ClCG05G016830 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G016830
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Ubiquitin-like domain-containing protein
Location	CG_Chr05: 29142940 .. 29145583 (-)
RNA-Seq Expression	ClCG05G016830
Synteny	ClCG05G016830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCGACGGCATTTGCAGACTTGACGTCGTTGACTTTCCTCCCCCGCCAATGACGGTCGACAAGCATCGCAGATCGTTCTCGCTGCTTTCGTCTCCTTTGATGATCGTTGGGCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCTCATCAGCCTCTCATGCTTTCTGTCCTTAAATTGGACGGCTCTTGTTTCGGTAATTTCTGTTTCTGTGGCTTTGGATATTATTTTTATTTTTGTATGGATTAATCGAATTCGGTTTGGGGTAATTTGTGCTGATGCTGGAGATTACCATCTGTTTGTGAGTTTGTTTTTATGTCTGATTAAGGGCAGAGATATTGAAGGTTTTTCTATGTTCTTTTCTGTGGCTGTTATTTAAAAAAAGAAAAAAAACAAAAATTATACGGATTAATGGAATTCGGTTTGGGTTATTTGTGCTGATGCTGGAGATTATCATCATTGTTTTTATGTCTGATTAAGGGCAGAGACATTGAAGGTTTCTATGTTCTTTTCTGTTGTTTGGAGGACTTTTTTTTTTCTTCTTTTGGATTCATGGTTTTGAGGTATCTTCTTTTGCTTGAAATGTTAAGATTTGGCCACCGAAGTGAAAAAACTGATGTCCTAAATTTGAAGAATAAGAATGTCTTCATTGCGCCCTCTTTTAATATAGGAGTGTTGGGTTTTGACAAAGTATTAGAAGAGTAGTTGTCTCATATGTTCAAAAGAAGTGATAGATTCCCAACACCATAAAATAAGTTTATACCTTTGATTTCAAGTCATTCCAATTTGAAGCATTTTAAGCTTGGTATACTAGCTTGGCTGTGTGAATGGTATAATGTTTTGAGAGAATGTTCTTGTAATTGGGGTCGGGAGAGACATTTTTGTGTGATTGGAATAATTTTTCACATAATGGAGAATTTTTTATCCGTGGTTTTTCTCTAGTTTGGAGTTTTTCCACGTTAATTCTTATGTTCCTAATTTTATTGTTTTCTTTTAATTTCTTTGTTATTTTTTTGCTTATTCTTGCGGTAGTAGTGAGAGGTTTTTCCCAACATGGAGGACTTCAATGAATTGAGATGTTTGACACAGATATTCAAGTTAAGAGATCTGCTACTGTTGCTGAATTAAAGGGGGCAGTGGAGTCGGTCTTCAGCCACATGCCAGAGAATGGACCAGGAAAGATTTCATGGTTGGTTTATTTAATTATTTCACCATTTGATTGTAAGAATGAAATTACCCGTAATCCTTTGCCAGATCCTATTATGAAATTCCAGTTCCATGTGTTTATTTATCAATGCTGAGCCAAAACTAAGGATGATATTTTGATGGCATGTTGAAAATTTGAAGGAGATGCTTTATGGAACTACTTATCAGCTCTAAATTATCAACTTCCCAAGACTTTATCTACCTTATTCTTAACTTAACAAGAAAATTTAAATCTGGATATCTTTTCACTGTGACACAAAAGTTTATAGAAAGGGTACTTCTCAATTTAACTGTTTTCTGTTCTTGTTTGGTTCATGGAGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTCAAAAGTTGCTTGATGATGCGGACTACATTGCAAATTTTGGCATCAAGGATGGTGATCAGGTATGTAGTTAGTTGTGCTGTGCTTAATGATTTCAATTTCCTGTGAGGTCGGATCACTAGGTTTACCGACATGACATAAATCAAAGCACTATTTCCTTGAACAACAATTCCAGCTTCTTTAAATGAGTAACTGTTTTGTTGCTTATAATTGATTATTGATGCATTATTTGTGAATCTAGTTACTGTCAGGAATGTGCTTCCAGGATGTTAATGAAATATTAAAAGGAAGATTTGATGCTTTTGTTCACTGGATTTCCTTGTTTTAACATGTTCAGCTTCAGTTTGTCCGGCATGTAACAACTGGCTACAATGTTATAAGAAAACAGTCAAAGAAATGCCTGGTTTCCTCAAAACTGCTCAGTAGGTAAGACTCTTACCTCTTTAATAGTGATCCTTGATGGGGAAAAACAGTATTGACACAAAAACAGTTGGGGGCTTGGGCATTAAAATGAATTTCAAAGCTTGAGACAACAAAAAGCATCCATCTCGAAAGTGATAGAATATGCTGTTAGAAATTTTAGGTATTATATTGGACTAAGAAATCATATAAAAAATCCATTCCGTTAAGGTTTATTCACCTAAATAATGTACCTTTTTTTTATCATGGCTATCGTCGCTTCACCGATTCCTTGATTCCAATTGCCAATCTGTTCTGCTTACTATGGAATTCTAAATTCTCAGGATATCATCTCGGTCAAAAAGCCACAAGCAAAATGAACAGGAAGATATGGAAAGATATAACTGCAACGATATAGAGAGTGGAAGGTTTCAACATCATGGCAACAATGAGCTCTTCGTGAACCATGAGCCAAAGATGGTAGTCCTTTTGGGAGGATGGTTCTCTCACACCAAGCTGGCATCCGCAGGAAAGATGAGCATCAGTAGCCTGATTCGTCCATCGGGATCCCGTCCTAGCCTGGTGCGTGGTTTTAAGAATTTAATACAATTATGCCGTGAGAAAAGACATTATGAGAAAGTGAATAAAAAGAAGAGATCCATCATAGGAAGCTAA

