ClCG05G019485 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G019485
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	leucine-rich repeat extensin-like protein 3
Location	CG_Chr05: 31740894 .. 31742582 (+)
RNA-Seq Expression	ClCG05G019485
Synteny	ClCG05G019485

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAAACAGCAACCAAAAACGAAAAACTCAACAAACTGGGGACCATTCCAATGGGGATCGGCTATATTCGGAAAACAACCATCGGCCACGGCGAAAAAGCCTCTCGAGCACCGAACCGACCAACCCCAGTCCGGTATAAAACCCCGCCGGAGTCCCCATTCATCTTCATCCCTTCCAAACAGCCCTTGGGCGTATCCAAGGTGGCGGCAATATTAGTATTTCAGTAGAAAAATAAATAAATAAGAAAAGAAAATGAAGGGTTTGGGCTACTGTTTGTTCATCTCTATTCTTCGTCTTCAATCTTCTCTTCCATTTTGTCATCGACCCTTTCCGATGCCGAAGCTTCTTTCATTGTCGACCGCCAACTTCTAACCCATCATGAAATCATGATTTTTCCGATGATTACGGTCCAAAGTCGAGGTTACTAAGACATTTTCCAGCCCCAGGCTCCGACGGGCTTTCATTGCTCTTCAAGCCTGGAAGCTTGCTATTTATTCAGACCCTTTAAACACCACCGCCGATTGGGTCTGCGCCGATGTCCGCTCCTACACCAGAGTTTTCTGCTCCCCTGCTCTCGACGATCCCAAACTCGAAGTCGTCGTCGGAATTGACCTTAACCATGCTGACATCGCCGGTTACTTGCCCGTCGAGCTCAATTTGCTGACCGACATTGCTCTATTTCACATCAACAACAACAGATTCTGCAGCATTGTCCCATCGAGCTTCTCCAAGCTTACTCTACTCCACGAGCTTGACATTAGCAACAACAGATTTGTAGGGCATTTCCCTAGAGTGGTTGTGAGAATCCCTAATTTGAAATATATGGACATCAAATACAATGATTTCGAAGTCAAATTGCCTCCTAAGCTTTTTACTAAGGAACTCGATGTCATTTTCCTAAACAATAATAGATTCACTTCTTACATTCTTGAAAATTTTGGGGAATCGACAGCGTCAGTGATTGTGATTGCCGACAACAATTTTACAGGATGTATTATAATGGACATTTCTTTGAATTTGTTGACTAGCGTTATGCAGGATGGTTTGTGCAATTTAGCCAAATTAGTTAATTTCACATTTTCTTACAATTTCTTCAATGGCAAGGTAATAGGTGTGTACCATAAAATAGGAAGGATGTTTTGTTGGATGATGCTGACAATTGCTTGAGGCAATAGACACTTGTACTCCGGTCACCAGGGATCGTCATTGTTGAATCCACAACCACCAACAAGAGGTTTATGTAACAATAGGACCTAAACACATCTCCAATCCCAGAACCCAAGGCACCAGAATCGTCGTCGGTATTAGAGCCCAAGGCACCAACACCTTCCTCTATTGACGATTCTTATGATCAGTCACCGGTCCCAAGATATCGCCCTCCTCCTCCACTTATAGTGCATTCCCCACCACCACTGGTCCACTCTCCCCCCAGTTTCATCATCCCCACCACCAGTTCACTCAGTTTCATCACCCCCACCACCAGTTCCTTCTCCACCACCACAGGGTTTCATCATCCCCACCACCGATTCACTCTCCACCACCATCGGTTTCATCACCCCACCACTAGTTCACTCTCCACCGCCACCAGTTTTCTCACCTCCCCCACCGGTTTACTCACCACCAGTTTTCTCACCACTGGTGTACGTACTCACCCCCACCATCAGTGCACTCACCTCTACCTCTAG

mRNA sequence

ATGGTGAAAACAGCAACCAAAAACGAAAAACTCAACAAACTGGGGACCATTCCAATGGGGATCGGCTATATTCGGAAAACAACCATCGGCCACGGCGAAAAAGCCTCTCGAGCACCGAACCGACCAACCCCAGTCCGGTATAAAACCCCGCCGGAGTCCCCATTCATCTTCATCCCTTCCAAACAGCCCTTGGGCGTATCCAAGACATTTTCCAGCCCCAGGCTCCGACGGGCTTTCATTGCTCTTCAAGCCTGGAAGCTTGCTATTTATTCAGACCCTTTAAACACCACCGCCGATTGGGTCTGCGCCGATGTCCGCTCCTACACCAGAGTTTTCTGCTCCCCTGCTCTCGACGATCCCAAACTCGAAGTCGTCGTCGGAATTGACCTTAACCATGCTGACATCGCCGGTTACTTGCCCGTCGAGCTCAATTTGCTGACCGACATTGCTCTATTTCACATCAACAACAACAGATTCTGCAGCATTGTCCCATCGAGCTTCTCCAAGCTTACTCTACTCCACGAGCTTGACATTAGCAACAACAGATTTGTAGGGCATTTCCCTAGAGTGGTTGTGAGAATCCCTAATTTGAAATATATGGACATCAAATACAATGATTTCGAAGTCAAATTGCCTCCTAAGCTTTTTACTAAGGAACTCGATGTCATTTTCCTAAACAATAATAGATTCACTTCTTACATTCTTGAAAATTTTGGGGAATCGACAGCGTCAGTGATTGTGATTGCCGACAACAATTTTACAGGATGTATTATAATGGACATTTCTTTGAATTTGTTGACTAGCGTTATGCAGGATGGTTTGTGCAATTTAGCCAAATTAGTTAATTTCACATTTTCTTACAATTTCTTCAATGGCAAGGACCTAAACACATCTCCAATCCCAGAACCCAAGGCACCAGAATCGTCGTCGGTATTAGAGCCCAAGGCACCAACACCTTCCTCTATTGACGATTCTTATGATCAGTCACCGGTCCCAAGATATCGCCCTCCTCCTCCACTTATAGTGCATTCCCCACCACCACTGGTCCACTCTCCCCCCAGTTTCATCATCCCCACCACCAGTTCACTCAGTTTCATCACCCCCACCACCAGTTCCTTCTCCACCACCACAGGGTTTCATCATCCCCACCACCGATTCACTCTCCACCACCATCGGTTTCATCACCCCACCACTAGTTCACTCTCCACCGCCACCAGTTTTCTCACCTCCCCCACCGGTTTACTCACCACCAGTTTTCTCACCACTGGTGTACGTACTCACCCCCACCATCAGTGCACTCACCTCTACCTCTAG

