Homology
BLAST of ClCG05G019460 vs. NCBI nr
Match:
KAA0057172.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK27155.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1720.3 bits (4454), Expect = 0.0e+00
Identity = 860/987 (87.13%), Postives = 899/987 (91.08%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
MYEL A+ASKISNI QLR HGHLV NSLHSHNYWVSLLL+IC RLHAHPAY SIF S
Sbjct: 1 MYELVALASKISNIRQLRLFHGHLVHNSLHSHNYWVSLLLVICNRLHAHPAYVDSIFTSS 60
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
PSPDAS+YSCMLKYYSRMGA+N+VVSLF+CM SLDLRPQPFVYIYLIK AGK GNLFHAY
Sbjct: 61 PSPDASVYSCMLKYYSRMGAHNQVVSLFKCMHSLDLRPQPFVYIYLIKSAGKSGNLFHAY 120
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG +DD FIRNAILDMY K GQVDLARKLFEQMAE+TL DWNSMISGCWKSGNET+A
Sbjct: 121 VLKLGHIDDRFIRNAILDMYVKNGQVDLARKLFEQMAEKTLVDWNSMISGCWKSGNETEA 180
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VMLFNMMPARNIITWT+MVTGYAK+GDLESARRYFDEMPERSVVSWNAM SAYAQ EC +
Sbjct: 181 VMLFNMMPARNIITWTSMVTGYAKVGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EALKLFHQMLKEGITPDDTTW TISSCSSIG+ TLADSILR INQKH +LN+FV+TALL
Sbjct: 241 EALKLFHQMLKEGITPDDTTWAVTISSCSSIGDPTLADSILRMINQKHIVLNSFVQTALL 300
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELG QRN V WN+MISAYTRVGKLSLARELFDNMPKRDVVSWN
Sbjct: 301 DMHAKFGNLEIARNIFDELGSQRNDVAWNVMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMIAGYAQNGEAA SIELF+EMISC DIQPDEVT+ASVLSACGHIGALKL YWVLDIV+E
Sbjct: 361 SMIAGYAQNGEAAMSIELFKEMISCADIQPDEVTIASVLSACGHIGALKLGYWVLDIVRE 420
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIKLGISGFNSLIF+YSKCG VADAHRIFQTMET+DVVSFNTLISGFAANGHGKEA+KL
Sbjct: 421 KNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMETRDVVSFNTLISGFAANGHGKEAIKL 480
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
LTMEEEGIEPDHVTY GVLTACSHAGLL EGK+VFKSIK+PTVDHYACMVDLLGRAGEL
Sbjct: 481 VLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIKAPTVDHYACMVDLLGRAGEL 540
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
DEAK+LIQSMPM+PH GVYGSLLNASRIHKRV LGELAA+KLFELEPQNPGNYVLLSNIY
Sbjct: 541 DEAKMLIQSMPMKPHGGVYGSLLNASRIHKRVGLGELAASKLFELEPQNPGNYVLLSNIY 600
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
AS+GRWEDVK+VRE MR GL+K VGMSWVEYKGQVHKF+VGDRSHE+SKDIY+LLAELE
Sbjct: 601 ASSGRWEDVKRVREMMRKRGLQKLVGMSWVEYKGQVHKFIVGDRSHEQSKDIYKLLAELE 660
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL+SEVGTPIRVVKNLRICL
Sbjct: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTPIRVVKNLRICL 720
Query: 721 DCHTAIKIISKLEEREIIVRDNNRSEYDTLGTSVKAALVYLGTALVKLVCLATFLNVSEN 780
DCHTAIK+ISKLE REI+VRDNNRSEYDTLGTSVKAALVYLGTALVKLVCLATFLNVSEN
Sbjct: 721 DCHTAIKMISKLEGREIVVRDNNRSEYDTLGTSVKAALVYLGTALVKLVCLATFLNVSEN 780
Query: 781 DSFDLYQCRMDYLESGCKALFGELALALVFFLFSCLPSNGHIAELNGMELLKALIGLIDV 840
DSFD YQ ELLKALIG IDV
Sbjct: 781 DSFDPYQ-----------------------------------------ELLKALIGFIDV 840
Query: 841 AGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYILQGLE 900
AGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYILQGLE
Sbjct: 841 AGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYILQGLE 900
Query: 901 ANANLVLSISLAALGSLLWLRKNKPKTLIPIIYICALIVATMPSITSYLRRGMGWHFPKV 960
ANANLVLSISLAALGSL+WLRKNKPKTLIPIIY+CALIVATMPSITSYLRRGMGWHFPKV
Sbjct: 901 ANANLVLSISLAALGSLMWLRKNKPKTLIPIIYVCALIVATMPSITSYLRRGMGWHFPKV 946
Query: 961 VGFELFTSLVMAFISWQLFSACQRPSV 988
VGFELFTSLVMAFISWQLFSACQRPSV
Sbjct: 961 VGFELFTSLVMAFISWQLFSACQRPSV 946
BLAST of ClCG05G019460 vs. NCBI nr
Match:
KAG6608509.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1659.8 bits (4297), Expect = 0.0e+00
Identity = 839/991 (84.66%), Postives = 879/991 (88.70%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
MY+L AIA+KISNISQLRQLH HLVLNSL S NYWVSLLL ICTRLHAHP+YAASIF S
Sbjct: 1 MYDLVAIATKISNISQLRQLHAHLVLNSLQSQNYWVSLLLTICTRLHAHPSYAASIFTSS 60
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
P P+AS+YSCMLKYYSRMGA++EVVSLFRCMQ LDLRP P VYIYLIKLAGK GNLFHA
Sbjct: 61 PYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHAS 120
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG +DDHFIRNA+LDMYAKYGQVDLARKLFEQM RTLADWNSMISGCW SGNE DA
Sbjct: 121 VLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADA 180
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VMLFNMMP RN I+WTAMVTGYAK DLESARRYFDEMPE+SVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFNMMPDRNTISWTAMVTGYAKRRDLESARRYFDEMPEKSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EALKLFH+MLKEGITPDDTTWVA ISSCSSIGN LADS+L KINQKH ILNN+VKTALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQKHVILNNYVKTALL 300
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELGGQRNAVTWN+MISAYTR GKLSLARELFDNMPKRDVVSWN
Sbjct: 301 DMHAKFGNLEIARRIFDELGGQRNAVTWNVMISAYTRAGKLSLARELFDNMPKRDVVSWN 360
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMIAGYAQNGE+A SI LF+EMI CTDIQPDEVT+ASVLSACGHIGALK SYWVL+IVQE
Sbjct: 361 SMIAGYAQNGESAMSIHLFREMIDCTDIQPDEVTIASVLSACGHIGALKFSYWVLNIVQE 420
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIK GISGFNSLIF+YSKCG V DAHRIFQ M TKDVV+FNTLISGFAANGHGK+A+KL
Sbjct: 421 KNIKFGISGFNSLIFMYSKCGNVVDAHRIFQNMGTKDVVTFNTLISGFAANGHGKDAIKL 480
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
LTMEEEGIEPDHVTY GVLTACSHAG+LKEGK++FKSIK+PTVDHYACMVDLLGRAGEL
Sbjct: 481 LLTMEEEGIEPDHVTYIGVLTACSHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAGEL 540
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
DEAKILI+SMPM+PHAGVYGSLLN SRIHKRVELGELAANKL ELEPQNPGNY+LLSNIY
Sbjct: 541 DEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYILLSNIY 600
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
ASAGRWEDV++VREKMR GG+KKSVGMSWVEYKGQ+H F VGDRSHE SKDIYRLLAELE
Sbjct: 601 ASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAELE 660
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMKRVGFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRI L
Sbjct: 661 RKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRI-L 720
Query: 721 DCHTAIKIISKLEER----EIIVRDNNRSEYDTLGTSVKAALVYLGTALVKLVCLATFLN 780
+ I KL + +I + SEYDTLGTSVKAALVYLGTALVKLVCLATFLN
Sbjct: 721 KGYVLAMITGKLAKSKFMDKIHLHKERLSEYDTLGTSVKAALVYLGTALVKLVCLATFLN 780
Query: 781 VSENDSFDLYQCRMDYLESGCKALFGELALALVFFLFSCLPSNGHIAELNGMELLKALIG 840
VSENDSFDLYQ ELLKALIG
Sbjct: 781 VSENDSFDLYQ-----------------------------------------ELLKALIG 840
Query: 841 LIDVAGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYIL 900
LIDVAGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLW+GARGLEFTWDYIL
Sbjct: 841 LIDVAGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWIGARGLEFTWDYIL 900
Query: 901 QGLEANANLVLSISLAALGSLLWLRKNKPKTLIPIIYICALIVATMPSITSYLRRGMGWH 960
QGLEANANLVLSISLAALGSL+WLRKNKPK LIPIIYICALIVATMPSITSYLRRGMGWH
Sbjct: 901 QGLEANANLVLSISLAALGSLMWLRKNKPKALIPIIYICALIVATMPSITSYLRRGMGWH 949
Query: 961 FPKVVGFELFTSLVMAFISWQLFSACQRPSV 988
FPKVVGFELFTSL MAFISWQLFSACQRPSV
Sbjct: 961 FPKVVGFELFTSLAMAFISWQLFSACQRPSV 949
BLAST of ClCG05G019460 vs. NCBI nr
Match:
XP_038898615.1 (pentatricopeptide repeat-containing protein At1g14470 [Benincasa hispida])
HSP 1 Score: 1383.2 bits (3579), Expect = 0.0e+00