mRNA sequence

ATGGCTGTCGACGGCATTTGCAGACTTGACGTCGTTGACTTTCCTCCCCCGCCAATGACGGTCGACAAGCATCGCAGATCGTTCTCGCTGCTTTCGTCTCCTTTGATGATCGTTGGGCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCTCATCAGCCTCTCATGCTTTCTGTCCTTAAATTGGACGGCTCTTGTTTCGATATTCAAGTTAAGAGATCTGCTACTGTTGCTGAATTAAAGGGGGCAGTGGAGTCGGTCTTCAGCCACATGCCAGAGAATGGACCAGGAAAGATTTCATGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTCAAAAGTTGCTTGATGATGCGGACTACATTGCAAATTTTGGCATCAAGGATGGTGATCAGCTTCAGTTTGTCCGGCATGTAACAACTGGCTACAATGTTATAAGAAAACAGTCAAAGAAATGCCTGGTTTCCTCAAAACTGCTCAGTAGGATATCATCTCGGTCAAAAAGCCACAAGCAAAATGAACAGGAAGATATGGAAAGATATAACTGCAACGATATAGAGAGTGGAAGGTTTCAACATCATGGCAACAATGAGCTCTTCGTGAACCATGAGCCAAAGATGGTAGTCCTTTTGGGAGGATGGTTCTCTCACACCAAGCTGGCATCCGCAGGAAAGATGAGCATCAGTAGCCTGATTCGTCCATCGGGATCCCGTCCTAGCCTGGTGCGTGGTTTTAAGAATTTAATACAATTATGCCGTGAGAAAAGACATTATGAGAAAGTGAATAAAAAGAAGAGATCCATCATAGGAAGCTAA

Coding sequence (CDS)

ATGGCTGTCGACGGCATTTGCAGACTTGACGTCGTTGACTTTCCTCCCCCGCCAATGACGGTCGACAAGCATCGCAGATCGTTCTCGCTGCTTTCGTCTCCTTTGATGATCGTTGGGCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCTCATCAGCCTCTCATGCTTTCTGTCCTTAAATTGGACGGCTCTTGTTTCGATATTCAAGTTAAGAGATCTGCTACTGTTGCTGAATTAAAGGGGGCAGTGGAGTCGGTCTTCAGCCACATGCCAGAGAATGGACCAGGAAAGATTTCATGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTCAAAAGTTGCTTGATGATGCGGACTACATTGCAAATTTTGGCATCAAGGATGGTGATCAGCTTCAGTTTGTCCGGCATGTAACAACTGGCTACAATGTTATAAGAAAACAGTCAAAGAAATGCCTGGTTTCCTCAAAACTGCTCAGTAGGATATCATCTCGGTCAAAAAGCCACAAGCAAAATGAACAGGAAGATATGGAAAGATATAACTGCAACGATATAGAGAGTGGAAGGTTTCAACATCATGGCAACAATGAGCTCTTCGTGAACCATGAGCCAAAGATGGTAGTCCTTTTGGGAGGATGGTTCTCTCACACCAAGCTGGCATCCGCAGGAAAGATGAGCATCAGTAGCCTGATTCGTCCATCGGGATCCCGTCCTAGCCTGGTGCGTGGTTTTAAGAATTTAATACAATTATGCCGTGAGAAAAGACATTATGAGAAAGTGAATAAAAAGAAGAGATCCATCATAGGAAGCTAA

Protein sequence

MAVDGICRLDVVDFPPPPMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQEDMERYNCNDIESGRFQHHGNNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRPSGSRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGS

Homology

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BLAST of ClCG05G016830 vs. NCBI nr
Match: XP_038899214.1 (uncharacterized protein LOC120086568 [Benincasa hispida])

HSP 1 Score: 511.9 bits (1317), Expect = 3.4e-141
Identity = 249/276 (90.22%), Postives = 264/276 (95.65%), Query Frame = 0


Query: 1   MAVDGICRLDVVDF----PPPPMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM 60
           MA+DG+C LDVV+F    PPPP TV+KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM
Sbjct: 1   MAIDGVCTLDVVEFPPPPPPPPTTVEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQK 120
           LSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMP+NGPGKISWLHVWWHFCLCYAGQK
Sbjct: 61  LSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWHFCLCYAGQK 120

Query: 121 LLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNE 180
           L+DDADYIANFGIKDGDQLQFVRHVTTGYN IRKQSKKC+VSSKLLSRIS RSK+++QN+
Sbjct: 121 LVDDADYIANFGIKDGDQLQFVRHVTTGYNAIRKQSKKCVVSSKLLSRISYRSKNYEQND 180

Query: 181 QEDMERYNCNDIESGRFQHHGNNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRP 240
           QEDMERYN NDIESGRFQHHGNNELF+NHEPKMVV LGGWFSHTKLASAGK  I+SL+RP
Sbjct: 181 QEDMERYNYNDIESGRFQHHGNNELFMNHEPKMVVFLGGWFSHTKLASAGKTRINSLVRP 240

Query: 241 SGSRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 273
           SG+RPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG
Sbjct: 241 SGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 276

[Close]

BLAST of ClCG05G016830 vs. NCBI nr
Match: XP_004136480.1 (uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical protein Csa_001701 [Cucumis sativus])

HSP 1 Score: 481.9 bits (1239), Expect = 3.7e-132
Identity = 242/276 (87.68%), Postives = 257/276 (93.12%), Query Frame = 0


Query: 1   MAVDGICRLDVVDFPP--PPMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDG+C LDVVDFPP     T +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLL 120
           VLKLDGS FDIQV+RSATVAELKGAVE VFSHMP++GPGKISWLHVWWHFCLCYAGQKL+
Sbjct: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120

Query: 121 DDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQE 180
           DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK +VSSKL+SRISSRSKS KQN+Q+
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNCNDIESGRFQHHG--NNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRP 240
           DMERYN NDIESGR QH G  NN+LF+NHEPKMVV LGGWFSHTKLASAGKMSI SL+RP
Sbjct: 181 DMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240

Query: 241 SGSRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 273
           S +RPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG
Sbjct: 241 SVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 276

[Close]

BLAST of ClCG05G016830 vs. NCBI nr
Match: KAA0038816.1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 475.3 bits (1222), Expect = 3.5e-130
Identity = 241/276 (87.32%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MAVDGICRLDVVDFPPP--PMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDG+C LDVVDFPPP    T +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLL 120
           VLKLDGSCFDIQV+RSATVAELKGAVE VFSHMP+NGPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQE 180
           DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS KQN+Q+
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--CNDIESGRFQHHGNNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRP 240
           DMERYN   NDIESGR QH+GNN+LFVN +PKMVV LGGWFSHTKLASAGKMSI SL+RP
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNNDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240

Query: 241 SGSRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 273
           S +RPSLV G KNLIQLCREKRHYEKVNKKKRSIIG
Sbjct: 241 SVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIG 275

[Close]

BLAST of ClCG05G016830 vs. NCBI nr
Match: XP_008466420.1 (PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 473.4 bits (1217), Expect = 1.3e-129
Identity = 240/276 (86.96%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MAVDGICRLDVVDFPPP--PMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDG+C LDVVDFPPP    T +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLL 120
           VLKLDGSCFDIQV+RSATVAELKGAVE VFSHMP+NGPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQE 180
           DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS KQN+Q+
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--CNDIESGRFQHHGNNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRP 240
           DMERYN   NDIESGR QH+GN++LFVN +PKMVV LGGWFSHTKLASAGKMSI SL+RP
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240

Query: 241 SGSRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 273
           S +RPSLV G KNLIQLCREKRHYEKVNKKKRSIIG
Sbjct: 241 SVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIG 275

[Close]

BLAST of ClCG05G016830 vs. NCBI nr
Match: XP_023535364.1 (uncharacterized protein LOC111796829 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456.1 bits (1172), Expect = 2.2e-124
Identity = 230/270 (85.19%), Postives = 245/270 (90.74%), Query Frame = 0


Query: 1   MAVDGICRLDVVDFPPPPMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVL 60
           MAVDG  +LD  DFPPP  TV+K+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLSVL
Sbjct: 1   MAVDGFGKLDASDFPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVL 60

Query: 61  KLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLLDD 120
           KLDGSCFDIQVKRSATVAELKGAVESVFSHMP+NGPGKISWLHVWW+FCLCYAGQKL+DD
Sbjct: 61  KLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDD 120

Query: 121 ADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQEDM 180
            DYIANFGIKDGDQLQFVRHVTTGYNV+RKQSKK +VSSKLLSRISSRSKS+KQNE+EDM
Sbjct: 121 TDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNEKEDM 180

Query: 181 ERYNCNDIESGRFQHHGNNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRPSGSR 240
           ERY  ND ESGRFQHHGNN      EP++V+ LGGWFSH K AS GK SI+SL RPSGSR
Sbjct: 181 ERY-YNDAESGRFQHHGNN------EPRVVLFLGGWFSHNKQASTGKRSINSLARPSGSR 240

Query: 241 PSLVRGFKNLIQLCREKRHYEKVNKKKRSI 271
           PSLVRGFKNLIQLCREKRHYEKVNK KRSI
Sbjct: 241 PSLVRGFKNLIQLCREKRHYEKVNKNKRSI 263

[Close]

BLAST of ClCG05G016830 vs. ExPASy Swiss-Prot
Match: Q84WS8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 55  LMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPG--KISWLHVWWHFCLCY 114
           + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M +   G   ISW HVW +FCL  
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 115 AGQKLLDDADYIANFGIKDGDQLQFVRHV 142
             +KLLDD   + + GI++  Q+ F+ +V
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140

[Close]

BLAST of ClCG05G016830 vs. ExPASy Swiss-Prot
Match: Q9BV90 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.5e-08
Identity = 30/89 (33.71%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 53  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESV--FSHMPENGPGKISWLHVWWHFCL 112
           Q + + V K+DG    + V +SATV +LK A++         E G   ISW +VW  + L
Sbjct: 39  QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 98

Query: 113 CYAGQKLLDDADYIANFGIKDGDQLQFVR 140
             AG+KL +D   + ++GI++ D++ F++
Sbjct: 99  TSAGEKLTEDRKKLRDYGIRNRDEVSFIK 127

[Close]

BLAST of ClCG05G016830 vs. ExPASy Swiss-Prot
Match: Q8VIK1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-08
Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 53  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESV--FSHMPENGPGKISWLHVWWHFCL 112
           Q + + V K+DG    + V ++ATV +LK A++         E G   ISW +VW  + L
Sbjct: 30  QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 89

Query: 113 CYAGQKLLDDADYIANFGIKDGDQLQFVR 140
             AG+KL +D   + ++GI++ D++ F++
Sbjct: 90  TSAGEKLTEDRKKLRDYGIRNRDEVSFIK 118

[Close]

BLAST of ClCG05G016830 vs. ExPASy Swiss-Prot
Match: Q3ZBQ4 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 53  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESV--FSHMPENGPGKISWLHVWWHFCL 112
           Q + + V K+DG    + V ++ATV +LK A++         E G   ISW +VW  + L
Sbjct: 30  QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHL 89

Query: 113 CYAGQKLLDDADYIANFGIKDGDQLQFVR 140
             AG+KL +D   + ++GI++ D++ F++
Sbjct: 90  TSAGEKLTEDRKKLRDYGIRNRDEVSFIK 118

[Close]

BLAST of ClCG05G016830 vs. ExPASy TrEMBL
Match: A0A0A0LH97 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877630 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.8e-132
Identity = 242/276 (87.68%), Postives = 257/276 (93.12%), Query Frame = 0


Query: 1   MAVDGICRLDVVDFPP--PPMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDG+C LDVVDFPP     T +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLL 120
           VLKLDGS FDIQV+RSATVAELKGAVE VFSHMP++GPGKISWLHVWWHFCLCYAGQKL+
Sbjct: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120

Query: 121 DDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQE 180
           DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK +VSSKL+SRISSRSKS KQN+Q+
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNCNDIESGRFQHHG--NNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRP 240
           DMERYN NDIESGR QH G  NN+LF+NHEPKMVV LGGWFSHTKLASAGKMSI SL+RP
Sbjct: 181 DMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240

Query: 241 SGSRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 273
           S +RPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG
Sbjct: 241 SVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 276

[Close]

BLAST of ClCG05G016830 vs. ExPASy TrEMBL
Match: A0A5A7T9I3 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003750 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.7e-130
Identity = 241/276 (87.32%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MAVDGICRLDVVDFPPP--PMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDG+C LDVVDFPPP    T +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLL 120
           VLKLDGSCFDIQV+RSATVAELKGAVE VFSHMP+NGPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQE 180
           DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS KQN+Q+
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--CNDIESGRFQHHGNNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRP 240
           DMERYN   NDIESGR QH+GNN+LFVN +PKMVV LGGWFSHTKLASAGKMSI SL+RP
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNNDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240

Query: 241 SGSRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 273
           S +RPSLV G KNLIQLCREKRHYEKVNKKKRSIIG
Sbjct: 241 SVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIG 275

[Close]

BLAST of ClCG05G016830 vs. ExPASy TrEMBL
Match: A0A5D3E6G8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007520 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.4e-130
Identity = 240/276 (86.96%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MAVDGICRLDVVDFPPP--PMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDG+C LDVVDFPPP    T +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLL 120
           VLKLDGSCFDIQV+RSATVAELKGAVE VFSHMP+NGPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQE 180
           DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS KQN+Q+
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--CNDIESGRFQHHGNNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRP 240
           DMERYN   NDIESGR QH+GN++LFVN +PKMVV LGGWFSHTKLASAGKMSI SL+RP
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240

Query: 241 SGSRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 273
           S +RPSLV G KNLIQLCREKRHYEKVNKKKRSIIG
Sbjct: 241 SVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIG 275

[Close]

BLAST of ClCG05G016830 vs. ExPASy TrEMBL
Match: A0A1S3CR65 (uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.4e-130
Identity = 240/276 (86.96%), Postives = 255/276 (92.39%), Query Frame = 0


Query: 1   MAVDGICRLDVVDFPPP--PMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDG+C LDVVDFPPP    T +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLL 120
           VLKLDGSCFDIQV+RSATVAELKGAVE VFSHMP+NGPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQE 180
           DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS KQN+Q+
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--CNDIESGRFQHHGNNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRP 240
           DMERYN   NDIESGR QH+GN++LFVN +PKMVV LGGWFSHTKLASAGKMSI SL+RP
Sbjct: 181 DMERYNYKYNDIESGRCQHNGNDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240

Query: 241 SGSRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIG 273
           S +RPSLV G KNLIQLCREKRHYEKVNKKKRSIIG
Sbjct: 241 SVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIG 275

[Close]

BLAST of ClCG05G016830 vs. ExPASy TrEMBL
Match: A0A6J1FBK4 (uncharacterized protein LOC111442589 OS=Cucurbita moschata OX=3662 GN=LOC111442589 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 9.0e-124
Identity = 229/270 (84.81%), Postives = 244/270 (90.37%), Query Frame = 0


Query: 1   MAVDGICRLDVVDFPPPPMTVDKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVL 60
           MAVDG  +LD    PPP  TV+K+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLSVL
Sbjct: 1   MAVDGFGKLDAAHSPPPMTTVEKNRRSPSLLSSPLMIVGLSKKNVLYRQLPHQPLMLSVL 60

Query: 61  KLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLLDD 120
           KLDGSCFDIQVKRSATVAELKGAVESVFSHMP+NGPGKISWLHVWW+FCLCYAGQKL+DD
Sbjct: 61  KLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWYFCLCYAGQKLVDD 120

Query: 121 ADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKLLSRISSRSKSHKQNEQEDM 180
            DYIANFGIKDGDQLQFVRHVTTGYNV+RKQSKK +VSSKLLSRISSRSKS+KQN++EDM
Sbjct: 121 TDYIANFGIKDGDQLQFVRHVTTGYNVMRKQSKKWVVSSKLLSRISSRSKSYKQNDKEDM 180

Query: 181 ERYNCNDIESGRFQHHGNNELFVNHEPKMVVLLGGWFSHTKLASAGKMSISSLIRPSGSR 240
           ERY  ND ESGRFQHHGNN      EPK+V+ LGGWFSHTK AS GK SI+SL RPSGSR
Sbjct: 181 ERY-YNDAESGRFQHHGNN------EPKVVLFLGGWFSHTKQASTGKRSINSLARPSGSR 240

Query: 241 PSLVRGFKNLIQLCREKRHYEKVNKKKRSI 271
           PSLVRGFKNLIQLCREKRHYEKVNK KRSI
Sbjct: 241 PSLVRGFKNLIQLCREKRHYEKVNKNKRSI 263

[Close]

BLAST of ClCG05G016830 vs. TAIR 10
Match: AT4G32270.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34
Identity = 80/174 (45.98%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 12  VDFPPPPMTVDKHRRSFSLLSSPLMIV-GLSRKNVL-YRQLPHQPLMLSVLKLDGSCFDI 71
           +D PP        RRS +   SPL ++ GL R+    Y Q+P +P+ L+VLKLDGS F I
Sbjct: 1   MDVPP--------RRSLAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGI 60

Query: 72  QVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFCLCYAGQKLLDDADYIANFGI 131
           QV ++ATV ELK AVE+ FSH+P +GPGKISW HVW  FCL Y  ++L+++++Y+  FGI
Sbjct: 61  QVLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFCLSYEDKRLINESEYLTEFGI 120

Query: 132 KDGDQLQFVRHVTT-GYNVIRKQSKKCLVSS-KLLSRISSRSKSHKQNEQEDME 182
           KDGDQL+F+RH++     +++ +SK   VSS K L   S+  ++ K+N   ++E
Sbjct: 121 KDGDQLRFIRHISNYCMLMVKHKSKTPRVSSFKQLKLFSTTPETRKKNVIREVE 166

[Close]

BLAST of ClCG05G016830 vs. TAIR 10
Match: AT5G25340.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-32
Identity = 69/150 (46.00%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 42  RKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISW 101
           R+   Y +LP++P+ LSVLKLDGS FD+ V  SATV +LK A+E+ FSH+P+ GP KISW
Sbjct: 6   RRTFSYDKLPNEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGPSKISW 65

Query: 102 LHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVSSKL 161
            HVW HFCLC+ GQKL+ D D I N+G+KDGD+++F  HV+    + +  S+K     K 
Sbjct: 66  SHVWGHFCLCFGGQKLITDTDCIGNYGMKDGDEVRFKNHVSGNAVLSKGYSRKS--KQKN 125

Query: 162 LSRISSRSKSHKQNEQEDMERYNCNDIESG 192
           L R+  +      N  E+++  + +D+E G
Sbjct: 126 LERVLPKDGDEVLNRIEEIDD-SWDDLERG 152

[Close]

BLAST of ClCG05G016830 vs. TAIR 10
Match: AT4G32270.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-28
Identity = 64/134 (47.76%), Postives = 95/134 (70.90%), Query Frame = 0


Query: 50  LPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGKISWLHVWWHFC 109
           +P +P+ L+VLKLDGS F   V ++ATV ELK AVE+ FSH+P +GPGKISW HVW  FC
Sbjct: 1   MPEEPIKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFC 60

Query: 110 LCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTT-GYNVIRKQSKKCLVSS-KLLSRISS 169
           L Y  ++L+++++Y+  FGIKDGDQL+F+RH++     +++ +SK   VSS K L   S+
Sbjct: 61  LSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSKTPRVSSFKQLKLFST 120

Query: 170 RSKSHKQNEQEDME 182
             ++ K+N   ++E
Sbjct: 121 TPETRKKNVIREVE 131

[Close]

BLAST of ClCG05G016830 vs. TAIR 10
Match: AT1G80060.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-25
Identity = 74/198 (37.37%), Postives = 108/198 (54.55%), Query Frame = 0


Query: 40  LSRKNVLYRQLPHQ-PLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPGK 99
           +S +   Y +LP Q  + LSV+KL+GS FD++V +  +VAELK AVE VF+  P  G G 
Sbjct: 37  ISGRRSSYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLEGHGM 96

Query: 100 ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCLVS 159
           ISW HVW HFCLCY  Q+L++D   I   G+ DGDQL FVRH++  ++ + K+SK     
Sbjct: 97  ISWSHVWGHFCLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHLSIDHSPMNKRSKSPSCK 156

Query: 160 SKLLSRISS-----RSKSHKQNEQEDMERYNCNDIESGRFQHHGNNELFVNHEPKMVVLL 219
             L   +SS     + ++  QN  +D+    C         + G  +     E ++V L+
Sbjct: 157 RYLELDVSSIVNEIQIQNQNQNGVDDVAE-KC---------YPGAQDELPAAESRLVNLI 216

Query: 220 GGWFSHTKLASAGKMSIS 232
            GW     L  AG+  +S
Sbjct: 217 KGW-----LPYAGRWGVS 219

[Close]

BLAST of ClCG05G016830 vs. TAIR 10
Match: AT3G07860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-12
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 55  LMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPENGPG--KISWLHVWWHFCLCY 114
           + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M +   G   ISW HVW +FCL  
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 115 AGQKLLDDADYIANFGIKDGDQLQFVRHV 142
             +KLLDD   + + GI++  Q+ F+ +V
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140

The following BLAST results are available for this feature:

BLAST of ClCG05G016830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899214.1	3.4e-141	90.22	uncharacterized protein LOC120086568 [Benincasa hispida]	[more]
XP_004136480.1	3.7e-132	87.68	uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical ...	[more]
KAA0038816.1	3.5e-130	87.32	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. m...	[more]
XP_008466420.1	1.3e-129	86.96	PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U...	[more]
XP_023535364.1	2.2e-124	85.19	uncharacterized protein LOC111796829 [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG05G016830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WS8	1.5e-11	40.45	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana O...	[more]
Q9BV90	3.5e-08	33.71	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 G...	[more]
Q8VIK1	6.0e-08	32.58	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 ...	[more]
Q3ZBQ4	1.0e-07	32.58	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=...	[more]

BLAST of ClCG05G016830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH97	1.8e-132	87.68	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877...	[more]
A0A5A7T9I3	1.7e-130	87.32	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A5D3E6G8	6.4e-130	86.96	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A1S3CR65	6.4e-130	86.96	uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=...	[more]
A0A6J1FBK4	9.0e-124	84.81	uncharacterized protein LOC111442589 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]

BLAST of ClCG05G016830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32270.1	1.7e-34	45.98	Ubiquitin-like superfamily protein	[more]
AT5G25340.1	1.2e-32	46.00	Ubiquitin-like superfamily protein	[more]
AT4G32270.2	3.1e-28	47.76	Ubiquitin-like superfamily protein	[more]
AT1G80060.1	1.5e-25	37.37	Ubiquitin-like superfamily protein	[more]
AT3G07860.1	1.1e-12	40.45	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040610	SNRNP25, ubiquitin-like domain	PFAM	PF18036	Ubiquitin_4	coord: 57..141 e-value: 8.8E-26 score: 89.8
IPR040610	SNRNP25, ubiquitin-like domain	CDD	cd17058	Ubl_SNRNP25	coord: 55..140 e-value: 2.29063E-33 score: 114.923
None	No IPR available	GENE3D	3.10.20.90		coord: 51..146 e-value: 3.5E-34 score: 118.7
None	No IPR available	PANTHER	PTHR14942:SF2	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 8..264
IPR039690	U11/U12 small nuclear ribonucleoprotein 25kDa protein	PANTHER	PTHR14942	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN	coord: 8..264
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 55..144 score: 9.090439
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 51..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G016830.2	ClCG05G016830.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex
molecular_function	GO:0005515	protein binding