Coding sequence (CDS)

ATGGTGAAAACAGCAACCAAAAACGAAAAACTCAACAAACTGGGGACCATTCCAATGGGGATCGGCTATATTCGGAAAACAACCATCGGCCACGGCGAAAAAGCCTCTCGAGCACCGAACCGACCAACCCCAGTCCGGTATAAAACCCCGCCGGAGTCCCCATTCATCTTCATCCCTTCCAAACAGCCCTTGGGCGTATCCAAGACATTTTCCAGCCCCAGGCTCCGACGGGCTTTCATTGCTCTTCAAGCCTGGAAGCTTGCTATTTATTCAGACCCTTTAAACACCACCGCCGATTGGGTCTGCGCCGATGTCCGCTCCTACACCAGAGTTTTCTGCTCCCCTGCTCTCGACGATCCCAAACTCGAAGTCGTCGTCGGAATTGACCTTAACCATGCTGACATCGCCGGTTACTTGCCCGTCGAGCTCAATTTGCTGACCGACATTGCTCTATTTCACATCAACAACAACAGATTCTGCAGCATTGTCCCATCGAGCTTCTCCAAGCTTACTCTACTCCACGAGCTTGACATTAGCAACAACAGATTTGTAGGGCATTTCCCTAGAGTGGTTGTGAGAATCCCTAATTTGAAATATATGGACATCAAATACAATGATTTCGAAGTCAAATTGCCTCCTAAGCTTTTTACTAAGGAACTCGATGTCATTTTCCTAAACAATAATAGATTCACTTCTTACATTCTTGAAAATTTTGGGGAATCGACAGCGTCAGTGATTGTGATTGCCGACAACAATTTTACAGGATGTATTATAATGGACATTTCTTTGAATTTGTTGACTAGCGTTATGCAGGATGGTTTGTGCAATTTAGCCAAATTAGTTAATTTCACATTTTCTTACAATTTCTTCAATGGCAAGGACCTAAACACATCTCCAATCCCAGAACCCAAGGCACCAGAATCGTCGTCGGTATTAGAGCCCAAGGCACCAACACCTTCCTCTATTGACGATTCTTATGATCAGTCACCGGTCCCAAGATATCGCCCTCCTCCTCCACTTATAGTGCATTCCCCACCACCACTGGTCCACTCTCCCCCCAGTTTCATCATCCCCACCACCAGTTCACTCAGTTTCATCACCCCCACCACCAGTTCCTTCTCCACCACCACAGGGTTTCATCATCCCCACCACCGATTCACTCTCCACCACCATCGGTTTCATCACCCCACCACTAGTTCACTCTCCACCGCCACCAGTTTTCTCACCTCCCCCACCGGTTTACTCACCACCAGTTTTCTCACCACTGGTGTACGTACTCACCCCCACCATCAGTGCACTCACCTCTACCTCTAG

Protein sequence

MVKTATKNEKLNKLGTIPMGIGYIRKTTIGHGEKASRAPNRPTPVRYKTPPESPFIFIPSKQPLGVSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVIADNNFTGCIIMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSPIPEPKAPESSSVLEPKAPTPSSIDDSYDQSPVPRYRPPPPLIVHSPPPLVHSPPSFIIPTTSSLSFITPTTSSFSTTTGFHHPHHRFTLHHHRFHHPTTSSLSTATSFLTSPTGLLTTSFLTTGVRTHPHHQCTHLYL

Homology

[Close]

BLAST of ClCG05G019485 vs. NCBI nr
Match: XP_038899496.1 (LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3 [Benincasa hispida])

HSP 1 Score: 372.5 bits (955), Expect = 5.1e-99
Identity = 210/363 (57.85%), Postives = 239/363 (65.84%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TFSSPRLRRA+IALQAWKLAIYSDPLNTTA+WV  DV SYT VFC+PALDDPKLEVV
Sbjct: 58  VNETFSSPRLRRAYIALQAWKLAIYSDPLNTTANWVGPDVCSYTGVFCAPALDDPKLEVV 117

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLN  DIAGYLPVEL LLTDIALFHIN+NRFC IVP SFSKLTLL+ELDISNNRFVG
Sbjct: 118 AGIDLNEGDIAGYLPVELGLLTDIALFHINSNRFCGIVPFSFSKLTLLYELDISNNRFVG 177

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
           HFP VVVRIPNLKY+DI+YNDFE +LP +LFTKELD IFLNNNRFTS+I E+FG+S ASV
Sbjct: 178 HFPEVVVRIPNLKYLDIRYNDFEGELPSELFTKELDAIFLNNNRFTSFIPESFGDSPASV 237

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 238 IVIANNNFTGCIPSSIGKMGNTLKQLIMLNNGLVGCLPSEIGMLGNATVLDVSSNQLSGI 297

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGK------------ 354
                       IMDIS NLLT V+Q+GLCNL KLVN TFSYNFFNG+            
Sbjct: 298 LPKSFDGLKNVEIMDISSNLLTGVVQEGLCNLPKLVNLTFSYNFFNGEADRCVPQNRKDV 357

[Close]

BLAST of ClCG05G019485 vs. NCBI nr
Match: XP_022139844.1 (pollen-specific leucine-rich repeat extensin-like protein 3, partial [Momordica charantia])