Identity = 682/744 (91.67%), Postives = 713/744 (95.83%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
M EL AIASKISNI QLRQLHGHLVLNSLHSHNYWVSLLLI CTRLHAHPAY ASIF S
Sbjct: 1 MSELGAIASKISNIRQLRQLHGHLVLNSLHSHNYWVSLLLINCTRLHAHPAYVASIFTSS 60
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
PSP+ S+YSCMLKYYSRMGA+NEVVSLFRCMQSLDLRPQPFVYIYLIKLAGK GNLFHAY
Sbjct: 61 PSPNGSVYSCMLKYYSRMGAHNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKSGNLFHAY 120
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG VDD FIRNAILDMYAKYGQVDLARKLF QMAERTLADWNSMISGCWKSGNETDA
Sbjct: 121 VLKLGHVDDQFIRNAILDMYAKYGQVDLARKLFAQMAERTLADWNSMISGCWKSGNETDA 180
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VMLFN MP RNIITWTAMVTGYAKMGDLE+ARRYFDEMPERSVVSWNA+LSAYAQN CAE
Sbjct: 181 VMLFNEMPDRNIITWTAMVTGYAKMGDLETARRYFDEMPERSVVSWNAILSAYAQNGCAE 240
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EALKLFH+MLKEGITPDDTTWVATISSCSSI N TLADSILRKINQ+H+ILN+FVKTALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVATISSCSSISNPTLADSILRKINQQHNILNSFVKTALL 300
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELGGQRN VTWN+MISAY RVGKLSLA+ELFDNMPKRDVVSWN
Sbjct: 301 DMHAKFGNLEIARNIFDELGGQRNVVTWNVMISAYMRVGKLSLAQELFDNMPKRDVVSWN 360
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMI GYAQNGE+AKSIELF+EMISC DIQPDEVT+ASVLSACGHIGALKLSYWVLDIV+E
Sbjct: 361 SMIVGYAQNGESAKSIELFKEMISCNDIQPDEVTIASVLSACGHIGALKLSYWVLDIVRE 420
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIKLG+SGFNSLIF+YSKCG VADAHRIFQTMET+DVVSFNTLISGFAANGHGKEA+KL
Sbjct: 421 KNIKLGLSGFNSLIFMYSKCGSVADAHRIFQTMETRDVVSFNTLISGFAANGHGKEAIKL 480
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
LTMEEEGIEPDHVTY GVLTACSHAGLLKEGK+VFKSIK+PTVDHYACMVDLLGRAGEL
Sbjct: 481 VLTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNVFKSIKAPTVDHYACMVDLLGRAGEL 540
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
DEAK+L+Q MPMEPHAGV+GSLLNASRIHKRVELGELAA+KLFELEPQNPGNYVLLSNIY
Sbjct: 541 DEAKLLMQLMPMEPHAGVFGSLLNASRIHKRVELGELAASKLFELEPQNPGNYVLLSNIY 600
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
ASAGRWEDVKK+REKMR GG+KKSVGMSWVEYKGQVHKF+VGDRSHERSKDIYRLLAELE
Sbjct: 601 ASAGRWEDVKKIREKMREGGVKKSVGMSWVEYKGQVHKFIVGDRSHERSKDIYRLLAELE 660
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMK GFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALL+SEVGTPIRVVKNLRICL
Sbjct: 661 RKMKTFGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTPIRVVKNLRICL 720
Query: 721 DCHTAIKIISKLEEREIIVRDNNR 745
DCHTAIK+ISKLEEREI+VRDNNR
Sbjct: 721 DCHTAIKMISKLEEREIVVRDNNR 744
BLAST of ClCG05G019460 vs. NCBI nr
Match:
XP_004147828.2 (pentatricopeptide repeat-containing protein At1g14470, partial [Cucumis sativus])
HSP 1 Score: 1348.6 bits (3489), Expect = 0.0e+00
Identity = 667/744 (89.65%), Postives = 703/744 (94.49%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
MYEL A+ASKISNI QLRQ HGHLV NSLHSHNYWVSLLLI CTRLHAHPAY SIF S
Sbjct: 9 MYELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSS 68
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
PSPDAS+YSCMLKYYSRMGA+N+VVSLF+C SL+LRPQPFVYIYLIKLAGK GNLFHAY
Sbjct: 69 PSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLFHAY 128
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG +DDHFIRNAILDMYAK GQVDLAR LFEQMAERTLADWNSMISGCWKSGNET+A
Sbjct: 129 VLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEA 188
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
V+LFNMMPARNIITWT+MVTGYAKMGDLESARRYFDEMPERSVVSWNAM SAYAQ EC +
Sbjct: 189 VVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 248
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EAL LFHQML+EGITPDDTTWV TISSCSSIG+ TLADSILR I+QKH +LN+FVKTALL
Sbjct: 249 EALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALL 308
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELG QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN
Sbjct: 309 DMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 368
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMIAGYAQNGE+A SIELF+EMISC DIQPDEVT+ASVLSACGHIGALKLSYWVLDIV+E
Sbjct: 369 SMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVRE 428
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIKLGISGFNSLIF+YSKCG VADAHRIFQTM T+DVVSFNTLISGFAANGHGKEA+KL
Sbjct: 429 KNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKL 488
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
LTMEEEGIEPDHVTY GVLTACSHAGLL EGK+VFKSI++PTVDHYACMVDLLGRAGEL
Sbjct: 489 VLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYACMVDLLGRAGEL 548
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
DEAK+LIQSMPM+PHAGVYGSLLNASRIHKRV LGELAA+KLFELEPQN GNYVLLSNIY
Sbjct: 549 DEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIY 608
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
AS GRWEDVK+VRE M+ GGLKKSVGMSWVEYKGQVHKF VGDRSHE+SKDIY+LLAELE
Sbjct: 609 ASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELE 668
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL+SEVGT IRVVKNLRICL
Sbjct: 669 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICL 728
Query: 721 DCHTAIKIISKLEEREIIVRDNNR 745
DCHTAIK+ISKLE REI+VRDNNR
Sbjct: 729 DCHTAIKMISKLEGREIVVRDNNR 752
BLAST of ClCG05G019460 vs. NCBI nr
Match:
XP_008454670.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g14470 [Cucumis melo])
HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 662/744 (88.98%), Postives = 699/744 (93.95%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
MYEL A+ASKISNI QLR HGHLV NSLHSHNYWVSLLL+IC RLHAHPAY SIF S
Sbjct: 1 MYELVALASKISNIRQLRLFHGHLVHNSLHSHNYWVSLLLVICNRLHAHPAYVDSIFTSS 60
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
PSPDAS+YSCMLKYYSRMGA+N+VVSLF+CM SLDLRPQPFVYIYLIK AGK GNLFHAY
Sbjct: 61 PSPDASVYSCMLKYYSRMGAHNQVVSLFKCMHSLDLRPQPFVYIYLIKSAGKSGNLFHAY 120
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG +DD FIRNAILDMY K GQVDLARKLFEQMAE+TL DWNSMISGCWKSGNET+A
Sbjct: 121 VLKLGHIDDRFIRNAILDMYVKNGQVDLARKLFEQMAEKTLVDWNSMISGCWKSGNETEA 180
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VMLFNMMPARNIITWT+MVTGYAK+GDLESARRYFDEMPERSVVSWNAM SAYAQ EC +
Sbjct: 181 VMLFNMMPARNIITWTSMVTGYAKVGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EALKLFHQMLKEGITPDDTTW TISSCSSIG+ TLADSILR INQKH +LN+FV+TALL
Sbjct: 241 EALKLFHQMLKEGITPDDTTWAVTISSCSSIGDPTLADSILRMINQKHIVLNSFVQTALL 300
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELG QRN V WN+MISAYTRVGKLSLARELFDNMPKRDVVSWN
Sbjct: 301 DMHAKFGNLEIARNIFDELGSQRNDVAWNVMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMIAGYAQNGEAA SIELF+EMISC DIQPDEVT+ASVLSACGHIGALKL YWVLDIV+E
Sbjct: 361 SMIAGYAQNGEAAMSIELFKEMISCADIQPDEVTIASVLSACGHIGALKLGYWVLDIVRE 420
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIKLGISGFNSLIF+YSKCG VADAHRIFQTMET+DVVSFNTLISGFAANGHGKEA+KL
Sbjct: 421 KNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMETRDVVSFNTLISGFAANGHGKEAIKL 480
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
LTMEEEGIEPDHVTY GVLTACSHAGLL EGK+VFKSIK+PTVDHYACMVDLLGRAGEL
Sbjct: 481 VLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIKAPTVDHYACMVDLLGRAGEL 540
