ClCG05G000122 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGAAGGGAGTAAAGAGAAAAGTGGGGATCCAACATGGGACCATTGCGTTAAAATAGAAGAAGGCAAAAATAGAAGACTCAAACTAAGTTGTAACTACTGGGGAAATTCTTATTGGGGAGGTACTTATAGGATTAAGCATCATCTAGCACATACTAGAAAAGATGTTGCTCCATGTAGTAAAGTTTCAGATGAGGTTCGAGATATTTTCAAGAGTTTGTTGAATGAAAATAAAAGAAATAAAGATGGAGATGATTTTCATGATGAAGATGATACCAATAGTAAAAAGAAACTTATGATGAGTGCTTTTGGTAAACGCATACACTAGTTCTGTTACCCTTAATACTATGTGGAAGAAAGGTGACAGAGAGAGTGTTTGTAGAGATATTTCTAGATTTTTGTATGCAAATGCACTTTCTTTTAATTTGGTCAAAGATCCCTACTTCAAAATTATGGTAGATTCCATTGTTTCATTTGGTCCTAGATTGAAACCTCCATCATATCATGAGGTTAGATGTACTTTTTTGAAGAAAGAGGTGGAAAGAATCAACACGGAGTTGTTAGAAAAGTATATAGCGGAAATCATCAGGATGCACATTGATGTCCGATGGTTGGACAGATGGGAAGAATCGATCAATTACAAACTTTTTAGTAAATAGTCCCAAAGACACTTTATTTCTAAAAAGTGTGGACACTTCAGGAATATACAAAAGTGCTGATAATTTGTTTGAACTACTAGATTCAGTGATAGAAGAGATTGGGGAAGATAATGTAGTTCAAGTGGTAACAGATAGTGCATCTACTTATGTCAAAGCTGGAGAAATGTCAATGGCTTAAACATAAACAACTATTTTGGTCTCCTTGTGCTGCACATTGGCCGCACATTGCTTAGACTTGATTTTATCTGATATTGGTGATATGCCCTTACATAATGATATAGTGTCTAAGGCAAGGAAAGTTACTATTTATATTTATCGACATTCTTGGGTTTTAAACCTTATGAAGAAGTATACTAAAGGGAGAGAATTGATAAGGGTTGGTGTGACACGATTTGCAACTTCTTACTTGACTTTGTGAAGCATAGCAGAAGATAAAATAGGTTTGAGAGCAATGTTTGGATCTGAAGATTGGCAAAGAAGCAACTATGCAAAGAAGTCTAACGGGGTTGAAGTAATGAAAATTATTCTTGCTAATTCAAACTTTTAGTCATCAATAAAATATTGTTTAAAATGTGTTATCTCCTTGGTAAAAGTTTTAAGACTTTTTTATGGCGATGCGAGACCTGCAATGGGCTATATATATGAAGCAATGGACAGGGCAAAGGAACAGATTGAGAAAAACTTCAACAACATTCAGAAACATTATAAACCTATTTGGGATATAATTGATGAGAGATGGGAATGCAACTTCACAGGCCCCTACATGCAGCAGCATATTATCTTAACCCAAGGTCAGAACCTATATATTAATTTTTAGAATTAGTAATTTCAATTTATTATTTTCTTTTTTTTTTTTTTTGTTACTAATTACTAATTAGGTTATAAAATTTAATACATAGGTTCCATTACGCTCCTAAATTCAATGCCAACTATGAGGTCAAGATGGGACTTATCAAACTATTCAAAGAATGTGTCCTTCACCAATGGTCAGAGAAAAGTTTGATTAGCAACTAGACCTATTCCATAATGCAGAGAATATGTTTGGAATCGATATGGCAGTACAAATGCACCACAAAAAACAACCAGGTACTAGCTTAAATTCTAGAAGGAAAGACACTAGTTAGAGTTGCAATTTTCTAAGATATTATGACTAAAATGTATGTGAATTGTATTCAAGCATTATGGTGGGAATCCTTTGGAGGAGGCTGCAAAGAGCTTCAAGATCTTGCCATTAGAATTCTTAGCTTGACTTGTAGTGCAACAGGATGTGAGAGAAATTGGAGTACATTTGATCAGGTATGGTATTATGAAAACCAAATTTCATAAAAATTAGGATTAATATTAAAATATTAACATGAATTATTTTTAGGTGCATTCAAAGAGAAGAAATTGTTTGGAACAACAAAGGTTGAGTGCGCTTGTGTTTATGAAATATAATCTTCAGTTGAAGTAAGACATAAGAAGAGAATCTTAGAAGGAGAATTATATGATCCTATTTGTCTATCGGATTTAGAATCTGACGATGAATGGATTACAAAGAAAGAAGATCCTACATTACCAAATGATAGCTCTTGGATGAATGTAAATGATTGTTTTGACATTCAAGAAATTGAGAGTAACAAAAAGAGAAGAGGGGTAATGATCTTTTTATATCTTAGTTATTATTATTTTTTTCTAAGTTATAACCTTTCCTATTTATTTTTTGATTTAGGACCTAGAGATCTATCAAAAAACTATAAGAGTGACAAAGGGAAGGAAGTTATTGAACTAGTAGAAGAAGAAAGCAATGGAGAAGAGATACATGAACAAGACAGTGGCGAACTATTAGCTGATAATGATCTCGAAGATATTGAAGTCAATAGTTGA ATGGTCGAAGGGAGTAAAGAGAAAAGTGGGGATCCAACATGGGACCATTGCGTTAAAATAGAAGAAGGCAAAAATAGAAGACTCAAACTAAGTTGTAACTACTGGGGAAATTCTTATTGGGGAGGTACTTATAGGATTAAGCATCATCTAGCACATACTAGAAAAGATGTTGCTCCATGTAGTAAAGTTTCAGATGAGGTTCGAGATATTTTCAAGAGTTTGTTGAATGAAAATAAAAGAAATAAAGATGGAGATGATTTTCATGATGAAGATGATACCAATAGTAAAAAGAAACTTATGATGAGTGCTTTTGTTTTAAGACTTTTTTATGGCGATGCGAGACCTGCAATGGGCTATATATATGAAGCAATGGACAGGGCAAAGGAACAGATTGAGAAAAACTTCAACAACATTCAGAAACATTATAAACCTATTTGGGATATAATTGATGAGAGATGGGAATGCAACTTCACAGGCCCCTACATGCAGCAGCATATTATCTTAACCCAAGAGAATATGTTTGGAATCGATATGGCAGTACAAATGCACCACAAAAAACAACCAGTTGAAGTAAGACATAAGAAGAGAATCTTAGAAGGAGAATTATATGATCCTATTTGTCTATCGGATTTAGAATCTGACGATGAATGGATTACAAAGAAAGAAGATCCTACATTACCAAATGATAGCTCTTGGATGAATGTAAATGATTGTTTTGACATTCAAGAAATTGAGAGACCTAGAGATCTATCAAAAAACTATAAGAGTGACAAAGGGAAGGAAGTTATTGAACTAGTAGAAGAAGAAAGCAATGGAGAAGAGATACATGAACAAGACAGTGGCGAACTATTAGCTGATAATGATCTCGAAGATATTGAAGTCAATAGTTGA ATGGTCGAAGGGAGTAAAGAGAAAAGTGGGGATCCAACATGGGACCATTGCGTTAAAATAGAAGAAGGCAAAAATAGAAGACTCAAACTAAGTTGTAACTACTGGGGAAATTCTTATTGGGGAGGTACTTATAGGATTAAGCATCATCTAGCACATACTAGAAAAGATGTTGCTCCATGTAGTAAAGTTTCAGATGAGGTTCGAGATATTTTCAAGAGTTTGTTGAATGAAAATAAAAGAAATAAAGATGGAGATGATTTTCATGATGAAGATGATACCAATAGTAAAAAGAAACTTATGATGAGTGCTTTTGTTTTAAGACTTTTTTATGGCGATGCGAGACCTGCAATGGGCTATATATATGAAGCAATGGACAGGGCAAAGGAACAGATTGAGAAAAACTTCAACAACATTCAGAAACATTATAAACCTATTTGGGATATAATTGATGAGAGATGGGAATGCAACTTCACAGGCCCCTACATGCAGCAGCATATTATCTTAACCCAAGAGAATATGTTTGGAATCGATATGGCAGTACAAATGCACCACAAAAAACAACCAGTTGAAGTAAGACATAAGAAGAGAATCTTAGAAGGAGAATTATATGATCCTATTTGTCTATCGGATTTAGAATCTGACGATGAATGGATTACAAAGAAAGAAGATCCTACATTACCAAATGATAGCTCTTGGATGAATGTAAATGATTGTTTTGACATTCAAGAAATTGAGAGACCTAGAGATCTATCAAAAAACTATAAGAGTGACAAAGGGAAGGAAGTTATTGAACTAGTAGAAGAAGAAAGCAATGGAGAAGAGATACATGAACAAGACAGTGGCGAACTATTAGCTGATAATGATCTCGAAGATATTGAAGTCAATAGTTGA MVEGSKEKSGDPTWDHCVKIEEGKNRRLKLSCNYWGNSYWGGTYRIKHHLAHTRKDVAPCSKVSDEVRDIFKSLLNENKRNKDGDDFHDEDDTNSKKKLMMSAFVLRLFYGDARPAMGYIYEAMDRAKEQIEKNFNNIQKHYKPIWDIIDERWECNFTGPYMQQHIILTQENMFGIDMAVQMHHKKQPVEVRHKKRILEGELYDPICLSDLESDDEWITKKEDPTLPNDSSWMNVNDCFDIQEIERPRDLSKNYKSDKGKEVIELVEEESNGEEIHEQDSGELLADNDLEDIEVNS Homology
BLAST of ClCG05G000122 vs. NCBI nr
Match: KAG5515997.1 (hypothetical protein RHGRI_036889 [Rhododendron griersonianum]) HSP 1 Score: 153.3 bits (386), Expect = 3.3e-33 Identity = 128/464 (27.59%), Postives = 176/464 (37.93%), Query Frame = 0
BLAST of ClCG05G000122 vs. NCBI nr
Match: KAG5562353.1 (hypothetical protein RHGRI_005178 [Rhododendron griersonianum]) HSP 1 Score: 150.2 bits (378), Expect = 2.8e-32 Identity = 138/506 (27.27%), Postives = 188/506 (37.15%), Query Frame = 0
BLAST of ClCG05G000122 vs. NCBI nr
Match: KAG5560764.1 (hypothetical protein RHGRI_003943 [Rhododendron griersonianum]) HSP 1 Score: 142.9 bits (359), Expect = 4.4e-30 Identity = 111/331 (33.53%), Postives = 158/331 (47.73%), Query Frame = 0
BLAST of ClCG05G000122 vs. NCBI nr
Match: KAG5564990.1 (hypothetical protein RHGRI_001011 [Rhododendron griersonianum]) HSP 1 Score: 140.2 bits (352), Expect = 2.9e-29 Identity = 147/561 (26.20%), Postives = 189/561 (33.69%), Query Frame = 0
BLAST of ClCG05G000122 vs. NCBI nr
Match: KAG5564989.1 (hypothetical protein RHGRI_001011 [Rhododendron griersonianum]) HSP 1 Score: 140.2 bits (352), Expect = 2.9e-29 Identity = 147/561 (26.20%), Postives = 189/561 (33.69%), Query Frame = 0
BLAST of ClCG05G000122 vs. ExPASy TrEMBL
Match: A0A5J5BTB2 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_019801 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.9e-26 Identity = 83/240 (34.58%), Postives = 119/240 (49.58%), Query Frame = 0
BLAST of ClCG05G000122 vs. ExPASy TrEMBL
Match: A0A7N2KYJ0 (Dimer_Tnp_hAT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 1.6e-25 Identity = 94/313 (30.03%), Postives = 132/313 (42.17%), Query Frame = 0
BLAST of ClCG05G000122 vs. ExPASy TrEMBL
Match: A0A2R6PGA0 (Myosin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc28288 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.0e-24 Identity = 97/316 (30.70%), Postives = 131/316 (41.46%), Query Frame = 0
BLAST of ClCG05G000122 vs. ExPASy TrEMBL
Match: A0A2R6PGA0 (Myosin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc28288 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 6.5e-11 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 0
HSP 2 Score: 120.9 bits (302), Expect = 8.7e-24 Identity = 75/215 (34.88%), Postives = 97/215 (45.12%), Query Frame = 0
BLAST of ClCG05G000122 vs. ExPASy TrEMBL
Match: A0A2N9IEC5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50315 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.5e-23 Identity = 74/176 (42.05%), Postives = 99/176 (56.25%), Query Frame = 0
BLAST of ClCG05G000122 vs. TAIR 10
Match: AT5G33406.1 (hAT dimerisation domain-containing protein / transposase-related ) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09 Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 0
BLAST of ClCG05G000122 vs. TAIR 10
Match: AT3G13020.1 (hAT transposon superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.9e-07 Identity = 26/73 (35.62%), Postives = 38/73 (52.05%), Query Frame = 0
BLAST of ClCG05G000122 vs. TAIR 10
Match: AT3G13030.1 (hAT transposon superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.5e-07 Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0
BLAST of ClCG05G000122 vs. TAIR 10
Match: AT3G13030.2 (hAT transposon superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.5e-07 Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0
BLAST of ClCG05G000122 vs. TAIR 10
Match: AT3G13030.3 (hAT transposon superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.5e-07 Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|