HSP 1 Score: 364.0 bits (933), Expect = 1.8e-96
Identity = 208/404 (51.49%), Postives = 238/404 (58.91%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TFSSPRLRRA+IALQAWK+AIYSDPLNTTA W+ ADV SYT VFC+PALDDPKLEVV
Sbjct: 57  VNETFSSPRLRRAYIALQAWKMAIYSDPLNTTASWIGADVCSYTGVFCAPALDDPKLEVV 116

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLNHADIAGYLPVEL LLTDIALFHIN+NRFC I+P+SF +LTLL+E DISNNRFVG
Sbjct: 117 AGIDLNHADIAGYLPVELGLLTDIALFHINSNRFCGIIPTSFWRLTLLYEFDISNNRFVG 176

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
           HFP VVVRIPNLKY+D+++NDFE +LP  LFTKELD IFLNNNRFTS I ENFG+S ASV
Sbjct: 177 HFPEVVVRIPNLKYLDLRFNDFEGELPSSLFTKELDAIFLNNNRFTSNIPENFGDSPASV 236

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 237 IVIANNNFTGCIPSSIGKMGNTLKEFVMLNNGLAGCIPGEIGLLGNATVVDVSYNKLSGI 296

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSP------ 340
                        +DIS N LT  + +G+CNL KLVNFTFS NFFNG+  +  P      
Sbjct: 297 LPKSFDGLKGVEALDISGNSLTGFVAEGVCNLPKLVNFTFSNNFFNGEAESCVPQNRKNI 356

[Close]

BLAST of ClCG05G019485 vs. NCBI nr
Match: XP_022139800.1 (pollen-specific leucine-rich repeat extensin-like protein 3 isoform X2 [Momordica charantia])

HSP 1 Score: 341.3 bits (874), Expect = 1.3e-89
Identity = 208/412 (50.49%), Postives = 245/412 (59.47%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TFSSPRLRRA+IALQAWK+ IYSDPLNTTA+WV ADV SYT VFC+PALDDP+LEVV
Sbjct: 57  VNETFSSPRLRRAYIALQAWKMTIYSDPLNTTANWVGADVCSYTGVFCAPALDDPELEVV 116

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLNHADIAGYLPVEL LLTDIALFHIN+NRFC IVP+SF +LTLL+E DISNNRFVG
Sbjct: 117 AGIDLNHADIAGYLPVELGLLTDIALFHINSNRFCGIVPTSFWRLTLLYEFDISNNRFVG 176

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
           +FP VV+RIPNLKY+D+++NDFE +LPP LFTKELD IFLNNNRFTS I ENFG+S ASV
Sbjct: 177 NFPEVVIRIPNLKYLDLRFNDFEGELPPTLFTKELDAIFLNNNRFTSNIPENFGDSPASV 236

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 237 IVIANNNFTGCIPSSIGKMGNTLKEFVMLNNGLAGCIPGEIGLLGNATVVDVSYNKLSGI 296

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSP------ 365
                        +DIS N LT  + +G+CNL KLVNFTFS NFFNG+  +  P      
Sbjct: 297 LPKSFDGLKGVEALDISGNSLTGFVAEGVCNLPKLVNFTFSNNFFNGEAESCVPHNKKNI 356

Query: 366 -----------IPEPKAPE-SSSVL---------------EPKAPTPS-SIDDSYDQSPV 383
                       P  K  E  +SV+                P +PT S S+    +Q P 
Sbjct: 357 VLDDSSNCLSKRPNQKTTEICTSVIHKTVDCGKAKCGGGSSPPSPTTSTSMPPKPEQPPP 416

[Close]

BLAST of ClCG05G019485 vs. NCBI nr
Match: XP_022139791.1 (pollen-specific leucine-rich repeat extensin-like protein 3 isoform X1 [Momordica charantia])

HSP 1 Score: 340.9 bits (873), Expect = 1.6e-89
Identity = 209/412 (50.73%), Postives = 244/412 (59.22%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TFSSPRLRRA+IALQAWK+ IYSDPLNTTA+WV ADV SYT VFC+PALD+PKLEVV
Sbjct: 57  VNETFSSPRLRRAYIALQAWKMTIYSDPLNTTANWVGADVCSYTGVFCAPALDNPKLEVV 116

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLNHADIAGYLPVEL LLTDIALFHIN+NRFC IVP+SF +LTLL+E DISNNRFVG
Sbjct: 117 AGIDLNHADIAGYLPVELGLLTDIALFHINSNRFCGIVPTSFWRLTLLYEFDISNNRFVG 176

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
           HFP VVVRIPNLKY+D+++NDFE +LP  LFTKELD IFLNNNRFTS I ENFG+S ASV
Sbjct: 177 HFPEVVVRIPNLKYLDLRFNDFEGELPSTLFTKELDAIFLNNNRFTSNIPENFGDSPASV 236

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 237 IVIANNNFTGCIPSSIGKMGNTLKEFVMLNNGLAGCIPGEIGLLGNATVVDVSYNKLSGI 296

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSP------ 365
                        +DIS N LT  + +G+CNL KLVNFTFS NFFNG+  +  P      
Sbjct: 297 LPKSFDGLKGVEALDISGNSLTGFVAEGVCNLPKLVNFTFSNNFFNGEAESCVPHNKKNI 356

Query: 366 -----------IPEPKAPE-SSSVL---------------EPKAPTPS-SIDDSYDQSPV 383
                       P  K  E  +SV+                P +PT S S+    +Q P 
Sbjct: 357 VLDDSSNCLSKRPNQKTTEICTSVIHKTVDCGKAKCGGGSSPPSPTTSTSMPPKPEQPPP 416

[Close]

BLAST of ClCG05G019485 vs. NCBI nr
Match: XP_022981727.1 (pollen-specific leucine-rich repeat extensin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 334.3 bits (856), Expect = 1.5e-87
Identity = 196/384 (51.04%), Postives = 232/384 (60.42%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TF + RLRRAFIALQAWK +IYSDPLNTTA+WV ADV SYT VFC+ ALDDP ++VV
Sbjct: 57  VTETFPNSRLRRAFIALQAWKRSIYSDPLNTTANWVGADVCSYTGVFCTSALDDPNVQVV 116