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
DEAK+LIQSMPM+PH GVYGSLLNASRIHKRV LGELAA+KLFELEPQNPGNYVLLSNIY
Sbjct: 541 DEAKMLIQSMPMKPHGGVYGSLLNASRIHKRVGLGELAASKLFELEPQNPGNYVLLSNIY 600
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
AS+GRWEDVK+VRE MR GL+K VGMSWVEYKGQVHKF+VGDRSHE+SKDIY+LLAELE
Sbjct: 601 ASSGRWEDVKRVREMMRKRGLQKLVGMSWVEYKGQVHKFIVGDRSHEQSKDIYKLLAELE 660
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL+SEVGTPIRVVKNLRICL
Sbjct: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTPIRVVKNLRICL 720
Query: 721 DCHTAIKIISKLEEREIIVRDNNR 745
DCHTAIK+ISKLE REI+VRDNNR
Sbjct: 721 DCHTAIKMISKLEGREIVVRDNNR 744
BLAST of ClCG05G019460 vs. ExPASy Swiss-Prot
Match:
Q9M9R6 (Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana OX=3702 GN=PCMP-A4 PE=2 SV=2)
HSP 1 Score: 573.5 bits (1477), Expect = 4.5e-162
Identity = 284/532 (53.38%), Postives = 384/532 (72.18%), Query Frame = 0
Query: 4 LRAIASKISNISQLRQLHGHL-VLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSLPS 63
L AIAS+ QL Q+H L V NSL +YW S ++ CTRL A Y IF+S+
Sbjct: 9 LAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTF 68
Query: 64 PDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAYVL 123
P+ + + M KY+S+M N+V+ L+ + P F + +IK AG++G LF A V
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVE 128
Query: 124 KLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDAVM 183
KLGF D ++RN I+DMY K+ V+ ARK+F+Q+++R +DWN MISG WK GN+ +A
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 184 LFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAEEA 243
LF+MMP ++++WT M+TG+AK+ DLE+AR+YFD MPE+SVVSWNAMLS YAQN E+A
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 244 LKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDM 303
L+LF+ ML+ G+ P++TTWV IS+CS + +L S+++ I++K LN FVKTALLDM
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 304 HAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 363
HAK +++ AR IF+ELG QRN VTWN MIS YTR+G +S AR+LFD MPKR+VVSWNS+
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 364 IAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQEKN 423
IAGYA NG+AA +IE F++MI D +PDEVT+ SVLSACGH+ L+L ++D +++
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ 428
Query: 424 IKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLAL 483
IKL SG+ SLIF+Y++ G + +A R+F M+ +DVVS+NTL + FAANG G E + L
Sbjct: 429 IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLS 488
Query: 484 TMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLL 535
M++EGIEPD VTYT VLTAC+ AGLLKEG+ +FKSI++P DHYACM DLL
Sbjct: 489 KMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYACM-DLL 539
BLAST of ClCG05G019460 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 498.4 bits (1282), Expect = 1.8e-139
Identity = 266/674 (39.47%), Postives = 394/674 (58.46%), Query Frame = 0
Query: 134 NAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDAVMLFNMMPARNII 193
N ++ Y + G+ +LARKLF++M ER L WN MI G ++ N A LF +MP R++
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 194 TWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLF------- 253
+W M++GYA+ G ++ AR FD MPE++ VSWNA+LSAY QN EEA LF
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 254 ---------------------------------------------------HQMLKEGIT 313
Q+ E
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 314 PDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDMHAKFGNLEFARTI 373
D TW A +S A + K+ +++ + N A+L + + +E A+ +
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN----AMLAGYVQGERMEMAKEL 338
Query: 374 FDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGEAAKS 433
FD + RN TWN MI+ Y + GK+S A+ LFD MPKRD VSW +MIAGY+Q+G + ++
Sbjct: 339 FDVM-PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 398
Query: 434 IELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQEKNIKLGISGFNSLIF 493
+ LF +M + + + +S LS C + AL+L + + + + G N+L+
Sbjct: 399 LRLFVQM-EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 458
Query: 494 LYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLALTMEEEGIEPDHVT 553
+Y KCG + +A+ +F+ M KD+VS+NT+I+G++ +G G+ A++ +M+ EG++PD T
Sbjct: 459 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 518
Query: 554 YTGVLTACSHAGLLKEGKDVFKSIKS-----PTVDHYACMVDLLGRAGELDEAKILIQSM 613
VL+ACSH GL+ +G+ F ++ P HYACMVDLLGRAG L++A L+++M
Sbjct: 519 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 578
Query: 614 PMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIYASAGRWEDVK 673
P EP A ++G+LL ASR+H EL E AA+K+F +EP+N G YVLLSN+YAS+GRW DV
Sbjct: 579 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 638
Query: 674 KVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELERKMKRVGFVA 733
K+R +MR+ G+KK G SW+E + + H F VGD H +I+ L EL+ +MK+ G+V+
Sbjct: 639 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 698
Query: 734 DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICLDCHTAIKIIS 745
S L DVEEEEKE M+ HSE+LA+ + ++ G PIRV+KNLR+C DCH AIK ++
Sbjct: 699 KTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMA 758
BLAST of ClCG05G019460 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-137
Identity = 270/746 (36.19%), Postives = 429/746 (57.51%), Query Frame = 0
Query: 14 ISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAH---PAYAASIFNSLPSPDASIYSC 73
+ LR +H ++ LH+ NY +S L+ C L H YA S+F ++ P+ I++
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCI-LSPHFEGLPYAISVFKTIQEPNLLIWNT 105
Query: 74 MLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIK-----LAGKYGNLFHAYVLKLG 133
M + ++ + L+ CM SL L P + + +++K A K G H +VLKLG
Sbjct: 106 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 165
Query: 134 FVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDAVMLFN 193
D ++ +++ MY + G+++ A K+F++
Sbjct: 166 CDLDLYVHTSLISMYVQNGRLEDAHKVFDK------------------------------ 225
Query: 194 MMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKL 253
P R+++++TA++ GYA G +E+A++ FDE+P + VVSWNAM+S YA+ +EAL+L
Sbjct: 226 -SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 285
Query: 254 FHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDMHAK 313
F M+K + PD++T V +S+C+ G+ L Q H +D H
Sbjct: 286 FKDMMKTNVRPDESTMVTVVSACAQSGSIELG-------RQVH---------LWIDDHGF 345
Query: 314 FGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAG 373
NL+ N +I Y++ G+L A LF+ +P +DV+SWN++I G
Sbjct: 346 GSNLKIV----------------NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 405
Query: 374 YAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE--KNI 433
Y +++ LFQEM+ + P++VT+ S+L AC H+GA+ + W+ + + K +
Sbjct: 406 YTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 465
Query: 434 KLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLALT 493
S SLI +Y+KCG + AH++F ++ K + S+N +I GFA +G + L
Sbjct: 466 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 525
Query: 494 MEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSI-----KSPTVDHYACMVDLLGRAG 553
M + GI+PD +T+ G+L+ACSH+G+L G+ +F+++ +P ++HY CM+DLLG +G
Sbjct: 526 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 585
Query: 554 ELDEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSN 613
EA+ +I M MEP ++ SLL A ++H VELGE A L ++EP+NPG+YVLLSN
Sbjct: 586 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 645
Query: 614 IYASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAE 673
IYASAGRW +V K R + + G+KK G S +E VH+F++GD+ H R+++IY +L E
Sbjct: 646 IYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 705
Query: 674 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRI 733
+E +++ GFV D S L+++EEE KE L HSEKLAI F L+ ++ GT + +VKNLR+
Sbjct: 706 MEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 726
Query: 734 CLDCHTAIKIISKLEEREIIVRDNNR 745
C +CH A K+ISK+ +REII RD R
Sbjct: 766 CRNCHEATKLISKIYKREIIARDRTR 726
BLAST of ClCG05G019460 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 487.6 bits (1254), Expect = 3.2e-136
Identity = 282/799 (35.29%), Postives = 437/799 (54.69%), Query Frame = 0
Query: 5 RAIASKISN---ISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHP--AYAASIF-N 64
+A S + N I +L+ H L L + ++ L+ L ++A +F N
Sbjct: 33 KATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 65 SLPSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGK-----Y 124
S +Y+ +++ Y+ G NE + LF M + + P + + + + K
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 125 GNLFHAYVLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWK 184
G H ++K+G+ D F++N+++ YA+ G++D ARK+F++M+ER + W SMI G +
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 185 SGNETDAVMLFNMM-----PARNIITWTAMVTGYAKMGDLES------------------ 244
DAV LF M N +T +++ AK+ DLE+
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 245 -----------------ARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLFHQMLKEG 304
A+R FDE ++ NAM S Y + EAL +F+ M+ G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 305 ITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDMHAKFGNLEFAR 364
+ PD + ++ ISSCS + N S + + + + AL+DM+ K + A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 365 TIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGEAA 424
IFD + + VTWN +++ Y G++ A E F+ MP++++VSWN++I+G Q
Sbjct: 393 RIFDRM-SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 452
Query: 425 KSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQEKNIKLGISGFNSL 484
++IE+F M S + D VT+ S+ SACGH+GAL L+ W+ +++ I+L + +L
Sbjct: 453 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 512
Query: 485 IFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLALTMEEEGIEPDH 544
+ ++S+CG A IF ++ +DV ++ I A G+ + A++L M E+G++PD
Sbjct: 513 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 572
Query: 545 VTYTGVLTACSHAGLLKEGKDVFKSI-----KSPTVDHYACMVDLLGRAGELDEAKILIQ 604
V + G LTACSH GL+++GK++F S+ SP HY CMVDLLGRAG L+EA LI+
Sbjct: 573 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 632
Query: 605 SMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIYASAGRWED 664
MPMEP+ ++ SLL A R+ VE+ AA K+ L P+ G+YVLLSN+YASAGRW D
Sbjct: 633 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 692
Query: 665 VKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELERKMKRVGF 724
+ KVR M+ GL+K G S ++ +G+ H+F GD SH +I +L E+ ++ +G
Sbjct: 693 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 752
Query: 725 VADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICLDCHTAIKI 748
V D S L DV+E+EK ML HSEKLA+ + L+ S GT IR+VKNLR+C DCH+ K
Sbjct: 753 VPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKF 812
BLAST of ClCG05G019460 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 458.0 bits (1177), Expect = 2.7e-127
Identity = 274/787 (34.82%), Postives = 417/787 (52.99%), Query Frame = 0
Query: 7 IASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSLPSPDAS 66
+ + S++ +LRQ+ + N L+ +++ + L+ + R + AA +F + S
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCR-YGSVDEAARVFEPIDSKLNV 102
Query: 67 IYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAG-----KYGNLFHAYV 126
+Y MLK ++++ ++ + F M+ D+ P + + YL+K+ G + G H +
Sbjct: 103 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 162
Query: 127 LKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDAV 186
+K GF D F + +MYAK QV+ ARK+F++M ER L WN++++G ++G A+
Sbjct: 163 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 222
Query: 187 MLFNMMPARNI----IT-----------------------------------WTAMVTGY 246
+ M N+ IT TA+V Y
Sbjct: 223 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 282
Query: 247 AKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLFHQMLKEGITPDDTTWV 306
AK G LE+AR+ FD M ER+VVSWN+M+ AY QNE +EA+ +F +ML EG+ P D + +
Sbjct: 283 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 342
Query: 307 ATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDMHAKFGNLEFARTIFDELGGQ 366
+ +C+ +G+ F + ELG
Sbjct: 343 GALHACADLGDLERG--------------------------------RFIHKLSVELGLD 402
Query: 367 RNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGEAAKSIELFQEM 426
RN N +IS Y + ++ A +F + R +VSWN+MI G+AQNG ++ F +M
Sbjct: 403 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 462
Query: 427 ISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQEKNIKLGISGFNSLIFLYSKCGC 486
S T ++PD T SV++A + + W+ +V + + +L+ +Y+KCG
Sbjct: 463 RSRT-VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 522
Query: 487 VADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLALTMEEEGIEPDHVTYTGVLTA 546
+ A IF M + V ++N +I G+ +G GK A++L M++ I+P+ VT+ V++A
Sbjct: 523 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 582
Query: 547 CSHAGLLKEGKDVFKSIKSP-----TVDHYACMVDLLGRAGELDEAKILIQSMPMEPHAG 606
CSH+GL++ G F +K ++DHY MVDLLGRAG L+EA I MP++P
Sbjct: 583 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 642
Query: 607 VYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIYASAGRWEDVKKVREKMR 666
VYG++L A +IHK V E AA +LFEL P + G +VLL+NIY +A WE V +VR M
Sbjct: 643 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 702
Query: 667 NGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELERKMKRVGFVADKSCALR 726
GL+K+ G S VE K +VH F G +H SK IY L +L +K G+V D + L
Sbjct: 703 RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL- 762
Query: 727 DVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICLDCHTAIKIISKLEEREI 745
VE + KE++L THSEKLAI F LL + GT I V KNLR+C DCH A K IS + REI
Sbjct: 763 GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREI 794
BLAST of ClCG05G019460 vs. ExPASy TrEMBL
Match:
A0A5D3DV14 (Transmembrane protein 147 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1920G00350 PE=3 SV=1)
HSP 1 Score: 1720.3 bits (4454), Expect = 0.0e+00
Identity = 860/987 (87.13%), Postives = 899/987 (91.08%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
MYEL A+ASKISNI QLR HGHLV NSLHSHNYWVSLLL+IC RLHAHPAY SIF S
Sbjct: 1 MYELVALASKISNIRQLRLFHGHLVHNSLHSHNYWVSLLLVICNRLHAHPAYVDSIFTSS 60
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
PSPDAS+YSCMLKYYSRMGA+N+VVSLF+CM SLDLRPQPFVYIYLIK AGK GNLFHAY
Sbjct: 61 PSPDASVYSCMLKYYSRMGAHNQVVSLFKCMHSLDLRPQPFVYIYLIKSAGKSGNLFHAY 120
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG +DD FIRNAILDMY K GQVDLARKLFEQMAE+TL DWNSMISGCWKSGNET+A
Sbjct: 121 VLKLGHIDDRFIRNAILDMYVKNGQVDLARKLFEQMAEKTLVDWNSMISGCWKSGNETEA 180
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VMLFNMMPARNIITWT+MVTGYAK+GDLESARRYFDEMPERSVVSWNAM SAYAQ EC +
Sbjct: 181 VMLFNMMPARNIITWTSMVTGYAKVGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EALKLFHQMLKEGITPDDTTW TISSCSSIG+ TLADSILR INQKH +LN+FV+TALL
Sbjct: 241 EALKLFHQMLKEGITPDDTTWAVTISSCSSIGDPTLADSILRMINQKHIVLNSFVQTALL 300
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELG QRN V WN+MISAYTRVGKLSLARELFDNMPKRDVVSWN
Sbjct: 301 DMHAKFGNLEIARNIFDELGSQRNDVAWNVMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMIAGYAQNGEAA SIELF+EMISC DIQPDEVT+ASVLSACGHIGALKL YWVLDIV+E
Sbjct: 361 SMIAGYAQNGEAAMSIELFKEMISCADIQPDEVTIASVLSACGHIGALKLGYWVLDIVRE 420
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIKLGISGFNSLIF+YSKCG VADAHRIFQTMET+DVVSFNTLISGFAANGHGKEA+KL
Sbjct: 421 KNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMETRDVVSFNTLISGFAANGHGKEAIKL 480
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
LTMEEEGIEPDHVTY GVLTACSHAGLL EGK+VFKSIK+PTVDHYACMVDLLGRAGEL
Sbjct: 481 VLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIKAPTVDHYACMVDLLGRAGEL 540
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
DEAK+LIQSMPM+PH GVYGSLLNASRIHKRV LGELAA+KLFELEPQNPGNYVLLSNIY
Sbjct: 541 DEAKMLIQSMPMKPHGGVYGSLLNASRIHKRVGLGELAASKLFELEPQNPGNYVLLSNIY 600
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
AS+GRWEDVK+VRE MR GL+K VGMSWVEYKGQVHKF+VGDRSHE+SKDIY+LLAELE
Sbjct: 601 ASSGRWEDVKRVREMMRKRGLQKLVGMSWVEYKGQVHKFIVGDRSHEQSKDIYKLLAELE 660
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL+SEVGTPIRVVKNLRICL
Sbjct: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTPIRVVKNLRICL 720
Query: 721 DCHTAIKIISKLEEREIIVRDNNRSEYDTLGTSVKAALVYLGTALVKLVCLATFLNVSEN 780
DCHTAIK+ISKLE REI+VRDNNRSEYDTLGTSVKAALVYLGTALVKLVCLATFLNVSEN
Sbjct: 721 DCHTAIKMISKLEGREIVVRDNNRSEYDTLGTSVKAALVYLGTALVKLVCLATFLNVSEN 780
Query: 781 DSFDLYQCRMDYLESGCKALFGELALALVFFLFSCLPSNGHIAELNGMELLKALIGLIDV 840
DSFD YQ ELLKALIG IDV
Sbjct: 781 DSFDPYQ-----------------------------------------ELLKALIGFIDV 840
Query: 841 AGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYILQGLE 900
AGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYILQGLE
Sbjct: 841 AGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYILQGLE 900
Query: 901 ANANLVLSISLAALGSLLWLRKNKPKTLIPIIYICALIVATMPSITSYLRRGMGWHFPKV 960
ANANLVLSISLAALGSL+WLRKNKPKTLIPIIY+CALIVATMPSITSYLRRGMGWHFPKV
Sbjct: 901 ANANLVLSISLAALGSLMWLRKNKPKTLIPIIYVCALIVATMPSITSYLRRGMGWHFPKV 946
Query: 961 VGFELFTSLVMAFISWQLFSACQRPSV 988
VGFELFTSLVMAFISWQLFSACQRPSV
Sbjct: 961 VGFELFTSLVMAFISWQLFSACQRPSV 946
BLAST of ClCG05G019460 vs. ExPASy TrEMBL
Match:
A0A1S3BZ59 (pentatricopeptide repeat-containing protein At1g14470 OS=Cucumis melo OX=3656 GN=LOC103495023 PE=3 SV=1)
HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 662/744 (88.98%), Postives = 699/744 (93.95%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
MYEL A+ASKISNI QLR HGHLV NSLHSHNYWVSLLL+IC RLHAHPAY SIF S
Sbjct: 1 MYELVALASKISNIRQLRLFHGHLVHNSLHSHNYWVSLLLVICNRLHAHPAYVDSIFTSS 60
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
PSPDAS+YSCMLKYYSRMGA+N+VVSLF+CM SLDLRPQPFVYIYLIK AGK GNLFHAY
Sbjct: 61 PSPDASVYSCMLKYYSRMGAHNQVVSLFKCMHSLDLRPQPFVYIYLIKSAGKSGNLFHAY 120
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG +DD FIRNAILDMY K GQVDLARKLFEQMAE+TL DWNSMISGCWKSGNET+A
Sbjct: 121 VLKLGHIDDRFIRNAILDMYVKNGQVDLARKLFEQMAEKTLVDWNSMISGCWKSGNETEA 180
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VMLFNMMPARNIITWT+MVTGYAK+GDLESARRYFDEMPERSVVSWNAM SAYAQ EC +
Sbjct: 181 VMLFNMMPARNIITWTSMVTGYAKVGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EALKLFHQMLKEGITPDDTTW TISSCSSIG+ TLADSILR INQKH +LN+FV+TALL
Sbjct: 241 EALKLFHQMLKEGITPDDTTWAVTISSCSSIGDPTLADSILRMINQKHIVLNSFVQTALL 300
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELG QRN V WN+MISAYTRVGKLSLARELFDNMPKRDVVSWN
Sbjct: 301 DMHAKFGNLEIARNIFDELGSQRNDVAWNVMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMIAGYAQNGEAA SIELF+EMISC DIQPDEVT+ASVLSACGHIGALKL YWVLDIV+E
Sbjct: 361 SMIAGYAQNGEAAMSIELFKEMISCADIQPDEVTIASVLSACGHIGALKLGYWVLDIVRE 420
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIKLGISGFNSLIF+YSKCG VADAHRIFQTMET+DVVSFNTLISGFAANGHGKEA+KL
Sbjct: 421 KNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMETRDVVSFNTLISGFAANGHGKEAIKL 480
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
LTMEEEGIEPDHVTY GVLTACSHAGLL EGK+VFKSIK+PTVDHYACMVDLLGRAGEL
Sbjct: 481 VLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIKAPTVDHYACMVDLLGRAGEL 540
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
DEAK+LIQSMPM+PH GVYGSLLNASRIHKRV LGELAA+KLFELEPQNPGNYVLLSNIY
Sbjct: 541 DEAKMLIQSMPMKPHGGVYGSLLNASRIHKRVGLGELAASKLFELEPQNPGNYVLLSNIY 600
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
AS+GRWEDVK+VRE MR GL+K VGMSWVEYKGQVHKF+VGDRSHE+SKDIY+LLAELE
Sbjct: 601 ASSGRWEDVKRVREMMRKRGLQKLVGMSWVEYKGQVHKFIVGDRSHEQSKDIYKLLAELE 660
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL+SEVGTPIRVVKNLRICL
Sbjct: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTPIRVVKNLRICL 720
Query: 721 DCHTAIKIISKLEEREIIVRDNNR 745
DCHTAIK+ISKLE REI+VRDNNR
Sbjct: 721 DCHTAIKMISKLEGREIVVRDNNR 744
BLAST of ClCG05G019460 vs. ExPASy TrEMBL
Match:
A0A6J1FMC6 (pentatricopeptide repeat-containing protein At1g14470 OS=Cucurbita moschata OX=3662 GN=LOC111446708 PE=3 SV=1)
HSP 1 Score: 1342.0 bits (3472), Expect = 0.0e+00
Identity = 660/744 (88.71%), Postives = 696/744 (93.55%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
MY+L AIA+KISNISQLRQLH HLVLNSL S NYWVSLLL ICTRLHAHP+YAASIF S
Sbjct: 1 MYDLVAIATKISNISQLRQLHAHLVLNSLQSQNYWVSLLLTICTRLHAHPSYAASIFTSS 60
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
P P+AS+YSCMLKYYSRMGA++EVVSLFRCMQ LDLRP P VYIYLIKLAGK GNLFHA
Sbjct: 61 PYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHAS 120
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG +DDHFIRNA+LDMYAKYGQVDLARKLFEQM RTLADWNSMISGCW SGNE DA
Sbjct: 121 VLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADA 180
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VMLFNMMP RN I+WTAMVTGYAK DLESARRYFDEMPE+SVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFNMMPDRNTISWTAMVTGYAKRRDLESARRYFDEMPEKSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EALKLFH+MLKEGITPDDTTWVA ISSCSSIGN LADS+L KINQKH ILNN+VKTALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQKHVILNNYVKTALL 300
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELGGQRNAVTWN+MISAYTR GKLSLARELFDNMPKRDVVSWN
Sbjct: 301 DMHAKFGNLEIARRIFDELGGQRNAVTWNVMISAYTRAGKLSLARELFDNMPKRDVVSWN 360
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMIAGYAQNGE+A SI LF+EMI CTDIQPDEVT+ASVLSACGHIGALK SYWVL+IVQE
Sbjct: 361 SMIAGYAQNGESAMSIHLFREMIDCTDIQPDEVTIASVLSACGHIGALKFSYWVLNIVQE 420
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIK GISGFNSLIF+YSKCG V DAHRIFQ M TKDVV+FNTLISGFAANGHGK+A+KL
Sbjct: 421 KNIKFGISGFNSLIFMYSKCGNVVDAHRIFQNMGTKDVVTFNTLISGFAANGHGKDAIKL 480
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
LTMEEEGIEPDHVTY GVLTACSHAG+LKEGK++FKSIK+PTVDHYACMVDLLGRAGEL
Sbjct: 481 LLTMEEEGIEPDHVTYIGVLTACSHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAGEL 540
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
DEAKILI+SMPM+PHAGVYGSLLN SRIHKRVELGELAANKL ELEPQNPGNY+LLSNIY
Sbjct: 541 DEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYILLSNIY 600
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
ASAGRWEDV++VREKMR GG+KKSVGMSWVEYKGQ+H F VGDRSHE SKDIYRLLAELE
Sbjct: 601 ASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAELE 660
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMKRVGFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRIC+
Sbjct: 661 RKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICM 720
Query: 721 DCHTAIKIISKLEEREIIVRDNNR 745
DCHTAIK+ISKLEEREIIVRDNNR
Sbjct: 721 DCHTAIKMISKLEEREIIVRDNNR 744
BLAST of ClCG05G019460 vs. ExPASy TrEMBL
Match:
A0A6J1IYP6 (pentatricopeptide repeat-containing protein At1g14470 OS=Cucurbita maxima OX=3661 GN=LOC111481104 PE=3 SV=1)
HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 660/744 (88.71%), Postives = 697/744 (93.68%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
MY+L AIA+KISNISQLRQLH HLVLNSL S NYWVSLLL ICTRLHAHPAYAASIF S
Sbjct: 1 MYDLVAIATKISNISQLRQLHAHLVLNSLQSQNYWVSLLLTICTRLHAHPAYAASIFTSS 60
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
P P+AS+YSCMLKYYSRMGA++EVVSLFRCMQ LDLRP P VYIYLIKLAGK GNLFHA
Sbjct: 61 PYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHAS 120
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG +DDHFIRN ILDMYAKYGQVDLARKLFEQM RTLADWNSMISGCW SGNE DA
Sbjct: 121 VLKLGHIDDHFIRNTILDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADA 180
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VMLF+MMP RN I+WTAMVTGYAKM DLE+ARRYFDEMPE+SVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFSMMPDRNTISWTAMVTGYAKMRDLETARRYFDEMPEKSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EALKLFH+MLKEGITPDDTTWVA ISSCSSIGN +LADS+L KINQKH ILNNFVKTALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVAAISSCSSIGNLSLADSLLAKINQKHVILNNFVKTALL 300
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELGGQRNAVTWN+MISAYTR GKLSLARELFDNMPKRDVVSWN
Sbjct: 301 DMHAKFGNLEIARGIFDELGGQRNAVTWNVMISAYTRAGKLSLARELFDNMPKRDVVSWN 360
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMIAGYAQNGE+A SI LF+EMI CTDIQPDEVT+ASVLSACGHIGALK S WVL+IVQE
Sbjct: 361 SMIAGYAQNGESAMSIHLFREMIDCTDIQPDEVTIASVLSACGHIGALKFSCWVLNIVQE 420
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIK GISGFNSLIF+YSKCG V DAHRIFQ M TKDVV+FNTLISGFAANGHGK+A+KL
Sbjct: 421 KNIKFGISGFNSLIFMYSKCGNVVDAHRIFQNMGTKDVVTFNTLISGFAANGHGKDAIKL 480
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
LTMEEEGIEPDHVTY GVLTACSHAG+LKEGK++FKSIK+PTVDHYACMVDLLGRAGEL
Sbjct: 481 LLTMEEEGIEPDHVTYIGVLTACSHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAGEL 540
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
D+AKILI+SMPM+PHAGVYGSLLNASRIHKRVELGELAANKL ELEPQNPGNY+LLSNIY
Sbjct: 541 DDAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAANKLLELEPQNPGNYILLSNIY 600
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
ASAGRWEDV++VREKMR GG+KKSVGMSWVEYKGQ+H F VGDRSHE SKDIYRLLAELE
Sbjct: 601 ASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAELE 660
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMKRVGFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRIC+
Sbjct: 661 RKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICM 720
Query: 721 DCHTAIKIISKLEEREIIVRDNNR 745
DCHTAIK+ISKLEEREIIVRDNNR
Sbjct: 721 DCHTAIKMISKLEEREIIVRDNNR 744
BLAST of ClCG05G019460 vs. ExPASy TrEMBL
Match:
A0A6J1BWI0 (pentatricopeptide repeat-containing protein At1g14470-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005962 PE=3 SV=1)
HSP 1 Score: 1328.5 bits (3437), Expect = 0.0e+00
Identity = 658/744 (88.44%), Postives = 696/744 (93.55%), Query Frame = 0
Query: 1 MYELRAIASKISNISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSL 60
M +L AI +KIS ISQLRQLH HLVLNSLHSHNYWVSLL+ +CT L AHPAYAASIF S
Sbjct: 1 MSKLGAIVTKISYISQLRQLHAHLVLNSLHSHNYWVSLLITLCTHLQAHPAYAASIFTSS 60
Query: 61 PSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAY 120
SP S+YSCMLKYYSRMGA+NEVVS+FRCMQ LDLRP PFVYIYLIKLAGK GNLFHAY
Sbjct: 61 TSPSVSVYSCMLKYYSRMGAHNEVVSIFRCMQCLDLRPHPFVYIYLIKLAGKSGNLFHAY 120
Query: 121 VLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDA 180
VLKLG +DDHF+RNAILDMYAKYGQVDLARKLFEQMA+RTLADWNSMISG WKSG E DA
Sbjct: 121 VLKLGHIDDHFVRNAILDMYAKYGQVDLARKLFEQMADRTLADWNSMISGYWKSGKEADA 180
Query: 181 VMLFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VMLFNMMPARNIITWTAMVTGYAKM DLESARRYFD+MPERSVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFNMMPARNIITWTAMVTGYAKMKDLESARRYFDQMPERSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALL 300
EALKLF QMLKEGI PDDTTWVA ISSCSS+GN +LAD I+RKINQKH ILNNFVKTALL
Sbjct: 241 EALKLFQQMLKEGIAPDDTTWVAAISSCSSVGNPSLADYIIRKINQKHIILNNFVKTALL 300
Query: 301 DMHAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWN 360
DMHAKFGNLE AR IFDELGGQRNAVTWNIMISAYTR GKL LARELFDNMPKRDVVSWN
Sbjct: 301 DMHAKFGNLEIAREIFDELGGQRNAVTWNIMISAYTRSGKLLLARELFDNMPKRDVVSWN 360
Query: 361 SMIAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE 420
SMIAGYAQNGE+A SIELF+EMI+CTDIQPDEVT+ASVLSACGHIGA KLSY V++IVQE
Sbjct: 361 SMIAGYAQNGESAMSIELFKEMITCTDIQPDEVTIASVLSACGHIGASKLSYLVVNIVQE 420
Query: 421 KNIKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKL 480
KNIKLGIS FNSLIF+YSKCG +A AHRIFQ M T+DVV+FNTLISGFAANG GKEA++L
Sbjct: 421 KNIKLGISAFNSLIFMYSKCGNMAHAHRIFQNMGTRDVVTFNTLISGFAANGRGKEAIEL 480
Query: 481 ALTMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLLGRAGEL 540
L MEEEGIEPDHVTY GVLTACSHAGLLKEGK++FKSIK+PTVDHYACMVDLLGRAGEL
Sbjct: 481 VLKMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAGEL 540
Query: 541 DEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
DEAKILIQSMPM+PHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY
Sbjct: 541 DEAKILIQSMPMKPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIY 600
Query: 601 ASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELE 660
ASAGRWEDVK VREKM+ G+KKSVGMSWVEYKGQVHKF+VGDRSHE S+DIYRLLAELE
Sbjct: 601 ASAGRWEDVKMVREKMKKVGVKKSVGMSWVEYKGQVHKFIVGDRSHEWSRDIYRLLAELE 660
Query: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
RKMKRVGFVADKSCALRDVEEEEKEEM+GTHSEKLAICFALLVSEVGTPIRVVKNLRICL
Sbjct: 661 RKMKRVGFVADKSCALRDVEEEEKEEMVGTHSEKLAICFALLVSEVGTPIRVVKNLRICL 720
Query: 721 DCHTAIKIISKLEEREIIVRDNNR 745
DCHTAIK++SKLEER I+VRDNNR
Sbjct: 721 DCHTAIKMVSKLEERVIVVRDNNR 744
BLAST of ClCG05G019460 vs. TAIR 10
Match:
AT1G14470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 573.5 bits (1477), Expect = 3.2e-163
Identity = 284/532 (53.38%), Postives = 384/532 (72.18%), Query Frame = 0
Query: 4 LRAIASKISNISQLRQLHGHL-VLNSLHSHNYWVSLLLIICTRLHAHPAYAASIFNSLPS 63
L AIAS+ QL Q+H L V NSL +YW S ++ CTRL A Y IF+S+
Sbjct: 9 LAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTF 68
Query: 64 PDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKYGNLFHAYVL 123
P+ + + M KY+S+M N+V+ L+ + P F + +IK AG++G LF A V
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVE 128
Query: 124 KLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDAVM 183
KLGF D ++RN I+DMY K+ V+ ARK+F+Q+++R +DWN MISG WK GN+ +A
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 184 LFNMMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAEEA 243
LF+MMP ++++WT M+TG+AK+ DLE+AR+YFD MPE+SVVSWNAMLS YAQN E+A
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 244 LKLFHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDM 303
L+LF+ ML+ G+ P++TTWV IS+CS + +L S+++ I++K LN FVKTALLDM
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 304 HAKFGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 363
HAK +++ AR IF+ELG QRN VTWN MIS YTR+G +S AR+LFD MPKR+VVSWNS+
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 364 IAGYAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQEKN 423
IAGYA NG+AA +IE F++MI D +PDEVT+ SVLSACGH+ L+L ++D +++
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ 428
Query: 424 IKLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLAL 483
IKL SG+ SLIF+Y++ G + +A R+F M+ +DVVS+NTL + FAANG G E + L
Sbjct: 429 IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLS 488
Query: 484 TMEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSIKSPTVDHYACMVDLL 535
M++EGIEPD VTYT VLTAC+ AGLLKEG+ +FKSI++P DHYACM DLL
Sbjct: 489 KMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYACM-DLL 539
BLAST of ClCG05G019460 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 498.4 bits (1282), Expect = 1.3e-140
Identity = 266/674 (39.47%), Postives = 394/674 (58.46%), Query Frame = 0
Query: 134 NAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDAVMLFNMMPARNII 193
N ++ Y + G+ +LARKLF++M ER L WN MI G ++ N A LF +MP R++
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 194 TWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLF------- 253
+W M++GYA+ G ++ AR FD MPE++ VSWNA+LSAY QN EEA LF
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 254 ---------------------------------------------------HQMLKEGIT 313
Q+ E
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 314 PDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDMHAKFGNLEFARTI 373
D TW A +S A + K+ +++ + N A+L + + +E A+ +
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN----AMLAGYVQGERMEMAKEL 338
Query: 374 FDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGEAAKS 433
FD + RN TWN MI+ Y + GK+S A+ LFD MPKRD VSW +MIAGY+Q+G + ++
Sbjct: 339 FDVM-PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 398
Query: 434 IELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQEKNIKLGISGFNSLIF 493
+ LF +M + + + +S LS C + AL+L + + + + G N+L+
Sbjct: 399 LRLFVQM-EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 458
Query: 494 LYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLALTMEEEGIEPDHVT 553
+Y KCG + +A+ +F+ M KD+VS+NT+I+G++ +G G+ A++ +M+ EG++PD T
Sbjct: 459 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 518
Query: 554 YTGVLTACSHAGLLKEGKDVFKSIKS-----PTVDHYACMVDLLGRAGELDEAKILIQSM 613
VL+ACSH GL+ +G+ F ++ P HYACMVDLLGRAG L++A L+++M
Sbjct: 519 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 578
Query: 614 PMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIYASAGRWEDVK 673
P EP A ++G+LL ASR+H EL E AA+K+F +EP+N G YVLLSN+YAS+GRW DV
Sbjct: 579 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 638
Query: 674 KVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELERKMKRVGFVA 733
K+R +MR+ G+KK G SW+E + + H F VGD H +I+ L EL+ +MK+ G+V+
Sbjct: 639 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 698
Query: 734 DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICLDCHTAIKIIS 745
S L DVEEEEKE M+ HSE+LA+ + ++ G PIRV+KNLR+C DCH AIK ++
Sbjct: 699 KTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMA 758
BLAST of ClCG05G019460 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 491.5 bits (1264), Expect = 1.6e-138
Identity = 270/746 (36.19%), Postives = 429/746 (57.51%), Query Frame = 0
Query: 14 ISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAH---PAYAASIFNSLPSPDASIYSC 73
+ LR +H ++ LH+ NY +S L+ C L H YA S+F ++ P+ I++
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCI-LSPHFEGLPYAISVFKTIQEPNLLIWNT 105
Query: 74 MLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIK-----LAGKYGNLFHAYVLKLG 133
M + ++ + L+ CM SL L P + + +++K A K G H +VLKLG
Sbjct: 106 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 165
Query: 134 FVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWKSGNETDAVMLFN 193
D ++ +++ MY + G+++ A K+F++
Sbjct: 166 CDLDLYVHTSLISMYVQNGRLEDAHKVFDK------------------------------ 225
Query: 194 MMPARNIITWTAMVTGYAKMGDLESARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKL 253
P R+++++TA++ GYA G +E+A++ FDE+P + VVSWNAM+S YA+ +EAL+L
Sbjct: 226 -SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 285
Query: 254 FHQMLKEGITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDMHAK 313
F M+K + PD++T V +S+C+ G+ L Q H +D H
Sbjct: 286 FKDMMKTNVRPDESTMVTVVSACAQSGSIELG-------RQVH---------LWIDDHGF 345
Query: 314 FGNLEFARTIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAG 373
NL+ N +I Y++ G+L A LF+ +P +DV+SWN++I G
Sbjct: 346 GSNLKIV----------------NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 405
Query: 374 YAQNGEAAKSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQE--KNI 433
Y +++ LFQEM+ + P++VT+ S+L AC H+GA+ + W+ + + K +
Sbjct: 406 YTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 465
Query: 434 KLGISGFNSLIFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLALT 493
S SLI +Y+KCG + AH++F ++ K + S+N +I GFA +G + L
Sbjct: 466 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 525
Query: 494 MEEEGIEPDHVTYTGVLTACSHAGLLKEGKDVFKSI-----KSPTVDHYACMVDLLGRAG 553
M + GI+PD +T+ G+L+ACSH+G+L G+ +F+++ +P ++HY CM+DLLG +G
Sbjct: 526 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 585
Query: 554 ELDEAKILIQSMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSN 613
EA+ +I M MEP ++ SLL A ++H VELGE A L ++EP+NPG+YVLLSN
Sbjct: 586 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 645
Query: 614 IYASAGRWEDVKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAE 673
IYASAGRW +V K R + + G+KK G S +E VH+F++GD+ H R+++IY +L E
Sbjct: 646 IYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 705
Query: 674 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRI 733
+E +++ GFV D S L+++EEE KE L HSEKLAI F L+ ++ GT + +VKNLR+
Sbjct: 706 MEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 726
Query: 734 CLDCHTAIKIISKLEEREIIVRDNNR 745
C +CH A K+ISK+ +REII RD R
Sbjct: 766 CRNCHEATKLISKIYKREIIARDRTR 726
BLAST of ClCG05G019460 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 487.6 bits (1254), Expect = 2.3e-137
Identity = 282/799 (35.29%), Postives = 437/799 (54.69%), Query Frame = 0
Query: 5 RAIASKISN---ISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHP--AYAASIF-N 64
+A S + N I +L+ H L L + ++ L+ L ++A +F N
Sbjct: 33 KATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 65 SLPSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGK-----Y 124
S +Y+ +++ Y+ G NE + LF M + + P + + + + K
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 125 GNLFHAYVLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWK 184
G H ++K+G+ D F++N+++ YA+ G++D ARK+F++M+ER + W SMI G +
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 185 SGNETDAVMLFNMM-----PARNIITWTAMVTGYAKMGDLES------------------ 244
DAV LF M N +T +++ AK+ DLE+
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 245 -----------------ARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLFHQMLKEG 304
A+R FDE ++ NAM S Y + EAL +F+ M+ G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 305 ITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDMHAKFGNLEFAR 364
+ PD + ++ ISSCS + N S + + + + AL+DM+ K + A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 365 TIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGEAA 424
IFD + + VTWN +++ Y G++ A E F+ MP++++VSWN++I+G Q
Sbjct: 393 RIFDRM-SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 452
Query: 425 KSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQEKNIKLGISGFNSL 484
++IE+F M S + D VT+ S+ SACGH+GAL L+ W+ +++ I+L + +L
Sbjct: 453 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 512
Query: 485 IFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLALTMEEEGIEPDH 544
+ ++S+CG A IF ++ +DV ++ I A G+ + A++L M E+G++PD
Sbjct: 513 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 572
Query: 545 VTYTGVLTACSHAGLLKEGKDVFKSI-----KSPTVDHYACMVDLLGRAGELDEAKILIQ 604
V + G LTACSH GL+++GK++F S+ SP HY CMVDLLGRAG L+EA LI+
Sbjct: 573 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 632
Query: 605 SMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIYASAGRWED 664
MPMEP+ ++ SLL A R+ VE+ AA K+ L P+ G+YVLLSN+YASAGRW D
Sbjct: 633 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 692
Query: 665 VKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELERKMKRVGF 724
+ KVR M+ GL+K G S ++ +G+ H+F GD SH +I +L E+ ++ +G
Sbjct: 693 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 752
Query: 725 VADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICLDCHTAIKI 748
V D S L DV+E+EK ML HSEKLA+ + L+ S GT IR+VKNLR+C DCH+ K
Sbjct: 753 VPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKF 812
BLAST of ClCG05G019460 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 487.6 bits (1254), Expect = 2.3e-137
Identity = 282/799 (35.29%), Postives = 437/799 (54.69%), Query Frame = 0
Query: 5 RAIASKISN---ISQLRQLHGHLVLNSLHSHNYWVSLLLIICTRLHAHP--AYAASIF-N 64
+A S + N I +L+ H L L + ++ L+ L ++A +F N
Sbjct: 33 KATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 65 SLPSPDASIYSCMLKYYSRMGANNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGK-----Y 124
S +Y+ +++ Y+ G NE + LF M + + P + + + + K
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 125 GNLFHAYVLKLGFVDDHFIRNAILDMYAKYGQVDLARKLFEQMAERTLADWNSMISGCWK 184
G H ++K+G+ D F++N+++ YA+ G++D ARK+F++M+ER + W SMI G +
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 185 SGNETDAVMLFNMM-----PARNIITWTAMVTGYAKMGDLES------------------ 244
DAV LF M N +T +++ AK+ DLE+
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 245 -----------------ARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLFHQMLKEG 304
A+R FDE ++ NAM S Y + EAL +F+ M+ G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 305 ITPDDTTWVATISSCSSIGNTTLADSILRKINQKHSILNNFVKTALLDMHAKFGNLEFAR 364
+ PD + ++ ISSCS + N S + + + + AL+DM+ K + A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 365 TIFDELGGQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGEAA 424
IFD + + VTWN +++ Y G++ A E F+ MP++++VSWN++I+G Q
Sbjct: 393 RIFDRM-SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 452
Query: 425 KSIELFQEMISCTDIQPDEVTVASVLSACGHIGALKLSYWVLDIVQEKNIKLGISGFNSL 484
++IE+F M S + D VT+ S+ SACGH+GAL L+ W+ +++ I+L + +L
Sbjct: 453 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 512
Query: 485 IFLYSKCGCVADAHRIFQTMETKDVVSFNTLISGFAANGHGKEAVKLALTMEEEGIEPDH 544
+ ++S+CG A IF ++ +DV ++ I A G+ + A++L M E+G++PD
Sbjct: 513 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 572
Query: 545 VTYTGVLTACSHAGLLKEGKDVFKSI-----KSPTVDHYACMVDLLGRAGELDEAKILIQ 604
V + G LTACSH GL+++GK++F S+ SP HY CMVDLLGRAG L+EA LI+
Sbjct: 573 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 632
Query: 605 SMPMEPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSNIYASAGRWED 664
MPMEP+ ++ SLL A R+ VE+ AA K+ L P+ G+YVLLSN+YASAGRW D
Sbjct: 633 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 692
Query: 665 VKKVREKMRNGGLKKSVGMSWVEYKGQVHKFVVGDRSHERSKDIYRLLAELERKMKRVGF 724
+ KVR M+ GL+K G S ++ +G+ H+F GD SH +I +L E+ ++ +G
Sbjct: 693 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 752
Query: 725 VADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRICLDCHTAIKI 748
V D S L DV+E+EK ML HSEKLA+ + L+ S GT IR+VKNLR+C DCH+ K
Sbjct: 753 VPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKF 812
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0057172.1 | 0.0e+00 | 87.13 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK27155... | [more] |
| KAG6608509.1 | 0.0e+00 | 84.66 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| XP_038898615.1 | 0.0e+00 | 91.67 | pentatricopeptide repeat-containing protein At1g14470 [Benincasa hispida] | [more] |
| XP_004147828.2 | 0.0e+00 | 89.65 | pentatricopeptide repeat-containing protein At1g14470, partial [Cucumis sativus] | [more] |
| XP_008454670.1 | 0.0e+00 | 88.98 | PREDICTED: pentatricopeptide repeat-containing protein At1g14470 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9M9R6 | 4.5e-162 | 53.38 | Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana OX... | [more] |
| Q9SY02 | 1.8e-139 | 39.47 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
| Q9LN01 | 2.2e-137 | 36.19 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| Q9LUJ2 | 3.2e-136 | 35.29 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
| Q3E6Q1 | 2.7e-127 | 34.82 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DV14 | 0.0e+00 | 87.13 | Transmembrane protein 147 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
| A0A1S3BZ59 | 0.0e+00 | 88.98 | pentatricopeptide repeat-containing protein At1g14470 OS=Cucumis melo OX=3656 GN... | [more] |
| A0A6J1FMC6 | 0.0e+00 | 88.71 | pentatricopeptide repeat-containing protein At1g14470 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1IYP6 | 0.0e+00 | 88.71 | pentatricopeptide repeat-containing protein At1g14470 OS=Cucurbita maxima OX=366... | [more] |
| A0A6J1BWI0 | 0.0e+00 | 88.44 | pentatricopeptide repeat-containing protein At1g14470-like isoform X1 OS=Momordi... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G14470.1 | 3.2e-163 | 53.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G02750.1 | 1.3e-140 | 39.47 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G08070.1 | 1.6e-138 | 36.19 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G22690.1 | 2.3e-137 | 35.29 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
| AT3G22690.2 | 2.3e-137 | 35.29 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
