ClCG05G016110 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG05G016110
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProtein FAM33A
LocationCG_Chr05: 28273181 .. 28279952 (+)
RNA-Seq ExpressionClCG05G016110
SyntenyClCG05G016110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATTTATCCCGATAGCGTAAGATCAACACGATCTCTTTCTTTTTCTTCTTCTTCTTCTTATTCTCGTTGATTGAATCAAGGCACTAATTAGATTAAGGAGGAAGTTCTAGGGCGTGAAATGAATGTGGAATTGTTTATTTCTCTCTTTCATGTTGGTATTTCACAGTGCAAGTACCAGATCTTTGAGCTTAATGTAGAATTACTTCATTCTACAGCATGAGAGCATCATTGGCTTTCTCTATCTTCTTAATCGAGGCACTGTTTGGTTTGAGGATGGAGTTGGAGATCTGGAGCTCAATGTTTGACCTATTTTGTTCTTTCTTTGCCGTTATTTCACTGTACTAACACAAGATCATGAGCTTAATTTAGAATTATTCAATTCGAATGCGTAGGAGCAAGTAATTTATCCTGACACAGTAAGAGCAACATACGTTTTCCTTCTTCTAATTCTCCTTCTGATTGGAGGCACTATTTGGATTGAGGAGGACATACGAGTTCTTGAGCTTTTCGGAAAATTTGTTCACCCATAATTTCTTTTCATCTTCGAAATTCTGATTCTAGTAAGCTTTTTGATGCTCAGTAAAATGTCTGATTATTGCTGTTCGTTTCTCTACTATGTATGCAACTATGTGACAGTGAAAATGGATTCAAACACTCTTTATGATAGAGGTTGTTTGGCCTTTGTTTGACGGTTGAGATTAGAAATCCTCTTAGAACATATAATGGGCACGGGGCTTAAATATGTCAGTAGAAAGTATATGTCGCGGCAGCACAAAGTTAACCACGTATTAACGTGGAATTCGATCTCATATTTTCTTTCATATTCTTTCTAGAAAAATACAAATATGAATCTGTTGTTGATCAGGTGGTGGTCTTCATTCAAGATTTTGTGAATTGTTTGCAGGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAAATACGAGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGTACTTTTCTTCATTTACTTTCTTTGGAAAAGTATTGACTAGAGGAAACACACGCATTTACTTTTCCTCATCTTTTTTTTCTTTCTTCCAAGAATTAGTCGTCAACTCCATTTCACTTAGATTCCATGTGATGAAATGTTGATATATTATATCTAGAAAAATGAAAATATGAAGTTTGGGAATGTGATGGATGATGATAACAGGATGAATGTATTTAGTGGGTGGAAATGTGATCTAGATTTTTATCATATATAACTTAAAATCTAATGATATGTTTCATAATATTTATATCGAGAATATTTTGTTTAACATATTACGCACACTGTATTCAAAATTATTTCTAGCAAATAATTTTAATTGAAACTAAGGTTTCTTTCAATAACCATTTTATTTTTAGTTTTAGGATTTTAAAATTTATGTTGGTTCGTTCTCAATATTTTTTACTATGGTTTTCACTTTTCTTAGAGAAATATTTGAACTCTTAGTCAAATACCCAAAATAAAAATAAGTTTTTAAAACTACTTTTTTAAGTTTTCAAAATTTGGTTTAGAATAATATTGGTAGGATGTGGAATGACAAAACAAAGGAACTTATAGGTAGGATGGTAGTGTAAAGTGTTTATAAGCTTAATTTTTAAAAATTAAAACTAAGACCCTCTTTAAAAATCATTTGATTTGTATTTATTTTTGTTTTCTTTTCTTTTGAAAATAAAACTACTATTCCAGCAAAAACTAAGTCAAGTTTTGATAGAAAAACAGAATTTTAGCGAACGTCTTGATAGTTGGCGCATCTTTTACTCTTCTATCGGAGGGCAAGGATTGAGATAGACATTGGTAATTGGAGCAAACTGAAGTCGATTGATCCCGATACCTACTACTTATTATTTCTAGGAGGAATGACCCTGACATGTACTGTAGTTATTCTTGTTCTGGAACTGATATTCAGTGATTTCAATACCTATTGCTAATTTATGCAACGACGATGTGCTGTTCAATTACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATCCTGCATTTGCGCAATTCAAGCAGGTATTCATTGTTAATGTCCCTTGGTTTGCATTTTGTGGTCAGTACTCGTACAACGCATTGATTATTCCTTTGGCATAAGCCTGAATTTTTGGAACTCCTCTTCTCTGTGTCATTTCGTTTTCCACTTAACTAGTACAAGGTTTTTATTTATTCAAAATTTTGTTCTTCTTTAGCTATTGGAAAGATTAACACAGTAAAATGGACATTTTAGCTATTTTTGTCTCAAGTGTTCTATCATCTGCTTTATTGTGATTTAACAGGGTTGCAATTTCCAAATGGTGCTTATAGTGTTTGTACCATTTGCCAGCAAGCAACCAATATTAAATATGCAAAAGGCTTTTCTTACGATTGAATATCCACATTAGAGAGTATGTGGGTCTTTCGATCTCTTGAATAAAGCGTACACAACCAAATGTCTCACCCTCTCCATGTAGAAGCGTCGTGTTTTTAAGTACTTGCAGAGTCATTGTTTAATGCTAAACCATTTCCTGATTTCCTCTCCTGCAGATCACTGAAGAGTGGACGACACAAGTTCAATCAAAATTTGGTACGGATTCTTTTCAAGCTTTCTACAGACATTTCTGATAAAAGTAAATTGTTTGTGCTTCTTGTTTGCAAAAGTGGTATGTATATTTCGTTACTTGCTCCTTTACCATCTACATTTAGAACCAGAATTCCAAATTTCAACCTTCCCGGTAAAAATGCAAGTCACGACCGGTGGAACCACCGATTACAGGATTTTTTCCCCTCATGTGGCAGGTGGAGTCATCAAACTTATTTCGAAGTCCGACAATATAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

ATGGGGCTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATTTATCCCGATAGCCATGAGAGCATCATTGGCTTTCTCTATCTTCTTAATCGAGGCACTGTTTGGTTTGAGGATGGAGTTGGAGATCTGGAGCTCAATGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAAATACGAGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATCCTGCATTTGCGCAATTCAAGCAGATCACTGAAGAGTGGACGACACAAGTTCAATCAAAATTTGAACCAGAATTCCAAATTTCAACCTTCCCGGTAAAAATGCAAGTCACGACCGGTGGAACCACCGATTACAGGATTTTTTCCCCTCATGTGGCAGGGGAAGACGGCCAAGAGGACGCGGACTGTGATGACGTCAACAAGTTGCTATTCTCGGCGGTAGTGCAGGCATGA

Coding sequence (CDS)

ATGGGGCTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATTTATCCCGATAGCCATGAGAGCATCATTGGCTTTCTCTATCTTCTTAATCGAGGCACTGTTTGGTTTGAGGATGGAGTTGGAGATCTGGAGCTCAATGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAAATACGAGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATCCTGCATTTGCGCAATTCAAGCAGATCACTGAAGAGTGGACGACACAAGTTCAATCAAAATTTGAACCAGAATTCCAAATTTCAACCTTCCCGGTAAAAATGCAAGTCACGACCGGTGGAACCACCGATTACAGGATTTTTTCCCCTCATGTGGCAGGGGAAGACGGCCAAGAGGACGCGGACTGTGATGACGTCAACAAGTTGCTATTCTCGGCGGTAGTGCAGGCATGA

Protein sequence

MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRGTVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQA
Homology
[Close]
BLAST of ClCG05G016110 vs. NCBI nr
Match: XP_038898183.1 (spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1 spindle and kinetochore-associated protein 2 [Benincasa hispida])

HSP 1 Score: 265.8 bits (678), Expect = 3.3e-67
Identity = 149/215 (69.30%), Postives = 153/215 (71.16%), Query Frame = 0 

Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRGT 60
           M LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYP+S               
Sbjct: 1   MVLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPES--------------- 60

Query: 61  VWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120
                        ANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN
Sbjct: 61  -------------ANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120

Query: 121 MLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGT 180
           MLQK+QASMGVPFVSDLDDPAFA+FKQITEEWT QVQSKF                    
Sbjct: 121 MLQKLQASMGVPFVSDLDDPAFAEFKQITEEWTRQVQSKF-------------------- 156

Query: 181 TDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQA 216
                      GEDGQEDAD +DVNKLLFSAVVQA
Sbjct: 181 -----------GEDGQEDADYNDVNKLLFSAVVQA 156

[Close]
BLAST of ClCG05G016110 vs. NCBI nr
Match: KAG7024402.1 (hypothetical protein SDJN02_13216, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264.2 bits (674), Expect = 9.6e-67
Identity = 150/214 (70.09%), Postives = 156/214 (72.90%), Query Frame = 0 

Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRGT 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS       L++L+ G 
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSI-----ILHILS-GK 60

Query: 61  VWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120
             +E  V  L   ANPMKL  RIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN
Sbjct: 61  HEYESVVAQL---ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120

Query: 121 MLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGT 180
           M+ KMQASMG PFVSD DDPAF QFKQITEEWTTQVQSK                     
Sbjct: 121 MVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI-------------------- 174

Query: 181 TDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQ 215
                      GEDGQEDA+  DVNKLLFSAVVQ
Sbjct: 181 -----------GEDGQEDAESSDVNKLLFSAVVQ 174

[Close]
BLAST of ClCG05G016110 vs. NCBI nr
Match: KAG6591515.1 (hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 260.0 bits (663), Expect = 1.8e-65
Identity = 145/214 (67.76%), Postives = 147/214 (68.69%), Query Frame = 0 

Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRGT 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS               
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS--------------- 60

Query: 61  VWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120
                        ANPMKL  RIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN
Sbjct: 61  -------------ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120

Query: 121 MLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGT 180
           M+ KMQASMG PFVSD DDPAF QFKQITEEWTTQVQSK                     
Sbjct: 121 MVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI-------------------- 155

Query: 181 TDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQ 215
                      GEDGQEDA+C DVNKLLFSAVVQ
Sbjct: 181 -----------GEDGQEDAECSDVNKLLFSAVVQ 155

[Close]
BLAST of ClCG05G016110 vs. NCBI nr
Match: XP_022935897.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 256.1 bits (653), Expect = 2.6e-64
Identity = 144/214 (67.29%), Postives = 146/214 (68.22%), Query Frame = 0 

Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRGT 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS               
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS--------------- 60

Query: 61  VWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120
                        ANPMKL  RIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN
Sbjct: 61  -------------ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120

Query: 121 MLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGT 180
           M+ KMQASMG PFVSD DDPAF QFKQITEEWTTQVQSK                     
Sbjct: 121 MVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI-------------------- 155

Query: 181 TDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQ 215
                      GEDGQEDA+  DVNKLLFSAVVQ
Sbjct: 181 -----------GEDGQEDAESSDVNKLLFSAVVQ 155

[Close]
BLAST of ClCG05G016110 vs. NCBI nr
Match: XP_004145489.1 (spindle and kinetochore-associated protein 2 [Cucumis sativus] >KGN55411.1 hypothetical protein Csa_012758 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 5.8e-64
Identity = 143/216 (66.20%), Postives = 154/216 (71.30%), Query Frame = 0 

Query: 1   MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRG 60
           MG+D HL QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+S              
Sbjct: 1   MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPES-------------- 60

Query: 61  TVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNR 120
                         ANPMKLVSRIKKI+DDISTLKEQCREVL+AKQDVID+ARTVL+GNR
Sbjct: 61  --------------ANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNR 120

Query: 121 NMLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGG 180
           NMLQKMQASMG+PFVSDLDDPAF++FKQITEEWTTQVQSKF                   
Sbjct: 121 NMLQKMQASMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKF------------------- 158

