ClCG05G012050 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G012050
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein rough sheath 2 homolog
Location	CG_Chr05: 15111124 .. 15112275 (-)
RNA-Seq Expression	ClCG05G012050
Synteny	ClCG05G012050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGACCGCCAGCGCTGGCAGCCTGAAGAAGACGCCCTCCTCCGAGCCTACGTCAAGCAATATGGCCCTAAAGAATGGAATCTCATCTCTCACCGTATGCCCACCCCTCTCCATCGCGATCCTAAATCCTGCCTCGAGCGCTGGAAGAATTACCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAAGAGCAGTCTCTTGTTATCTCTCTTCAGGCTAAGTACGGCAATAAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTCAAAGAGAAGCAGCTTAAGCAGTTGCAGAAGGCGCAGAACTTAACCCAGAGGCGGGATTATCACACTTCCGCCGACGGGAATATTCCCATTGCTGCTGCTGTTTCCTCCCCCGAGAAGGCGCTTCAAGGTCCTTACGACCATATCTTAGAGACCTTCGCTGAGAAATACGTTCAGCCTAAGCTTTACGCCGCTGCCTTTCACTCTCCTCCTCCCCCGCCTCCGTCGCCCTTGGCTAACGTCATGCCTCGTCTTCCCATCCCTGACGCCGATCCGCTCCTTTCCCTTGGATCGGTCAGTTCCACGACGTCGTCTTCCACTGTTCTTCCTCTCTGGATGAACATTAACTCCACCAGCACCGCTTCCTCTTCCACCTCCTCAACCACGCCGTCGCCGTCGGTGAGCCTCACGCTATCTCCCTCTGAACCACCCTCTCTGGACTCGGAAGTGAACCGGATGGGAGCCCTAATCCAGTACTGCAAGGACCTGGAAGAGGGGCGGCAGAGTTGGATTCAGCACAAGAAGGAAGCCACATGGCGACTGAATCGATTAGAGCAACAGCTGGAATCAGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAGGAGATGGAAGCGAAAATAGAGAGGTTAAGAGAGGAAGAAAGAGCTTATTTAGGGCGAATCGAGAGCGATTACAGAGAACAGTTGAATGCTCTGCAGAGAGATGCGGAGTGTAAAGAGGCGAAGCTGATGGAAGCTTGGTGCAGCAAACATGCGAAATTGGCGAAGCTTGTGGAGAAAATTGGAGGTCAAGGACATGGGTTGATGGTTGTTGGTGCTGGTAATTCGAAGGATATCGTCCATTGA

mRNA sequence

ATGAAGGACCGCCAGCGCTGGCAGCCTGAAGAAGACGCCCTCCTCCGAGCCTACGTCAAGCAATATGGCCCTAAAGAATGGAATCTCATCTCTCACCGTATGCCCACCCCTCTCCATCGCGATCCTAAATCCTGCCTCGAGCGCTGGAAGAATTACCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAAGAGCAGTCTCTTGTTATCTCTCTTCAGGCTAAGTACGGCAATAAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTCAAAGAGAAGCAGCTTAAGCAGTTGCAGAAGGCGCAGAACTTAACCCAGAGGCGGGATTATCACACTTCCGCCGACGGGAATATTCCCATTGCTGCTGCTGTTTCCTCCCCCGAGAAGGCGCTTCAAGGTCCTTACGACCATATCTTAGAGACCTTCGCTGAGAAATACGTTCAGCCTAAGCTTTACGCCGCTGCCTTTCACTCTCCTCCTCCCCCGCCTCCGTCGCCCTTGGCTAACGTCATGCCTCGTCTTCCCATCCCTGACGCCGATCCGCTCCTTTCCCTTGGATCGGTCAGTTCCACGACGTCGTCTTCCACTGTTCTTCCTCTCTGGATGAACATTAACTCCACCAGCACCGCTTCCTCTTCCACCTCCTCAACCACGCCGTCGCCGTCGGTGAGCCTCACGCTATCTCCCTCTGAACCACCCTCTCTGGACTCGGAAGTGAACCGGATGGGAGCCCTAATCCAGTACTGCAAGGACCTGGAAGAGGGGCGGCAGAGTTGGATTCAGCACAAGAAGGAAGCCACATGGCGACTGAATCGATTAGAGCAACAGCTGGAATCAGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAGGAGATGGAAGCGAAAATAGAGAGGTTAAGAGAGGAAGAAAGAGCTTATTTAGGGCGAATCGAGAGCGATTACAGAGAACAGTTGAATGCTCTGCAGAGAGATGCGGAGTGTAAAGAGGCGAAGCTGATGGAAGCTTGGTGCAGCAAACATGCGAAATTGGCGAAGCTTGTGGAGAAAATTGGAGGTCAAGGACATGGGTTGATGGTTGTTGGTGCTGGTAATTCGAAGGATATCGTCCATTGA

Coding sequence (CDS)

ATGAAGGACCGCCAGCGCTGGCAGCCTGAAGAAGACGCCCTCCTCCGAGCCTACGTCAAGCAATATGGCCCTAAAGAATGGAATCTCATCTCTCACCGTATGCCCACCCCTCTCCATCGCGATCCTAAATCCTGCCTCGAGCGCTGGAAGAATTACCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAAGAGCAGTCTCTTGTTATCTCTCTTCAGGCTAAGTACGGCAATAAGTGGAAGAAGATCGCCGCCGAGGTCCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTCAAAGAGAAGCAGCTTAAGCAGTTGCAGAAGGCGCAGAACTTAACCCAGAGGCGGGATTATCACACTTCCGCCGACGGGAATATTCCCATTGCTGCTGCTGTTTCCTCCCCCGAGAAGGCGCTTCAAGGTCCTTACGACCATATCTTAGAGACCTTCGCTGAGAAATACGTTCAGCCTAAGCTTTACGCCGCTGCCTTTCACTCTCCTCCTCCCCCGCCTCCGTCGCCCTTGGCTAACGTCATGCCTCGTCTTCCCATCCCTGACGCCGATCCGCTCCTTTCCCTTGGATCGGTCAGTTCCACGACGTCGTCTTCCACTGTTCTTCCTCTCTGGATGAACATTAACTCCACCAGCACCGCTTCCTCTTCCACCTCCTCAACCACGCCGTCGCCGTCGGTGAGCCTCACGCTATCTCCCTCTGAACCACCCTCTCTGGACTCGGAAGTGAACCGGATGGGAGCCCTAATCCAGTACTGCAAGGACCTGGAAGAGGGGCGGCAGAGTTGGATTCAGCACAAGAAGGAAGCCACATGGCGACTGAATCGATTAGAGCAACAGCTGGAATCAGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAGGAGATGGAAGCGAAAATAGAGAGGTTAAGAGAGGAAGAAAGAGCTTATTTAGGGCGAATCGAGAGCGATTACAGAGAACAGTTGAATGCTCTGCAGAGAGATGCGGAGTGTAAAGAGGCGAAGCTGATGGAAGCTTGGTGCAGCAAACATGCGAAATTGGCGAAGCTTGTGGAGAAAATTGGAGGTCAAGGACATGGGTTGATGGTTGTTGGTGCTGGTAATTCGAAGGATATCGTCCATTGA

Protein sequence

MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKGSLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQRRDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPLANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTLSPSEPPSLDSEVNRMGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEKARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHAKLAKLVEKIGGQGHGLMVVGAGNSKDIVH

Homology

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BLAST of ClCG05G012050 vs. NCBI nr
Match: XP_038907190.1 (protein rough sheath 2 homolog [Benincasa hispida])

HSP 1 Score: 674.5 bits (1739), Expect = 5.5e-190
Identity = 359/390 (92.05%), Postives = 370/390 (94.87%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RMP PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVFKEKQLKQLQKAQNLTQR
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLQKAQNLTQR 120

Query: 121 RDYHTSA-DGN-IPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLY----AAAFHSP-P 180
           RDY TSA DGN IPIAA VSSPEKALQGPYDHILETFAEKYVQPKLY    AAAF SP P
Sbjct: 121 RDYQTSAVDGNIIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAATAAAFQSPHP 180

Query: 181 PPPPSPLANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPS 240
           PPPPSPLANVMPRLPIPDADP+LSLGSVSSTTS+STVLPLWMN+NSTSTASSSTSSTTPS
Sbjct: 181 PPPPSPLANVMPRLPIPDADPVLSLGSVSSTTSTSTVLPLWMNVNSTSTASSSTSSTTPS 240

Query: 241 PSVSLTLSPSEPPSLDSEVNRMGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESE 300
           PSVSLTLSPSEP SLD EVNR+GAL+QYCK++EEGRQSW+QHKKEATWRLNRLEQQLESE
Sbjct: 241 PSVSLTLSPSEPASLDLEVNRIGALVQYCKEMEEGRQSWVQHKKEATWRLNRLEQQLESE 300

Query: 301 KARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKH 360
           KARKKREKMEEMEAKI+RLREEERAYLGRIESDYREQLNALQRDA+CKEAKLMEAWCSKH
Sbjct: 301 KARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKH 360

Query: 361 AKLAKLVEKIGGQGHGLMVVGAGNSKDIVH 384
           AKL KLVEKIG QGHGL+VV A NSKDI H
Sbjct: 361 AKLTKLVEKIGVQGHGLVVVSA-NSKDIGH 389

[Close]

BLAST of ClCG05G012050 vs. NCBI nr
Match: XP_023525837.1 (protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 640.2 bits (1650), Expect = 1.1e-179
Identity = 338/389 (86.89%), Postives = 360/389 (92.54%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLS EEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKAQNLTQR
Sbjct: 61  SLSAEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
           RDY  S DGN+ I + VSSPEKALQGPYDHILETFAEKYVQPKLY+AAF SPPPPPP PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPP-PL 180

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
           ANVMPRLP+PDADP+LSLGSV+STTSSSTVLPLWMN+NSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANVMPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPPSLDSEVNR------MGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR      MGAL+ YCK+LEEGRQSW+QHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQSWLQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHA 360
           ARKKREKMEEMEAKI RLREEE AYLGRIESDYREQ++A++RDAE KEAKL+EAWCSKH 
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQGHGLMVVGAGNSKDIVH 384
           KL KLVE+IG QG GL+VV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQGQGLVVVAAGNSKDMIH 386

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BLAST of ClCG05G012050 vs. NCBI nr
Match: KAG7036747.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 638.6 bits (1646), Expect = 3.3e-179
Identity = 337/389 (86.63%), Postives = 359/389 (92.29%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
           RDY  S DGN+ I + VSSPEKALQGPYDHILETFAEKYVQPKLY+AAF SPPPPP  PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPP--PL 180

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
           ANVMPRLP+PDADP+LSLGSV+STTSSSTVLPLWMN+NSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANVMPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPPSLDSEVNR------MGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR      MGAL+ YCK+LEEGRQ W+QHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHA 360
           ARKKREKMEEMEAKI RLREEE AYLGRIESDYREQ++A++RDAE KEAKL+EAWCSKH 
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQGHGLMVVGAGNSKDIVH 384
           KL KLVE+IG QG GL+VV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQGQGLVVVAAGNSKDMIH 385

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BLAST of ClCG05G012050 vs. NCBI nr
Match: XP_022949284.1 (protein rough sheath 2 homolog [Cucurbita moschata])

HSP 1 Score: 634.0 bits (1634), Expect = 8.2e-178
Identity = 335/389 (86.12%), Postives = 358/389 (92.03%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
           RDY  S DGN+ I + VSSPEKALQGPYDHILETFAEKYVQPKLY+AAF SPPPPP  PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPP--PL 180

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
           ANVMPRLP+PDADP+LSLGSV+STTSSSTVLPLWMN+NSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANVMPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPPSLDSEVNR------MGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR      MGAL+ YCK+LEEGRQ W+QHKKEATWRL RLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHA 360
           ARKKREKMEEMEAKI RLREEE AYLGRIESDYREQ++A++RDAE KEAKL+EAWCSKH 
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQGHGLMVVGAGNSKDIVH 384
           KL KLVE+IG QG GL+VV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQGQGLVVVAAGNSKDMIH 385

[Close]

BLAST of ClCG05G012050 vs. NCBI nr
Match: XP_022997764.1 (protein rough sheath 2 homolog [Cucurbita maxima])

HSP 1 Score: 629.8 bits (1623), Expect = 1.5e-176
Identity = 334/389 (85.86%), Postives = 357/389 (91.77%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
           RDY  S DGN+ I + VSSPEKALQGPYDHILETFAEKYVQPKLY+ AF SPPPPP  PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPP--PL 180

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
           AN+MPRLP+PDADP+LSLGSV+STTSSS VLPLWMN+NSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANLMPRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPPSLDSEVNR------MGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR      MGAL+ YCK+LEEGRQ W+QHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHA 360
           ARKKREKMEEMEAKI RLREEE AYLGRIESDYREQ++A++RDAE KEAKL+EAWCSKH 
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQGHGLMVVGAGNSKDIVH 384
           KL KLVE+IG QG GL+VV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQGQGLVVV-AGNSKDMIH 384

[Close]

BLAST of ClCG05G012050 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 9.4e-76
Identity = 169/368 (45.92%), Postives = 231/368 (62.77%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           M++RQRW+PEEDA+L AYV+QYGP+EW+L+S RM  PLHRD KSCLERWKNYL+PG+KKG
Sbjct: 6   MRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKG 65

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SL+ +EQ LVI LQAK+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++L+       R
Sbjct: 66  SLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRD----RDR 125

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
           R      DG+    A          G YD +LE FA+K V                    
Sbjct: 126 RRLPPPLDGDERGCAG---------GRYDWLLEDFADKLVNDH----------------- 185

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
                                     ++ +LP WM  +S+ ++SSS S T    S ++  
Sbjct: 186 ---------------------HRRMMAAPILPPWM--SSSPSSSSSPSVTLSLASAAVAP 245

Query: 241 SPSEPPSL-----DSEVNRMGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEKA 300
           +P+ PP         EV  +  L++ C+++EEG+++W  H+KEA WR+ R+E QLE+E+A
Sbjct: 246 APAAPPPTWGGGGGGEV-VVAELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERA 305

Query: 301 RKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHAK 360
            ++RE  EE EAK+  LREE+ A + R+E++YRE++  L+RDAE KE K+ E W +KHA+
Sbjct: 306 CRRREATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHAR 319

Query: 361 LAKLVEKI 364
           LAK ++++
Sbjct: 366 LAKFLDQV 319

[Close]

BLAST of ClCG05G012050 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-74
Identity = 178/384 (46.35%), Postives = 236/384 (61.46%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW+PEEDA+LRAYV+QYGP+EW+L+S RM   L RD KSCLERWKNYL+PG+KKG
Sbjct: 1   MKERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SL+ EEQ LVI LQAK+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++L+ ++     
Sbjct: 61  SLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDSRR---- 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYV--QPKLYAAA-----FHSPP 180
                              P    +G Y+ +LE FAEK V  +P+  AAA       +P 
Sbjct: 121 ---------------PPPEPSPDERGRYEWLLENFAEKLVGERPQQAAAAPSPLLMAAPV 180

Query: 181 PPP------------PSPLANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTS 240
            PP             + +A+  PR P P     LSL S +         P WM      
Sbjct: 181 LPPWLSSNAGPAAAAAAAVAHPPPRPPSPSV--TLSLASAAVAPGPPAPAP-WM---PDR 240

Query: 241 TASSSTSSTTPSPSVSLTLSPSEPPSLDSEVNRMGALIQYCKDLEEGRQSWIQHKKEATW 300
            A+ +     PSPS     +P     +D +   +  L + C++LEEGR++W  H++EA W
Sbjct: 241 AAADAAPYGFPSPSQHGGAAPPGMAVVDGQA--LAELAECCRELEEGRRAWAAHRREAAW 300

Query: 301 RLNRLEQQLESEKARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECK 360
           RL R+EQQLE E+  ++RE  EE EAK+  +R E+ A   R+E D+RE++  L+RDA+ K
Sbjct: 301 RLKRVEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVK 357

Query: 361 EAKLMEAWCSKHAKLAKLVEKIGG 366
           E K+ E W +KHA++AK VE++GG
Sbjct: 361 EEKMAEQWAAKHARVAKFVEQMGG 357

[Close]

BLAST of ClCG05G012050 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 8.8e-74
Identity = 182/387 (47.03%), Postives = 235/387 (60.72%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S RM  PL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++ +++    + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEP 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQ------PKLYAAA------ 180
            D                      +  YD ILE+FAEK V+      P   AAA      
Sbjct: 121 ID----------------------ESKYDRILESFAEKLVKERSNVVPAAAAAATVVMAN 180

Query: 181 -----FHS----PPPPPPSP--LANVMPRLPIPDADPLLSLGSVSSTTSSSTVLP--LWM 240
                 HS     PP P  P  LA       +    P ++L    ST +++   P   W+
Sbjct: 181 SNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPIPWL 240

Query: 241 NINSTSTASSSTSSTTPSPSVSLTLSPSEPPSLDSEVNRMGALIQYCKDLEEGRQSWIQH 300
                  A +      P   V  ++ PS   S  SE   +  L++ C++LEEG ++W  H
Sbjct: 241 QQQQPERAENG-----PGGLVLGSMMPS--CSGSSESVFLSELVECCRELEEGHRAWADH 300

Query: 301 KKEATWRLNRLEQQLESEKARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQ 360
           KKEA WRL RLE QLESEK  ++REKMEE+EAK++ LREE++  + +IE +YREQL  L+
Sbjct: 301 KKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLR 358

Query: 361 RDAECKEAKLMEAWCSKHAKLAKLVEK 363
           RDAE K+ KL + W S+H +L K +E+
Sbjct: 361 RDAEAKDQKLADQWTSRHIRLTKFLEQ 358

[Close]

BLAST of ClCG05G012050 vs. ExPASy Swiss-Prot
Match: B3VTV7 (Transcription factor MYB60 OS=Vitis vinifera OX=29760 GN=MYB60 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.3e-20
Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W PEED +L +Y++++GP  W  +     T L R  KSC  RW NYL+PG+K+G+ +P E
Sbjct: 17  WTPEEDIILVSYIQEHGPGNWRSVPTN--TGLLRCSKSCRLRWTNYLRPGIKRGNFTPHE 76

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQRRDYHTS 126
           + ++I LQA  GNKW  IA+ +P RT   +  +W    +K++K+ Q A +     D  TS
Sbjct: 77  EGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKIKKFQSALSPHMASDSTTS 136

Query: 127 ADGN 131
              N
Sbjct: 137 TCTN 138

[Close]

BLAST of ClCG05G012050 vs. ExPASy Swiss-Prot
Match: Q9LTF7 (Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.6e-19
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W+PEED +L++YV+ +G   W  IS R  + L R  KSC  RWKNYL+P +K+GS+S
Sbjct: 14  RGLWKPEEDMILKSYVETHGEGNWADISRR--SGLKRGGKSCRLRWKNYLRPNIKRGSMS 73

Query: 64  PEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 108
           P+EQ L+I +    GN+W  IA  +PGRT   +  +W     K+
Sbjct: 74  PQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115

[Close]

BLAST of ClCG05G012050 vs. ExPASy TrEMBL
Match: A0A6J1GCE3 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452685 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 4.0e-178
Identity = 335/389 (86.12%), Postives = 358/389 (92.03%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
           RDY  S DGN+ I + VSSPEKALQGPYDHILETFAEKYVQPKLY+AAF SPPPPP  PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPP--PL 180

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
           ANVMPRLP+PDADP+LSLGSV+STTSSSTVLPLWMN+NSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANVMPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPPSLDSEVNR------MGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR      MGAL+ YCK+LEEGRQ W+QHKKEATWRL RLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHA 360
           ARKKREKMEEMEAKI RLREEE AYLGRIESDYREQ++A++RDAE KEAKL+EAWCSKH 
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQGHGLMVVGAGNSKDIVH 384
           KL KLVE+IG QG GL+VV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQGQGLVVVAAGNSKDMIH 385

[Close]

BLAST of ClCG05G012050 vs. ExPASy TrEMBL
Match: A0A6J1KCH4 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492624 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 7.5e-177
Identity = 334/389 (85.86%), Postives = 357/389 (91.77%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
           RDY  S DGN+ I + VSSPEKALQGPYDHILETFAEKYVQPKLY+ AF SPPPPP  PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPP--PL 180

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
           AN+MPRLP+PDADP+LSLGSV+STTSSS VLPLWMN+NSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANLMPRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPPSLDSEVNR------MGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR      MGAL+ YCK+LEEGRQ W+QHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHA 360
           ARKKREKMEEMEAKI RLREEE AYLGRIESDYREQ++A++RDAE KEAKL+EAWCSKH 
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQGHGLMVVGAGNSKDIVH 384
           KL KLVE+IG QG GL+VV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQGQGLVVV-AGNSKDMIH 384

[Close]

BLAST of ClCG05G012050 vs. ExPASy TrEMBL
Match: A0A6J1IZB3 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.5e-174
Identity = 332/389 (85.35%), Postives = 351/389 (90.23%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQK QNLTQR
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKTQNLTQR 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
            DY  S DGNIPI   VSSPEKA+QGPYDHILETFAEKYVQPK+YAAAF SPPPPPP   
Sbjct: 121 HDYQNS-DGNIPI-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPPP-- 180

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
               PRL +P+ADP+LSLGSVSSTTSS TVLPLWMN NSTSTASSST STTPSPSVSLTL
Sbjct: 181 ----PRLSVPEADPVLSLGSVSSTTSSPTVLPLWMNANSTSTASSSTVSTTPSPSVSLTL 240

Query: 241 SPSEPPSLDSEVNR------MGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEK 300
           SPSEP   ++EVNR      MGAL+QYCKDLEEGRQSW+QHKKEATWRLNRLE+QLESEK
Sbjct: 241 SPSEPAINETEVNRILPVQQMGALVQYCKDLEEGRQSWVQHKKEATWRLNRLEKQLESEK 300

Query: 301 ARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHA 360
           ARKKREKMEEMEAKI+RLREEE AYLGRIESDYREQL+ALQRDA+ KEAKL+E+WCSKHA
Sbjct: 301 ARKKREKMEEMEAKIQRLREEESAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHA 360

Query: 361 KLAKLVEKIGGQGHGLMVVGAGNSKDIVH 384
           KLAKLVEK G QGHGL++V  GNSKDIVH
Sbjct: 361 KLAKLVEKYGVQGHGLVMV-TGNSKDIVH 380

[Close]

BLAST of ClCG05G012050 vs. ExPASy TrEMBL
Match: A0A6J1FAF4 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.7e-173
Identity = 329/389 (84.58%), Postives = 351/389 (90.23%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKP LKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPDLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVF+EKQLKQLQK QNLTQR
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFREKQLKQLQKTQNLTQR 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
           RDY  S DGNIP+   VSSPEKA+QGPYDHILETFAEKYVQPK+YAAAF SPPPP     
Sbjct: 121 RDYQNS-DGNIPV-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPP----- 180

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
               PRL +P+ADP+LSLGSVSSTTSS TVLPLWMN+NSTSTASSST+STTPSPSVSLTL
Sbjct: 181 ----PRLSVPEADPVLSLGSVSSTTSSPTVLPLWMNVNSTSTASSSTASTTPSPSVSLTL 240

Query: 241 SPSEPPSLDSEVNR------MGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEK 300
           SPSEP  L+SEVNR      MGAL+QYCKDLEEGRQ+W+QHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPAILESEVNRILPVQQMGALVQYCKDLEEGRQNWVQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHA 360
           ARKKREKMEEMEAKI+RLREEE AYLGRIESDYREQL+ALQRDA+ KEAKL+E+WCSKHA
Sbjct: 301 ARKKREKMEEMEAKIQRLREEEMAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHA 360

Query: 361 KLAKLVEKIGGQGHGLMVVGAGNSKDIVH 384
           KLAKLVEK G QGHGL++V  GNS DIVH
Sbjct: 361 KLAKLVEKYGVQGHGLVMV-TGNSNDIVH 377

[Close]

BLAST of ClCG05G012050 vs. ExPASy TrEMBL
Match: A0A5D3CNU9 (Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold90G00170 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 3.3e-164
Identity = 314/383 (81.98%), Postives = 336/383 (87.73%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMP PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVFKEKQLKQL KA NLTQ 
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFHSPPPPPPSPL 180
               +S D N+PI+ AVSSPEKALQGPYDHILETFAEKYVQPKLY           P P 
Sbjct: 121 ----SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY-----------PHP- 180

Query: 181 ANVMPRLPIPDADPLLSLGSVSSTTSSSTVLPLWMNINSTSTASSSTSSTTPSPSVSLTL 240
                 +PIPDADPLLSLGSV+STTSSST+LPLWMN+NSTSTASSST STTPSPSVSLTL
Sbjct: 181 ------IPIPDADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTL 240

Query: 241 SPSEPPSLDSEVNRMGALIQYCKDLEEGRQSWIQHKKEATWRLNRLEQQLESEKARKKRE 300
           SPSEP  L+SEVNR+GAL+QYCK++EEGRQSW+QHKKEA+WRLNRLEQQLESEKARKKRE
Sbjct: 241 SPSEPGCLESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKRE 300

Query: 301 KMEEMEAKIERLREEERAYLGRIESDYREQLNALQRDAECKEAKLMEAWCSKHAKLAKLV 360
           KMEEMEAKI+RLREEER YLG IE DY+EQLNALQR+A+CKEAKL+E WC+KH+KL KLV
Sbjct: 301 KMEEMEAKIQRLREEERVYLGGIERDYKEQLNALQREADCKEAKLVEDWCNKHSKLVKLV 354

Query: 361 EKIGGQGHGLMVVGAGNSKDIVH 384
           EK G  GHGL+    G SKDIVH
Sbjct: 361 EKFG--GHGLL----GVSKDIVH 354

[Close]

BLAST of ClCG05G012050 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 278.9 bits (712), Expect = 6.2e-75
Identity = 182/387 (47.03%), Postives = 235/387 (60.72%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S RM  PL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQNLTQR 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++ +++    + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEP 120

Query: 121 RDYHTSADGNIPIAAAVSSPEKALQGPYDHILETFAEKYVQ------PKLYAAA------ 180
            D                      +  YD ILE+FAEK V+      P   AAA      
Sbjct: 121 ID----------------------ESKYDRILESFAEKLVKERSNVVPAAAAAATVVMAN 180

Query: 181 -----FHS----PPPPPPSP--LANVMPRLPIPDADPLLSLGSVSSTTSSSTVLP--LWM 240
                 HS     PP P  P  LA       +    P ++L    ST +++   P   W+
Sbjct: 181 SNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPIPWL 240

Query: 241 NINSTSTASSSTSSTTPSPSVSLTLSPSEPPSLDSEVNRMGALIQYCKDLEEGRQSWIQH 300
                  A +      P   V  ++ PS   S  SE   +  L++ C++LEEG ++W  H
Sbjct: 241 QQQQPERAENG-----PGGLVLGSMMPS--CSGSSESVFLSELVECCRELEEGHRAWADH 300

Query: 301 KKEATWRLNRLEQQLESEKARKKREKMEEMEAKIERLREEERAYLGRIESDYREQLNALQ 360
           KKEA WRL RLE QLESEK  ++REKMEE+EAK++ LREE++  + +IE +YREQL  L+
Sbjct: 301 KKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLR 358

Query: 361 RDAECKEAKLMEAWCSKHAKLAKLVEK 363
           RDAE K+ KL + W S+H +L K +E+
Sbjct: 361 RDAEAKDQKLADQWTSRHIRLTKFLEQ 358

[Close]

BLAST of ClCG05G012050 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-20
Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  EED LL  Y+   G   WNL++    + L R  KSC  RW NYLKP +K+G+L+P+E
Sbjct: 23  WTLEEDTLLTNYISHNGEGRWNLLA--KSSGLKRAGKSCRLRWLNYLKPDIKRGNLTPQE 82

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAQN 117
           Q L++ L +K+GN+W KI+  +PGRT   +  +W    +KQ +QL    N
Sbjct: 83  QLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSN 130

[Close]

BLAST of ClCG05G012050 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-20
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W+PEED +L++YV+ +G   W  IS R  + L R  KSC  RWKNYL+P +K+GS+S
Sbjct: 14  RGLWKPEEDMILKSYVETHGEGNWADISRR--SGLKRGGKSCRLRWKNYLRPNIKRGSMS 73

Query: 64  PEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 108
           P+EQ L+I +    GN+W  IA  +PGRT   +  +W     K+
Sbjct: 74  PQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115

[Close]

BLAST of ClCG05G012050 vs. TAIR 10
Match: AT4G26930.1 (myb domain protein 97 )

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-20
Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W   ED  L AYV++YG   WN +  +  T L R  KSC  RW N+L+P L+KGS +PEE
Sbjct: 24  WTVAEDETLAAYVREYGEGNWNSVQKK--TWLARCGKSCRLRWANHLRPNLRKGSFTPEE 83

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQK----------AQN 126
           + L+I L ++ GNKW ++AA++PGRT   +  +W      +LK+ Q+          +QN
Sbjct: 84  ERLIIQLHSQLGNKWARMAAQLPGRTDNEIKNYWNT----RLKRFQRQGLPLYPPEYSQN 143

Query: 127 LTQRRDYHTSADGNIPIAAAVSS 140
             Q++ Y       +P     SS
Sbjct: 144 NHQQQMYPQQPSSPLPSQTPASS 160

[Close]

BLAST of ClCG05G012050 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 96.7 bits (239), Expect = 4.4e-20
Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  EED LL  YV+ +G   WN +S      L R+ KSC  RW NYL+P LK+G ++P E
Sbjct: 11  WTAEEDRLLIEYVRVHGEGRWNSVSKL--AGLKRNGKSCRLRWVNYLRPDLKRGQITPHE 70

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEV-FKEKQLKQLQKAQNLTQR 121
           +S+++ L AK+GN+W  IA  +PGRT   +  +W   FK+K       A+ +  R
Sbjct: 71  ESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNNAEKIKSR 123

The following BLAST results are available for this feature:

BLAST of ClCG05G012050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907190.1	5.5e-190	92.05	protein rough sheath 2 homolog [Benincasa hispida]	[more]
XP_023525837.1	1.1e-179	86.89	protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo]	[more]
KAG7036747.1	3.3e-179	86.63	Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022949284.1	8.2e-178	86.12	protein rough sheath 2 homolog [Cucurbita moschata]	[more]
XP_022997764.1	1.5e-176	85.86	protein rough sheath 2 homolog [Cucurbita maxima]	[more]

BLAST of ClCG05G012050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94IB1	9.4e-76	45.92	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q9S7B2	1.4e-74	46.35	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]
O80931	8.8e-74	47.03	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
B3VTV7	4.3e-20	39.52	Transcription factor MYB60 OS=Vitis vinifera OX=29760 GN=MYB60 PE=2 SV=1	[more]
Q9LTF7	1.6e-19	44.23	Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1	[more]

BLAST of ClCG05G012050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCE3	4.0e-178	86.12	protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452685 PE=...	[more]
A0A6J1KCH4	7.5e-177	85.86	protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492624 PE=4 ...	[more]
A0A6J1IZB3	3.5e-174	85.35	protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 ...	[more]
A0A6J1FAF4	1.7e-173	84.58	protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=...	[more]
A0A5D3CNU9	3.3e-164	81.98	Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of ClCG05G012050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	6.2e-75	47.03	myb-like HTH transcriptional regulator family protein	[more]
AT1G25340.1	1.2e-20	42.73	myb domain protein 116	[more]
AT5G52600.1	1.2e-20	44.23	myb domain protein 82	[more]
AT4G26930.1	3.4e-20	37.06	myb domain protein 97	[more]
AT4G13480.1	4.4e-20	40.87	myb domain protein 79	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 324..344
None	No IPR available	COILS	Coil	Coil	coord: 381..383
None	No IPR available	COILS	Coil	Coil	coord: 276..322
None	No IPR available	GENE3D	1.10.10.60		coord: 62..124 e-value: 3.7E-11 score: 44.7
None	No IPR available	GENE3D	1.10.10.60		coord: 4..58 e-value: 1.9E-18 score: 68.2
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 7..69 e-value: 7.0E-15 score: 55.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..248
None	No IPR available	PANTHER	PTHR47214:SF1	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..369
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..369
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 58..106 e-value: 1.5E-9 score: 47.8 coord: 3..55 e-value: 4.9E-15 score: 65.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 54..104 score: 7.619142
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..53 score: 10.162258
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 6..53 e-value: 1.80478E-10 score: 53.7334
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 63..104 e-value: 1.81404E-6 score: 42.5626
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 58..108 score: 19.234663
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..57 score: 24.502167
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G012050.2	ClCG05G012050.2	mRNA