ClCG05G012020 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG05G012020
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr05: 15050494 .. 15051580 (-)
RNA-Seq Expression	ClCG05G012020
Synteny	ClCG05G012020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTTCGGCAAATCGTGGGTACATCTCTGACATGTCTCTTCGGCAAATCGTGGGTACATCTCTAACATGTCTCTTCGGCAAATCGTGGGTACTTGTGGCTCCACCTATTCGCCTTCATTATTCTTCGCCTTCATATGGTTATTACTTGTCAAGGTATTTGTCTTCAACAAATGAAATAGTGAGGTATAAGGAAAAGGCAAACAGAAAACTGTATGTTGAAGAAGAAGTTCCTCTTCCTACGACGAACAAGTATGGTGTTTGGATTCGAGGTCTTCCTGTCTCGAGTTATGAGATAGGAGTCCCTCCTCCTTCTGCAAAACGTAAACGTTCTAGAGTTGGGGTTTCTACTGAAGAAAAGGGCAAGAAAAAGTGAGTGTTTCTGCCCTAACTCTAACCGACCTTGTAGGTGTAGGAGTTGAAGTTCGTCCTAGTAAAGATGATTCCTCCTCTAGTGAGTCCTCTGGACACATGCATGATTTTATTGTTGTCGCTAGAAACCAAGGTGAAAATGTTGAGTCGGGGTCCATTATTGTTGAGGATGTTGGGGTTGTCGAAAAGGGTTTTGTTAATAAACCTAGTGTGTCTGTGATTATTTGTGGTGAGTTGAATATTCCTAAAATTGTCTTTGATGAGAAGAAGAGTGTTAGTGTTTCTGAAGTTTTTGTATCCGATAAACGAACTACTGTTGGGTCTAAGGAAGAAATGTCAAATGATTTTGTAAATCGAGGTATGTCTGAAACTATTGCTTCTGTTGTTAATTTGCCTAAGTTTTTTGATGTGGATGAGGCTACTATTGTTGGGAATGTAGCAAGTGGTACTGTGTGCCCATCTATATTATTTGGTGAAGAGAATAAGGGTTCACTTTCTAAGTGTTCTGTTGAAGTTGATGCAAAGGTTGTTGACCCATTGAGGGGTAAATATTCAGGATGTAATGTTGTTGAAGGAAATGTGCATACCTCGAGTCAAGAGATTTGTGAGGAAGCTCCTGCTTTTGCTGAAGTTGATGAAGTGGCTCATTTGAGAGCCGGTGATGATAGTGAAGATGAAGAAGTGAGACATATGGATGTCGAAGAAGGGGCTTAG

mRNA sequence

ATGTCTCTTCGGCAAATCGTGGGTGTAGGAGTTGAAGTTCGTCCTAGTAAAGATGATTCCTCCTCTAGTGAGTCCTCTGGACACATGCATGATTTTATTGTTGTCGCTAGAAACCAAGGTGAAAATGTTGAGTCGGGGTCCATTATTGTTGAGGATGTTGGGGTTGTCGAAAAGGGTTTTGTTAATAAACCTAGTGTGTCTGTGATTATTTGTGGTGAGTTGAATATTCCTAAAATTGTCTTTGATGAGAAGAAGAGTGTTAGTGTTTCTGAAGTTTTTGTATCCGATAAACGAACTACTGTTGGGTCTAAGGAAGAAATGTCAAATGATTTTGTAAATCGAGGTATGTCTGAAACTATTGCTTCTGTTGTTAATTTGCCTAAGTTTTTTGATGTGGATGAGGCTACTATTGTTGGGAATGTAGCAAGTGGTACTGTGTGCCCATCTATATTATTTGGTGAAGAGAATAAGGGTTCACTTTCTAAGTGTTCTGTTGAAGTTGATGCAAAGGTTGTTGACCCATTGAGGGGTAAATATTCAGGATGTAATGTTGTTGAAGGAAATGTGCATACCTCGAGTCAAGAGATTTGTGAGGAAGCTCCTGCTTTTGCTGAAGTTGATGAAGTGGCTCATTTGAGAGCCGGTGATGATAGTGAAGATGAAGAAGTGAGACATATGGATGTCGAAGAAGGGGCTTAG

Coding sequence (CDS)

ATGTCTCTTCGGCAAATCGTGGGTGTAGGAGTTGAAGTTCGTCCTAGTAAAGATGATTCCTCCTCTAGTGAGTCCTCTGGACACATGCATGATTTTATTGTTGTCGCTAGAAACCAAGGTGAAAATGTTGAGTCGGGGTCCATTATTGTTGAGGATGTTGGGGTTGTCGAAAAGGGTTTTGTTAATAAACCTAGTGTGTCTGTGATTATTTGTGGTGAGTTGAATATTCCTAAAATTGTCTTTGATGAGAAGAAGAGTGTTAGTGTTTCTGAAGTTTTTGTATCCGATAAACGAACTACTGTTGGGTCTAAGGAAGAAATGTCAAATGATTTTGTAAATCGAGGTATGTCTGAAACTATTGCTTCTGTTGTTAATTTGCCTAAGTTTTTTGATGTGGATGAGGCTACTATTGTTGGGAATGTAGCAAGTGGTACTGTGTGCCCATCTATATTATTTGGTGAAGAGAATAAGGGTTCACTTTCTAAGTGTTCTGTTGAAGTTGATGCAAAGGTTGTTGACCCATTGAGGGGTAAATATTCAGGATGTAATGTTGTTGAAGGAAATGTGCATACCTCGAGTCAAGAGATTTGTGAGGAAGCTCCTGCTTTTGCTGAAGTTGATGAAGTGGCTCATTTGAGAGCCGGTGATGATAGTGAAGATGAAGAAGTGAGACATATGGATGTCGAAGAAGGGGCTTAG

Protein sequence

MSLRQIVGVGVEVRPSKDDSSSSESSGHMHDFIVVARNQGENVESGSIIVEDVGVVEKGFVNKPSVSVIICGELNIPKIVFDEKKSVSVSEVFVSDKRTTVGSKEEMSNDFVNRGMSETIASVVNLPKFFDVDEATIVGNVASGTVCPSILFGEENKGSLSKCSVEVDAKVVDPLRGKYSGCNVVEGNVHTSSQEICEEAPAFAEVDEVAHLRAGDDSEDEEVRHMDVEEGA

Homology

The following BLAST results are available for this feature:

BLAST of ClCG05G012020 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG05G012020 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG05G012020 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG05G012020 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G012020.1	ClCG05G012020.1	mRNA