Query: 181 TTDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQA 216
                      +GEDGQEDADC+DVNKLLFSAVVQA
Sbjct: 181 -----------SGEDGQEDADCNDVNKLLFSAVVQA 158

[Close]
BLAST of ClCG05G016110 vs. ExPASy TrEMBL
Match: A0A6J1F6V9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.3e-64
Identity = 144/214 (67.29%), Postives = 146/214 (68.22%), Query Frame = 0 

Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRGT 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS               
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS--------------- 60

Query: 61  VWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120
                        ANPMKL  RIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN
Sbjct: 61  -------------ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120

Query: 121 MLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGT 180
           M+ KMQASMG PFVSD DDPAF QFKQITEEWTTQVQSK                     
Sbjct: 121 MVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI-------------------- 155

Query: 181 TDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQ 215
                      GEDGQEDA+  DVNKLLFSAVVQ
Sbjct: 181 -----------GEDGQEDAESSDVNKLLFSAVVQ 155

[Close]
BLAST of ClCG05G016110 vs. ExPASy TrEMBL
Match: A0A0A0L5I9 (Protein FAM33A OS=Cucumis sativus OX=3659 GN=Csa_4G651780 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.8e-64
Identity = 143/216 (66.20%), Postives = 154/216 (71.30%), Query Frame = 0 

Query: 1   MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRG 60
           MG+D HL QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+S              
Sbjct: 1   MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPES-------------- 60

Query: 61  TVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNR 120
                         ANPMKLVSRIKKI+DDISTLKEQCREVL+AKQDVID+ARTVL+GNR
Sbjct: 61  --------------ANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNR 120

Query: 121 NMLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGG 180
           NMLQKMQASMG+PFVSDLDDPAF++FKQITEEWTTQVQSKF                   
Sbjct: 121 NMLQKMQASMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKF------------------- 158

Query: 181 TTDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQA 216
                      +GEDGQEDADC+DVNKLLFSAVVQA
Sbjct: 181 -----------SGEDGQEDADCNDVNKLLFSAVVQA 158

[Close]
BLAST of ClCG05G016110 vs. ExPASy TrEMBL
Match: A0A6J1CJF1 (Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.7e-64
Identity = 142/213 (66.67%), Postives = 148/213 (69.48%), Query Frame = 0 

Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRGT 60
           MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDS               
Sbjct: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDS--------------- 60

Query: 61  VWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRN 120
                        ANPMKLVSRIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRN
Sbjct: 61  -------------ANPMKLVSRIKKIRDDISTLQEQCREILMAKQDVIDKARTVLVGNRN 120

Query: 121 MLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGT 180
           MLQKMQASMG+P VSDLDD AFAQFK+ITEEWTTQVQSK                     
Sbjct: 121 MLQKMQASMGIPLVSDLDDHAFAQFKKITEEWTTQVQSKI-------------------- 154

Query: 181 TDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVV 214
                      G+DGQEDAD +DVNKLLFSAVV
Sbjct: 181 -----------GDDGQEDADSNDVNKLLFSAVV 154

[Close]
BLAST of ClCG05G016110 vs. ExPASy TrEMBL
Match: A0A5A7VFB8 (Protein FAM33A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001430 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.4e-63
Identity = 143/216 (66.20%), Postives = 150/216 (69.44%), Query Frame = 0 

Query: 1   MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRG 60
           MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+S              
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPES-------------- 60

Query: 61  TVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNR 120
                         ANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNR
Sbjct: 61  --------------ANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNR 120

Query: 121 NMLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGG 180
           NMLQKMQASMG+PFVSDLDDPA A+FKQITEEWTTQVQSKF                   
Sbjct: 121 NMLQKMQASMGIPFVSDLDDPALAEFKQITEEWTTQVQSKF------------------- 157

Query: 181 TTDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQA 216
                       GED QEDADC +VNKLLFSAVVQA
Sbjct: 181 ------------GEDAQEDADCSNVNKLLFSAVVQA 157

[Close]
BLAST of ClCG05G016110 vs. ExPASy TrEMBL
Match: A0A1S3BUQ8 (Protein FAM33A OS=Cucumis melo OX=3656 GN=LOC103493729 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.4e-63
Identity = 143/216 (66.20%), Postives = 150/216 (69.44%), Query Frame = 0 

Query: 1   MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRG 60
           MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+S              
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPES-------------- 60

Query: 61  TVWFEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNR 120
                         ANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNR
Sbjct: 61  --------------ANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNR 120

Query: 121 NMLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGG 180
           NMLQKMQASMG+PFVSDLDDPA A+FKQITEEWTTQVQSKF                   
Sbjct: 121 NMLQKMQASMGIPFVSDLDDPALAEFKQITEEWTTQVQSKF------------------- 157

Query: 181 TTDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQA 216
                       GED QEDADC +VNKLLFSAVVQA
Sbjct: 181 ------------GEDAQEDADCSNVNKLLFSAVVQA 157

[Close]
BLAST of ClCG05G016110 vs. TAIR 10
Match: AT2G24970.1 (unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 89/210 (42.38%), Postives = 118/210 (56.19%), Query Frame = 0 

Query: 3   LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSHESIIGFLYLLNRGTVW 62
           + H H HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP                   
Sbjct: 1   MTHNH-HHQAVDNLLNVFSRASHDLTVVHSKLDKEFQQMYP------------------- 60

Query: 63  FEDGVGDLELNANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNML 122
                     NANPMKL+ RIKK+++D++ LK QC ++L AKQD+IDKA+T LVGN N++
Sbjct: 61  ---------ANANPMKLIQRIKKLQEDVTLLKHQCLDLLSAKQDLIDKAQTTLVGNCNLI 120

Query: 123 QKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTD 182
           QKM AS+G     D DD A A F QI +EWT QV+S+                T G T  
Sbjct: 121 QKMNASLGESTNGDTDD-ALADFNQIIDEWTMQVRSR----------------TVGET-- 148

Query: 183 YRIFSPHVAGEDGQEDADCDDVNKLLFSAV 213
                         EDAD +D+NK+LFSA+
Sbjct: 181 --------------EDADKEDINKMLFSAI 148

The following BLAST results are available for this feature:
BLAST of ClCG05G016110 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038898183.13.3e-6769.30spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1... [more]
KAG7024402.19.6e-6770.09hypothetical protein SDJN02_13216, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6591515.11.8e-6567.76hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022935897.12.6e-6467.29spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata][more]
XP_004145489.15.8e-6466.20spindle and kinetochore-associated protein 2 [Cucumis sativus] >KGN55411.1 hypot... [more]
BLAST of ClCG05G016110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG05G016110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F6V91.3e-6467.29Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1[more]
A0A0A0L5I92.8e-6466.20Protein FAM33A OS=Cucumis sativus OX=3659 GN=Csa_4G651780 PE=3 SV=1[more]
A0A6J1CJF13.7e-6466.67Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1[more]
A0A5A7VFB81.4e-6366.20Protein FAM33A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00143... [more]
A0A1S3BUQ81.4e-6366.20Protein FAM33A OS=Cucumis melo OX=3656 GN=LOC103493729 PE=3 SV=1[more]
BLAST of ClCG05G016110 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G24970.11.2e-3542.38unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.250.1380coord: 10..58
e-value: 3.4E-7
score: 32.1
coord: 62..153
e-value: 3.9E-14
score: 54.5
IPR042091Ska2, N-terminalPFAMPF16740SKA2coord: 73..146
e-value: 1.1E-23
score: 83.1
coord: 10..46
e-value: 1.2E-11
score: 44.4
IPR026762Spindle and kinetochore-associated protein 2PANTHERPTHR32017SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2coord: 12..56
coord: 73..214

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G016110.2ClCG05G016110.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0007059 chromosome segregation
biological_process GO:0000278 mitotic cell cycle
cellular_component GO:0000940 outer kinetochore
cellular_component GO:0005876 spindle microtubule
molecular_function GO:0008017 microtubule binding