTTTTTTTTTTTTTTAAATTATTATTATTATTTATTACTATTCTTTTAGAATTAGTGAAATAAGGGAGATATTGTTTGTCCCATATAGTTCTTTACTTTAGTTACATATCAATAAAATTTGCGTATTCGCAGTTCCTTCTTTCCATGCTTTTTTTTTTTTTTCTCATAATGTGATTGTGTATTTAGTTTTAGTTTTATTTTTAAAAAATTATTATAAATACAAAAAATATCAAACTATTTACAAATATAGGAATATTTCATTAAACTCACAATATTCAATTCTCACAATACAATAAAAGAATAGATGTACAAATTTGAACTCACAATATTCAATCCTCACAATACAATAAAAGTGTCTCTCTAGAATAAGATGAAAAGAAAGAAATTTGAGAGCTTGGAGACAAAGCAACAATGATGGTCTGTTTCAATTTTTGAGGATTGTAAAGTTGAAAAAGTTGGAAAAACTTTTTAAAGACGATGAAGTTTAAAAAGGGAGAGAAGTAGGGTAAAAGTTAGATTTTAATTTGGGTCATTGGATTGATCAAAAAGTAAAACAAAAGGTGGAGATTAAAAGTAAATTTTTTATTTTTTTATTTTTTATTATTAGTTTAAAGATAACTAGTCGTTAGACACAAACATAAAATAATATTAAATTTATTTTCTTTCTAAATTTTTTTTTAAAAATTGATGCGCACTTTTAGTGTTAACCGCAAGTGTACGGGTCAAGTTATAATATAAGACGGTTAAGTCCGAATATCGTTCTACTGGAGATCCAATTGTGAAGGTTTAAGTTACTTAGCTATTCTAGAGTTGAATCAATTTTATTTGAGGATTTGAATTGAAATCGTTAATTATGGAAAATATAAAATAAATACGGAAAGTATTAAAGTGAGAAACACAAGACTCAAAGAGAGTTATAGGGTAATGAATCTTTGTTTATTTCATCATGCAATATTATAGATTTCATGGATTTTATTGTCATTCATATGCCTAAGTCTAGAAACTTAATTCCAAGTTATTTTCTCTCAAAAACAACCATTTCTCATGCAACTCGATTGATTATTAATCTCTTAAAACCAATACAAAATTACATGGCATTAAGAATAGTCTTTAGCACCTTTTATTGTCAACCTAATTACTCTCGTGATAGAGTAACAACAATTCATTGTTATAGATCAAGTTAAACATACAGTCTCTCAATATAGATCTAACCTAACATGTGAGGATGGTCAATCCACAAGAGGTAAACAAAATAACAATGAAAAGCATAATCCTTCCAACAAAACCATGAAAGTCTACAAGATCAACATAAATTCATAAACAAATCATCAAAACCCTAATACTAAAGAGTTTTGCCACTCATAGCTTGCAGCAACATGTTTAAGCAAAATAAACAAAGAAAGAGTGTAAAGAAAGGGAAACTCTCCTGAAAAGAGGCTCTTGATTGAGGTAACACTGTAACGATCTCCTTGGCTCTCACGTTGGAATTCGAAGGGCACCAAGACTATCTCGAACTCTTTTCCTCTTCCTTGCAACTAACTCACTCTTTGAACTCTCACTTAATTCTCTTCTTTTTGTGCTTCTTTAGGTCTGTAACTTCATTGCTTTGCTTTGATTTTCTTTGATGATTTGAGCTGCTGGAAACCCCCAAATTTATAGAGTTTGGCCGCCCAAAAATTTACCAAAAATAACAATTTTTCATTTAAGGAAAGCTGGCGCCGCGGCGCTTGGGCTGCATCAGAAAAGTTTGCTCTCGGGTTTTAGCGTCGTGGCAGCACCGTCCAAGCGCCGCGACGCTGTCATGCGTTCAACAAGGTTGCGTTGAAGCAGCGCCATCTCAGCGATGCGGTGCTACTATGCGTCCAGAACGATGCGTTTATGTTTCAGCGCCGTCTCAGCGCCGCGGTGCTACTATGCGTCCATAACGATGCGTTTATGTTTTAGCGTCGCGGCAGCGCCGTCTTGGCGCCGCGGCGTTATCCCAAAATTCGCCCTTTTGAGTTTTTCAGCTCTTTTTCGCCGTATTCTTGCTCGGTTTTTTATCTTTTAG

mRNA sequence

ATGGTTAAGGTACGTTACACGTACAATAACAAGATAGTTGAGAAGGATGTGTACGAAACAGCTTTGATTATTTGTGACATAAAGAGTAAAAGCATGGAACCATTTGAGTTGATGGAGTTGATGCGGCGTTTGAAAACTCGATTTCCAGGTTCAACTTCCACTACTTCTATAGGAAATGAGCAACCACCTGTAATCAACAACAATCAAAATGTGGCAGCGGTGCTTGGTGGGGCTGGGGATAGAATTCTTCGGCTACTACCTGGTGGAGCTTTGGATAGACTTCCGCCGGTGGCGGTGATCAGAAACGTAATTGGAGTGTGTAGTCGGGCGTTTGTGAAGCAATTAACAAAAAGCGATTTGACAGATGGGTTAGGGAGATTGGCACTTCATAAGGAATTTGTGAATCGTGATTTGGTTCCAATGTTCAATGATAATGAGGATTTGGTTGAGGGAATTGATGTTATAGCTTTTGATAGTGAAGGGAGGCAATACGACATGACGTTCAAGCTTTGGACTTCTAAGCTTTACGTGCTCACCAAAAGTTGGAAGGAGTTTTACAAGACCAATAATTTGACACAATCTGGTGAGTACGTCACTGTTTGGATGTTTCGACATGTCGTCAATCACAATCTTTGCTTTGCTATTATTCAAGGAAGGAAAGCTGGCGCCGCGGCGCTTGGGCTGCATCAGAAAAGTTTGCTCTCGGGTTTTAGCGTCGTGGCAGCACCGTCCAAGCGCCGCGACGCTGTCATGCGTTCAACAAGCGCCGTCTCAGCGCCGCGGTGCTACTATGCGTCCATAACGATGCGTTTATGTTTTAGCGTCGCGGCAGCGCCGTCTTGGCGCCGCGGCGTTATCCCAAAATTCGCCCTTTTGAGTTTTTCAGCTCTTTTTCGCCGTATTCTTGCTCGGTTTTTTATCTTTTAG

Coding sequence (CDS)

ATGGTTAAGGTACGTTACACGTACAATAACAAGATAGTTGAGAAGGATGTGTACGAAACAGCTTTGATTATTTGTGACATAAAGAGTAAAAGCATGGAACCATTTGAGTTGATGGAGTTGATGCGGCGTTTGAAAACTCGATTTCCAGGTTCAACTTCCACTACTTCTATAGGAAATGAGCAACCACCTGTAATCAACAACAATCAAAATGTGGCAGCGGTGCTTGGTGGGGCTGGGGATAGAATTCTTCGGCTACTACCTGGTGGAGCTTTGGATAGACTTCCGCCGGTGGCGGTGATCAGAAACGTAATTGGAGTGTGTAGTCGGGCGTTTGTGAAGCAATTAACAAAAAGCGATTTGACAGATGGGTTAGGGAGATTGGCACTTCATAAGGAATTTGTGAATCGTGATTTGGTTCCAATGTTCAATGATAATGAGGATTTGGTTGAGGGAATTGATGTTATAGCTTTTGATAGTGAAGGGAGGCAATACGACATGACGTTCAAGCTTTGGACTTCTAAGCTTTACGTGCTCACCAAAAGTTGGAAGGAGTTTTACAAGACCAATAATTTGACACAATCTGGTGAGTACGTCACTGTTTGGATGTTTCGACATGTCGTCAATCACAATCTTTGCTTTGCTATTATTCAAGGAAGGAAAGCTGGCGCCGCGGCGCTTGGGCTGCATCAGAAAAGTTTGCTCTCGGGTTTTAGCGTCGTGGCAGCACCGTCCAAGCGCCGCGACGCTGTCATGCGTTCAACAAGCGCCGTCTCAGCGCCGCGGTGCTACTATGCGTCCATAACGATGCGTTTATGTTTTAGCGTCGCGGCAGCGCCGTCTTGGCGCCGCGGCGTTATCCCAAAATTCGCCCTTTTGAGTTTTTCAGCTCTTTTTCGCCGTATTCTTGCTCGGTTTTTTATCTTTTAG

Protein sequence

MVKVRYTYNNKIVEKDVYETALIICDIKSKSMEPFELMELMRRLKTRFPGSTSTTSIGNEQPPVINNNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGRKAGAAALGLHQKSLLSGFSVVAAPSKRRDAVMRSTSAVSAPRCYYASITMRLCFSVAAAPSWRRGVIPKFALLSFSALFRRILARFFIF

Homology

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BLAST of ClCG06G008995 vs. NCBI nr
Match: KAA0043114.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 2.4e-63
Identity = 137/244 (56.15%), Postives = 166/244 (68.03%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKDVYETALIICDIKSKSMEPFELMELMRRLKTRFPGSTSTTSIG-- 60
           MVKV Y YNNKIV+K+VYE  L +C++K KS EPFE          +FP STS + +   
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEMK-KSSEPFE-------EPNQFPSSTSISMVDDQ 60

Query: 61  ----NEQPPVI----------------NNNQNVAAVLGGAGDRILRLLPGGALDRLPPVA 120
               NEQPP++                NNN+NVAAV+    DR         L RLPP+A
Sbjct: 61  PPVVNEQPPIVNEHAPVVNEALLNNNNNNNENVAAVV---ADR--------DLGRLPPMA 120

Query: 121 VIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFD 180
           VI+N+IG CS  FVKQLTK+D+TD  GRLALHKEFVNR+LVPMFN +E L  GI V  +D
Sbjct: 121 VIQNIIGECSPPFVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYD 180

Query: 181 SEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQG 223
           SEGR+YDMTF+LWTSKLYVLTKSWK+FY  N LT+  E++T+WMFRHVVNH LCFAI++G
Sbjct: 181 SEGREYDMTFRLWTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRG 225

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BLAST of ClCG06G008995 vs. NCBI nr
Match: XP_031736688.1 (uncharacterized protein LOC116402065 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 2.7e-62
Identity = 131/232 (56.47%), Postives = 164/232 (70.69%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKDVYETALIICDIK-SKSMEPFELMELMRRLKTRFPGSTSTTSIGN 60
           MVKVRYTYNNKIVEK VYE +L +C +K S+ ++PFE  + + RL  RF  STS  SI N
Sbjct: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFE--KPVTRLNNRFSSSTS-ISILN 60

Query: 61  EQPPVI-------------NNNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRNVIGV 120
           +QPP++             NNN+NVA  + G               R+PP+AVI+N+IG 
Sbjct: 61  KQPPILIERAPIVNEALPNNNNENVAVAVAGRD-----------WGRVPPMAVIQNIIGE 120

Query: 121 CSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDM 180
           CS  FVKQL K+D+T+  GRLALHKEFV R+L+PMFN  E+L  GI V  +DSEGR+YDM
Sbjct: 121 CSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDM 180

Query: 181 TFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQG 219
            FK WTSKLYVLTKSW +FYK+NNLT+ GE+++VWMFRHVVN  LCFAI++G
Sbjct: 181 IFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRG 218

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BLAST of ClCG06G008995 vs. NCBI nr
Match: KGN56101.1 (hypothetical protein Csa_010492 [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-61
Identity = 134/238 (56.30%), Postives = 167/238 (70.17%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKDVYETALIICDIK-SKSMEPFELMELMRRLKTRFPGSTSTTSIGN 60
           MV V YTYNNKIV +DVY+ +LI+ D+  SKS+EPFE  E + R   +   S+++TS+ N
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFE--EPIDRFNNQL--SSTSTSLVN 60

Query: 61  EQPPVIN------------------NNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIR 120
           EQ PV+N                  NN+NVAA           ++ G    R PP+AVI+
Sbjct: 61  EQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAA----------VVVGRDQGRFPPMAVIQ 120

Query: 121 NVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEG 180
           N+IG CS  FVKQLTK+D+TD  GRLALHKEFVN +L PMFND+EDL +GI VI +D EG
Sbjct: 121 NIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEG 180

Query: 181 RQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGR 220
           R+YDM FKLW SKLYVLTKSWKEFYKTN+LTQ GE+++VWMFRHVV   LCFAI++G+
Sbjct: 181 REYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQ 224

[Close]

BLAST of ClCG06G008995 vs. NCBI nr
Match: KAG6589940.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.1 bits (497), Expect = 4.6e-46
Identity = 104/219 (47.49%), Postives = 138/219 (63.01%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKDVYETALIICDIKSKSMEPFELMELMRRLKTRFPGSTSTTSIGNE 60
           MV+V Y +NN+I+EKDVYETA I   + +    P    E       +  GSTS       
Sbjct: 1   MVRVHYRHNNRIIEKDVYETARIFHCLCTGEQFP----EPSYSSDEQVSGSTSGDMDDEN 60

Query: 61  QPPVINNNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRNVIGVCSRAFVKQLTKSDL 120
           + P IN +++VA  +    + +  ++       +P +AVI N+IG  S  + K+LTKSD+
Sbjct: 61  EAPSINGDEDVALEVEEVAEVVAPVV-------IPALAVIMNIIGARSPPWEKRLTKSDV 120

Query: 121 TDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTFKLWTSKLYVLTK 180
           ++G GRL + KEFV   L+PMFN +ED  EGIDV  ++ EGRQYDM FKLW SKLYVLTK
Sbjct: 121 SEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTK 180

Query: 181 SWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGR 220
            W +FYKTNNLT  G YVT+WMFRHV  H +CFA+  G+
Sbjct: 181 GWNDFYKTNNLTDPGLYVTLWMFRHVETHKICFAVTAGQ 208

[Close]

BLAST of ClCG06G008995 vs. NCBI nr
Match: KAG7023605.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170.2 bits (430), Expect = 2.7e-38
Identity = 82/159 (51.57%), Postives = 110/159 (69.18%), Query Frame = 0


Query: 61  QPPVINNNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRNVIGVCSRAFVKQLTKSDL 120
           + P IN +++VA  +    + +  ++       +P +AVI N+IG  S  + K+LTKSD+
Sbjct: 6   EAPSINGDEDVALEVEEVAEVVAPVV-------IPALAVIMNIIGARSPPWEKRLTKSDV 65

Query: 121 TDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTFKLWTSKLYVLTK 180
           ++G GRL + KEFV   L+PMFN +ED  EGIDV  ++ EGRQYDM FKLW SKLYVLTK
Sbjct: 66  SEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTK 125

Query: 181 SWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGR 220
            W +FYKTNNLT+ G YVT+WMFRHV  H +CFA+  G+
Sbjct: 126 GWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQ 157

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BLAST of ClCG06G008995 vs. ExPASy Swiss-Prot
Match: Q9ZR14 (Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 GN=At4g03170 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-17
Identity = 46/109 (42.20%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 108 SRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMT 167
           SR   KQL  SD+      L L KE V   ++P   D+E+ V+GIDV  +  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 168 FKLWT-SKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAI 216
           FK+W   K  VLT  WK+F +   L+ + ++VTVWMFRH+    LCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of ClCG06G008995 vs. ExPASy Swiss-Prot
Match: Q9ZR15 (Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 GN=At4g03160 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-11
Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 109 RAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTF 168
           R   +QL  SD+ D   RL L KE V + +  +    +   +G++V  +   G  + M  
Sbjct: 63  RKVAEQLMDSDVKDNQYRLMLGKEPVKKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVL 122

Query: 169 KLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAI 216
           K+W     VLT  WK F K+  L +  +++T+WMFRH     +CFAI
Sbjct: 123 KIWIKGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of ClCG06G008995 vs. ExPASy Swiss-Prot
Match: Q9LM90 (B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20600 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.2e-10
Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = 0


Query: 61  QPPVINNNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRN--VIGVCSRAFVKQLTKS 120
           QP  + N   +   +    +  LRL+       L P  +  +  V    SR   KQL  S
Sbjct: 73  QPKRVKNQNIMKINIHDFSEETLRLIEDWYNAELDPQDIFGDDEVTRRFSRPIKKQLMSS 132

Query: 121 DLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTFKLWT-SKLYV 180
           D+     RL L KE V   ++P   ++ED V+G+DV  +  +G    M FK+W   K  V
Sbjct: 133 DVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMKFKMWNGDKTPV 192

Query: 181 LTKSWKEFYKTNNLTQSGEYVT 200
           LT  W +F     L ++ ++VT
Sbjct: 193 LTSGWMQFVADYGLLKTSDFVT 214

[Close]

BLAST of ClCG06G008995 vs. ExPASy TrEMBL
Match: A0A5D3BAS8 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00040 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 137/244 (56.15%), Postives = 166/244 (68.03%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKDVYETALIICDIKSKSMEPFELMELMRRLKTRFPGSTSTTSIG-- 60
           MVKV Y YNNKIV+K+VYE  L +C++K KS EPFE          +FP STS + +   
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEMK-KSSEPFE-------EPNQFPSSTSISMVDDQ 60

Query: 61  ----NEQPPVI----------------NNNQNVAAVLGGAGDRILRLLPGGALDRLPPVA 120
               NEQPP++                NNN+NVAAV+    DR         L RLPP+A
Sbjct: 61  PPVVNEQPPIVNEHAPVVNEALLNNNNNNNENVAAVV---ADR--------DLGRLPPMA 120

Query: 121 VIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFD 180
           VI+N+IG CS  FVKQLTK+D+TD  GRLALHKEFVNR+LVPMFN +E L  GI V  +D
Sbjct: 121 VIQNIIGECSPPFVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYD 180

Query: 181 SEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQG 223
           SEGR+YDMTF+LWTSKLYVLTKSWK+FY  N LT+  E++T+WMFRHVVNH LCFAI++G
Sbjct: 181 SEGREYDMTFRLWTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRG 225

[Close]

BLAST of ClCG06G008995 vs. ExPASy TrEMBL
Match: A0A0A0L7L0 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 6.4e-62
Identity = 134/238 (56.30%), Postives = 167/238 (70.17%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKDVYETALIICDIK-SKSMEPFELMELMRRLKTRFPGSTSTTSIGN 60
           MV V YTYNNKIV +DVY+ +LI+ D+  SKS+EPFE  E + R   +   S+++TS+ N
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFE--EPIDRFNNQL--SSTSTSLVN 60

Query: 61  EQPPVIN------------------NNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIR 120
           EQ PV+N                  NN+NVAA           ++ G    R PP+AVI+
Sbjct: 61  EQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAA----------VVVGRDQGRFPPMAVIQ 120

Query: 121 NVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEG 180
           N+IG CS  FVKQLTK+D+TD  GRLALHKEFVN +L PMFND+EDL +GI VI +D EG
Sbjct: 121 NIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEG 180

Query: 181 RQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGR 220
           R+YDM FKLW SKLYVLTKSWKEFYKTN+LTQ GE+++VWMFRHVV   LCFAI++G+
Sbjct: 181 REYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQ 224

[Close]

BLAST of ClCG06G008995 vs. ExPASy TrEMBL
Match: A0A0A0LC65 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.8e-43
Identity = 83/122 (68.03%), Postives = 102/122 (83.61%), Query Frame = 0


Query: 97  VAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIA 156
           +AVI+N+IG CS  FVKQL K+D+T+  GRLALHKEFV R+L+PMFN  E+L  GI V  
Sbjct: 1   MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 60

Query: 157 FDSEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAII 216
           +DSEGR+YDM FK WTSKLYVLTKSW +FYK+NNLT+ GE+++VWMFRHVVN  LCFAI+
Sbjct: 61  YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 120

Query: 217 QG 219
           +G
Sbjct: 121 RG 122

[Close]

BLAST of ClCG06G008995 vs. ExPASy TrEMBL
Match: A0A6J1CTE7 (putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 GN=LOC111014582 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.8e-35
Identity = 86/177 (48.59%), Postives = 108/177 (61.02%), Query Frame = 0


Query: 47  RFPGSTSTTSIGNEQPPVINNNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRNVIGV 106
           R P S+    +  E PP   NN N                 G     +PPV  IR+VIG 
Sbjct: 77  RQPSSSRNKQVNQEAPPDPPNNNN----------------DGEERRGMPPVPAIRDVIGQ 136

Query: 107 CSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFN---DNEDLVEGIDVIAFDSEGRQ 166
           CSRA+ K+LT SD+ +  GRLA+ KEFV + L PMFN   +NE+L EGI+V  ++ EGR+
Sbjct: 137 CSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGRE 196

Query: 167 YDMTFKLWTSKLYVLTKSWKEFYKTNNLT--QSGEYVTVWMFRHVVNHNLCFAIIQG 219
           + MTFK+W SKLYVL K WK F K NNLT   +GE++T+WMFRH   H LCFAII G
Sbjct: 197 FGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILG 237

[Close]

BLAST of ClCG06G008995 vs. ExPASy TrEMBL
Match: A0A4S4EXQ7 (TF-B3 domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_001439 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-28
Identity = 74/213 (34.74%), Postives = 114/213 (53.52%), Query Frame = 0


Query: 13  VEKDVYETALIICDIKSKSMEPFELMELMRRLKTRFPGSTSTTSIG------NEQPPVIN 72
           ++K     ALI+ ++K   ++  +  + +R +K +F GS      G       E   +++
Sbjct: 125 LKKQHESAALILSNMKFLELDN-QTADDLRIMKKKFIGSFGADPDGENMTRSQESSDIMD 184

Query: 73  NNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRNVIGVCSRAFVKQLTKSDLTDGLGR 132
           +   VA             + G  L RLPPV  +  +IG+C   F KQLT+SD+ D L R
Sbjct: 185 HEHGVA-------------IDGLTLPRLPPVKELEGLIGICCVHFEKQLTESDVKDNLSR 244

Query: 133 LALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTFKLWTSKLYVLTKSWKEFY 192
           +++ K  + + L P+ N  EDLV GI V  +DS G +Y M FK W SK++VLT+ WK F 
Sbjct: 245 ISIPKSIIEKFLKPLMNSKEDLVSGISVTTYDSRGNEYPMKFKTWASKIHVLTEGWKGFC 304

Query: 193 KTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGR 220
           + N L    ++VT+WMFRH+    LCF ++  R
Sbjct: 305 RANKLKAHPDWVTIWMFRHIKTEKLCFVVMARR 323

[Close]

BLAST of ClCG06G008995 vs. TAIR 10
Match: AT4G03170.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-18
Identity = 46/109 (42.20%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 108 SRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMT 167
           SR   KQL  SD+      L L KE V   ++P   D+E+ V+GIDV  +  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 168 FKLWT-SKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAI 216
           FK+W   K  VLT  WK+F +   L+ + ++VTVWMFRH+    LCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of ClCG06G008995 vs. TAIR 10
Match: AT4G03160.1 (BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1); Has 46 Blast hits to 46 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 7.1e-13
Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 109 RAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTF 168
           R   +QL  SD+ D   RL L KE V + +  +    +   +G++V  +   G  + M  
Sbjct: 63  RKVAEQLMDSDVKDNQYRLMLGKEPVKKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVL 122

Query: 169 KLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAI 216
           K+W     VLT  WK F K+  L +  +++T+WMFRH     +CFAI
Sbjct: 123 KIWIKGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of ClCG06G008995 vs. TAIR 10
Match: AT1G20600.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-11
Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = 0


Query: 61  QPPVINNNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRN--VIGVCSRAFVKQLTKS 120
           QP  + N   +   +    +  LRL+       L P  +  +  V    SR   KQL  S
Sbjct: 73  QPKRVKNQNIMKINIHDFSEETLRLIEDWYNAELDPQDIFGDDEVTRRFSRPIKKQLMSS 132

Query: 121 DLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTFKLWT-SKLYV 180
           D+     RL L KE V   ++P   ++ED V+G+DV  +  +G    M FK+W   K  V
Sbjct: 133 DVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMKFKMWNGDKTPV 192

Query: 181 LTKSWKEFYKTNNLTQSGEYVT 200
           LT  W +F     L ++ ++VT
Sbjct: 193 LTSGWMQFVADYGLLKTSDFVT 214

The following BLAST results are available for this feature:

BLAST of ClCG06G008995 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043114.1	2.4e-63	56.15	putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 put...	[more]
XP_031736688.1	2.7e-62	56.47	uncharacterized protein LOC116402065 [Cucumis sativus]	[more]
KGN56101.1	1.3e-61	56.30	hypothetical protein Csa_010492 [Cucumis sativus]	[more]
KAG6589940.1	4.6e-46	47.49	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7023605.1	2.7e-38	51.57	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of ClCG06G008995 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR14	1.6e-17	42.20	Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZR15	1.0e-11	33.64	Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LM90	4.2e-10	30.28	B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20...	[more]

BLAST of ClCG06G008995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAS8	1.2e-63	56.15	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0L7L0	6.4e-62	56.30	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 ...	[more]
A0A0A0LC65	8.8e-43	68.03	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 ...	[more]
A0A6J1CTE7	1.8e-35	48.59	putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 G...	[more]
A0A4S4EXQ7	1.6e-28	34.74	TF-B3 domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=...	[more]

BLAST of ClCG06G008995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03170.1	1.1e-18	42.20	AP2/B3-like transcriptional factor family protein	[more]
AT4G03160.1	7.1e-13	33.64	BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor f...	[more]
AT1G20600.1	3.0e-11	30.28	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 111..219 e-value: 0.0022 score: 25.5
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 111..216 e-value: 4.07975E-11 score: 56.9525
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 108..225 e-value: 1.6E-17 score: 65.2
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 110..206
None	No IPR available	PANTHER	PTHR31541:SF28	B3 DOMAIN PLANT PROTEIN	coord: 93..217
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 93..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G008995.1	ClCG06G008995.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding