
ClCG05G019440 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACACACCATCTTCCTTGCCTGACCTCTCCTTGCAGATCAGTCTTCCGATGTCCATGATGTTGACACCGCCGTGTGAGACGAAGGCCAAGCCACGGAGCTCAACCACCACGGATTCGAGTTGTAGTGGCAAAAGTGATTTGAGCCATGAAAATGGTCTCTTCCGTTTAGGGTTTGAAGTGGGAGATATGGATGTTCTTCCTCGCCGGCGTCATCATAATGTCCGTGGCCGCCGCGACTTCAAAAGAAGCGGTGGTGGTGTCGGGTGTGGAGTAAGAAGAAGCATCAGAGCTCCAAGAATGAGATGGACTACAACTCTACATGCTCATTTTGTACATGCTGTTCAGCTTCTTGGTGGCCATGAAAGTAAATTTAATTACTACACAACTACTTAATCGATCAATAACCCTAATCATATTTGTGTGATTCCATCATTCACATTTTCACCTAATTAATTCTTAGAACAAATTGTATAACAAATTATCACATGCAAAATTTCATTAATGCCCTTTCTTTTTCGATCTCTTTGATTCAGGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTTAAGGATCTAACCCTAGCTCACGTCAAAAGCCATTTACAGGTTGGTATGCCAAATAAATACTCTTTTAATCACTTAAAAAATCAATCCAAATAAACTCTTAAATTGTTGAGTTTAGCGACCGATTTAATGTCAAACAAAAAGTCCTTCATTTTCTTTCTTTTTTTTTTTTTAAGAACAAAAGTTCACTCTTTTATGTTTCTTTACTTTTTTCTTCCGCTTATAAAATAATTTAGGTTTCACATGAGGATTAATTTATTTTTAGTTTTCTATTTTTAAAAATTAGTTTGTTTGTGGGTTTTCATTGGATTTCAAAACCAAATTCTGAAAAAAAAAAAGAAAAAACTTTTTTAAAAAAACAATATTTCTATTTTAATTTTCACTAGGTTTGAGTTTGAGTTTTAACAACACTTTTAGGTAATCCATAACAAAATAAAAAAACTCAAGTATCTCCTTCAAACTAAGATAAAACTTTCAAACTAACAACACTTTATAACAAGATAAAACTTTCAAACTAATTTTTCAAGCTCTAACAAGGTTAATGATTAGTTGCGACCTATCTATCATGTATCTCCTTCTTGTAACATAGTAAATAATAATAATAATAATAATAATTTATTTTCTTTTTTAAAAAAATTTCCATACAAAAAATTTTCTTGGGATAATTGGTTGGGTTACACAAAGATAAATGTAGTGAAACCAATATCTAAGTTTTCTTCGTTCGAGAATATTAATAAGTAATTAAATGTATTTTATAGCTAGATGTAGTTGTAGTGGTGATTCCACATTGAGCAGCACAATGATGCTCCCTTCATTTTCCTTTTGGCTTCCCTAGAACTTCATTTTGTCAGTTAACATTTGATCTTATTCTAGAAAAGTTTTACAATTCCTTTTTCAAGATTCATTAGTATGGTAAGGGGTAAAAGAGAGAGTACAAAAGTTAAAGGACAAAAAAAGGCATCTAAAATCAGCAACAACAAGGCAAGGGCTTGTTAAAAACTAAACACACATTGTTTTGTTTTTGGTTTTGGTTGTTCATGCAGATGTACAGAACAGTGAAGAATACTGTGAAGGTAACAGGTAATTAAATTACAAACATTACTGTCTCTTTTATCTTCCACAAAAAAGACACTCTCTCTTTTATGTATACATTTTAATACAAACACTACGGTCTTTTCTTGCCTGTATGAAATTGAAGTTCTTTTTAGATCATCAACAGATGATGAATTATTGAGAACTGAAGTTCTTTATTTATTTATTTATTTTTTTTTTCTTGGGGGTAAAACTGTAAATGTTGCAGATGATTGTGGAAGGACTGAGATTGAAGAAGATGCCATTGTTTTATCTTCTTCTGTTCAAAAATCTAACTTTCAATCACCTCCTTTGCAGAGAATCCAAAGGTGAAATCATCTCCCTCTATGCTTCTCTGCTTTTACTTCTTCTAGACTCAAAAAAGTGATTTGACAACCATTTCACTTTTATGCTTCAAATCCTTGCTTTTATTTGTGAGAATAGTTGCAATTACAATCTCAAAATTTCTATGTAAAAATGGGACTCTCAACTTATATAAATATTAAAATTGAAATCTCAATCTTATAATAGTTGTAGAAACCTAAAATGAACACAAACTTTTGTTAGTTGACTTAAATGTCTTCGAGATGTAATTGATAATTTGTTTTCTTATCCACGCAATTAATAAATTGAAAAGCATTCGTTAAAGATTAAAATACTATTTCATTTACAAATGTTTAAATTATACTTATTATTTCGATAAATTTTATGATTAGTTTTGTTGATTTAAAAAGTTATATTGTATCAAATTTGTTAAACTAATAATAATACTTTGTATTCAAGAAAAGAGGTAATGTGAACAATTTATAGAAGAAAAGGATAATGGAGACTTTACTTAGAAAAAAAAGTTAACAATAAACCAACACCGATACTAATTTTAAGGATTAAATGAAACAAGTCTTAAACTCACTCGTATCCAAATTTAATATTTATCCCTTCATAAAACTGTTTTTTTTTCTTTTTTTTTTTTTTTTTCTCTCTCTCTCTTTTAAATCGTGAAATTTAGATTTTAAAAAAAAAAAAAAAAAAAACAATGAAATATAAACTTATTTCAAAGGAAACCAGGCTCGGAGGCTCCAACCTTGGACATTCCAATTATCTAGCTTCTTCGTGGTCTTAATTTAAAATGAATAGAATTTCAAATTTTAATAATTTTAAAATTTGAACTTCCTCTTGCGTGTAGAAGTAGTTTGGTAACATCAATGCACAAGAGTTGCGACAGGACCAAGTCAAACGCCGACGCTTTCGCTAAATCTAGAGGAATGAAGGTATAATAAATGATACAATACCATTTATTATTATTTTATTTCAATTCAAATATTGTGTATATTAAAAATAATTTAGCTAAATTAATATTGTTCTTTCTCGAGCTCACAACATTTCATTTTCACCTAATAAAATTTTGTTATTTAATTAAAAATGAAATTGTAAAAAATTAAGGTTACGTGGAAATTATTAAGTATAAAATGCTATCATTTTTTTTTCTTCAATTTGGTTATATTATAAAGTTTAATTTTTTTTTTCTAAATAATAAATATTATAGGTTGAAGGAAGCAATGGAGATTATCACGAGGCAATCACCATGCAACGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGGCAATTGGATTATGGTGATGCAAAAGAGCTTGCCCTTCTCAATTGCTAA