ClCG06G008710 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG06G008710
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Dynein light chain
Location	CG_Chr06: 12933276 .. 12933773 (+)
RNA-Seq Expression	ClCG06G008710
Synteny	ClCG06G008710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATCTCAACTCCACACAGGAGAGAGAAATAAAAGAGGAAGCAGCCGGTAAAAAAGATGTTGGAAGGGAAAGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATTCACGCCATGGCCTCTGCATCTCACGCCCTTGATCTCTTCGACGTCTCCGATTCCCTCTCTCTTGCTTCCCATATCAAGAAGGTAGGCTACTACAATCTACACAATTCATAATCATAAATCATTAATTTAATTATTTCAATTTGAAATTAAATTAGGAATTTGATCGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCCAATTTCGGCTGCTTCTTCACTCATTCCAAGGGGAGTTTCATCTATTTTTCTCTTCAAACTCTCAATTTTCTCATCTTTAAAGCCTCCTTCTGATTATGTTCTTTAGGGGCAATCTCGTCTACAAAACAAACCCTGTGTATGTATGCATGATGTATTTGTCACATGTATCTTCTAATTTCTC

mRNA sequence

ATAATCTCAACTCCACACAGGAGAGAGAAATAAAAGAGGAAGCAGCCGGTAAAAAAGATGTTGGAAGGGAAAGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATTCACGCCATGGCCTCTGCATCTCACGCCCTTGATCTCTTCGACGTCTCCGATTCCCTCTCTCTTGCTTCCCATATCAAGAAGGAATTTGATCGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCCAATTTCGGCTGCTTCTTCACTCATTCCAAGGGGAGTTTCATCTATTTTTCTCTTCAAACTCTCAATTTTCTCATCTTTAAAGCCTCCTTCTGATTATGTTCTTTAGGGGCAATCTCGTCTACAAAACAAACCCTGTGTATGTATGCATGATGTATTTGTCACATGTATCTTCTAATTTCTC

Coding sequence (CDS)

ATGTTGGAAGGGAAAGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATTCACGCCATGGCCTCTGCATCTCACGCCCTTGATCTCTTCGACGTCTCCGATTCCCTCTCTCTTGCTTCCCATATCAAGAAGGAATTTGATCGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCCAATTTCGGCTGCTTCTTCACTCATTCCAAGGGGAGTTTCATCTATTTTTCTCTTCAAACTCTCAATTTTCTCATCTTTAAAGCCTCCTTCTGA

Protein sequence

MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVVGSNFGCFFTHSKGSFIYFSLQTLNFLIFKASF

Homology

[Close]

BLAST of ClCG06G008710 vs. NCBI nr
Match: XP_038878771.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida])

HSP 1 Score: 171.0 bits (432), Expect = 4.7e-39
Identity = 84/90 (93.33%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQ HAMASASHALDLFDVSDSLSLA+HIKK+FDR YGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQSHAMASASHALDLFDVSDSLSLAAHIKKDFDRAYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKA 91
          GSNFGCFFTHSKGSFIYFSL+TLNFLIFK+
Sbjct: 61 GSNFGCFFTHSKGSFIYFSLETLNFLIFKS 90

[Close]

BLAST of ClCG06G008710 vs. NCBI nr
Match: XP_022933771.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dynein light chain 1, cytoplasmic-like [Cucurbita maxima] >XP_023529424.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo] >KAG6587968.1 hypothetical protein SDJN03_16533, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021857.1 hypothetical protein SDJN02_15585 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 83/91 (91.21%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQIHA ASASHALDLFDVSD LSLA+HIKKEFDR+YGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKAS 92
          GSNFGCFFTHSKG+FIYFSL+TLNFLIFKA+
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAA 91

[Close]

BLAST of ClCG06G008710 vs. NCBI nr
Match: XP_004150050.1 (dynein light chain 1, cytoplasmic [Cucumis sativus] >KAE8652965.1 hypothetical protein Csa_017734 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQ+HAMASAS ALDLFDVSDSLSLASHIKK+FD TYGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASQALDLFDVSDSLSLASHIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKA 91
          GSNFGCFFTHS G+FIYFSL+TLNFLIFK+
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 90

[Close]

BLAST of ClCG06G008710 vs. NCBI nr
Match: XP_008462685.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 4.4e-37
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQ+HAMASASHALDLFDVSD LSLAS+IKK+FD TYGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKA 91
          GSNFGCFFTHS G+FIYFSL+TLNFLIFK+
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 90

[Close]

BLAST of ClCG06G008710 vs. NCBI nr
Match: XP_022144999.1 (dynein light chain 1, cytoplasmic-like [Momordica charantia])

HSP 1 Score: 157.9 bits (398), Expect = 4.1e-35
Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGK  VKETDMSEKMQIHAMASASHALDLFDVSD LSLA+HIKKEFDRTYG GWQCVV
Sbjct: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFK 90
          GSNFG FFTHS  +FIYF+L+TLNFLIFK
Sbjct: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 89

[Close]

BLAST of ClCG06G008710 vs. ExPASy Swiss-Prot
Match: Q94748 (Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-14
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          M E KA +K  DM E MQ  A+ +A+ ALD +++     +A++IKKEFDR Y   W C+V
Sbjct: 1  MGERKAVIKNADMHEDMQETAVHTAAAALDKYEIEK--DVAAYIKKEFDRKYNPNWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKA 91
          G +FG + TH    FIYF LQ   FL+FK+
Sbjct: 61 GKHFGSYVTHETQHFIYFYLQERAFLLFKS 88

[Close]

BLAST of ClCG06G008710 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-14
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKA 91
          G NFG + TH    FIYF L  +  L+FK+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of ClCG06G008710 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-14
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKA 91
          G NFG + TH    FIYF L  +  L+FK+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of ClCG06G008710 vs. ExPASy Swiss-Prot
Match: P61273 (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-14
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKA 91
          G NFG + TH    FIYF L  +  L+FK+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of ClCG06G008710 vs. ExPASy Swiss-Prot
Match: P63168 (Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-14
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKA 91
          G NFG + TH    FIYF L  +  L+FK+
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of ClCG06G008710 vs. ExPASy TrEMBL
Match: A0A6J1I806 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111471695 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.1e-39
Identity = 83/91 (91.21%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQIHA ASASHALDLFDVSD LSLA+HIKKEFDR+YGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKAS 92
          GSNFGCFFTHSKG+FIYFSL+TLNFLIFKA+
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAA 91

[Close]

BLAST of ClCG06G008710 vs. ExPASy TrEMBL
Match: A0A6J1EZZ1 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111441083 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.1e-39
Identity = 83/91 (91.21%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQIHA ASASHALDLFDVSD LSLA+HIKKEFDR+YGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKAS 92
          GSNFGCFFTHSKG+FIYFSL+TLNFLIFKA+
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAA 91

[Close]

BLAST of ClCG06G008710 vs. ExPASy TrEMBL
Match: A0A1S3CJ38 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500988 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQ+HAMASASHALDLFDVSD LSLAS+IKK+FD TYGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKA 91
          GSNFGCFFTHS G+FIYFSL+TLNFLIFK+
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 90

[Close]

BLAST of ClCG06G008710 vs. ExPASy TrEMBL
Match: A0A6J1CTX2 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111014529 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.0e-35
Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGK  VKETDMSEKMQIHAMASASHALDLFDVSD LSLA+HIKKEFDRTYG GWQCVV
Sbjct: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFK 90
          GSNFG FFTHS  +FIYF+L+TLNFLIFK
Sbjct: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 89

[Close]

BLAST of ClCG06G008710 vs. ExPASy TrEMBL
Match: A0A1S3UQ79 (Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-35
Identity = 74/91 (81.32%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKA VKETDMS KMQIHAMA+ASHALDL+DVSD +S+A+HIKKEFD  YG+GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMAAASHALDLYDVSDCISVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKAS 92
          GSNFGC+FTHS G+FIYF+L+TLNFLIFK S
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFKGS 91

[Close]

BLAST of ClCG06G008710 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 141.4 bits (355), Expect = 3.7e-34
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKA V+ETDM  KMQ+ AM  AS +LDLFDV DS+S+A+HIKKEFD  YGSGWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKAS 92
          G+NFGCFFTHSKG+FIYF L TLNFLIFK +
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFKGA 91

[Close]

BLAST of ClCG06G008710 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 138.7 bits (348), Expect = 2.4e-33
Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKA V+++DM  KMQ+ AMA AS ALDLFDV D  S+A HIKKEFD  YGSGWQCVV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKAS 92
          GSNFGCFFTHSKG+FIYF L+TL FLIFK +
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGA 91

[Close]

BLAST of ClCG06G008710 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-23
Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVV 60
          MLEGKA + +TDM + M+  A++ AS ALD FDV++   +A  IKKEFDR+YGSGWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFSLQTLNFLIFKAS 92
          G++FG F TH  G FI+FS+ +L  L+FK S
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFKGS 91

[Close]

BLAST of ClCG06G008710 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 85.1 bits (209), Expect = 3.2e-17
Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 1  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCV 60
          MLEGKA V+++DM  KMQ+ AMA AS ALDLFDV D  S+A HIKKEFD  YGSGWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]

BLAST of ClCG06G008710 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 77.0 bits (188), Expect = 8.7e-15
Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 12  DMSEKMQIHAMASASHALDLFDVSDSLSLASHIKKEFDRTYGSGWQCVVGSNFGCFFTHS 71
           DM   MQ HA   A   LD  +   S  +A ++KKEFD+ YG  W C+VGS+FG F THS
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  KGSFIYFSLQTLNFLIFK 90
            G FIYFS+  L  L+FK
Sbjct: 183 TGCFIYFSMDKLYVLLFK 200

The following BLAST results are available for this feature:

BLAST of ClCG06G008710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878771.1	4.7e-39	93.33	dynein light chain 1, cytoplasmic-like [Benincasa hispida]	[more]
XP_022933771.1	1.1e-38	91.21	dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dyne...	[more]
XP_004150050.1	1.5e-37	91.11	dynein light chain 1, cytoplasmic [Cucumis sativus] >KAE8652965.1 hypothetical p...	[more]
XP_008462685.1	4.4e-37	90.00	PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]	[more]
XP_022144999.1	4.1e-35	87.64	dynein light chain 1, cytoplasmic-like [Momordica charantia]	[more]

BLAST of ClCG06G008710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94748	1.9e-14	46.67	Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1	[more]
P61285	4.2e-14	43.33	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
P63167	4.2e-14	43.33	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]
P61273	4.2e-14	43.33	Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 ...	[more]
P63168	4.2e-14	43.33	Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1	[more]

BLAST of ClCG06G008710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I806	5.1e-39	91.21	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111471695 PE=3 SV=1	[more]
A0A6J1EZZ1	5.1e-39	91.21	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111441083 PE=3 SV=1	[more]
A0A1S3CJ38	2.1e-37	90.00	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500988 PE=3 SV=1	[more]
A0A6J1CTX2	2.0e-35	87.64	Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111014529 PE=3 SV=1	[more]
A0A1S3UQ79	7.6e-35	81.32	Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV...	[more]

BLAST of ClCG06G008710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16120.1	3.7e-34	75.82	Dynein light chain type 1 family protein	[more]
AT1G52240.2	2.4e-33	74.73	RHO guanyl-nucleotide exchange factor 11	[more]
AT4G27360.1	1.7e-23	56.04	Dynein light chain type 1 family protein	[more]
AT1G52240.1	3.2e-17	71.19	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	8.7e-15	50.00	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..90 e-value: 8.0E-42 score: 154.9
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..89 e-value: 2.0E-31 score: 108.2
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..90
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 2..90 e-value: 9.1E-32 score: 110.9
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..90
None	No IPR available	PANTHER	PTHR11886:SF71	DYNEIN LIGHT CHAIN	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G008710.1	ClCG06G008710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding