ClCG06G001320 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG06G001320
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPre-rRNA-processing protein TSR1-like protein
LocationCG_Chr06: 1374097 .. 1384242 (-)
RNA-Seq ExpressionClCG06G001320
SyntenyClCG06G001320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCTTCCTTCCTTCCTTCCTTCGTCTCATCTCTTGTGTGCGAAGTGACCCACGAAAACGGAGCCCCCACAACCTCCTCCGGCGAACCCACGACGTGACGACTTCTGCGGCTTGGACTCGAAAATTGCGCGACCCAACAATCGGACAGCAACGTTTTCCTCCCTTTCGAACAGGTTAGACACTTACCTATCATTTTCAGCGTTGGATTTGAGTACCCACTTCTTAGTTGCTTCATATATGTAGTATTGAGTGTATTCGGGCACCAAGGTGGATTCGAGTGGTTTTGGGTAAGAATCAGTAGGTGTAACACTCTAGATTTCCTTTCGAACTAGTTTAAGGTTCCTTAAGTCTGTCTCTAACATTTGGAACTATTTGGACACTTTTCAGCGAAGACCCAAATATGTTGTGGTGAATTTTAGGCGTTACAGCTCTATTTAGATTCTTTGGACTTCAATTAAGGGGCTGTAATTTAGTTTATAACTCTTGCGTACTCTTTATTTGTAGTTTAGACTTGATTTGAGGTGTTCAAATCAAGGTTTGAGGTTGTGTTGGATAAGATTACTATTGATTACTCTTTTCGAACAATTTTAGTCTCTGAATAAGGTTATGAACCAAGTTCTAACCTCGGAACCCTGTTTTTTTCACTATTTCAGAAGTGTTTCAATTAATTTAGGAGTACTTTTGTTAGATGATATAATATTAAATCTTTCTTCCCTCATCAACTTAAGCGATTGGGTCAATTGGCGATTTAACATGGTATTGGAGTAAGTGGTCTAAGTGGTCCTGTGTTTAAAACCATGCAATGTCATTTCCTCCCTAATTAATATTGATTTCTATTTGTTGGGTTTTCATCATATTTCAAGCCTACAAGTGACAGGGAATGTTAGATAATATAATATTAAATTTGCCTTCACCCATCTACGATTTAATAACTTTAAAACACTTAGATAAGTGGATTTCTATTTGAAGAGTCTGTTTGATAGCATGCTGTGTGCTTCATGTGTATTACTTCTTTCATGATGTAAATACCTTATGTTCTTGAGTTTGTTTTGTATTTTGGATGCGTAAGTATGATGAAAAATGTGGTGAAACTGTTGTGATATGATTTTGATTGTTGAATGCTTGAATACATATATGAAATATGTCGTGAGCATGTTGTTGCTTATGTGGACTAGATATAAAACATTGTTTAGAAGTATATATAGGTCTCCTGGTGAGTTTGTGTGAGAAGAAGTTGAAGAATTTGGTGTTCTTATGAAGGAAAGTTTGATGAATATCATTTTGCCTCGAATAAAAATGTTTGAGGGGTGATATCTCTCCATTGGATTTAGAAGTGTATTGATGCCTTAGATAAAATTGACCAAAGGTCGGTATGATGAATTTAGAATGAGTATGCATGCTAGTCATCGAATGCCTTGAATAAAAATGGTCAAGGGTTAAATGTTGAGCGCCGTAGAGAACGTTAAGGTCCTGAATAGAAAGGGTCAGGAGTAAGGGTATCTCAAAGGAATTTTTCTCAGTAAGTTTGGATGTGGACTAAATGTAAGTGTTGAGTGCGCTTTTGCGCTTGATTAGAGATTAGTGATGGTTCATGCGTTAGCATGTTATGATCGTTATATCTTTTTCTTGTTTAACGAACATGTATAAGTAATGTGAATATCATGATGGTAGCCTTGCATATTGTTTGATGGTTGTTTAGGTTTGAGCCACTTACTGAGTACACGTGTTTGTATTGATCCACCCACAATTTATCAGGCAATGATGAGGCTCACGACCTTGGTGATGTTGTAGAGGAGCCTCGAGAAAGACTGACCATTAAGTGTGTTTCTTATATTTATTTTGTTTAAGAACTTTCCAGAGGCTGGTTTTCTATTTTTGTTTTAAACTTGTTATGGTTTCCCTTGAATTGCGGGGTTGTAATAGACTTAGTTTATTTATTTTGCTTTGAGGATTAGTATGAGTTTGACTTTAGTTTGAATTGGCTAGTTGTGGTTCATGTTAGAATTTGGGGAAATTTTTGTTGGATCTGGTTAAAAACCATTTTTTAATATTAATTTTTGTTGATTTGTTTTGTAGTTAAAATTGTTATTAGGTGTTTTATAGGGCCCGTTTTGATTAACTTAAAAAATAAATGTTTTTCAAAATTTCATTTTCATTTAAACATTTTTTGTAAGAACTCTTTAAAATAAAGACACTAATGACTTTCAAAATCCATTTTGAGTGGTTGCCAAAGACTTGTATTTCTTTCAAAATGACCTCCTTTTTTATTTTTTTATTTTTATTTTTAATTTAAATTTATTAAAAAAAAATTAAACACTTGAGAAGGTATTCCAAACACACCTGTAAACGTGTAGAATTTATGGTTACATTGTTATGCTATCAATTTTTTTTATAGCATCAGTTATTAGAGTTAGTTAAAGGTTAAATTTTAGTAATGCTCTCTAGTTTGGTGTTGAAGTTTGGGGGCGTTACAGAATTGATTGAAAATAAGAGTCGTCCAAGTGCTTTGTTATTCATGCATTTTATTTAGAAAGTAATAGGAGTTGTTTAGGGTAAATAAAGTTAATAAACTTATTTTAAAAGTGGAGGCTGGAAGGCTTAAAGTGGACTTCAAGATTCTCTTTACCATTTTTACAGTTTCCATGGGAGGGAATAGGACTCAAGTCAATAAACCCCATAAATCACGCTTCTCATCCAAGGCAACGCGACAACAACACAAAACCTCTTTAAAAGGTGTGTAGCTTCTCTCTGTTTAGTTTACTAAAGCCCATTTTTTGTTTTCTTCATTTTATGTTAATTTTTGGTTCATGTAGGGACCTGAAGGTTAATTTTCTCTGTAACTAATACTTTGGGTTGTGTAGCTATTGATTTCTAATTTGAGTTTTGGGTCACTAGATAGAAGCAAAGTTACGAAGAATAATGTTGCTAAGGGAGCTCGGGCTGCTCGGCTTCAGCGTAGTAAGATGGTACTTGATGTCCAATCTTTTTCTACCTACCCTGCCTTTTCCTTGGGCATACTTGTACTTGGTATGTCTCATTGTCATTGGTGCTTCTTTTATTTTGATTAGTGAACTTTTTTGTTGCAGATCCGAGAGCAGAAAAGGGTGGCTGTTTTACAGGACAAAAGAGCATCAAGTGGATCAAAGAGTCCTCCTAGAGTCATAGTGAGTAGTTAGGATGTCCACAACATTTCATATCAAGCTTAATTTCCTATTTACTAATTCTCTGCTTCGATCAATTTTCTTATTCTATTTGTTAATGGTTACTGATTATGATGCCCACAGGTTCTTTTTGGGCTCTCTGCCTCAGTAGACCTGAATCCACTTGCTGAGGAACTTTTGTCTCTATTAACTCCTGGAGCTTCGTCATCCACGGTTGCTTCTTTGGAGTACAAGCTACGGGCAACAGTAAGTTATATCTATGTGATTCTTCTTCATGCTTTTCTTTAATTTTTGAAGCCGTGGCTAAATTATTCTATATTATTGATGTTTTATGTTCAAACTTCTCTATTTTATTGAGTTTTCCGGAACCCTTAGTAATTTTTTGTGTACCAATCCTTATGTTTGCTTTCATTGTGGTAACTTTTTATGTTCTAGGTACTGAAAGCACCCTATGGTGACTTGCAATCATGTATGGAGATGGCTAAGGTTCTAACTTCTTATGCAATTGTATCTTTTGTTATTTCTTCACTCATCAAGTTTTAAGTTTTGATATGTAGATTTCTAATTGGTGTCATGTACCTAATATTTGTAGGTAGCTGACCTAATTGCTTTTGTGGCCTCTGCAAGCTACTATATTGAAGGAAGCACATCTCTCTACATTGATTCATTTGGAAGCGAATGCCTTTCTGTATTGAGATCTCTGGGCTTACCGAGTACTGCAGTGCTTATTCGAGTATGTTATCATGTTATTTACTTTTGAGACTTCTAATTTAAAAGGAGAAGAATTATTTGCATGTATGGTTAAAGATCTTTTCCTTTTCTGGCAGGACCTACCCACTGATATAAAGAAAAGAAACGATTATAAAAAAATGTGTATTTCTAGCATTACTTCTGAATTTCCCGAGGACTGTAAGTTTTATCCTGCAGACACTAAAGATGAGTTGCACAAGGTAAACAAATGTAGGTTTTTTGTTTAGGTTCATTTACACGCCTTTTTATGCTAATTTTCATTTTTCATGATTTATATTGCAGTTTATGTGGCTTTTCAAGGAGCAAAGGCTCACTGTTCCTCATTGGAGAAATCAAAGGCCTTATTTGATGTCTCAGAAGGTTCTTAAATATGTTTATTTTTAATACATTTCTTAAATTTGGACCAATATTTTTCCTTCCACTCTAAAAGTAACATCTGTTTGTTAGTTATTATTTTGCTAATTTTCTTGTTCTCCCGTAGGTTGATATGCTAGCTGATAATTGTAATCCAGGAAAATGTACCCTTCTTCTCACTGGTTATCTACGTGCTCGAAGTCTCTCTGTGAATCAACTGGTACGATCTTTTGTTTTGCCATTTTTCTTGCTTCATGTAGGTTGACATGTTGTTCATACTTGTCATTCCTTTCATCAGGTTCATGTTGCTGGAGCAGGAGATTTTCAGCTTTGCAAAATTGAAGTTCTCAAGGATCCAGTTCCATTGAATCCGAGAATTGGACAAGATGCCATGGACACCCAGGACGAGGAGGTAACAAACTTATTCTTTGCATTCGTAGAGTGACCTTTTCTTTTCCTGGCGGTTTGGTGTACTGTGGTCAATCATTCTGAGTTTTTTTTGTTTGAGTTTTCTTATCCAACTATATTATTATTTTTCCTCTCATTCCAACTGATGTTCTTGTTAACTAAAATAGAAGTTTGAGCTTTTTAACCATTCTGCTTATCGTTATTATATTGTTGAGGGAACCTTGTTATTGGTAGAATTAGGATTTGGGTAAAGGGTCATGAGAATTTAGATGGAAAATATTGGGTTTTTCTTTCCTCTTGACACTGCAATTCAAATCCAAAATGATTACCTGATCTTCTTTCGCAAATGGTTCTGACAATTTATTCAGTAATGATATATTTGTGTTCTGAAAAATTATTCTTGCATACTAGTTTCTTCATTAATTTTTCAGTTGAGAAAATGTATTATTAGGTTTGGAATTTCATTCTTTAATAGGCTGTACGATCCATATTTTCCTCAATGTTCTGTTTCGAGTGAAGTTTTTAAATGGTATTTTATGTTTGCATATGATGGTTGCTCCTTGTTTACTTTTAATTCACATTTTTACGCATTTTAGTTTACACCTTTCTTGACACGTAGGTTGTTCGTTTGTTGGAGCCATCAGAGCAAGAGCCATTGGTTGTTGAGAACGAACCTGATCCTCTTTCTGGTGAACAGGTATTTTTCTCAACAAGAAATCAACTTTTCTATAAAAACAAGTTTAGACTCAAGACAAAGATCTTCTTCCATTCATCGTTTGCTATTCTCAATTTCCCTTGCTATTTCTTCTTCTTGGGAAGGATATTGCCAACATGGTGGCTGGTGGGAGCTAAATGCATGATATTAAAGAGCTAACTTGAGATATAGAATGTTCGATGAGTGGCTTGACTATTTTATTCTACTTTTTGTTCTTGTTAATTTTCTTTGAAGTTTATGGATTGTATTTATTTTCTTTTATGCTTTCAAACTAATCTATAAGAGCTCATAGGTGTTTTCACATTCTCTAATCTTGACATCAAGCTATTTCATTAGTTTTAGTTATAGTTGATGTTTGATGACTGGGAATTTGTTTTCCCTCAGACTTGGCCAACTGAGGCAGACAGAGCCGAGGCAGAAAGAAATCAGAAAGAAAAGAATTCGAGGAAAAGAGCACTTGCTCATGGCACTTCTGAGTATCAGGTTTGTGTGTTAATCTGCTAATGCTCTCCCCCATGATTTGCATGTTCGTAAAGTTCTTGTCAGCATCACATGTGTTTTCCTTTGCTTTTATTAAACACACAGGAAGCTTGGGAAATAGGTGAGACGGATGATGAGGACTCTGATGTTGACAATGAAATTGATGGTATGATGTTAGACAGTGGTTATACAAATGAAGTGGACGACCTTAATAATCCGGGCCTCAGTGATGATGATCAAGCTTCTTTGGAGTTTATAAATTCTGATCAGGAGACAGATGTGGATTCGGTGATGATGGTGAGAAACTCATTATTGTTTTTTAACCAGTGATTTTCATTCCTCATTTTACCAGACCATGGTTATTGTGTCAAAGCTAGAGAAGTAGCACCTTTGGGTGCAATTTGCAGTCAACAACTTTATGATTATTATGAGCTATTTATTATTGAATGCTGAAAAATAGAATACAATAGGATGTTAAATCTTGTAAGAACTGAGGAAAATTTCAAATAGTCTGCCCTTTTAGTATTCTCATGTTAAATGTAATTTCTGAATCTAGAGACTTAACACGCTTGAACCAATGGAAAGTAAAGAATAGAATGGCATTGTATTCCTAACCACCTTTGATCTCTATGCTTTTCTTTGATGTTTTGGTTTATTTTCAGCCATCAAATATAATAGAGTAAGCTTGCACAGTTCTAACTATTGTTTCACCTTTTACTTAACATCTTGGAATATCTTCTAGTGTTATTCAAGTATGGTCAAATTAAGGCAGAAGCATATGAGGGAACTCACATTAATAAACAGAATGGTAAACCAATAAGTTACAACAGAGAAACAATAAAATCATGAAAGCAATGAAAAGGGCATTCTTTTTTGCAACTATACTAACTTGAAATTTCTCAATTATCATTATTGAGAGTAAGGTGGTTACTTTTCACTTCTATCTGCAATTTCTTGTTGATGCTGCTAGTCCCTAAATTTTCTCGCAATGCAGGATGGTGAAATGACCAACGAACAAAAATTGGATGAGATTCAAAAGATAAAAAATGCTCATGCTGAAGATGAAGGTTGGTCATTTATTTCTTTTGGATTTTGAAGAGTTATAGATGCCTGACTTATTTATAGTTTTATAATTTGAACACTTCTTAACCATCAATCTCTAATTAATCATGTGAACATGGCAGTTTGCGCGTAGTGTCTCCACTCTAATACAAGATTAATATGTCGACTTCTTACATGAAATATGATTGAAGATGAAAGATTGTGGTAGATACATGGTATTATGTTATACACAGATGTTTAGTAATCTTCATTATTTTTTGTTGCAGAATTCCCAGATGAAGTGGATACACCTATGGATATCCCTGCCAGAAAGCGGTTTGCAAAGTATAGAGGTCTCAAGTCCTTTAGGACATCCTCGTGGGATCCCCAAGTATTGTTCCTAATTCCTATTATTCAATTATGATTTCGTATACCCTTACTTAACAATACTGGAGTTCATTGAAACCACAATCTCCTCTTAATTCAGGAGAGTTTGCCTCAAGACTATGCAAGAATTTTTGAATTCAATAACATCTCCAGAACAAAAAAGCACGTTCTTGCTAAAGCTCTAGAAATAGAGCAAGGGAACAGAGATGACTGTGTGCCATCATGCTCCTATTTAAGGCTGCATGTAAAGGAAGTGCCTGTTGGTGCTGCTTCGAAATTGTGTGAGTTAGTGAAGTCAATGCCAATTACAGCTTGTGGACTTCTGCAGCATGAATCCAAGATGTCTGTCCTCCATTTCAGGTACTTTCAGATTCCTCAATTGTCATCTATTCCACTGTGAATAATTTCTGGGTTCAAAGTTCCGACTAATCTTGTTGTTGCAGCATCAAGAAGCATGATGTCTCTGAAGAGATATCCGATAAAGTTGGGAATACTGAGAACACCAAGATGCATGATAAGAATTCTCCTCCCCTGAAGGGAAAAGAAAAATTGGTGTTTCATGTTGGGTTTCGCCAATTTGTTACAAGGTACTTTTCTAATTTTTCTATACAAGACATCTAATCTTTCGCTTTTTTATTTTTATTATAGATAACCATCTCTTAACTTTCAGGCCAATATTTTCAACTGACAACTTCAATTCGGACAAGCACAAGATGGAGAGATTTCTTCATGGTGGAAGATTTTCTATAGCTTCAATTTATGCTCCTATATCGTTTGCTCCCCTTCCTTTGATAGTTCTTAGGAGTTTTAATGGAAACGCTTCATTTGCTGCCTCTGGTTCGTTAAAGAGCATTGACCCCAGACGGATAATTTTGAAGAAGATTATTTTATCTGGGTAATGTCATCTGTGACCTTATCAACTAAGTACTTATTTTATCTCATTATTTGAAGATTTTTGTTTCTATTATTTTATTTATTGAACAAGAGGGTGGGTTATACCTCTCACGAAGTCAAGTGGGGAAGGGGAAATGGTTGTTTGCAAATCTACTTTGTCTTAGTAAACTCTTCAGCATTAGTTCAATAGTTTTTATTTTTATTAAATTTCTGTAGGTTTTTATGTTCAGAATTAATTTGATGCTATGGGGAATTCTTAAATGCTAAAACTGAAGCTGTCTTTCTTTTTATTTGTTTATTTTTTTCTGCAGTTATCCTCAACGAGTATCAAAATTAAAAGCTACTGTTAGATACATGTTCCATAATCCTGATGACGTGAGATGGTTCAAGGTAAGAGAAATGCATATGAGGAGGCGGTAATCTGTTACTTTTTGGTTGAAATTGGAATTCTAGTATCAGTGAATGTTTTATGTTTCTCTTTCCTCTCTAGTTCATTACTACTCTGTGATTGATGGCTCTAAAGACTCCTCTGGTAGAGTGGAACTGTCTTGTTTTTGCGTTATCTACGAGGTAGTGTGGAGGAAATTTGTAGTTGGTTTTGAGAGGGATCTGAAGAAAGAAAAAGCTAGGATTTCCTCGGGCATTGATTTTGGGGCAAGAGGAAATAAATTTGTTTTCTGGAATTGTGCTAAAATTCATAAAATTTAAACAAAAAACATTTTTATTTCGTCCAGGAGGGTGGGTTTGGAATTTTTTTCAGAAAACAGAAGTGCTTCATAAATAATATTTGCACGACAATGAATTCCTTTTCCAATAGTGTTTGGACAACTTTTTTTGAAATACCTTTTCTGCAAGCCATTCCAAACTTTCAAGGTCTATACAGGAAAATTTAAGTGCTTTTGGTAGAGAAACATGGAATCTTACCAGAAATTGGGGGAATTTGTTATGGAATTTGGGTATAATTATAAATAGAGGTTAGGGGAATGAATAAGGGAGACATAATTTCAGTAAACGATGTAGGGCTTGGGAGAATTCTCAAGAAAGGGAGGGTCCAAGTACCTCGAACACTTGGTTTATCTTGTAATTTTGTTATCGTTTATCTTTCAATATATTTTGGTTGTATCAAAATGATAAACGGAGGATTGAAGAGCATCCTTGATCCACCCTTGCTCATAGGAACTCTCTAGTAGAGGTTGATCTCAAAGCAGCACTTTGTCTTTGAAAAAAATGGATTAAAAAATTGTATAAAGATCTTGATTACGTTGTTTTGTTTTCATTTAGCTAGACAGAATGGTCGTTATTTTATATATTATGGTTTTCCTCCTAATGTTGAATCATTGATGCAGCCCGTGGATGTGTGGACAAAGTGTGGGAGACGCGGTCGCGTCAAGGAACCTGTCGGTACACACGGTAAGCACCCCAGTACCTGAACATCTATGGACTTAGCCCTCACAATCCTTGAGACATTTGTTGTTAATATAATATGGCCTGTAATCTTGTGGAACACAGGAGCAATGAAGTGTGTTTTCAATGGAGTTCTACAGCAGCATGACACAGTTTGCATGAGCTTATACAAGCGTGTTTATCCCAAATGGCCCGAACATCTCTTCCCTCTCCTTGATGCTTGATTTTACTGGCTGAGTGACCCAGATTGAAGTTTTGGTAGTTCTTTCTTTCTGGCTCATTCTTTATTTTTGACCTTTTTATGTATTATATATTCCACAGCTACGAACATTTTTCATCGTGTAATGTCGTAAAGCTATAGTTTCAGCCCCTTCTTCTTTTTAGATTTATTTGTTGTAATCTTTGATGGATTTTTAATCGTTCTGTAAAGGTTTTTTTCCCCTAAACACTATTTGAAGGCTGAGAGTTGAAAAATGTTTTTCAAGTGTAATGTTTAATTATTCCTGAACTGAATATTCTGAATATTATGTAATACTAACAACTATGAATTCC

mRNA sequence

TTCCTTCCTTCCTTCCTTCCTTCGTCTCATCTCTTGTGTGCGAAGTGACCCACGAAAACGGAGCCCCCACAACCTCCTCCGGCGAACCCACGACGTGACGACTTCTGCGGCTTGGACTCGAAAATTGCGCGACCCAACAATCGGACAGCAACGTTTTCCTCCCTTTCGAACAGTTTCCATGGGAGGGAATAGGACTCAAGTCAATAAACCCCATAAATCACGCTTCTCATCCAAGGCAACGCGACAACAACACAAAACCTCTTTAAAAGATAGAAGCAAAGTTACGAAGAATAATGTTGCTAAGGGAGCTCGGGCTGCTCGGCTTCAGCGTAGTAAGATGATCCGAGAGCAGAAAAGGGTGGCTGTTTTACAGGACAAAAGAGCATCAAGTGGATCAAAGAGTCCTCCTAGAGTCATAGTTCTTTTTGGGCTCTCTGCCTCAGTAGACCTGAATCCACTTGCTGAGGAACTTTTGTCTCTATTAACTCCTGGAGCTTCGTCATCCACGGTTGCTTCTTTGGAGTACAAGCTACGGGCAACAGTACTGAAAGCACCCTATGGTGACTTGCAATCATGTATGGAGATGGCTAAGGTAGCTGACCTAATTGCTTTTGTGGCCTCTGCAAGCTACTATATTGAAGGAAGCACATCTCTCTACATTGATTCATTTGGAAGCGAATGCCTTTCTGTATTGAGATCTCTGGGCTTACCGAGTACTGCAGTGCTTATTCGAGACCTACCCACTGATATAAAGAAAAGAAACGATTATAAAAAAATGTGTATTTCTAGCATTACTTCTGAATTTCCCGAGGACTGTAAGTTTTATCCTGCAGACACTAAAGATGAGTTGCACAAGTTTATGTGGCTTTTCAAGGAGCAAAGGCTCACTGTTCCTCATTGGAGAAATCAAAGGCCTTATTTGATGTCTCAGAAGGTTGATATGCTAGCTGATAATTGTAATCCAGGAAAATGTACCCTTCTTCTCACTGGTTATCTACGTGCTCGAAGTCTCTCTGTGAATCAACTGGTTCATGTTGCTGGAGCAGGAGATTTTCAGCTTTGCAAAATTGAAGTTCTCAAGGATCCAGTTCCATTGAATCCGAGAATTGGACAAGATGCCATGGACACCCAGGACGAGGAGGTTGTTCGTTTGTTGGAGCCATCAGAGCAAGAGCCATTGGTTGTTGAGAACGAACCTGATCCTCTTTCTGGTGAACAGACTTGGCCAACTGAGGCAGACAGAGCCGAGGCAGAAAGAAATCAGAAAGAAAAGAATTCGAGGAAAAGAGCACTTGCTCATGGCACTTCTGAGTATCAGCATCACATGTGTTTTCCTTTGCTTTTATTAAACACACAGGAAGCTTGGGAAATAGGTGAGACGGATGATGAGGACTCTGATGTTGACAATGAAATTGATGGTATGATGTTAGACAGTGGTTATACAAATGAAGTGGACGACCTTAATAATCCGGGCCTCAGTGATGATGATCAAGCTTCTTTGGAGTTTATAAATTCTGATCAGGAGACAGATGTGGATTCGGTGATGATGGATGGTGAAATGACCAACGAACAAAAATTGGATGAGATTCAAAAGATAAAAAATGCTCATGCTGAAGATGAAGAATTCCCAGATGAAGTGGATACACCTATGGATATCCCTGCCAGAAAGCGGTTTGCAAAGTATAGAGGTCTCAAGTCCTTTAGGACATCCTCGTGGGATCCCCAAGAGAGTTTGCCTCAAGACTATGCAAGAATTTTTGAATTCAATAACATCTCCAGAACAAAAAAGCACGTTCTTGCTAAAGCTCTAGAAATAGAGCAAGGGAACAGAGATGACTGTGTGCCATCATGCTCCTATTTAAGGCTGCATGTAAAGGAAGTGCCTGTTGGTGCTGCTTCGAAATTGTGTGAGTTAGTGAAGTCAATGCCAATTACAGCTTGTGGACTTCTGCAGCATGAATCCAAGATGTCTGTCCTCCATTTCAGCATCAAGAAGCATGATGTCTCTGAAGAGATATCCGATAAAGTTGGGAATACTGAGAACACCAAGATGCATGATAAGAATTCTCCTCCCCTGAAGGGAAAAGAAAAATTGGTGTTTCATGTTGGGTTTCGCCAATTTGTTACAAGGCCAATATTTTCAACTGACAACTTCAATTCGGACAAGCACAAGATGGAGAGATTTCTTCATGGTGGAAGATTTTCTATAGCTTCAATTTATGCTCCTATATCGTTTGCTCCCCTTCCTTTGATAGTTCTTAGGAGTTTTAATGGAAACGCTTCATTTGCTGCCTCTGGTTCGTTAAAGAGCATTGACCCCAGACGGATAATTTTGAAGAAGATTATTTTATCTGGTTATCCTCAACGAGTATCAAAATTAAAAGCTACTGTTAGATACATGTTCCATAATCCTGATGACGTGAGATGGTTCAAGCCCGTGGATGTGTGGACAAAGTGTGGGAGACGCGGTCGCGTCAAGGAACCTGTCGGTACACACGGAGCAATGAAGTGTGTTTTCAATGGAGTTCTACAGCAGCATGACACAGTTTGCATGAGCTTATACAAGCGTGTTTATCCCAAATGGCCCGAACATCTCTTCCCTCTCCTTGATGCTTGATTTTACTGGCTGAGTGACCCAGATTGAAGTTTTGGTAGTTCTTTCTTTCTGGCTCATTCTTTATTTTTGACCTTTTTATGTATTATATATTCCACAGCTACGAACATTTTTCATCGTGTAATGTCGTAAAGCTATAGTTTCAGCCCCTTCTTCTTTTTAGATTTATTTGTTGTAATCTTTGATGGATTTTTAATCGTTCTGTAAAGGTTTTTTTCCCCTAAACACTATTTGAAGGCTGAGAGTTGAAAAATGTTTTTCAAGTGTAATGTTTAATTATTCCTGAACTGAATATTCTGAATATTATGTAATACTAACAACTATGAATTCC

Coding sequence (CDS)

ATGGGAGGGAATAGGACTCAAGTCAATAAACCCCATAAATCACGCTTCTCATCCAAGGCAACGCGACAACAACACAAAACCTCTTTAAAAGATAGAAGCAAAGTTACGAAGAATAATGTTGCTAAGGGAGCTCGGGCTGCTCGGCTTCAGCGTAGTAAGATGATCCGAGAGCAGAAAAGGGTGGCTGTTTTACAGGACAAAAGAGCATCAAGTGGATCAAAGAGTCCTCCTAGAGTCATAGTTCTTTTTGGGCTCTCTGCCTCAGTAGACCTGAATCCACTTGCTGAGGAACTTTTGTCTCTATTAACTCCTGGAGCTTCGTCATCCACGGTTGCTTCTTTGGAGTACAAGCTACGGGCAACAGTACTGAAAGCACCCTATGGTGACTTGCAATCATGTATGGAGATGGCTAAGGTAGCTGACCTAATTGCTTTTGTGGCCTCTGCAAGCTACTATATTGAAGGAAGCACATCTCTCTACATTGATTCATTTGGAAGCGAATGCCTTTCTGTATTGAGATCTCTGGGCTTACCGAGTACTGCAGTGCTTATTCGAGACCTACCCACTGATATAAAGAAAAGAAACGATTATAAAAAAATGTGTATTTCTAGCATTACTTCTGAATTTCCCGAGGACTGTAAGTTTTATCCTGCAGACACTAAAGATGAGTTGCACAAGTTTATGTGGCTTTTCAAGGAGCAAAGGCTCACTGTTCCTCATTGGAGAAATCAAAGGCCTTATTTGATGTCTCAGAAGGTTGATATGCTAGCTGATAATTGTAATCCAGGAAAATGTACCCTTCTTCTCACTGGTTATCTACGTGCTCGAAGTCTCTCTGTGAATCAACTGGTTCATGTTGCTGGAGCAGGAGATTTTCAGCTTTGCAAAATTGAAGTTCTCAAGGATCCAGTTCCATTGAATCCGAGAATTGGACAAGATGCCATGGACACCCAGGACGAGGAGGTTGTTCGTTTGTTGGAGCCATCAGAGCAAGAGCCATTGGTTGTTGAGAACGAACCTGATCCTCTTTCTGGTGAACAGACTTGGCCAACTGAGGCAGACAGAGCCGAGGCAGAAAGAAATCAGAAAGAAAAGAATTCGAGGAAAAGAGCACTTGCTCATGGCACTTCTGAGTATCAGCATCACATGTGTTTTCCTTTGCTTTTATTAAACACACAGGAAGCTTGGGAAATAGGTGAGACGGATGATGAGGACTCTGATGTTGACAATGAAATTGATGGTATGATGTTAGACAGTGGTTATACAAATGAAGTGGACGACCTTAATAATCCGGGCCTCAGTGATGATGATCAAGCTTCTTTGGAGTTTATAAATTCTGATCAGGAGACAGATGTGGATTCGGTGATGATGGATGGTGAAATGACCAACGAACAAAAATTGGATGAGATTCAAAAGATAAAAAATGCTCATGCTGAAGATGAAGAATTCCCAGATGAAGTGGATACACCTATGGATATCCCTGCCAGAAAGCGGTTTGCAAAGTATAGAGGTCTCAAGTCCTTTAGGACATCCTCGTGGGATCCCCAAGAGAGTTTGCCTCAAGACTATGCAAGAATTTTTGAATTCAATAACATCTCCAGAACAAAAAAGCACGTTCTTGCTAAAGCTCTAGAAATAGAGCAAGGGAACAGAGATGACTGTGTGCCATCATGCTCCTATTTAAGGCTGCATGTAAAGGAAGTGCCTGTTGGTGCTGCTTCGAAATTGTGTGAGTTAGTGAAGTCAATGCCAATTACAGCTTGTGGACTTCTGCAGCATGAATCCAAGATGTCTGTCCTCCATTTCAGCATCAAGAAGCATGATGTCTCTGAAGAGATATCCGATAAAGTTGGGAATACTGAGAACACCAAGATGCATGATAAGAATTCTCCTCCCCTGAAGGGAAAAGAAAAATTGGTGTTTCATGTTGGGTTTCGCCAATTTGTTACAAGGCCAATATTTTCAACTGACAACTTCAATTCGGACAAGCACAAGATGGAGAGATTTCTTCATGGTGGAAGATTTTCTATAGCTTCAATTTATGCTCCTATATCGTTTGCTCCCCTTCCTTTGATAGTTCTTAGGAGTTTTAATGGAAACGCTTCATTTGCTGCCTCTGGTTCGTTAAAGAGCATTGACCCCAGACGGATAATTTTGAAGAAGATTATTTTATCTGGTTATCCTCAACGAGTATCAAAATTAAAAGCTACTGTTAGATACATGTTCCATAATCCTGATGACGTGAGATGGTTCAAGCCCGTGGATGTGTGGACAAAGTGTGGGAGACGCGGTCGCGTCAAGGAACCTGTCGGTACACACGGAGCAATGAAGTGTGTTTTCAATGGAGTTCTACAGCAGCATGACACAGTTTGCATGAGCTTATACAAGCGTGTTTATCCCAAATGGCCCGAACATCTCTTCCCTCTCCTTGATGCTTGA

Protein sequence

MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKRVAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAERNQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSGYTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGEMTNEQKLDEIQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHVLAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSVLHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFNSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCVFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA
Homology
[Close]
BLAST of ClCG06G001320 vs. NCBI nr
Match: XP_038875506.1 (pre-rRNA-processing protein TSR1 homolog [Benincasa hispida])

HSP 1 Score: 1507.3 bits (3901), Expect = 0.0e+00
Identity = 766/812 (94.33%), Postives = 779/812 (95.94%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGGNR QVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR
Sbjct: 1   MGGNRAQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKRA SGSKSPPRVIVLFGLSASVDLNPLAE+LLSLLTPGASSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRALSGSKSPPRVIVLFGLSASVDLNPLAEDLLSLLTPGASSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPYGDLQSCMEMAKVADLIAFV SASYYIEGSTSLYIDSFGSECLSVLRSLGLPST
Sbjct: 121 TVLKAPYGDLQSCMEMAKVADLIAFVVSASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCK+YPADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKYYPADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WRNQRPYLMSQKVDM+ADNC  GKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL
Sbjct: 241 WRNQRPYLMSQKVDMVADNCTSGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPR+ QDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEA++
Sbjct: 301 KDPVPLNPRVEQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEADK 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSG 420
           NQKEK+ RKRALA GTSEY             QEAWEIGETDDEDSDVDNE DGMMLDSG
Sbjct: 361 NQKEKHLRKRALALGTSEY-------------QEAWEIGETDDEDSDVDNETDGMMLDSG 420

Query: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGEMTNEQKLDEIQKIKNAHAED 480
           YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGEMTNEQKLDEIQKIKNAHAED
Sbjct: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGEMTNEQKLDEIQKIKNAHAED 480

Query: 481 EEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHVL 540
           EEFPDEVDTP+DIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRT+KHVL
Sbjct: 481 EEFPDEVDTPIDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTQKHVL 540

Query: 541 AKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSVL 600
           AKALE++QGNR+DCV SCSYLRLHVKEVPVGAASKLCEL KSMPITACGLLQHESKMSVL
Sbjct: 541 AKALELDQGNREDCVASCSYLRLHVKEVPVGAASKLCELAKSMPITACGLLQHESKMSVL 600

Query: 601 HFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN 660
           HFSIKKHDVSEEISDKVG TENTKMHDKNSPPLKGKEKLVFHVGFRQFVTR IFSTDNFN
Sbjct: 601 HFSIKKHDVSEEISDKVGTTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRSIFSTDNFN 660

Query: 661 SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIILK 720
           SDKHKMERFLH GRFSIASIYAPISFAPLPLIVLRS  GN SFAASGSLKSIDPRRIILK
Sbjct: 661 SDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRSVEGNTSFAASGSLKSIDPRRIILK 720

Query: 721 KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCVF 780
           KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGR+KEPVGTHGAMKCVF
Sbjct: 721 KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRIKEPVGTHGAMKCVF 780

Query: 781 NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 813
           NGVLQQHDTVCMSLYKRVYPKWPE LFPLLDA
Sbjct: 781 NGVLQQHDTVCMSLYKRVYPKWPERLFPLLDA 799

[Close]
BLAST of ClCG06G001320 vs. NCBI nr
Match: KAA0039900.1 (pre-rRNA-processing protein TSR1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1477.2 bits (3823), Expect = 0.0e+00
Identity = 751/812 (92.49%), Postives = 772/812 (95.07%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGGNR QVNKPHKSRFS+KATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR
Sbjct: 1   MGGNRAQVNKPHKSRFSTKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKRA SGSKSPPRVIVLF LSASVDLNPLAE+LLSLL PGASSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRALSGSKSPPRVIVLFRLSASVDLNPLAEDLLSLLAPGASSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST
Sbjct: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AVLIRDLPTDIKK+NDYKKMCISSI+SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVLIRDLPTDIKKKNDYKKMCISSISSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WR QRPYLMSQKVDM+ADNC PG+CTLLLTGYLRARSLSVNQLVHVAGAGDFQL KIEVL
Sbjct: 241 WRTQRPYLMSQKVDMVADNCTPGRCTLLLTGYLRARSLSVNQLVHVAGAGDFQLSKIEVL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPR  QDAMDTQD+E++RLLEPSE EPLVVENEPDPLSGEQTWPTEADRAEA+R
Sbjct: 301 KDPVPLNPRTEQDAMDTQDDEIIRLLEPSEHEPLVVENEPDPLSGEQTWPTEADRAEADR 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSG 420
           NQKEK+ RKRALAHGTSEY             QEAWEIG+++DEDSDVDNE DGMMLDS 
Sbjct: 361 NQKEKHLRKRALAHGTSEY-------------QEAWEIGDSEDEDSDVDNETDGMMLDSS 420

Query: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGEMTNEQKLDEIQKIKNAHAED 480
           YTNEV+DLNN G+SDDDQASLEF NSDQETD+DSVM+DGEMTNEQKLDEIQKIKNAHAED
Sbjct: 421 YTNEVNDLNNQGISDDDQASLEFENSDQETDMDSVMLDGEMTNEQKLDEIQKIKNAHAED 480

Query: 481 EEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHVL 540
           EEFPDEVDTPMDIPARKRFAKYRGLKSFRTS+WDPQESLPQDYARIFEFNNISRT+KHVL
Sbjct: 481 EEFPDEVDTPMDIPARKRFAKYRGLKSFRTSTWDPQESLPQDYARIFEFNNISRTQKHVL 540

Query: 541 AKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSVL 600
           AKALEIEQGN D CV S SYLRLHVKEVPVGAASKLCEL KSMPITACGLLQHESKMSVL
Sbjct: 541 AKALEIEQGNCDHCVASGSYLRLHVKEVPVGAASKLCELAKSMPITACGLLQHESKMSVL 600

Query: 601 HFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN 660
           HFSIKKHDVSEEISDKVG TEN KM DKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN
Sbjct: 601 HFSIKKHDVSEEISDKVGTTENAKMPDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN 660

Query: 661 SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIILK 720
           SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRS  GNASFAASGSLKSIDPRRIILK
Sbjct: 661 SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSVEGNASFAASGSLKSIDPRRIILK 720

Query: 721 KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCVF 780
           KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGR+KEPVGTHGAMKCVF
Sbjct: 721 KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRIKEPVGTHGAMKCVF 780

Query: 781 NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 813
           NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA
Sbjct: 781 NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 799

[Close]
BLAST of ClCG06G001320 vs. NCBI nr
Match: XP_023547507.1 (pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023547508.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1464.1 bits (3789), Expect = 0.0e+00
Identity = 744/813 (91.51%), Postives = 769/813 (94.59%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGGNR QVNKPHKSRFSSKATRQQHKTSL DRSKVTKNNVAKGARAARLQRSKMIREQKR
Sbjct: 1   MGGNRAQVNKPHKSRFSSKATRQQHKTSLTDRSKVTKNNVAKGARAARLQRSKMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKRA SGSKSPPRVIVL GLSASVDLNPLAE+LLSLL+PGASSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRALSGSKSPPRVIVLLGLSASVDLNPLAEDLLSLLSPGASSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPYGDLQSCMEMAKVADLIAFV SASYYIEGSTSLYI+SFGSECLSVLRSLGLPST
Sbjct: 121 TVLKAPYGDLQSCMEMAKVADLIAFVVSASYYIEGSTSLYINSFGSECLSVLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WRNQRPYLMSQKVDM+ADNC PGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIE+L
Sbjct: 241 WRNQRPYLMSQKVDMVADNCTPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEIL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPRI QD+MDTQDEEVVRLLEPSEQEPLVVENE DPLSGEQTWPTEADRAEA+R
Sbjct: 301 KDPVPLNPRIEQDSMDTQDEEVVRLLEPSEQEPLVVENELDPLSGEQTWPTEADRAEADR 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSG 420
           +QKEK+ RKRALAHGTS+Y             QEAWEIG+TDDEDSD DNE DGM+LDSG
Sbjct: 361 SQKEKHLRKRALAHGTSDY-------------QEAWEIGDTDDEDSDFDNESDGMILDSG 420

Query: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGE-MTNEQKLDEIQKIKNAHAE 480
           YTNEVDDLNNPGLSDDDQAS E INSDQETD+DSVMMDG+ +TNEQ+LDE QKIKNAHAE
Sbjct: 421 YTNEVDDLNNPGLSDDDQASFELINSDQETDMDSVMMDGDNLTNEQRLDEFQKIKNAHAE 480

Query: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHV 540
           DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEF+NISRT+KHV
Sbjct: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFSNISRTQKHV 540

Query: 541 LAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSV 600
           LAKALE E GNRDDCV S SYLRLHVKEVPVGAASKLCEL KSMPITACGLL+HESKMSV
Sbjct: 541 LAKALEREHGNRDDCVASSSYLRLHVKEVPVGAASKLCELTKSMPITACGLLRHESKMSV 600

Query: 601 LHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNF 660
           LHFSIKKHDVSE ISDKVG TE+TK HDKNSPP+KGKEKLVFHVGFRQFVTRPIFSTDNF
Sbjct: 601 LHFSIKKHDVSEVISDKVGTTEDTKKHDKNSPPIKGKEKLVFHVGFRQFVTRPIFSTDNF 660

Query: 661 NSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIIL 720
           NSDKHKMERFLH GRFSIASIYAP+SFAPLPLIVLR+  G +SFAASGSLKSIDPRRIIL
Sbjct: 661 NSDKHKMERFLHAGRFSIASIYAPVSFAPLPLIVLRTVEGISSFAASGSLKSIDPRRIIL 720

Query: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCV 780
           KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGR+KEPVGTHG MKCV
Sbjct: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRIKEPVGTHGVMKCV 780

Query: 781 FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 813
            NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA
Sbjct: 781 LNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 800

[Close]
BLAST of ClCG06G001320 vs. NCBI nr
Match: XP_023513549.1 (pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023513550.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023513551.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1456.0 bits (3768), Expect = 0.0e+00
Identity = 738/812 (90.89%), Postives = 766/812 (94.33%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGG+R QVNKPHKSRFSSKATRQQHKTS KDRSKVTKNNVAKGARAARLQR+KMIREQKR
Sbjct: 1   MGGSRAQVNKPHKSRFSSKATRQQHKTSFKDRSKVTKNNVAKGARAARLQRNKMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKRASSGSK+PPRVIVLFGLSASVDLNPLAE+LLSLL PG+SSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRASSGSKNPPRVIVLFGLSASVDLNPLAEDLLSLLAPGSSSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPYGDLQSCMEMAKVADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPST
Sbjct: 121 TVLKAPYGDLQSCMEMAKVADLIAFVTSASYYIEGSTSLYIDSFGSECLSLLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AV IRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVFIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WRNQRPYLMSQKVDM+ADNC  GKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL
Sbjct: 241 WRNQRPYLMSQKVDMVADNCTSGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPR+ QDAMDT D EV++LLEPSEQEPLVVEN+PDPLSGEQTWPTEADRAEA+R
Sbjct: 301 KDPVPLNPRMEQDAMDTHDVEVIQLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADR 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSG 420
           NQKEK+ RKRALAHGTSEY             QEAWEIG+TDDEDSDVDNE DGMMLDSG
Sbjct: 361 NQKEKHLRKRALAHGTSEY-------------QEAWEIGDTDDEDSDVDNESDGMMLDSG 420

Query: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGE-MTNEQKLDEIQKIKNAHAE 480
           YTNEVDDLNNP LSDDDQAS E INSD ETD+DSVMMDGE +TNEQKLDEIQKIKNAHA+
Sbjct: 421 YTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLTNEQKLDEIQKIKNAHAD 480

Query: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHV 540
           DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDY+RIFEF+NISRT+KHV
Sbjct: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYSRIFEFSNISRTQKHV 540

Query: 541 LAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSV 600
           LAKALE+EQGNRDDCV S SYLRLHVKEVP+GAASKLCEL KSMPITACGLLQHESKMSV
Sbjct: 541 LAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKSMPITACGLLQHESKMSV 600

Query: 601 LHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNF 660
           LHFSIK HDVSEEISD VG T+N+K HDK S PLKGKEKLVFHVGFRQFVTRPIFS+DNF
Sbjct: 601 LHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNF 660

Query: 661 NSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIIL 720
           NSDKHKMERFLH GRFSIASIYAPISFAPLPLIVLR+  G +SFAASGSLK IDPRRIIL
Sbjct: 661 NSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISSFAASGSLKCIDPRRIIL 720

Query: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCV 780
           KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKC+
Sbjct: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCI 780

Query: 781 FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 812
           FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD
Sbjct: 781 FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 799

[Close]
BLAST of ClCG06G001320 vs. NCBI nr
Match: KAG6592850.1 (Pre-rRNA-processing protein TSR1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1456.0 bits (3768), Expect = 0.0e+00
Identity = 738/812 (90.89%), Postives = 766/812 (94.33%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGG+R QVNKPHKSRFSSKATRQQHKTS KDR+KVTKNNVAKGARAARLQR+KMIREQKR
Sbjct: 1   MGGSRAQVNKPHKSRFSSKATRQQHKTSFKDRNKVTKNNVAKGARAARLQRNKMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKRASSGSK+PPRVIVLFGLSASVDLNPLAE+LLSLL PG+SSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRASSGSKNPPRVIVLFGLSASVDLNPLAEDLLSLLAPGSSSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPYGDLQSCMEMAKVADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPST
Sbjct: 121 TVLKAPYGDLQSCMEMAKVADLIAFVTSASYYIEGSTSLYIDSFGSECLSLLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AV IRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVFIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WRNQRPYLMSQKVDM+ADNC  GKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLC+IEVL
Sbjct: 241 WRNQRPYLMSQKVDMVADNCTSGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCRIEVL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPR+ QDAMDT D EVV+LLEPSEQEPLVVEN+PDPLSGEQTWPTEADRAEA+R
Sbjct: 301 KDPVPLNPRMEQDAMDTHDVEVVQLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADR 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSG 420
           NQKEK+ RKRALAHGTSEY             QEAWEIG+TDDEDSDVDNE DGMMLDSG
Sbjct: 361 NQKEKHLRKRALAHGTSEY-------------QEAWEIGDTDDEDSDVDNESDGMMLDSG 420

Query: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGE-MTNEQKLDEIQKIKNAHAE 480
           YTNEVDDLNNP LSDDDQAS E INSD ETD+DSVMMDGE +TNEQKLDEIQKIKNAHA+
Sbjct: 421 YTNEVDDLNNPCLSDDDQASFELINSDHETDIDSVMMDGENLTNEQKLDEIQKIKNAHAD 480

Query: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHV 540
           DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEF+NISRT+KHV
Sbjct: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFSNISRTQKHV 540

Query: 541 LAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSV 600
           LAKALE+EQGNRDDCV S SYLRLHVKEVP+GAASKLCEL KSMPITACGLLQHESKMSV
Sbjct: 541 LAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKSMPITACGLLQHESKMSV 600

Query: 601 LHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNF 660
           LHFSIK HDVSEEISD VG T+N+K HDK S PLKGKEKLVFHVGFRQFVTRPIFS+DNF
Sbjct: 601 LHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNF 660

Query: 661 NSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIIL 720
           NSDKHKMERFLH GRFSIASIYAPISFAPLPLIVLR+  G +SFAASGSLK IDPRRIIL
Sbjct: 661 NSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISSFAASGSLKCIDPRRIIL 720

Query: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCV 780
           KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKC+
Sbjct: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCI 780

Query: 781 FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 812
           FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD
Sbjct: 781 FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 799

[Close]
BLAST of ClCG06G001320 vs. ExPASy Swiss-Prot
Match: Q5XGY1 (Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis OX=8355 GN=tsr1 PE=2 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-125
Identity = 302/828 (36.47%), Postives = 445/828 (53.74%), Query Frame = 0 

Query: 3   GNRTQVNKPHKS-RFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKRV 62
           G   Q NKPHKS R   +  + +          + K N     +  R  ++  IR Q++ 
Sbjct: 13  GAYKQQNKPHKSGRHRGRGAQDRENKGRVAAKILGKKNKKDLRKLDRRHKANQIRRQRKD 72

Query: 63  AVLQDKRASSGSKSPPRVIVLFGLSASV---DLNPLAE----ELLSLLTPGASSSTVASL 122
           AVL +KR+      PP +++   L A     DL  L +    ++L +         +   
Sbjct: 73  AVLAEKRSLGTKDGPPHLVIAISLHARAVKDDLFSLVQNNEGDILHVNDQIKGLLALVCP 132

Query: 123 EYKLRATVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRS 182
           + K R   ++A   DL S +++AKVAD + F+       EG      DS+G  CLS L +
Sbjct: 133 KVKQRWCFIQANRDDLCSLLDLAKVADTLLFLLDPQ---EG-----WDSYGDYCLSCLFA 192

Query: 183 LGLPSTAVLIRDLP-TDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKE 242
            GLPS  + ++ +    IKKR D KK     I + F  D K +  DT+ E    +     
Sbjct: 193 QGLPSYVLAVQGMNYIPIKKRADIKKQLSKVIENRF-TDAKLFQLDTEQEAAVLIRQIST 252

Query: 243 QRLTVPHWRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQ 302
           Q+     +R++R Y+++Q+ D    + +    TL L+GY+R + L+VN+LVH+ G GDF 
Sbjct: 253 QKQRHLAFRSRRSYMLAQRADFQPTDESGLVGTLKLSGYVRGQELNVNRLVHIVGHGDFH 312

Query: 303 LCKIEVLKDPVPLNPRI-------GQDAMDTQDE-----------EVVRLLEPSEQEPLV 362
           + +I+   DP PLNPR+       GQD M+  DE           +V+   +PS QE L 
Sbjct: 313 MSQIDAPPDPYPLNPRVHKPKTKSGQD-MEMSDEPATGSEMEQDIKVLMKADPSAQESLQ 372

Query: 363 VENEPDPLSGEQTWPTEADRAEAERNQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEA 422
            E  PDP+ GEQTWPTE +  EAE   K  +   + +  GTS YQ        +L+ +  
Sbjct: 373 CEVVPDPMEGEQTWPTEEELKEAEDALKGTSKVVKKVPKGTSAYQ-----AAWILDDEGD 432

Query: 423 WEIGETDDEDSDVDNEIDGMMLDSGYTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSV 482
            E    DD+D D++ + +  M D  Y+ E D   N    + +  ++     D + D    
Sbjct: 433 GEEESDDDDDEDMEEDAEDAM-DDAYSEEEDGSGNEEAEESETLTIPDSTRDDKYD---- 492

Query: 483 MMDGEMTNEQKLDEIQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDP 542
               E  +EQ+ +++ +      +DE FPDEVDTP D  AR RF KYRGLKSFRTS WD 
Sbjct: 493 ----ENVDEQEEEQMLEKYKLQRQDEVFPDEVDTPRDQIARIRFQKYRGLKSFRTSPWDV 552

Query: 543 QESLPQDYARIFEFNNISRTKKHVLAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASK 602
           +E+LP+DYARIF+F++  RT+K V       E+  +D+      Y+ +H+  VPV   S 
Sbjct: 553 KENLPRDYARIFQFHDFFRTRKRVFK-----EEEEKDEGAMVGWYVTVHISAVPV---SV 612

Query: 603 LCELVKSMPITACGLLQHESKMSVLHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKG 662
           +      +P+  C LL HE KMSV++  +++H          GN E          P+K 
Sbjct: 613 MEHFKHGLPLVLCSLLPHEQKMSVMNMLVRRHP---------GNNE----------PIKA 672

Query: 663 KEKLVFHVGFRQFVTRPIFSTDNFNSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLR 722
           KE+L+FH GFR+F   P+FS  + ++DKHK ERFL      + ++YAPI+F P  ++V +
Sbjct: 673 KEELIFHCGFRRFRASPLFS-QHSSADKHKSERFLRSDTSVVVTVYAPITFPPASVLVFK 732

Query: 723 S-FNGNASFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPV 782
             +NG     A+GSL +++P RI++K+I+LSG+P ++ K  A VRYMF N +DV WFKPV
Sbjct: 733 QRYNGMQDLVATGSLLNVNPDRIVIKRIVLSGHPFKIMKRTAVVRYMFFNREDVLWFKPV 788

Query: 783 DVWTKCGRRGRVKEPVGTHGAMKCVFNGVLQQHDTVCMSLYKRVYPKW 803
           ++ TK GRRG +KEP+GTHG MKC F+G L+  DTV M+LYKRVYPKW
Sbjct: 793 ELRTKWGRRGHIKEPLGTHGHMKCHFDGQLKSQDTVLMNLYKRVYPKW 788

[Close]
BLAST of ClCG06G001320 vs. ExPASy Swiss-Prot
Match: Q5R434 (Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii OX=9601 GN=TSR1 PE=2 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.4e-121
Identity = 304/831 (36.58%), Postives = 448/831 (53.91%), Query Frame = 0 

Query: 3   GNRTQVNKPHK-SRFSSKATRQQH---KTSLKDRSKVTKNNVAKGARAARLQRSKMIREQ 62
           G   Q NK HK  R   + + Q+    + +LK  SK  +  +   +R  +  R+  +R+Q
Sbjct: 7   GTLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKVRKEL---SRVDQRHRASQLRKQ 66

Query: 63  KRVAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPG---------ASSS 122
           K+ AVL +KR   G   PP  +++  L + + L P A +LL     G           S 
Sbjct: 67  KKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISL-PEAMQLLQDRDTGTVHLNELGNTQSF 126

Query: 123 TVASLEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECL 182
            +     K R     A  GDL   ++MAKVAD I F+      +EG      DS G  CL
Sbjct: 127 MLLCPRLKHRWFFTSARPGDLHIVLDMAKVADTILFLLDP---LEG-----WDSTGDYCL 186

Query: 183 SVLRSLGLPSTAVLIRDLP-TDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFM 242
           S L + GLP+  + ++ +    +KK+ D +K    ++   FP D K    DT+ E    +
Sbjct: 187 SCLFAQGLPTYTLAVQGISGLPLKKQIDARKKLSKAVEKRFPHD-KLLLLDTQQEAGMLL 246

Query: 243 WLFKEQRLTVPHWRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAG 302
                Q+     +R++R YL ++ VD +A   N    TL ++GY+R ++L+VN+L+H+ G
Sbjct: 247 RQLANQKQQHLAFRDRRAYLFARAVDFVASEENNLVGTLKISGYVRGQTLNVNRLLHIVG 306

Query: 303 AGDFQLCKIEVLKDPVPLNPR--------------IGQDAMDTQDE--EVVRLLEPSEQE 362
            GDFQ+ +I+   DP PLNPR                 D +D  +E  +V+   +P  QE
Sbjct: 307 HGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDTVDDMEEGLKVLMKADPDRQE 366

Query: 363 PLVVENEPDPLSGEQTWPTEADRAEAERNQKEKNSRKRALAHGTSEYQHHMCFPLLLLNT 422
            L  E  PDP+ GEQTWPTE + +EA+   KE +   + +  GTS YQ      +L   +
Sbjct: 367 SLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEW---ILDGGS 426

Query: 423 QEAWEIGETDDEDSDVDNEIDGMMLDSGYTNEVDDLNNPGLSDDDQASLEFINSDQETDV 482
           Q     GE D+ + D          D  + + +++ +    S++++   E +   +    
Sbjct: 427 QSG---GEGDEYEYD----------DMEHEDFMEEESQDESSEEEEEEYETMTIGESVHD 486

Query: 483 DSVMMDGEMTNEQKLDEIQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSS 542
           D  + D ++  E +   ++K K    E E FPDEVDTP D+ AR RF KYRGLKSFRTS 
Sbjct: 487 D--LYDKKIDEEAEAKMLEKYKQERLE-EMFPDEVDTPRDVAARIRFQKYRGLKSFRTSP 546

Query: 543 WDPQESLPQDYARIFEFNNISRTKKHVLAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGA 602
           WDP+E+LPQDYARIF+F N + T+K +     E+E+   +     C Y+ LHV EVPV  
Sbjct: 547 WDPKENLPQDYARIFQFQNFTNTRKSIFK---EVEEKEVEGAEVGC-YVTLHVSEVPVSV 606

Query: 603 ASKLCELVKSMPITACGLLQHESKMSVLHFSIKKHDVSEEISDKVGNTENTKMHDKNSPP 662
               C   +  P+ A  LL HE KMSVL+  +++           GNTE          P
Sbjct: 607 VE--C-FRQGTPLIAFSLLPHEQKMSVLNMVVRRDP---------GNTE----------P 666

Query: 663 LKGKEKLVFHVGFRQFVTRPIFSTDNFNSDKHKMERFLHGGRFSIASIYAPISFAPLPLI 722
           +K KE+L+FH GFR+F   P+FS  +  +DKHK++RFL      +A++YAPI+F P  ++
Sbjct: 667 VKAKEELIFHCGFRRFRASPLFS-QHTAADKHKLQRFLTADMALVATVYAPITFPPASVL 726

Query: 723 VLR-SFNGNASFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWF 782
           + +   NG  S  A+G L S+DP R+++K+++LSG+P ++    A VRYMF N +DV WF
Sbjct: 727 LFKQKSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPLKMFTKMAVVRYMFFNREDVLWF 778

Query: 783 KPVDVWTKCGRRGRVKEPVGTHGAMKCVFNGVLQQHDTVCMSLYKRVYPKW 803
           KPV++ TK GRRG +KEP+GTHG MKC FNG L+  DTV M+LYKRV+PKW
Sbjct: 787 KPVELRTKWGRRGHIKEPLGTHGHMKCSFNGKLKSQDTVLMNLYKRVFPKW 778

[Close]
BLAST of ClCG06G001320 vs. ExPASy Swiss-Prot
Match: Q2NL82 (Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens OX=9606 GN=TSR1 PE=1 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.5e-118
Identity = 303/831 (36.46%), Postives = 442/831 (53.19%), Query Frame = 0 

Query: 3   GNRTQVNKPHK-SRFSSKATRQQH---KTSLKDRSKVTKNNVAKGARAARLQRSKMIREQ 62
           G   Q NK HK  R   + + Q+    + +LK  SK  +  +   +R  +  R+  +R+Q
Sbjct: 7   GPLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKVRKEL---SRVDQRHRASQLRKQ 66

Query: 63  KRVAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPG---------ASSS 122
           K+ AVL +KR   G   PP  +++  L + + L P A +LL     G           + 
Sbjct: 67  KKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISL-PEAMQLLQDRDTGTVHLNELGNTQNF 126

Query: 123 TVASLEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECL 182
            +     K R     A  GDL   ++MAKVAD I F+      +EG      DS G  CL
Sbjct: 127 MLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDP---LEG-----WDSTGDYCL 186

Query: 183 SVLRSLGLPSTAVLIRDLP-TDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFM 242
           S L + GLP+  + ++ +    +KK+ D +K    ++   FP D K    DT+ E    +
Sbjct: 187 SCLFAQGLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHD-KLLLLDTQQEAGMLL 246

Query: 243 WLFKEQRLTVPHWRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAG 302
                Q+     +R++R YL +  VD +    N    TL ++GY+R ++L+VN+L+H+ G
Sbjct: 247 RQLANQKQQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLNVNRLLHIVG 306

Query: 303 AGDFQLCKIEVLKDPVPLNPR--------------IGQDAMDTQDE--EVVRLLEPSEQE 362
            GDFQ+ +I+   DP PLNPR                 DA+D  +E  +V+   +P  QE
Sbjct: 307 YGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPGRQE 366

Query: 363 PLVVENEPDPLSGEQTWPTEADRAEAERNQKEKNSRKRALAHGTSEYQHHMCFPLLLLNT 422
            L  E  PDP+ GEQTWPTE + +EA+   KE +   + +  GTS YQ      +L   +
Sbjct: 367 SLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEW---ILDGGS 426

Query: 423 QEAWEIGETDDEDSDVDNEIDGMMLDSGYTNEVDDLNNPGLSDDDQASLEFINSDQETDV 482
           Q     GE D+ + D D E +  M +               S +++   E +   +    
Sbjct: 427 QSG---GEGDEYEYD-DMEHEDFMEEESQDE----------SSEEEEEYETMTIGESVHD 486

Query: 483 DSVMMDGEMTNEQKLDEIQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSS 542
           D  + D ++  E +   ++K K    E E FPDEVDTP D+ AR RF KYRGLKSFRTS 
Sbjct: 487 D--LYDKKVDEEAEAKMLEKYKQERLE-EMFPDEVDTPRDVAARIRFQKYRGLKSFRTSP 546

Query: 543 WDPQESLPQDYARIFEFNNISRTKKHVLAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGA 602
           WDP+E+LPQDYARIF+F N + T+K +  +  E E    +       Y+ LHV EVPV  
Sbjct: 547 WDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAE----VGWYVTLHVSEVPVSV 606

Query: 603 ASKLCELVKSMPITACGLLQHESKMSVLHFSIKKHDVSEEISDKVGNTENTKMHDKNSPP 662
               C   +  P+ A  LL HE KMSVL+  +++           GNTE          P
Sbjct: 607 VE--C-FRQGTPLIAFSLLPHEQKMSVLNMVVRRDP---------GNTE----------P 666

Query: 663 LKGKEKLVFHVGFRQFVTRPIFSTDNFNSDKHKMERFLHGGRFSIASIYAPISFAPLPLI 722
           +K KE+L+FH GFR+F   P+FS  +  +DKHK++RFL      +A++YAPI+F P  ++
Sbjct: 667 VKAKEELIFHCGFRRFRASPLFS-QHTAADKHKLQRFLTADMALVATVYAPITFPPASVL 726

Query: 723 VLR-SFNGNASFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWF 782
           + +   NG  S  A+G L S+DP R+++K+++LSG+P ++    A VRYMF N +DV WF
Sbjct: 727 LFKQKSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVLWF 777

Query: 783 KPVDVWTKCGRRGRVKEPVGTHGAMKCVFNGVLQQHDTVCMSLYKRVYPKW 803
           KPV++ TK GRRG +KEP+GTHG MKC F+G L+  DTV M+LYKRV+PKW
Sbjct: 787 KPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKW 777

[Close]
BLAST of ClCG06G001320 vs. ExPASy Swiss-Prot
Match: Q5SWD9 (Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-114
Identity = 295/840 (35.12%), Postives = 440/840 (52.38%), Query Frame = 0 

Query: 3   GNRTQVNKPHK-SRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKRV 62
           G   Q NK HK  R     + Q+          + K    + +R  +  R+  +R+QKR 
Sbjct: 7   GPLKQQNKAHKGGRHHGGGSAQRDSKGRVGPKILCKKLKRQLSRIDQRHRASQLRKQKRE 66

Query: 63  AVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLS--------LLTPGASSSTV-- 122
           +VL +KR       PP  +++  L + + L P A +LL         L   G++ S +  
Sbjct: 67  SVLAEKRQLGSKDGPPHQVLVVPLHSRISL-PEAFKLLQNEDLGTVYLSERGSTQSFMLL 126

Query: 123 -ASLEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLS 182
             SL+++   T  +   GDL + ++MAKVAD I F+      +EG      DS G  CLS
Sbjct: 127 CPSLKHRWFFTYARP--GDLHTLLDMAKVADTILFLLDP---LEG-----WDSTGDYCLS 186

Query: 183 VLRSLGLPSTAVLIRDLP-TDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMW 242
            L + GLP+  + ++ L     KK+ D +K     +   FPED K    DT+ E    + 
Sbjct: 187 CLFAQGLPTYTLAVQGLSGFPPKKQIDARKKLSKMVEKRFPED-KLLLLDTQQESGMLLR 246

Query: 243 LFKEQRLTVPHWRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGA 302
               Q+     +R++R YL +   D +    +    TL ++GY+R R+L+VN L+H+ G 
Sbjct: 247 QLANQKQRHLAFRDRRAYLFAHVADFVPSEESDLVGTLKISGYVRGRTLNVNSLLHIVGH 306

Query: 303 GDFQLCKIEVLKDPVPLNPRIGQD------AMDT----------QDEEVVRLLEPSEQEP 362
           GDFQ+ +I+   DP PLNPR+ +       AM+           +D +V+   +P  QE 
Sbjct: 307 GDFQMNQIDAPVDPFPLNPRVIKSQKKPNMAMEVCVTDAAPDMEEDLKVLMKADPDHQES 366

Query: 363 LVVENEPDPLSGEQTWPTEADRAEAERNQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQ 422
           L  E  PDP+ GEQTWPTE +  EA+   K+++   + +  GTS Y             Q
Sbjct: 367 LQTEAIPDPMEGEQTWPTEEELDEADDLLKQRSRVVKKVPKGTSSY-------------Q 426

Query: 423 EAWEIGETDDEDSDVDNEIDGMMLDSGYTNEVDDLNNPGLSDDDQASLEFINSDQETDVD 482
             W + E D+ D              G   E DD+ + G  +++  S +    ++E + +
Sbjct: 427 AEWILDEGDESD--------------GEGGEYDDIQHEGFMEEE--SQDGSGEEEEEECE 486

Query: 483 SVMMDGEMTNEQKLDE----------IQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYR 542
           ++ + GE   +   DE          ++K K    E E FPDE+DTP D+ AR RF KYR
Sbjct: 487 TMTL-GESVRDDLYDEKVDAEDEERMLEKYKQERLE-EMFPDEMDTPRDVAARIRFQKYR 546

Query: 543 GLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHVLAKALEIEQGNRDDCVPSCSYLRL 602
           GLKSFRTS WDP+E+LP+DYARIF+F N   T+K +     EIE+   +       Y+ L
Sbjct: 547 GLKSFRTSPWDPKENLPRDYARIFQFQNFVNTRKRIFK---EIEEKEAEGAEVGW-YVTL 606

Query: 603 HVKEVPVGAASKLCELVKSMPITACGLLQHESKMSVLHFSIKKHDVSEEISDKVGNTENT 662
           HV +VPV       +     P+ A  LL +E KMSVL+  + ++          GNTE  
Sbjct: 607 HVSDVPVSVVEYFRQ---GAPLIAFSLLPYEQKMSVLNMVVSRNP---------GNTE-- 666

Query: 663 KMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFNSDKHKMERFLHGGRFSIASIYAP 722
                   P+K KE+L+FH GFR+F   P+FS  +  +DKHK +RFL      + +++AP
Sbjct: 667 --------PVKAKEELIFHCGFRRFRASPLFS-QHTAADKHKFQRFLTADAAFVVTVFAP 726

Query: 723 ISFAPLPLIVLRS-FNGNASFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMF 782
           I+F P  +++ +   NG  S  A+G L S+DP R+++K+++LSG+P ++    A VRYMF
Sbjct: 727 ITFPPASVLLFKQRRNGMHSLIATGHLFSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMF 776

Query: 783 HNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCVFNGVLQQHDTVCMSLYKRVYPKW 803
            N +DV WFKPV++ TK GRRG +KEP+GTHG MKC F+G L+  DTV M+LYKRV+PKW
Sbjct: 787 FNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKW 776

[Close]
BLAST of ClCG06G001320 vs. ExPASy Swiss-Prot
Match: Q9VP47 (Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster OX=7227 GN=Tsr1 PE=1 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.1e-101
Identity = 275/823 (33.41%), Postives = 429/823 (52.13%), Query Frame = 0 

Query: 3   GNRTQVNKPHKS-RFSSKA---TRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQ 62
           G   Q NK HK+ R  SK      Q+ K  L+  S   K    K  R  ++ +   +R+ 
Sbjct: 10  GPLKQANKAHKTGRHRSKGAIDNAQKGKIGLRPISHKHKQQQRKEQRRNQMNQ---LRKN 69

Query: 63  KRVAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSL---LTPGASSSTVASL- 122
           KR  VL+ KR   G  + P ++ L  +   +D     E L S    L    S S +  + 
Sbjct: 70  KREEVLEQKRKLGGQNTAPFLVCLLPMHEQIDPMSALEILKSCDSELVVENSPSGIVYIN 129

Query: 123 --EYKLRATVLKAPY--GDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLS 182
              +K R   +  P   G+    ++  KV D    + +A++   G   ++ D +G    +
Sbjct: 130 LPRFKQRFAFVTPPVGRGNELIALDYLKVCDTTLLLTTAAF---GDDEIF-DRWGQRIFN 189

Query: 183 VLRSLGLPSTAVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWL 242
           ++ + G+P+  V + DL +   KR    K     + S+   + K    DT  E    M  
Sbjct: 190 MMSAQGIPTPVVALMDLESINPKRRPAAKQAAQKVISKLLPEEKIMQLDTASEALNVMRR 249

Query: 243 FKEQRLTVPHWRNQRPYLMSQKVDML-ADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGA 302
              Q+  + H    RP+L    V+     + +    TL +TG+LR +SL+VN LVH+ G 
Sbjct: 250 IGGQKKRILHNVANRPHLFGDVVEFKPGSDPSDDLGTLEVTGFLRGQSLNVNGLVHIPGL 309

Query: 303 GDFQLCKIEVLKDPVPLNPRIGQDAMDTQDEEVVRLL---EPSEQEPLVVENEPDPLSGE 362
           GDFQL ++    DP  L+      + D ++ E VRLL   +PS++  L  EN PDP+  E
Sbjct: 310 GDFQLSQVVAPPDPYKLD-----KSRDGENSE-VRLLDRSDPSKRTSLQSENIPDPMDAE 369

Query: 363 QTWPTEADRAEAERNQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAW---EIGETDD 422
           QTWPTE + A ++   K+    KR +  G SEYQ      +  +   +     ++ E DD
Sbjct: 370 QTWPTEDEIAASQAETKKMKLVKR-VPKGYSEYQAAWIPDVEEVEDPDGKDDDDMSEDDD 429

Query: 423 EDSDVDNEIDGMMLDS-GYTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGEMT 482
           +D + DNE D M  D+  + +E +  ++     D +   + ++   E  ++    D +M 
Sbjct: 430 DDKEDDNE-DFMSCDNKSFEDEYEKRDS-----DTEEFQDTVSVASEAAINDEKYDQQMD 489

Query: 483 NEQKLDEIQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 542
            +++ + ++K++ A   D+ +PDE+DTP+D+PAR+RF KYRGL+SFRTS WD +E+LP D
Sbjct: 490 FQEERETLKKLQQART-DQLWPDEIDTPLDVPARERFQKYRGLESFRTSPWDAKENLPAD 549

Query: 543 YARIFEFNNISRTKKHVLAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGA--ASKLCELV 602
           YARI++F N  RTK+ +L +A E E       +P   Y+ L+V  VP     A K  +L+
Sbjct: 550 YARIYQFQNFDRTKRRILNEAKEFE-----GVLPGL-YVTLYVINVPESRWNAFKSAQLM 609

Query: 603 KSMPITACGLLQHESKMSVLHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLV 662
            +  I   G+L HE +M V++  +++   SE                    PLK KE+L+
Sbjct: 610 DN--IIVYGMLPHEHQMCVMNVVLQRMPDSE-------------------VPLKSKEQLI 669

Query: 663 FHVGFRQFVTRPIFSTDNFNSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLR-SFNG 722
              G+R+FV  PI+S  + N DKHK ER+        A+ YAPI F P P++  + + + 
Sbjct: 670 IQCGYRRFVVNPIYS-QHTNGDKHKFERYFRPYETVCATFYAPIQFPPAPVLAFKVNPDS 729

Query: 723 NASFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTK 782
             +  A G L S +P RI+LK+++LSG+P R+++  A++RYMF   +DV +FKPV + TK
Sbjct: 730 TLALVARGRLLSCNPDRIVLKRVVLSGHPMRINRKSASIRYMFFYKEDVEYFKPVKLRTK 783

Query: 783 CGRRGRVKEPVGTHGAMKCVFNGVLQQHDTVCMSLYKRVYPKW 803
           CGR G +KE +GTHG MKC F+G L+ +DT  M LYKRV+PKW
Sbjct: 790 CGRLGHIKESLGTHGHMKCYFDGQLRSYDTAFMYLYKRVFPKW 783

[Close]
BLAST of ClCG06G001320 vs. ExPASy TrEMBL
Match: A0A5A7T9F0 (Pre-rRNA-processing protein TSR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001780 PE=4 SV=1)

HSP 1 Score: 1477.2 bits (3823), Expect = 0.0e+00
Identity = 751/812 (92.49%), Postives = 772/812 (95.07%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGGNR QVNKPHKSRFS+KATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR
Sbjct: 1   MGGNRAQVNKPHKSRFSTKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKRA SGSKSPPRVIVLF LSASVDLNPLAE+LLSLL PGASSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRALSGSKSPPRVIVLFRLSASVDLNPLAEDLLSLLAPGASSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST
Sbjct: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AVLIRDLPTDIKK+NDYKKMCISSI+SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVLIRDLPTDIKKKNDYKKMCISSISSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WR QRPYLMSQKVDM+ADNC PG+CTLLLTGYLRARSLSVNQLVHVAGAGDFQL KIEVL
Sbjct: 241 WRTQRPYLMSQKVDMVADNCTPGRCTLLLTGYLRARSLSVNQLVHVAGAGDFQLSKIEVL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPR  QDAMDTQD+E++RLLEPSE EPLVVENEPDPLSGEQTWPTEADRAEA+R
Sbjct: 301 KDPVPLNPRTEQDAMDTQDDEIIRLLEPSEHEPLVVENEPDPLSGEQTWPTEADRAEADR 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSG 420
           NQKEK+ RKRALAHGTSEY             QEAWEIG+++DEDSDVDNE DGMMLDS 
Sbjct: 361 NQKEKHLRKRALAHGTSEY-------------QEAWEIGDSEDEDSDVDNETDGMMLDSS 420

Query: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGEMTNEQKLDEIQKIKNAHAED 480
           YTNEV+DLNN G+SDDDQASLEF NSDQETD+DSVM+DGEMTNEQKLDEIQKIKNAHAED
Sbjct: 421 YTNEVNDLNNQGISDDDQASLEFENSDQETDMDSVMLDGEMTNEQKLDEIQKIKNAHAED 480

Query: 481 EEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHVL 540
           EEFPDEVDTPMDIPARKRFAKYRGLKSFRTS+WDPQESLPQDYARIFEFNNISRT+KHVL
Sbjct: 481 EEFPDEVDTPMDIPARKRFAKYRGLKSFRTSTWDPQESLPQDYARIFEFNNISRTQKHVL 540

Query: 541 AKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSVL 600
           AKALEIEQGN D CV S SYLRLHVKEVPVGAASKLCEL KSMPITACGLLQHESKMSVL
Sbjct: 541 AKALEIEQGNCDHCVASGSYLRLHVKEVPVGAASKLCELAKSMPITACGLLQHESKMSVL 600

Query: 601 HFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN 660
           HFSIKKHDVSEEISDKVG TEN KM DKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN
Sbjct: 601 HFSIKKHDVSEEISDKVGTTENAKMPDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN 660

Query: 661 SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIILK 720
           SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRS  GNASFAASGSLKSIDPRRIILK
Sbjct: 661 SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSVEGNASFAASGSLKSIDPRRIILK 720

Query: 721 KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCVF 780
           KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGR+KEPVGTHGAMKCVF
Sbjct: 721 KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRIKEPVGTHGAMKCVF 780

Query: 781 NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 813
           NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA
Sbjct: 781 NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 799

[Close]
BLAST of ClCG06G001320 vs. ExPASy TrEMBL
Match: A0A6J1L0W3 (pre-rRNA-processing protein TSR1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498098 PE=4 SV=1)

HSP 1 Score: 1455.7 bits (3767), Expect = 0.0e+00
Identity = 738/812 (90.89%), Postives = 767/812 (94.46%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGG+R QVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQR+KMIREQKR
Sbjct: 1   MGGSRPQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRNKMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKRASSGSK+PPRVIVLFGLSASVDLNPLAE+LLSLL PG+SSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRASSGSKNPPRVIVLFGLSASVDLNPLAEDLLSLLAPGSSSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPYGDLQSCMEMAKVADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPST
Sbjct: 121 TVLKAPYGDLQSCMEMAKVADLIAFVTSASYYIEGSTSLYIDSFGSECLSLLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AV IRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVFIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WRNQRPYLMSQKVDM+ADNC  GKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLC+IEVL
Sbjct: 241 WRNQRPYLMSQKVDMVADNCTSGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCRIEVL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPR+ QDAMDT D EVV+LLEPSEQEPLVVEN+PDPLSGEQTWPTEADRAEA+R
Sbjct: 301 KDPVPLNPRMEQDAMDTHDVEVVQLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADR 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSG 420
           NQ+EK+ RKRALAHGTSEY             QEAWEIG+TDDEDSDVDNE DGMMLDSG
Sbjct: 361 NQREKHLRKRALAHGTSEY-------------QEAWEIGDTDDEDSDVDNESDGMMLDSG 420

Query: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGE-MTNEQKLDEIQKIKNAHAE 480
           YTNEVDDLNNP LSDDDQAS E INSD ETD+DSVMMDGE +TNEQK+DEIQKIKNAHA+
Sbjct: 421 YTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLTNEQKMDEIQKIKNAHAD 480

Query: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHV 540
           DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEF+NISRT+KHV
Sbjct: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFSNISRTQKHV 540

Query: 541 LAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSV 600
           LAKALE+EQGNRDDCV S SYLRLHVKEVP+GAASKLCEL KSMPITACGLLQHESKMSV
Sbjct: 541 LAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKSMPITACGLLQHESKMSV 600

Query: 601 LHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNF 660
           LHFSIK HDVSEEISD VG T+N+K HDK S PLKGKEKLVFHVGFRQFVTRPIFS+DNF
Sbjct: 601 LHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNF 660

Query: 661 NSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIIL 720
           NSDKHKMERFLH GRFSIASIYAPISFAPLPLIVLR+  G +SFAASGSLK IDPRRIIL
Sbjct: 661 NSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISSFAASGSLKCIDPRRIIL 720

Query: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCV 780
           KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKC+
Sbjct: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCI 780

Query: 781 FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 812
           FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD
Sbjct: 781 FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 799

[Close]
BLAST of ClCG06G001320 vs. ExPASy TrEMBL
Match: A0A6J1H8A7 (pre-rRNA-processing protein TSR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461047 PE=4 SV=1)

HSP 1 Score: 1453.3 bits (3761), Expect = 0.0e+00
Identity = 739/812 (91.01%), Postives = 765/812 (94.21%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGG+R QVNKPHKSRFSSKATRQQHKTSLKDRSKVT NNVAKGARAARLQR+KMIREQKR
Sbjct: 1   MGGSRAQVNKPHKSRFSSKATRQQHKTSLKDRSKVTTNNVAKGARAARLQRNKMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKRASSGSK+PPRVIVLFGLSASVDLNPLAE+LLSLL  G+SSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRASSGSKNPPRVIVLFGLSASVDLNPLAEDLLSLLASGSSSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPYGDLQSCMEMAKVADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPST
Sbjct: 121 TVLKAPYGDLQSCMEMAKVADLIAFVTSASYYIEGSTSLYIDSFGSECLSLLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AV IRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVFIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WRNQRPYLMSQKVDM+ADNC  GKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLC+IEVL
Sbjct: 241 WRNQRPYLMSQKVDMVADNCTSGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCRIEVL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPR  QDAMDT D EVV+LLEPSEQEPLVVEN+PDPLSGEQTWPTEADRAEA+R
Sbjct: 301 KDPVPLNPRTEQDAMDTHDVEVVQLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADR 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSG 420
           NQKEK+ RKRALAHGTSEY             QEAWEIG+TDDEDSDVDNE DGMMLDSG
Sbjct: 361 NQKEKHLRKRALAHGTSEY-------------QEAWEIGDTDDEDSDVDNESDGMMLDSG 420

Query: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGE-MTNEQKLDEIQKIKNAHAE 480
           YTNEVDDLNNP LSDDDQASLE INSD ETD+DSVMMDGE +TNEQKLDEIQKIKNAHA+
Sbjct: 421 YTNEVDDLNNPCLSDDDQASLELINSDHETDMDSVMMDGENLTNEQKLDEIQKIKNAHAD 480

Query: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHV 540
           DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEF+NISRT+KHV
Sbjct: 481 DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFSNISRTQKHV 540

Query: 541 LAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSV 600
           LAKALE+EQGNRDDCV S SYLRLHVKEVP+GAASKLCEL KSMPITACGLLQHESKMSV
Sbjct: 541 LAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKSMPITACGLLQHESKMSV 600

Query: 601 LHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNF 660
           LHFSIK HDVSEEISD VG T+N+K HDK S PLKGKEKLVFHVGFRQFVTRPIFS+DNF
Sbjct: 601 LHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNF 660

Query: 661 NSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIIL 720
           NSDKHKMERFLH GRFSIASIYAPISFAPLPLIVLR+  G +SFAASGSLK IDPRRIIL
Sbjct: 661 NSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISSFAASGSLKCIDPRRIIL 720

Query: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCV 780
           KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKC+
Sbjct: 721 KKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCI 780

Query: 781 FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 812
           FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD
Sbjct: 781 FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 799

[Close]
BLAST of ClCG06G001320 vs. ExPASy TrEMBL
Match: A0A0A0KDA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087900 PE=4 SV=1)

HSP 1 Score: 1430.6 bits (3702), Expect = 0.0e+00
Identity = 732/812 (90.15%), Postives = 756/812 (93.10%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGGNR QVNKPHKSRFSSKATRQQHKTSLKD+SKVTKNNVAKGARAARLQRSKMIREQKR
Sbjct: 1   MGGNRAQVNKPHKSRFSSKATRQQHKTSLKDKSKVTKNNVAKGARAARLQRSKMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKR  SGSKSPPRVIVLF LSASVDLNPLAE+LLSLL PGASSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRTLSGSKSPPRVIVLFRLSASVDLNPLAEDLLSLLAPGASSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST
Sbjct: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AVLIRDLPTDIKK+NDYKKMCISSI SEFPEDCKFY ADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVLIRDLPTDIKKKNDYKKMCISSINSEFPEDCKFYAADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WR QRPYLMSQKVDM+ADNC PGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQL KIEVL
Sbjct: 241 WRTQRPYLMSQKVDMVADNCTPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLSKIEVL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPR  QDAMDTQD+E++RLLEPSE EPLVVENEPDPLSGEQTWPTEADRAEAER
Sbjct: 301 KDPVPLNPRTEQDAMDTQDDEIIRLLEPSEHEPLVVENEPDPLSGEQTWPTEADRAEAER 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSDVDNEIDGMMLDSG 420
           NQKEK+ RKRALAHGTSEY             QEAW+IGE++DEDSDVDNE D MMLDS 
Sbjct: 361 NQKEKHLRKRALAHGTSEY-------------QEAWDIGESEDEDSDVDNETDCMMLDSS 420

Query: 421 YTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGEMTNEQKLDEIQKIKNAHAED 480
           YTNEV++LNN G+SDDDQASLEF N D+ETD+DSVMMD EMTNEQKLDEIQKIKNAHAED
Sbjct: 421 YTNEVNNLNNQGISDDDQASLEFENFDRETDMDSVMMDDEMTNEQKLDEIQKIKNAHAED 480

Query: 481 EEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKHVL 540
           EEFPDEVDTPMDIPARKRFA+YRGLKSFRTSSWDPQESLPQDYARIFEFNNI+RT+KHVL
Sbjct: 481 EEFPDEVDTPMDIPARKRFARYRGLKSFRTSSWDPQESLPQDYARIFEFNNIARTQKHVL 540

Query: 541 AKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMSVL 600
           AKALEIEQGN D CV SCSYLRLHVKEVPVGAA KLCEL KSMPITACGLLQHESKMSVL
Sbjct: 541 AKALEIEQGNGDHCVASCSYLRLHVKEVPVGAALKLCELAKSMPITACGLLQHESKMSVL 600

Query: 601 HFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN 660
           HFSIKKHDVSE         EN K+HDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN
Sbjct: 601 HFSIKKHDVSE---------ENAKIHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFN 660

Query: 661 SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRIILK 720
           SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVL++  GN SFAASGSLKSIDPRRIILK
Sbjct: 661 SDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLKNVEGNTSFAASGSLKSIDPRRIILK 720

Query: 721 KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCVF 780
           KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDV TK G+RGR+KEPVGTHGAMKCVF
Sbjct: 721 KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVSTKGGKRGRIKEPVGTHGAMKCVF 780

Query: 781 NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 813
           NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA
Sbjct: 781 NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 790

[Close]
BLAST of ClCG06G001320 vs. ExPASy TrEMBL
Match: A0A6J1GPU5 (LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456021 PE=4 SV=1)

HSP 1 Score: 1426.0 bits (3690), Expect = 0.0e+00
Identity = 732/814 (89.93%), Postives = 756/814 (92.87%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTKNNVAKGARAARLQRSKMIREQKR 60
           MGGNR QVNKPHKSRFSSKATRQQHKTSL DRSKVTKNNVAKGARAARLQ S MIREQKR
Sbjct: 1   MGGNRAQVNKPHKSRFSSKATRQQHKTSLTDRSKVTKNNVAKGARAARLQHSNMIREQKR 60

Query: 61  VAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLTPGASSSTVASLEYKLRA 120
            AVLQDKRA SGSKSPPRVIVL GLSASVDLNPLAE+LLSLLTPGASSSTVAS EYKLRA
Sbjct: 61  AAVLQDKRALSGSKSPPRVIVLLGLSASVDLNPLAEDLLSLLTPGASSSTVASSEYKLRA 120

Query: 121 TVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180
           TVLKAPY DLQSC EMAKVADLIAFV SASYYIEGSTSLYIDSFGSECLSVLRSLGLPST
Sbjct: 121 TVLKAPYSDLQSCNEMAKVADLIAFVVSASYYIEGSTSLYIDSFGSECLSVLRSLGLPST 180

Query: 181 AVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240
           AVLIRDLPTDIKKRNDYKK CISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH
Sbjct: 181 AVLIRDLPTDIKKRNDYKKTCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPH 240

Query: 241 WRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300
           WRNQRPYLMSQKVDM+ADNC PGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL
Sbjct: 241 WRNQRPYLMSQKVDMVADNCTPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVL 300

Query: 301 KDPVPLNPRIGQDAMDTQDEEVVRLLEPSEQEPLVVENEPDPLSGEQTWPTEADRAEAER 360
           KDPVPLNPRI QD+MDTQDEEVVRLLEPSEQEPLVVENE DPL    TWPTEADRAEA+R
Sbjct: 301 KDPVPLNPRIEQDSMDTQDEEVVRLLEPSEQEPLVVENELDPL----TWPTEADRAEADR 360

Query: 361 NQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDE-DSDVDNEIDGMMLDS 420
           +QKEK+ +K+ALAHGTS+Y             QEAWEIG TDDE DS+VDNE D M+LDS
Sbjct: 361 SQKEKHLKKKALAHGTSDY-------------QEAWEIGGTDDEDDSNVDNESDRMILDS 420

Query: 421 GYTNEVDDLNNPGLSDDDQASLEFINSDQETDVDSVMMDGE-MTNEQKLDEIQKIKNAHA 480
           GYTNE+DDLNNPGLSDDDQAS E INSDQETD+DSVMMDG+ +TNEQ+LDE +KIKNAHA
Sbjct: 421 GYTNEMDDLNNPGLSDDDQASFELINSDQETDMDSVMMDGDNLTNEQRLDEFRKIKNAHA 480

Query: 481 EDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFNNISRTKKH 540
           EDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEF+NISRT+KH
Sbjct: 481 EDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYARIFEFSNISRTQKH 540

Query: 541 VLAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVKSMPITACGLLQHESKMS 600
           VLAKALE E GNRDDCV SCSYLRLHV EVPV AASKLCEL KSMPITACGLL HESKMS
Sbjct: 541 VLAKALERENGNRDDCVASCSYLRLHVNEVPVCAASKLCELTKSMPITACGLLPHESKMS 600

Query: 601 VLHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDN 660
           VLHFSIKKHDVSE+ISDKVG TENTK HDKNSPPL GKEKLVFHVGFRQFVTRPIFSTDN
Sbjct: 601 VLHFSIKKHDVSEQISDKVGTTENTKKHDKNSPPLMGKEKLVFHVGFRQFVTRPIFSTDN 660

Query: 661 FNSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGNASFAASGSLKSIDPRRII 720
           FNSDKHKMERFLH GRFSIASI AP+SFAPLPLIVLR+  G +SFAASGSLKSIDPRRII
Sbjct: 661 FNSDKHKMERFLHAGRFSIASINAPVSFAPLPLIVLRNVEGISSFAASGSLKSIDPRRII 720

Query: 721 LKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKC 780
           LKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGR+KEPVGTHG MKC
Sbjct: 721 LKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRIKEPVGTHGVMKC 780

Query: 781 VFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 813
           V NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA
Sbjct: 781 VLNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDA 797

[Close]
BLAST of ClCG06G001320 vs. TAIR 10
Match: AT1G42440.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088 proteins in 291 species: Archae - 2; Bacteria - 131; Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49; Other Eukaryotes - 905 (source: NCBI BLink). )

HSP 1 Score: 1013.4 bits (2619), Expect = 9.8e-296
Identity = 534/829 (64.41%), Postives = 652/829 (78.65%), Query Frame = 0 

Query: 1   MGGNRTQVNKPHKSRFSSKATRQQHKTSLKDRSKVTK--NNVAKGARAARLQRSKMIREQ 60
           MG +R QVNK HK+RFSSK++R  H+T+L+D  ++ K  +N  KGA+AAR+QR KM+REQ
Sbjct: 1   MGRSRVQVNKAHKTRFSSKSSRNLHRTNLQDSGRIGKSDSNYVKGAKAARVQRGKMLREQ 60

Query: 61  KRVAVLQDKRASSGSKSPPRVIVLFGLSASVDLNPLAEELLSLLT---PGASSSTVASLE 120
           KR AVL++KRAS G  S PRVIVLF LSASV+LN L E++L LL+    G +SSTVAS E
Sbjct: 61  KRAAVLKEKRASGGINSAPRVIVLFPLSASVELNSLGEDVLKLLSSDGSGIASSTVASSE 120

Query: 121 YKLRATVLKAPYGDLQSCMEMAKVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSL 180
           YKLRATVLKAP+GDL +CMEMAKVADL+AFVASAS   E ++S +IDSFGS+CLSV RS+
Sbjct: 121 YKLRATVLKAPHGDLLTCMEMAKVADLMAFVASASAPWEENSSNFIDSFGSQCLSVFRSI 180

Query: 181 GLPSTAVLIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQR 240
           GLPST VLIRDLP+D+KK+N+ KKMC S + SEFPEDCKFYPADT+DELHKFMWLFK QR
Sbjct: 181 GLPSTTVLIRDLPSDVKKKNEMKKMCASQLASEFPEDCKFYPADTRDELHKFMWLFKAQR 240

Query: 241 LTVPHWRNQRPYLMSQKVDMLADNCNPGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLC 300
           LTVPHWR+QR Y++++K  ML D+ + GKCTLLL+GYLRAR LSVNQLVHV+G GDFQ  
Sbjct: 241 LTVPHWRSQRSYIVARKAGMLVDDESSGKCTLLLSGYLRARKLSVNQLVHVSGVGDFQFS 300

Query: 301 KIEVLKDPVPLNPRIGQDAM---DTQDEEVVRLL--EPSEQEPLVVENEPDPLSGEQTWP 360
           KIEVLKDP PLN R  Q++M   D+ DEEV++ L  +P +QEPLV+EN PDPL+GEQTWP
Sbjct: 301 KIEVLKDPFPLNERKNQNSMELDDSHDEEVLKSLVPDPMKQEPLVIENTPDPLAGEQTWP 360

Query: 361 TEADRAEAERNQKEKNSRKRALAHGTSEYQHHMCFPLLLLNTQEAWEIGETDDEDSD-VD 420
           TE + AEA++NQK+   +K+ L  GTSEY             Q AW + ETD+EDSD  D
Sbjct: 361 TEEEMAEADKNQKQGRLKKKTLPRGTSEY-------------QAAWIVDETDEEDSDNGD 420

Query: 421 NEIDGMMLDSGYTNEVDDLNNPGLSD----DDQASLEFINSDQETDVDSVMMDGE-MTNE 480
           ++ +GM+LD G     +D N  G+ D    DD  SL   + D ET  +S M+D E +T E
Sbjct: 421 SDDNGMVLDRG-----EDSNQEGMYDQEFEDDGKSLNLRDIDTETQNESEMVDDEDLTEE 480

Query: 481 QKLDEIQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYA 540
           Q  DEI+KIK A+A+DEEFPDEV+TP+D+PAR+RFAKYRGLKSFRTSSWDP ESLPQDYA
Sbjct: 481 QIKDEIKKIKEAYADDEEFPDEVETPIDVPARRRFAKYRGLKSFRTSSWDPNESLPQDYA 540

Query: 541 RIFEFNNISRTKKHVLAKALEIEQGNRDDCVPSCSYLRLHVKEVPVGAASKLCELVK-SM 600
           RIF F+N++RT+K VL +AL++E+ +RDDCVP  SY+RLH+KEVP+GAASKL  LV  + 
Sbjct: 541 RIFAFDNVARTQKLVLKQALKMEEEDRDDCVPIGSYVRLHIKEVPLGAASKLSSLVNTTK 600

Query: 601 PITACGLLQHESKMSVLHFSIKKHDVSEEISDKVGNTENTKMHDKNSPPLKGKEKLVFHV 660
           PI   GLLQHESKMSVLHFS+KK+D  E                    P+K KE+L+FHV
Sbjct: 601 PIIGFGLLQHESKMSVLHFSVKKYDGYE-------------------APIKTKEELMFHV 660

Query: 661 GFRQFVTRPIFSTDNFNSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSFNGN--A 720
           GFRQF+ RP+F+TDNF+SDKHKMERFLH G FS+ASIY PISF PLPL+VL+   G+   
Sbjct: 661 GFRQFIARPVFATDNFSSDKHKMERFLHPGCFSLASIYGPISFPPLPLVVLKISEGSDPP 720

Query: 721 SFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCG 780
           + AA GSLKS++P +IILKKIIL+GYPQRVSK+KA+VRYMFHNP+DV+WFKPV+VW+KCG
Sbjct: 721 AIAALGSLKSVEPNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCG 780

Query: 781 RRGRVKEPVGTHGAMKCVFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLL 811
           RRGRVKEPVGTHGAMKC+FNGV+QQHD VCM+LYKR YPKWPE L+P L
Sbjct: 781 RRGRVKEPVGTHGAMKCIFNGVVQQHDVVCMNLYKRAYPKWPERLYPQL 792

[Close]
BLAST of ClCG06G001320 vs. TAIR 10
Match: AT1G06720.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.0e-10
Identity = 61/268 (22.76%), Postives = 115/268 (42.91%), Query Frame = 0 

Query: 559 SYLRLHVKEVPVGAASKLCELVKSM----PITACGLLQHESKMSVLHFSIKKHDVSEEIS 618
           +YLRL +  VP        E+V+      PI   G+   E  +  +   +KKH       
Sbjct: 754 TYLRLEIHNVPY-------EMVEFFDPCHPILVGGIGFGEDNVGYMQARLKKH------- 813

Query: 619 DKVGNTENTKMHDKNSPPLKGKEKLVFHVGFRQFVTRPIFSTDNFNSDKHKMERFLHGGR 678
                    + H K    LK ++ ++  +G+R++ T P+F+ ++ N  +H+M ++     
Sbjct: 814 ---------RWHKK---VLKTRDPIIVSIGWRRYQTIPVFAIEDRNG-RHRMLKYTPEHM 873

Query: 679 FSIASIYAPISFAPLPLIVLRSFNGNAS---FAASGSLKSIDPRRIILKKIILSGYPQRV 738
             +AS + P+       +  ++ + N +     A+  +   + +  I+KKI L G P ++
Sbjct: 874 HCLASFWGPLVPPNTGFVAFQNLSNNQAGFRITATSVVLEFNHQARIVKKIKLVGTPCKI 933

Query: 739 SKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVK-------EPVGTHGAMKCVFNGVL 798
            K  A ++ MF +  ++  F+   V T  G RG+VK       +     G  +C F   +
Sbjct: 934 KKKTAFIKDMFTSDLEIARFEGSSVRTVSGIRGQVKKAGKNMLDNKAEEGIARCTFEDQI 992

Query: 799 QQHDTVCMSLYKRVYPKWPEHLFPLLDA 813
              D V +  +  V  + P+   PL  A
Sbjct: 994 HMSDMVFLRAWTTV--EVPQFYNPLTTA 992

The following BLAST results are available for this feature:
BLAST of ClCG06G001320 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875506.10.0e+0094.33pre-rRNA-processing protein TSR1 homolog [Benincasa hispida][more]
KAA0039900.10.0e+0092.49pre-rRNA-processing protein TSR1-like protein [Cucumis melo var. makuwa][more]
XP_023547507.10.0e+0091.51pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023547... [more]
XP_023513549.10.0e+0090.89pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023513... [more]
KAG6592850.10.0e+0090.89Pre-rRNA-processing protein TSR1-like protein, partial [Cucurbita argyrosperma s... [more]
BLAST of ClCG06G001320 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5XGY11.6e-12536.47Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis OX=8355 GN=tsr1 PE=2 ... [more]
Q5R4341.4e-12136.58Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii OX=9601 GN=TSR1 PE=2 SV... [more]
Q2NL821.5e-11836.46Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens OX=9606 GN=TSR1 PE=1 SV... [more]
Q5SWD92.2e-11435.12Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 S... [more]
Q9VP476.1e-10133.41Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster OX=7227 GN=T... [more]
BLAST of ClCG06G001320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T9F00.0e+0092.49Pre-rRNA-processing protein TSR1-like protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A6J1L0W30.0e+0090.89pre-rRNA-processing protein TSR1 homolog OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1H8A70.0e+0091.01pre-rRNA-processing protein TSR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A0A0KDA20.0e+0090.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087900 PE=4 SV=1[more]
A0A6J1GPU50.0e+0089.93LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog OS=Cucurbita mosch... [more]
BLAST of ClCG06G001320 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G42440.19.8e-29664.41FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCA... [more]
AT1G06720.11.0e-1022.76P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007034Ribosome biogenesis protein BMS1/TSR1, C-terminalSMARTSM01362DUF663_2coord: 486..798
e-value: 4.9E-149
score: 511.1
IPR007034Ribosome biogenesis protein BMS1/TSR1, C-terminalPFAMPF04950RIBIOP_Ccoord: 487..800
e-value: 2.4E-106
score: 355.4
IPR012948AARP2CNSMARTSM00785aarp2cn2coord: 223..304
e-value: 5.1E-24
score: 95.8
IPR012948AARP2CNPFAMPF08142AARP2CNcoord: 223..303
e-value: 2.4E-19
score: 69.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availablePANTHERPTHR12858:SF1PRE-RRNA-PROCESSING PROTEIN TSR1 HOMOLOGcoord: 2..804
IPR039761Ribosome biogenesis protein Bms1/Tsr1PANTHERPTHR12858RIBOSOME BIOGENESIS PROTEINcoord: 2..804
IPR030387Bms1/Tsr1-type G domainPROSITEPS51714G_BMS1coord: 76..237
score: 18.006895

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G001320.1ClCG06G001320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005730 nucleolus
cellular_component GO:0030688 preribosome, small subunit precursor
cellular_component GO:0005634 nucleus
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0034511 U3 snoRNA binding