ATGAACACACCATCTTCCTTGCCTGACCTCTCCTTGCAGATCAGTCTTCCGATGTCCATGATGTTGACACCGCCGTGTGAGACGAAGGCCAAGCCACGGAGCTCAACCACCACGGATTCGAGTTGTAGTGGCAAAAGTGATTTGAGCCATGAAAATGGTCTCTTCCGTTTAGGGTTTGAAGTGGGAGATATGGATGTTCTTCCTCGCCGGCGTCATCATAATGTCCGTGGCCGCCGCGACTTCAAAAGAAGCGGTGGTGGTGTCGGGTGTGGAGTAAGAAGAAGCATCAGAGCTCCAAGAATGAGATGGACTACAACTCTACATGCTCATTTTGTACATGCTGTTCAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTTAAGGATCTAACCCTAGCTCACGTCAAAAGCCATTTACAGATGTACAGAACAGTGAAGAATACTGTGAAGGTAACAGATGATTGTGGAAGGACTGAGATTGAAGAAGATGCCATTGTTTTATCTTCTTCTGTTCAAAAATCTAACTTTCAATCACCTCCTTTGCAGAGAATCCAAAGAAGTAGTTTGGTAACATCAATGCACAAGAGTTGCGACAGGACCAAGTCAAACGCCGACGCTTTCGCTAAATCTAGAGGAATGAAGGTTGAAGGAAGCAATGGAGATTATCACGAGGCAATCACCATGCAACGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGGCAATTGGATTATGGTGATGCAAAAGAGCTTGCCCTTCTCAATTGCTAA ATGAACACACCATCTTCCTTGCCTGACCTCTCCTTGCAGATCAGTCTTCCGATGTCCATGATGTTGACACCGCCGTGTGAGACGAAGGCCAAGCCACGGAGCTCAACCACCACGGATTCGAGTTGTAGTGGCAAAAGTGATTTGAGCCATGAAAATGGTCTCTTCCGTTTAGGGTTTGAAGTGGGAGATATGGATGTTCTTCCTCGCCGGCGTCATCATAATGTCCGTGGCCGCCGCGACTTCAAAAGAAGCGGTGGTGGTGTCGGGTGTGGAGTAAGAAGAAGCATCAGAGCTCCAAGAATGAGATGGACTACAACTCTACATGCTCATTTTGTACATGCTGTTCAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTTAAGGATCTAACCCTAGCTCACGTCAAAAGCCATTTACAGATGTACAGAACAGTGAAGAATACTGTGAAGGTAACAGATGATTGTGGAAGGACTGAGATTGAAGAAGATGCCATTGTTTTATCTTCTTCTGTTCAAAAATCTAACTTTCAATCACCTCCTTTGCAGAGAATCCAAAGAAGTAGTTTGGTAACATCAATGCACAAGAGTTGCGACAGGACCAAGTCAAACGCCGACGCTTTCGCTAAATCTAGAGGAATGAAGGTTGAAGGAAGCAATGGAGATTATCACGAGGCAATCACCATGCAACGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGGCAATTGGATTATGGTGATGCAAAAGAGCTTGCCCTTCTCAATTGCTAA MNTPSSLPDLSLQISLPMSMMLTPPCETKAKPRSSTTTDSSCSGKSDLSHENGLFRLGFEVGDMDVLPRRRHHNVRGRRDFKRSGGGVGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKVTDDCGRTEIEEDAIVLSSSVQKSNFQSPPLQRIQRSSLVTSMHKSCDRTKSNADAFAKSRGMKVEGSNGDYHEAITMQRINLEFTLGRPSWQLDYGDAKELALLNC Homology
BLAST of ClCG05G019440 vs. NCBI nr
Match: XP_038896529.1 (probable transcription factor KAN4 [Benincasa hispida]) HSP 1 Score: 442.2 bits (1136), Expect = 3.2e-120 Identity = 236/273 (86.45%), Postives = 243/273 (89.01%), Query Frame = 0
BLAST of ClCG05G019440 vs. NCBI nr
Match: XP_011652394.1 (probable transcription factor KAN4 [Cucumis sativus] >KGN59904.1 hypothetical protein Csa_001648 [Cucumis sativus]) HSP 1 Score: 424.5 bits (1090), Expect = 6.8e-115 Identity = 226/272 (83.09%), Postives = 238/272 (87.50%), Query Frame = 0
BLAST of ClCG05G019440 vs. NCBI nr
Match: XP_008454673.1 (PREDICTED: probable transcription factor KAN4 [Cucumis melo] >KAA0056721.1 putative transcription factor KAN4 [Cucumis melo var. makuwa] >TYK21185.1 putative transcription factor KAN4 [Cucumis melo var. makuwa]) HSP 1 Score: 418.7 bits (1075), Expect = 3.8e-113 Identity = 222/270 (82.22%), Postives = 234/270 (86.67%), Query Frame = 0
BLAST of ClCG05G019440 vs. NCBI nr
Match: XP_023535459.1 (probable transcription factor KAN4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 396.4 bits (1017), Expect = 2.0e-106 Identity = 214/276 (77.54%), Postives = 225/276 (81.52%), Query Frame = 0
BLAST of ClCG05G019440 vs. NCBI nr
Match: XP_022976047.1 (probable transcription factor KAN4 [Cucurbita maxima]) HSP 1 Score: 383.3 bits (983), Expect = 1.7e-102 Identity = 208/276 (75.36%), Postives = 220/276 (79.71%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.4e-46 Identity = 129/282 (45.74%), Postives = 159/282 (56.38%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29 Identity = 63/84 (75.00%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 9.5e-27 Identity = 96/256 (37.50%), Postives = 130/256 (50.78%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 122.1 bits (305), Expect = 9.5e-27 Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26 Identity = 73/135 (54.07%), Postives = 86/135 (63.70%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy TrEMBL
Match: A0A0A0LFY8 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852530 PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 3.3e-115 Identity = 226/272 (83.09%), Postives = 238/272 (87.50%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy TrEMBL
Match: A0A5A7UT98 (Putative transcription factor KAN4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1312G00080 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 1.8e-113 Identity = 222/270 (82.22%), Postives = 234/270 (86.67%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy TrEMBL
Match: A0A1S3C0D9 (probable transcription factor KAN4 OS=Cucumis melo OX=3656 GN=LOC103495027 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 1.8e-113 Identity = 222/270 (82.22%), Postives = 234/270 (86.67%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy TrEMBL
Match: A0A6J1IEP7 (probable transcription factor KAN4 OS=Cucurbita maxima OX=3661 GN=LOC111476566 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 8.5e-103 Identity = 208/276 (75.36%), Postives = 220/276 (79.71%), Query Frame = 0
BLAST of ClCG05G019440 vs. ExPASy TrEMBL
Match: A0A6J1F986 (probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111443475 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 7.9e-101 Identity = 207/276 (75.00%), Postives = 218/276 (78.99%), Query Frame = 0
BLAST of ClCG05G019440 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 187.2 bits (474), Expect = 1.7e-47 Identity = 129/282 (45.74%), Postives = 159/282 (56.38%), Query Frame = 0
BLAST of ClCG05G019440 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 163.7 bits (413), Expect = 2.0e-40 Identity = 106/184 (57.61%), Postives = 118/184 (64.13%), Query Frame = 0
BLAST of ClCG05G019440 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30 Identity = 63/84 (75.00%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of ClCG05G019440 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 122.1 bits (305), Expect = 6.8e-28 Identity = 96/256 (37.50%), Postives = 130/256 (50.78%), Query Frame = 0
BLAST of ClCG05G019440 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 120.2 bits (300), Expect = 2.6e-27 Identity = 73/135 (54.07%), Postives = 86/135 (63.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|