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLNHADIAGYLPVEL LL+DIALFHIN NRFC +VP SF ++ LLHELD+SNNRFVG
Sbjct: 117 AGIDLNHADIAGYLPVELGLLSDIALFHINTNRFCGLVPPSFERMILLHELDVSNNRFVG 176

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
            FP VV+RIPNLK++DI++NDFE KLPP LFTKELD IFLNNNRFTS+I E+FG+S ASV
Sbjct: 177 PFPEVVLRIPNLKFLDIRFNDFEGKLPPALFTKELDAIFLNNNRFTSHIPESFGDSPASV 236

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 237 IVIANNNFTGCIPTSIGKMGNTLNEVLMLNNALGGCIPGELSLLGNATIFDVSSNQLSGS 296

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKD----------- 354
                       I+D+S N LT V+  GLCNL KL  FTF+ N F+G+D           
Sbjct: 297 LPMSLHGLKNVEIIDVSSNSLTGVVHGGLCNLPKLAEFTFADNLFDGEDTRCVPQNRQDV 356

[Close]

BLAST of ClCG05G019485 vs. ExPASy Swiss-Prot
Match: Q9LJ64 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 8.2e-76
Identity = 148/289 (51.21%), Postives = 178/289 (61.59%), Query Frame = 0


Query: 70  FSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGID 129
           F++ RL+RA+IALQAWK A YSDP NT A+WV  DV SY  VFC+PALDDP + VV GID
Sbjct: 67  FANNRLKRAYIALQAWKKAFYSDPFNTAANWVGPDVCSYKGVFCAPALDDPSVLVVAGID 126

Query: 130 LNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFPR 189
           LNHADIAGYLP EL LLTD+ALFH+N+NRFC ++P S SKLTL++E D+SNNRFVG FP 
Sbjct: 127 LNHADIAGYLPPELGLLTDVALFHVNSNRFCGVIPKSLSKLTLMYEFDVSNNRFVGPFPT 186

Query: 190 VVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVIA 249
           V +  P+LK++DI+YNDFE KLPP++F K+LD IFLNNNRF S I E  G+STASV+  A
Sbjct: 187 VALSWPSLKFLDIRYNDFEGKLPPEIFDKDLDAIFLNNNRFESTIPETIGKSTASVVTFA 246

Query: 250 DNNFTGCI---------------------------------------------------- 300
            N F+GCI                                                    
Sbjct: 247 HNKFSGCIPKTIGQMKNLNEIVFIGNNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTL 306

[Close]

BLAST of ClCG05G019485 vs. ExPASy Swiss-Prot
Match: Q9XIL9 (Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PEX3 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.6e-71
Identity = 167/411 (40.63%), Postives = 218/411 (53.04%), Query Frame = 0


Query: 69  TFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGI 128
           TF++ RL+RA+IALQAWK A+YSDP NTT +W    V  YT VFC+PALDDP + VV G+
Sbjct: 54  TFANHRLKRAYIALQAWKKAVYSDPFNTTGNWHGPHVCGYTGVFCAPALDDPDVAVVAGV 113

Query: 129 DLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFP 188
           DLN ADIAG+LP EL L+TD+A+FH+N+NRFC I+P SF KL+L+HE D+SNNRFVG FP
Sbjct: 114 DLNGADIAGHLPAELGLMTDVAMFHLNSNRFCGIIPKSFEKLSLMHEFDVSNNRFVGPFP 173

Query: 189 RVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVI 248
            VV+  P +K++D++YNDFE ++PP+LF K+LD IFLNNNRFTS I ++ GES+ASV+  
Sbjct: 174 SVVLSWPAVKFIDVRYNDFEGQVPPELFKKDLDAIFLNNNRFTSTIPDSLGESSASVVTF 233

Query: 249 ADNNFTGCI--------------------------------------------------- 308
           A N F+GCI                                                   
Sbjct: 234 AHNKFSGCIPRSIGNMKNLNEIIFKDNSLGGCFPSEIGKLANVNVFDASMNSFTGVLPPS 293

Query: 309 --------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSP---------- 363
                     DIS N LT  + + +C L KLVN T++YN+FNG+  +  P          
Sbjct: 294 FVGLTSMEEFDISGNKLTGFIPENICKLPKLVNLTYAYNYFNGQGDSCVPGSQKQIALDD 353

[Close]

BLAST of ClCG05G019485 vs. ExPASy Swiss-Prot
Match: O81765 (Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=PEX4 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 5.7e-69
Identity = 157/368 (42.66%), Postives = 201/368 (54.62%), Query Frame = 0


Query: 69  TFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGI 128
           TF++ RL+RA+IALQAWK AI+SDP NTT +W    V  YT V C+PALDD  + VV G+
Sbjct: 80  TFANTRLKRAYIALQAWKKAIFSDPFNTTGNWHGPHVCGYTGVVCAPALDDSDVTVVAGV 139

Query: 129 DLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFP 188
           DLN ADIAG+LP EL L+TD+A+FH+N+NRFC I+P SF KL L+HE D+SNNRFVG FP
Sbjct: 140 DLNGADIAGHLPAELGLMTDVAMFHLNSNRFCGIIPKSFEKLKLMHEFDVSNNRFVGPFP 199

Query: 189 RVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVI 248
            VV+  P++KY D+++NDFE ++PP+LF KELD IFLN+NRFTS I E+ GES ASV+  
Sbjct: 200 NVVLSWPDVKYFDLRFNDFEGQVPPELFKKELDAIFLNDNRFTSVIPESLGESPASVVTF 259

Query: 249 ADNNFTGCI--------------------------------------------------- 308
           A+N FTGCI                                                   
Sbjct: 260 ANNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTS 319

Query: 309 --------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSPIPEPK----- 361
                    +DIS N LT ++   +C L  LVN T+SYN+F+G+  +  P    K     
Sbjct: 320 FVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLTYSYNYFSGQGGSCVPGGSRKEIALD 379

[Close]

BLAST of ClCG05G019485 vs. ExPASy Swiss-Prot
Match: Q9XIB6 (Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 9.7e-69
Identity = 136/283 (48.06%), Postives = 171/283 (60.42%), Query Frame = 0


Query: 70  FSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGID 129
           F + RL+RA+IALQAWK AIYSDP  TTA+WV +DV SY  V+C+PALDD  L VV G+D
Sbjct: 54  FENDRLKRAYIALQAWKKAIYSDPFKTTANWVGSDVCSYNGVYCAPALDDDSLTVVAGVD 113

Query: 130 LNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFPR 189
           LNHADIAG+LP EL L+TD+ALFHIN+NRFC I+P S SKL L++E D+SNNRFVG FP 
Sbjct: 114 LNHADIAGHLPPELGLMTDLALFHINSNRFCGIIPKSLSKLALMYEFDVSNNRFVGQFPE 173

Query: 190 VVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVIA 249
           V +  P+LK++D++YN+FE  LP ++F K+LD IFLNNNRF S I    G+S ASV+  A
Sbjct: 174 VSLSWPSLKFLDLRYNEFEGSLPSEIFDKDLDAIFLNNNRFESVIPGTIGKSKASVVTFA 233

Query: 250 DNNFTGCI---------------------------------------------------- 294
           +N F+GCI                                                    
Sbjct: 234 NNKFSGCIPKSIGNMKNLNEIVFTGNNLTGCFPNEIGLLNNVTVFDASKNGFVGSLPSTL 293

[Close]

BLAST of ClCG05G019485 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.1e-67
Identity = 147/354 (41.53%), Postives = 200/354 (56.50%), Query Frame = 0


Query: 67  SKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVV 126
           S  F +PRLR A+IALQAWK AI SDP N T++W+ ++V +YT VFCSPALD+ K+  V 
Sbjct: 58  SLNFENPRLRNAYIALQAWKQAILSDPNNFTSNWIGSNVCNYTGVFCSPALDNRKIRTVA 117

Query: 127 GIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGH 186
           GIDLNHADIAGYLP EL LL+D+ALFH+N+NRFC  VP  F++L LL ELD+SNNRF G 
Sbjct: 118 GIDLNHADIAGYLPEELGLLSDLALFHVNSNRFCGTVPHRFNRLKLLFELDLSNNRFAGK 177

Query: 187 FPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVI 246
           FP VV+++P+LK++D+++N+FE  +P +LF+K+LD IF+N+NRF   + ENFG+S  SVI
Sbjct: 178 FPTVVLQLPSLKFLDLRFNEFEGTVPKELFSKDLDAIFINHNRFRFELPENFGDSPVSVI 237

Query: 247 VIADNNFTGCI-----------------------------------IMDISL-------- 306
           V+A+N F GC+                                   + D+S         
Sbjct: 238 VLANNRFHGCVPSSLVEMKNLNEIIFMNNGLNSCLPSDIGRLKNVTVFDVSFNELVGPLP 297

Query: 307 ----------------NLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSPIPEPKAPE 354
                           N+L+  +   +C L KL NFT+SYNFF G+      +PE     
Sbjct: 298 ESVGEMVSVEQLNVAHNMLSGKIPASICQLPKLENFTYSYNFFTGEAPVCLRLPEFDDRR 357

[Close]

BLAST of ClCG05G019485 vs. ExPASy TrEMBL
Match: A0A6J1CE38 (pollen-specific leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111010655 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 8.8e-97
Identity = 208/404 (51.49%), Postives = 238/404 (58.91%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TFSSPRLRRA+IALQAWK+AIYSDPLNTTA W+ ADV SYT VFC+PALDDPKLEVV
Sbjct: 57  VNETFSSPRLRRAYIALQAWKMAIYSDPLNTTASWIGADVCSYTGVFCAPALDDPKLEVV 116

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLNHADIAGYLPVEL LLTDIALFHIN+NRFC I+P+SF +LTLL+E DISNNRFVG
Sbjct: 117 AGIDLNHADIAGYLPVELGLLTDIALFHINSNRFCGIIPTSFWRLTLLYEFDISNNRFVG 176

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
           HFP VVVRIPNLKY+D+++NDFE +LP  LFTKELD IFLNNNRFTS I ENFG+S ASV
Sbjct: 177 HFPEVVVRIPNLKYLDLRFNDFEGELPSSLFTKELDAIFLNNNRFTSNIPENFGDSPASV 236

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 237 IVIANNNFTGCIPSSIGKMGNTLKEFVMLNNGLAGCIPGEIGLLGNATVVDVSYNKLSGI 296

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSP------ 340
                        +DIS N LT  + +G+CNL KLVNFTFS NFFNG+  +  P      
Sbjct: 297 LPKSFDGLKGVEALDISGNSLTGFVAEGVCNLPKLVNFTFSNNFFNGEAESCVPQNRKNI 356

[Close]

BLAST of ClCG05G019485 vs. ExPASy TrEMBL
Match: A0A6J1CDB3 (pollen-specific leucine-rich repeat extensin-like protein 3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010618 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 6.1e-90
Identity = 208/412 (50.49%), Postives = 245/412 (59.47%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TFSSPRLRRA+IALQAWK+ IYSDPLNTTA+WV ADV SYT VFC+PALDDP+LEVV
Sbjct: 57  VNETFSSPRLRRAYIALQAWKMTIYSDPLNTTANWVGADVCSYTGVFCAPALDDPELEVV 116

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLNHADIAGYLPVEL LLTDIALFHIN+NRFC IVP+SF +LTLL+E DISNNRFVG
Sbjct: 117 AGIDLNHADIAGYLPVELGLLTDIALFHINSNRFCGIVPTSFWRLTLLYEFDISNNRFVG 176

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
           +FP VV+RIPNLKY+D+++NDFE +LPP LFTKELD IFLNNNRFTS I ENFG+S ASV
Sbjct: 177 NFPEVVIRIPNLKYLDLRFNDFEGELPPTLFTKELDAIFLNNNRFTSNIPENFGDSPASV 236

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 237 IVIANNNFTGCIPSSIGKMGNTLKEFVMLNNGLAGCIPGEIGLLGNATVVDVSYNKLSGI 296

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSP------ 365
                        +DIS N LT  + +G+CNL KLVNFTFS NFFNG+  +  P      
Sbjct: 297 LPKSFDGLKGVEALDISGNSLTGFVAEGVCNLPKLVNFTFSNNFFNGEAESCVPHNKKNI 356

Query: 366 -----------IPEPKAPE-SSSVL---------------EPKAPTPS-SIDDSYDQSPV 383
                       P  K  E  +SV+                P +PT S S+    +Q P 
Sbjct: 357 VLDDSSNCLSKRPNQKTTEICTSVIHKTVDCGKAKCGGGSSPPSPTTSTSMPPKPEQPPP 416

[Close]

BLAST of ClCG05G019485 vs. ExPASy TrEMBL
Match: A0A6J1CDS3 (pollen-specific leucine-rich repeat extensin-like protein 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010618 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 7.9e-90
Identity = 209/412 (50.73%), Postives = 244/412 (59.22%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TFSSPRLRRA+IALQAWK+ IYSDPLNTTA+WV ADV SYT VFC+PALD+PKLEVV
Sbjct: 57  VNETFSSPRLRRAYIALQAWKMTIYSDPLNTTANWVGADVCSYTGVFCAPALDNPKLEVV 116

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLNHADIAGYLPVEL LLTDIALFHIN+NRFC IVP+SF +LTLL+E DISNNRFVG
Sbjct: 117 AGIDLNHADIAGYLPVELGLLTDIALFHINSNRFCGIVPTSFWRLTLLYEFDISNNRFVG 176

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
           HFP VVVRIPNLKY+D+++NDFE +LP  LFTKELD IFLNNNRFTS I ENFG+S ASV
Sbjct: 177 HFPEVVVRIPNLKYLDLRFNDFEGELPSTLFTKELDAIFLNNNRFTSNIPENFGDSPASV 236

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 237 IVIANNNFTGCIPSSIGKMGNTLKEFVMLNNGLAGCIPGEIGLLGNATVVDVSYNKLSGI 296

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSP------ 365
                        +DIS N LT  + +G+CNL KLVNFTFS NFFNG+  +  P      
Sbjct: 297 LPKSFDGLKGVEALDISGNSLTGFVAEGVCNLPKLVNFTFSNNFFNGEAESCVPHNKKNI 356

Query: 366 -----------IPEPKAPE-SSSVL---------------EPKAPTPS-SIDDSYDQSPV 383
                       P  K  E  +SV+                P +PT S S+    +Q P 
Sbjct: 357 VLDDSSNCLSKRPNQKTTEICTSVIHKTVDCGKAKCGGGSSPPSPTTSTSMPPKPEQPPP 416

[Close]

BLAST of ClCG05G019485 vs. ExPASy TrEMBL
Match: A0A6J1IUT2 (pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111480794 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 7.4e-88
Identity = 196/384 (51.04%), Postives = 232/384 (60.42%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TF + RLRRAFIALQAWK +IYSDPLNTTA+WV ADV SYT VFC+ ALDDP ++VV
Sbjct: 57  VTETFPNSRLRRAFIALQAWKRSIYSDPLNTTANWVGADVCSYTGVFCTSALDDPNVQVV 116

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLNHADIAGYLPVEL LL+DIALFHIN NRFC +VP SF ++ LLHELD+SNNRFVG
Sbjct: 117 AGIDLNHADIAGYLPVELGLLSDIALFHINTNRFCGLVPPSFERMILLHELDVSNNRFVG 176

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
            FP VV+RIPNLK++DI++NDFE KLPP LFTKELD IFLNNNRFTS+I E+FG+S ASV
Sbjct: 177 PFPEVVLRIPNLKFLDIRFNDFEGKLPPALFTKELDAIFLNNNRFTSHIPESFGDSPASV 236

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 237 IVIANNNFTGCIPTSIGKMGNTLNEVLMLNNALGGCIPGELSLLGNATIFDVSSNQLSGS 296

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKD----------- 354
                       I+D+S N LT V+  GLCNL KL  FTF+ N F+G+D           
Sbjct: 297 LPMSLHGLKNVEIIDVSSNSLTGVVHGGLCNLPKLAEFTFADNLFDGEDTRCVPQNRQDV 356

[Close]

BLAST of ClCG05G019485 vs. ExPASy TrEMBL
Match: A0A6J1FS13 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111446709 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.2e-85
Identity = 190/368 (51.63%), Postives = 224/368 (60.87%), Query Frame = 0


Query: 66  VSKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVV 125
           V++TF + RLRRAFIALQAWK +IYSDPLNTTA+WV ADV SYT VFC+ ALDDP ++VV
Sbjct: 57  VTETFPNSRLRRAFIALQAWKRSIYSDPLNTTANWVGADVCSYTGVFCTSALDDPNVQVV 116

Query: 126 VGIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVG 185
            GIDLNHADIAGYLPVEL LL+DIALFHIN+NRFC ++P SF ++ LLHELD+SNNRFVG
Sbjct: 117 AGIDLNHADIAGYLPVELGLLSDIALFHINSNRFCGLIPPSFERMILLHELDVSNNRFVG 176

Query: 186 HFPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASV 245
            FP VV+RIPNLK++DI++NDFE KLPP LFTKELD IFLNNNRFTS+I ENFG+S ASV
Sbjct: 177 PFPEVVLRIPNLKFLDIRFNDFEGKLPPALFTKELDAIFLNNNRFTSHIPENFGDSPASV 236

Query: 246 IVIADNNFTGCI------------------------------------------------ 305
           IVIA+NNFTGCI                                                
Sbjct: 237 IVIANNNFTGCIPTSIGKMGNTLNEVLMLNNALGGCIPGELALLGNATVFDVSSNQLSGS 296

Query: 306 ------------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSP------ 354
                       I+D+S N LT V+  G+CNL KL  FTF+ N F+G+D    P      
Sbjct: 297 LPMSLGGLKKVEIIDVSSNSLTGVVHGGVCNLPKLAVFTFADNLFDGEDNRCVPQNRQDV 356

[Close]

BLAST of ClCG05G019485 vs. TAIR 10
Match: AT3G19020.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 285.8 bits (730), Expect = 5.8e-77
Identity = 148/289 (51.21%), Postives = 178/289 (61.59%), Query Frame = 0


Query: 70  FSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGID 129
           F++ RL+RA+IALQAWK A YSDP NT A+WV  DV SY  VFC+PALDDP + VV GID
Sbjct: 67  FANNRLKRAYIALQAWKKAFYSDPFNTAANWVGPDVCSYKGVFCAPALDDPSVLVVAGID 126

Query: 130 LNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFPR 189
           LNHADIAGYLP EL LLTD+ALFH+N+NRFC ++P S SKLTL++E D+SNNRFVG FP 
Sbjct: 127 LNHADIAGYLPPELGLLTDVALFHVNSNRFCGVIPKSLSKLTLMYEFDVSNNRFVGPFPT 186

Query: 190 VVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVIA 249
           V +  P+LK++DI+YNDFE KLPP++F K+LD IFLNNNRF S I E  G+STASV+  A
Sbjct: 187 VALSWPSLKFLDIRYNDFEGKLPPEIFDKDLDAIFLNNNRFESTIPETIGKSTASVVTFA 246

Query: 250 DNNFTGCI---------------------------------------------------- 300
            N F+GCI                                                    
Sbjct: 247 HNKFSGCIPKTIGQMKNLNEIVFIGNNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTL 306

[Close]

BLAST of ClCG05G019485 vs. TAIR 10
Match: AT2G15880.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-72
Identity = 167/411 (40.63%), Postives = 218/411 (53.04%), Query Frame = 0


Query: 69  TFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGI 128
           TF++ RL+RA+IALQAWK A+YSDP NTT +W    V  YT VFC+PALDDP + VV G+
Sbjct: 54  TFANHRLKRAYIALQAWKKAVYSDPFNTTGNWHGPHVCGYTGVFCAPALDDPDVAVVAGV 113

Query: 129 DLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFP 188
           DLN ADIAG+LP EL L+TD+A+FH+N+NRFC I+P SF KL+L+HE D+SNNRFVG FP
Sbjct: 114 DLNGADIAGHLPAELGLMTDVAMFHLNSNRFCGIIPKSFEKLSLMHEFDVSNNRFVGPFP 173

Query: 189 RVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVI 248
            VV+  P +K++D++YNDFE ++PP+LF K+LD IFLNNNRFTS I ++ GES+ASV+  
Sbjct: 174 SVVLSWPAVKFIDVRYNDFEGQVPPELFKKDLDAIFLNNNRFTSTIPDSLGESSASVVTF 233

Query: 249 ADNNFTGCI--------------------------------------------------- 308
           A N F+GCI                                                   
Sbjct: 234 AHNKFSGCIPRSIGNMKNLNEIIFKDNSLGGCFPSEIGKLANVNVFDASMNSFTGVLPPS 293

Query: 309 --------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSP---------- 363
                     DIS N LT  + + +C L KLVN T++YN+FNG+  +  P          
Sbjct: 294 FVGLTSMEEFDISGNKLTGFIPENICKLPKLVNLTYAYNYFNGQGDSCVPGSQKQIALDD 353

[Close]

BLAST of ClCG05G019485 vs. TAIR 10
Match: AT4G33970.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 263.1 bits (671), Expect = 4.0e-70
Identity = 157/368 (42.66%), Postives = 201/368 (54.62%), Query Frame = 0


Query: 69  TFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGI 128
           TF++ RL+RA+IALQAWK AI+SDP NTT +W    V  YT V C+PALDD  + VV G+
Sbjct: 80  TFANTRLKRAYIALQAWKKAIFSDPFNTTGNWHGPHVCGYTGVVCAPALDDSDVTVVAGV 139

Query: 129 DLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFP 188
           DLN ADIAG+LP EL L+TD+A+FH+N+NRFC I+P SF KL L+HE D+SNNRFVG FP
Sbjct: 140 DLNGADIAGHLPAELGLMTDVAMFHLNSNRFCGIIPKSFEKLKLMHEFDVSNNRFVGPFP 199

Query: 189 RVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVI 248
            VV+  P++KY D+++NDFE ++PP+LF KELD IFLN+NRFTS I E+ GES ASV+  
Sbjct: 200 NVVLSWPDVKYFDLRFNDFEGQVPPELFKKELDAIFLNDNRFTSVIPESLGESPASVVTF 259

Query: 249 ADNNFTGCI--------------------------------------------------- 308
           A+N FTGCI                                                   
Sbjct: 260 ANNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIGRLPTS 319

Query: 309 --------IMDISLNLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSPIPEPK----- 361
                    +DIS N LT ++   +C L  LVN T+SYN+F+G+  +  P    K     
Sbjct: 320 FVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLTYSYNYFSGQGGSCVPGGSRKEIALD 379

[Close]

BLAST of ClCG05G019485 vs. TAIR 10
Match: AT1G49490.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 262.3 bits (669), Expect = 6.9e-70
Identity = 136/283 (48.06%), Postives = 171/283 (60.42%), Query Frame = 0


Query: 70  FSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVVGID 129
           F + RL+RA+IALQAWK AIYSDP  TTA+WV +DV SY  V+C+PALDD  L VV G+D
Sbjct: 54  FENDRLKRAYIALQAWKKAIYSDPFKTTANWVGSDVCSYNGVYCAPALDDDSLTVVAGVD 113

Query: 130 LNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGHFPR 189
           LNHADIAG+LP EL L+TD+ALFHIN+NRFC I+P S SKL L++E D+SNNRFVG FP 
Sbjct: 114 LNHADIAGHLPPELGLMTDLALFHINSNRFCGIIPKSLSKLALMYEFDVSNNRFVGQFPE 173

Query: 190 VVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVIVIA 249
           V +  P+LK++D++YN+FE  LP ++F K+LD IFLNNNRF S I    G+S ASV+  A
Sbjct: 174 VSLSWPSLKFLDLRYNEFEGSLPSEIFDKDLDAIFLNNNRFESVIPGTIGKSKASVVTFA 233

Query: 250 DNNFTGCI---------------------------------------------------- 294
           +N F+GCI                                                    
Sbjct: 234 NNKFSGCIPKSIGNMKNLNEIVFTGNNLTGCFPNEIGLLNNVTVFDASKNGFVGSLPSTL 293

[Close]

BLAST of ClCG05G019485 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 258.8 bits (660), Expect = 7.6e-69
Identity = 147/354 (41.53%), Postives = 200/354 (56.50%), Query Frame = 0


Query: 67  SKTFSSPRLRRAFIALQAWKLAIYSDPLNTTADWVCADVRSYTRVFCSPALDDPKLEVVV 126
           S  F +PRLR A+IALQAWK AI SDP N T++W+ ++V +YT VFCSPALD+ K+  V 
Sbjct: 58  SLNFENPRLRNAYIALQAWKQAILSDPNNFTSNWIGSNVCNYTGVFCSPALDNRKIRTVA 117

Query: 127 GIDLNHADIAGYLPVELNLLTDIALFHINNNRFCSIVPSSFSKLTLLHELDISNNRFVGH 186
           GIDLNHADIAGYLP EL LL+D+ALFH+N+NRFC  VP  F++L LL ELD+SNNRF G 
Sbjct: 118 GIDLNHADIAGYLPEELGLLSDLALFHVNSNRFCGTVPHRFNRLKLLFELDLSNNRFAGK 177

Query: 187 FPRVVVRIPNLKYMDIKYNDFEVKLPPKLFTKELDVIFLNNNRFTSYILENFGESTASVI 246
           FP VV+++P+LK++D+++N+FE  +P +LF+K+LD IF+N+NRF   + ENFG+S  SVI
Sbjct: 178 FPTVVLQLPSLKFLDLRFNEFEGTVPKELFSKDLDAIFINHNRFRFELPENFGDSPVSVI 237

Query: 247 VIADNNFTGCI-----------------------------------IMDISL-------- 306
           V+A+N F GC+                                   + D+S         
Sbjct: 238 VLANNRFHGCVPSSLVEMKNLNEIIFMNNGLNSCLPSDIGRLKNVTVFDVSFNELVGPLP 297

Query: 307 ----------------NLLTSVMQDGLCNLAKLVNFTFSYNFFNGKDLNTSPIPEPKAPE 354
                           N+L+  +   +C L KL NFT+SYNFF G+      +PE     
Sbjct: 298 ESVGEMVSVEQLNVAHNMLSGKIPASICQLPKLENFTYSYNFFTGEAPVCLRLPEFDDRR 357

The following BLAST results are available for this feature:

BLAST of ClCG05G019485 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899496.1	5.1e-99	57.85	LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3...	[more]
XP_022139844.1	1.8e-96	51.49	pollen-specific leucine-rich repeat extensin-like protein 3, partial [Momordica ...	[more]
XP_022139800.1	1.3e-89	50.49	pollen-specific leucine-rich repeat extensin-like protein 3 isoform X2 [Momordic...	[more]
XP_022139791.1	1.6e-89	50.73	pollen-specific leucine-rich repeat extensin-like protein 3 isoform X1 [Momordic...	[more]
XP_022981727.1	1.5e-87	51.04	pollen-specific leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]	[more]

BLAST of ClCG05G019485 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ64	8.2e-76	51.21	Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thali...	[more]
Q9XIL9	1.6e-71	40.63	Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thali...	[more]
O81765	5.7e-69	42.66	Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thali...	[more]
Q9XIB6	9.7e-69	48.06	Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thali...	[more]
Q9T0K5	1.1e-67	41.53	Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of ClCG05G019485 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CE38	8.8e-97	51.49	pollen-specific leucine-rich repeat extensin-like protein 3 OS=Momordica charant...	[more]
A0A6J1CDB3	6.1e-90	50.49	pollen-specific leucine-rich repeat extensin-like protein 3 isoform X2 OS=Momord...	[more]
A0A6J1CDS3	7.9e-90	50.73	pollen-specific leucine-rich repeat extensin-like protein 3 isoform X1 OS=Momord...	[more]
A0A6J1IUT2	7.4e-88	51.04	pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima ...	[more]
A0A6J1FS13	1.2e-85	51.63	leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of ClCG05G019485 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19020.1	5.8e-77	51.21	Leucine-rich repeat (LRR) family protein	[more]
AT2G15880.1	1.1e-72	40.63	Leucine-rich repeat (LRR) family protein	[more]
AT4G33970.1	4.0e-70	42.66	Leucine-rich repeat (LRR) family protein	[more]
AT1G49490.1	6.9e-70	48.06	Leucine-rich repeat (LRR) family protein	[more]
AT4G13340.1	7.6e-69	41.53	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 153..207 e-value: 5.8E-7 score: 29.2
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 79..310 e-value: 6.9E-26 score: 93.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..335
None	No IPR available	PANTHER	PTHR32093	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	coord: 65..257 coord: 259..298
None	No IPR available	PANTHER	PTHR32093:SF124	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3	coord: 65..257 coord: 259..298
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 88..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G019485.1	ClCG05G019485.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding